HEADER VIRAL PROTEIN 14-FEB-18 6CFG
TITLE CRYSTAL STRUCTURE OF THE A/VIETNAM/1203/2004 (H5N1) INFLUENZA VIRUS
TITLE 2 HEMAGGLUTININ IN COMPLEX WITH SMALL MOLECULE JNJ4796
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: HEMAGGLUTININ;
COMPND 3 CHAIN: A;
COMPND 4 ENGINEERED: YES;
COMPND 5 MOL_ID: 2;
COMPND 6 MOLECULE: HEMAGGLUTININ;
COMPND 7 CHAIN: B;
COMPND 8 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS (A/VIET NAM/1203/2004(H5N1));
SOURCE 3 ORGANISM_TAXID: 284218;
SOURCE 4 STRAIN: A/VIETNAM/1203/2004(H5N1);
SOURCE 5 GENE: HA;
SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI;
SOURCE 7 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER;
SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7111;
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS;
SOURCE 10 MOL_ID: 2;
SOURCE 11 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS (A/VIET NAM/1203/2004(H5N1));
SOURCE 12 ORGANISM_TAXID: 284218;
SOURCE 13 STRAIN: A/VIETNAM/1203/2004(H5N1);
SOURCE 14 GENE: HA;
SOURCE 15 EXPRESSION_SYSTEM: TRICHOPLUSIA NI;
SOURCE 16 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER;
SOURCE 17 EXPRESSION_SYSTEM_TAXID: 7111;
SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS
KEYWDS GLYCOPROTEIN, ECTODOMAIN, N-GLYCOSYLATION, VIRAL PROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR R.U.KADAM,I.A.WILSON
REVDAT 7 23-OCT-24 6CFG 1 REMARK
REVDAT 6 04-OCT-23 6CFG 1 HETSYN
REVDAT 5 29-JUL-20 6CFG 1 COMPND REMARK HETNAM LINK
REVDAT 5 2 1 SITE ATOM
REVDAT 4 18-DEC-19 6CFG 1 REMARK
REVDAT 3 10-APR-19 6CFG 1 REMARK
REVDAT 2 27-MAR-19 6CFG 1 JRNL
REVDAT 1 13-FEB-19 6CFG 0
JRNL AUTH M.J.P.VAN DONGEN,R.U.KADAM,J.JURASZEK,E.LAWSON,
JRNL AUTH 2 B.BRANDENBURG,F.SCHMITZ,W.B.G.SCHEPENS,B.STOOPS,
JRNL AUTH 3 H.A.VAN DIEPEN,M.JONGENEELEN,C.TANG,J.VERMOND,
JRNL AUTH 4 A.VAN EIJGEN-OBREGOSO REAL,S.BLOKLAND,D.GARG,W.YU,W.GOUTIER,
JRNL AUTH 5 E.LANCKACKER,J.M.KLAP,D.C.G.PEETERS,J.WU,C.BUYCK,
JRNL AUTH 6 T.H.M.JONCKERS,D.ROYMANS,P.ROEVENS,R.VOGELS,W.KOUDSTAAL,
JRNL AUTH 7 R.H.E.FRIESEN,P.RABOISSON,D.DHANAK,J.GOUDSMIT,I.A.WILSON
JRNL TITL A SMALL-MOLECULE FUSION INHIBITOR OF INFLUENZA VIRUS IS
JRNL TITL 2 ORALLY ACTIVE IN MICE.
JRNL REF SCIENCE V. 363 2019
JRNL REFN ESSN 1095-9203
JRNL PMID 30846569
JRNL DOI 10.1126/SCIENCE.AAR6221
REMARK 2
REMARK 2 RESOLUTION. 2.32 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX 1.10_2155
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : NULL
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.32
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.40
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1
REMARK 3 NUMBER OF REFLECTIONS : 39877
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.206
REMARK 3 R VALUE (WORKING SET) : 0.204
REMARK 3 FREE R VALUE : 0.241
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110
REMARK 3 FREE R VALUE TEST SET COUNT : 2036
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 40.4052 - 5.7166 1.00 2723 136 0.1872 0.2425
REMARK 3 2 5.7166 - 4.5394 1.00 2602 154 0.1626 0.1947
REMARK 3 3 4.5394 - 3.9662 1.00 2566 136 0.1501 0.1696
REMARK 3 4 3.9662 - 3.6038 1.00 2567 131 0.1796 0.2032
REMARK 3 5 3.6038 - 3.3456 1.00 2538 138 0.2248 0.2608
REMARK 3 6 3.3456 - 3.1484 1.00 2529 137 0.2258 0.2258
REMARK 3 7 3.1484 - 2.9908 1.00 2562 109 0.2307 0.2700
REMARK 3 8 2.9908 - 2.8607 1.00 2483 160 0.2544 0.3785
REMARK 3 9 2.8607 - 2.7506 1.00 2497 151 0.2439 0.2859
REMARK 3 10 2.7506 - 2.6557 1.00 2522 138 0.2423 0.2581
REMARK 3 11 2.6557 - 2.5726 1.00 2520 117 0.2540 0.3062
REMARK 3 12 2.5726 - 2.4991 1.00 2470 152 0.2640 0.3200
REMARK 3 13 2.4991 - 2.4333 1.00 2486 145 0.2917 0.3755
REMARK 3 14 2.4333 - 2.3740 0.98 2449 133 0.3052 0.3409
REMARK 3 15 2.3740 - 2.3200 0.92 2327 99 0.3352 0.3375
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : NULL
REMARK 3 SOLVENT RADIUS : 1.11
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.330
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 46.00
REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : 0.008 4249
REMARK 3 ANGLE : 0.894 5767
REMARK 3 CHIRALITY : 0.052 618
REMARK 3 PLANARITY : 0.005 748
REMARK 3 DIHEDRAL : 13.098 2550
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 1
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: ALL
REMARK 3 ORIGIN FOR THE GROUP (A): -0.4849 -41.3492 23.4752
REMARK 3 T TENSOR
REMARK 3 T11: 0.5001 T22: 0.3371
REMARK 3 T33: 0.4578 T12: -0.0883
REMARK 3 T13: -0.0751 T23: 0.0399
REMARK 3 L TENSOR
REMARK 3 L11: 0.6349 L22: 0.5795
REMARK 3 L33: 4.2560 L12: -0.1232
REMARK 3 L13: 0.1848 L23: -0.3189
REMARK 3 S TENSOR
REMARK 3 S11: -0.0734 S12: 0.2484 S13: 0.1336
REMARK 3 S21: -0.1582 S22: -0.0300 S23: 0.0115
REMARK 3 S31: -0.8180 S32: 0.3608 S33: 0.0916
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 6CFG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-FEB-18.
REMARK 100 THE DEPOSITION ID IS D_1000232661.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 19-MAY-16
REMARK 200 TEMPERATURE (KELVIN) : 80
REMARK 200 PH : NULL
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : SSRL
REMARK 200 BEAMLINE : BL12-2
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000
REMARK 200 DATA SCALING SOFTWARE : HKL-2000
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40297
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.320
REMARK 200 RESOLUTION RANGE LOW (A) : 50.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2
REMARK 200 DATA REDUNDANCY : 9.800
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : 0.08000
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 26.1000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.32
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36
REMARK 200 COMPLETENESS FOR SHELL (%) : 89.5
REMARK 200 DATA REDUNDANCY IN SHELL : 6.10
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : 0.82000
REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.100
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: 4FQI
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 68.54
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.91
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LITHIUM SULFATE, 20% W/V
REMARK 280 PEG3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277.15K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -Y,X-Y,Z
REMARK 290 3555 -X+Y,-X,Z
REMARK 290 4555 Y,X,-Z
REMARK 290 5555 X-Y,-Y,-Z
REMARK 290 6555 -X,-X+Y,-Z
REMARK 290 7555 X+2/3,Y+1/3,Z+1/3
REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3
REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3
REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3
REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3
REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3
REMARK 290 13555 X+1/3,Y+2/3,Z+2/3
REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3
REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3
REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3
REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3
REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 51.09850
REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 29.50173
REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 151.35100
REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 51.09850
REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 29.50173
REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 151.35100
REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 51.09850
REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 29.50173
REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 151.35100
REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 51.09850
REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 29.50173
REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 151.35100
REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 51.09850
REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 29.50173
REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 151.35100
REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 51.09850
REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 29.50173
REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 151.35100
REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 59.00347
REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 302.70200
REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 59.00347
REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 302.70200
REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 59.00347
REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 302.70200
REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 59.00347
REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 302.70200
REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 59.00347
REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 302.70200
REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 59.00347
REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 302.70200
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 33060 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 63640 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -90.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -51.09850
REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -88.50520
REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 51.09850
REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 -88.50520
REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000
REMARK 375
REMARK 375 SPECIAL POSITION
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL
REMARK 375 POSITIONS.
REMARK 375
REMARK 375 ATOM RES CSSEQI
REMARK 375 HOH B 335 LIES ON A SPECIAL POSITION.
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 ALA A 7
REMARK 465 GLN A 325
REMARK 465 ARG A 326
REMARK 465 GLU A 327
REMARK 465 ARG A 328
REMARK 465 ARG A 329
REMARK 465 ARG A 330
REMARK 465 LYS A 331
REMARK 465 LYS A 332
REMARK 465 ARG A 333
REMARK 465 ARG B 177
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 OG SER A 167 OD1 ASN A 244 2.13
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ARG A 62 -116.44 56.64
REMARK 500 ASP A 96 -124.74 -122.00
REMARK 500 CYS A 139 66.94 -118.25
REMARK 500 SER A 146 -155.75 -151.06
REMARK 500 GLN A 196 -58.48 62.59
REMARK 500 THR A 206 -155.89 -126.25
REMARK 500 GLU A 255 -53.87 -128.62
REMARK 500 GLU A 273 -169.80 -121.20
REMARK 500 THR B 61 65.02 -101.91
REMARK 500 ARG B 127 -135.27 58.43
REMARK 500
REMARK 500 REMARK: NULL
DBREF 6CFG A 11 333 UNP Q5EP31 Q5EP31_9INFA 17 346
DBREF 6CFG B 1 174 UNP Q6DQ18 HEMA_I02A6 339 512
SEQADV 6CFG ALA A 7 UNP Q5EP31 EXPRESSION TAG
SEQADV 6CFG ASP A 8 UNP Q5EP31 EXPRESSION TAG
SEQADV 6CFG PRO A 9 UNP Q5EP31 EXPRESSION TAG
SEQADV 6CFG GLY A 10 UNP Q5EP31 EXPRESSION TAG
SEQADV 6CFG SER B 175 UNP Q6DQ18 EXPRESSION TAG
SEQADV 6CFG GLY B 176 UNP Q6DQ18 EXPRESSION TAG
SEQADV 6CFG ARG B 177 UNP Q6DQ18 EXPRESSION TAG
SEQRES 1 A 334 ALA ASP PRO GLY ASP GLN ILE CYS ILE GLY TYR HIS ALA
SEQRES 2 A 334 ASN ASN SER THR GLU GLN VAL ASP THR ILE MET GLU LYS
SEQRES 3 A 334 ASN VAL THR VAL THR HIS ALA GLN ASP ILE LEU GLU LYS
SEQRES 4 A 334 LYS HIS ASN GLY LYS LEU CYS ASP LEU ASP GLY VAL LYS
SEQRES 5 A 334 PRO LEU ILE LEU ARG ASP CYS SER VAL ALA GLY TRP LEU
SEQRES 6 A 334 LEU GLY ASN PRO MET CYS ASP GLU PHE ILE ASN VAL PRO
SEQRES 7 A 334 GLU TRP SER TYR ILE VAL GLU LYS ALA ASN PRO VAL ASN
SEQRES 8 A 334 ASP LEU CYS TYR PRO GLY ASP PHE ASN ASP TYR GLU GLU
SEQRES 9 A 334 LEU LYS HIS LEU LEU SER ARG ILE ASN HIS PHE GLU LYS
SEQRES 10 A 334 ILE GLN ILE ILE PRO LYS SER SER TRP SER SER HIS GLU
SEQRES 11 A 334 ALA SER LEU GLY VAL SER SER ALA CYS PRO TYR GLN GLY
SEQRES 12 A 334 LYS SER SER PHE PHE ARG ASN VAL VAL TRP LEU ILE LYS
SEQRES 13 A 334 LYS ASN SER THR TYR PRO THR ILE LYS ARG SER TYR ASN
SEQRES 14 A 334 ASN THR ASN GLN GLU ASP LEU LEU VAL LEU TRP GLY ILE
SEQRES 15 A 334 HIS HIS PRO ASN ASP ALA ALA GLU GLN THR LYS LEU TYR
SEQRES 16 A 334 GLN ASN PRO THR THR TYR ILE SER VAL GLY THR SER THR
SEQRES 17 A 334 LEU ASN GLN ARG LEU VAL PRO ARG ILE ALA THR ARG SER
SEQRES 18 A 334 LYS VAL ASN GLY GLN SER GLY ARG MET GLU PHE PHE TRP
SEQRES 19 A 334 THR ILE LEU LYS PRO ASN ASP ALA ILE ASN PHE GLU SER
SEQRES 20 A 334 ASN GLY ASN PHE ILE ALA PRO GLU TYR ALA TYR LYS ILE
SEQRES 21 A 334 VAL LYS LYS GLY ASP SER THR ILE MET LYS SER GLU LEU
SEQRES 22 A 334 GLU TYR GLY ASN CYS ASN THR LYS CYS GLN THR PRO MET
SEQRES 23 A 334 GLY ALA ILE ASN SER SER MET PRO PHE HIS ASN ILE HIS
SEQRES 24 A 334 PRO LEU THR ILE GLY GLU CYS PRO LYS TYR VAL LYS SER
SEQRES 25 A 334 ASN ARG LEU VAL LEU ALA THR GLY LEU ARG ASN SER PRO
SEQRES 26 A 334 GLN ARG GLU ARG ARG ARG LYS LYS ARG
SEQRES 1 B 177 GLY LEU PHE GLY ALA ILE ALA GLY PHE ILE GLU GLY GLY
SEQRES 2 B 177 TRP GLN GLY MET VAL ASP GLY TRP TYR GLY TYR HIS HIS
SEQRES 3 B 177 SER ASN GLU GLN GLY SER GLY TYR ALA ALA ASP LYS GLU
SEQRES 4 B 177 SER THR GLN LYS ALA ILE ASP GLY VAL THR ASN LYS VAL
SEQRES 5 B 177 ASN SER ILE ILE ASP LYS MET ASN THR GLN PHE GLU ALA
SEQRES 6 B 177 VAL GLY ARG GLU PHE ASN ASN LEU GLU ARG ARG ILE GLU
SEQRES 7 B 177 ASN LEU ASN LYS LYS MET GLU ASP GLY PHE LEU ASP VAL
SEQRES 8 B 177 TRP THR TYR ASN ALA GLU LEU LEU VAL LEU MET GLU ASN
SEQRES 9 B 177 GLU ARG THR LEU ASP PHE HIS ASP SER ASN VAL LYS ASN
SEQRES 10 B 177 LEU TYR ASP LYS VAL ARG LEU GLN LEU ARG ASP ASN ALA
SEQRES 11 B 177 LYS GLU LEU GLY ASN GLY CYS PHE GLU PHE TYR HIS LYS
SEQRES 12 B 177 CYS ASP ASN GLU CYS MET GLU SER VAL ARG ASN GLY THR
SEQRES 13 B 177 TYR ASP TYR PRO GLN TYR SER GLU GLU ALA ARG LEU LYS
SEQRES 14 B 177 ARG GLU GLU ILE SER SER GLY ARG
HET NAG C 1 14
HET NAG C 2 14
HET NAG D 1 14
HET NAG D 2 14
HET NAG A 403 14
HET NAG A 404 14
HET EZ7 B 201 40
HET PEG B 204 7
HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
HETNAM EZ7 N-[2-(2-{4-[(R)-(2-METHYL-2H-TETRAZOL-5-YL)(PHENYL)
HETNAM 2 EZ7 METHYL]PIPERAZINE-1-CARBONYL}PYRIDIN-4-YL)-1,3-
HETNAM 3 EZ7 BENZOXAZOL-5-YL]ACETAMIDE
HETNAM PEG DI(HYDROXYETHYL)ETHER
HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA-
HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO-
HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE
FORMUL 3 NAG 6(C8 H15 N O6)
FORMUL 7 EZ7 C28 H27 N9 O3
FORMUL 8 PEG C4 H10 O3
FORMUL 9 HOH *93(H2 O)
HELIX 1 AA1 SER A 65 GLY A 72 1 8
HELIX 2 AA2 ASN A 73 ILE A 80 5 8
HELIX 3 AA3 ASP A 104 SER A 113 1 10
HELIX 4 AA4 PRO A 125 TRP A 127 5 5
HELIX 5 AA5 ASP A 187 GLN A 196 1 10
HELIX 6 AA6 ASP B 37 MET B 59 1 23
HELIX 7 AA7 GLU B 74 ARG B 127 1 54
HELIX 8 AA8 ASP B 145 ASN B 154 1 10
HELIX 9 AA9 ASP B 158 GLY B 176 1 19
SHEET 1 AA1 5 GLY B 31 ALA B 36 0
SHEET 2 AA1 5 TYR B 22 ASN B 28 -1 N TYR B 24 O ALA B 35
SHEET 3 AA1 5 GLN A 12 TYR A 17 -1 N CYS A 14 O HIS B 25
SHEET 4 AA1 5 CYS B 137 PHE B 140 -1 O PHE B 138 N ILE A 13
SHEET 5 AA1 5 ALA B 130 GLU B 132 -1 N LYS B 131 O GLU B 139
SHEET 1 AA2 2 GLN A 25 VAL A 26 0
SHEET 2 AA2 2 VAL A 34 THR A 35 -1 O VAL A 34 N VAL A 26
SHEET 1 AA3 2 ALA A 39 ASP A 41 0
SHEET 2 AA3 2 VAL A 315 ALA A 317 -1 O LEU A 316 N GLN A 40
SHEET 1 AA4 3 LEU A 43 GLU A 44 0
SHEET 2 AA4 3 PHE A 294 HIS A 295 1 O PHE A 294 N GLU A 44
SHEET 3 AA4 3 LYS A 307 TYR A 308 1 O LYS A 307 N HIS A 295
SHEET 1 AA5 2 LEU A 51 LEU A 54 0
SHEET 2 AA5 2 TYR A 274 THR A 279 1 O CYS A 277 N ASP A 53
SHEET 1 AA6 3 LEU A 59 ILE A 60 0
SHEET 2 AA6 3 ILE A 87 GLU A 89 1 O VAL A 88 N LEU A 59
SHEET 3 AA6 3 ILE A 267 LYS A 269 1 O MET A 268 N ILE A 87
SHEET 1 AA7 5 GLY A 100 PHE A 102 0
SHEET 2 AA7 5 ARG A 229 LEU A 237 1 O PHE A 232 N ASP A 101
SHEET 3 AA7 5 LEU A 176 HIS A 184 -1 N HIS A 184 O ARG A 229
SHEET 4 AA7 5 TYR A 256 LYS A 262 -1 O TYR A 258 N LEU A 177
SHEET 5 AA7 5 ILE A 115 GLN A 122 -1 N ILE A 121 O ALA A 257
SHEET 1 AA8 5 GLY A 100 PHE A 102 0
SHEET 2 AA8 5 ARG A 229 LEU A 237 1 O PHE A 232 N ASP A 101
SHEET 3 AA8 5 LEU A 176 HIS A 184 -1 N HIS A 184 O ARG A 229
SHEET 4 AA8 5 PHE A 251 PRO A 254 -1 O ILE A 252 N GLY A 181
SHEET 5 AA8 5 VAL A 151 TRP A 153 -1 N VAL A 152 O ALA A 253
SHEET 1 AA9 2 SER A 136 TYR A 141 0
SHEET 2 AA9 2 LYS A 144 SER A 146 -1 O LYS A 144 N TYR A 141
SHEET 1 AB1 4 ILE A 164 ASN A 169 0
SHEET 2 AB1 4 ALA A 242 SER A 247 -1 O SER A 247 N ILE A 164
SHEET 3 AB1 4 ILE A 202 GLY A 205 -1 N SER A 203 O GLU A 246
SHEET 4 AB1 4 ASN A 210 LEU A 213 -1 O GLN A 211 N VAL A 204
SHEET 1 AB2 3 GLY A 286 ALA A 287 0
SHEET 2 AB2 3 CYS A 281 THR A 283 -1 N THR A 283 O GLY A 286
SHEET 3 AB2 3 ILE A 302 GLY A 303 -1 O ILE A 302 N GLN A 282
SSBOND 1 CYS A 14 CYS B 137 1555 1555 2.05
SSBOND 2 CYS A 52 CYS A 277 1555 1555 2.05
SSBOND 3 CYS A 64 CYS A 76 1555 1555 2.05
SSBOND 4 CYS A 97 CYS A 139 1555 1555 2.05
SSBOND 5 CYS A 281 CYS A 305 1555 1555 2.05
SSBOND 6 CYS B 144 CYS B 148 1555 1555 2.05
LINK ND2 ASN A 33 C1 NAG A 403 1555 1555 1.45
LINK ND2 ASN A 169 C1 NAG C 1 1555 1555 1.43
LINK ND2 ASN A 289 C1 NAG A 404 1555 1555 1.45
LINK ND2 ASN B 154 C1 NAG D 1 1555 1555 1.45
LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.43
LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44
CRYST1 102.197 102.197 454.053 90.00 90.00 120.00 H 3 2 18
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.009785 0.005649 0.000000 0.00000
SCALE2 0.000000 0.011299 0.000000 0.00000
SCALE3 0.000000 0.000000 0.002202 0.00000