HEADER TRANSFERASE, CELL INVASION 20-FEB-18 6CGI TITLE STRUCTURE OF SALMONELLA EFFECTOR SSEK3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYPE III SECRETION SYSTEM EFFECTOR PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: RESIDUES 25-335; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA TYPHIMURIUM (STRAIN SL1344); SOURCE 3 ORGANISM_TAXID: 216597; SOURCE 4 STRAIN: SL1344; SOURCE 5 GENE: SSEK3, SL1344_1928; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SSEK3, UDP-GLCNAC, GLYCOSYLTRANSFERASE, ARGININE-MODIFICATION, KEYWDS 2 BACTERIAL EFFECTORS, TRANSFERASE, CELL INVASION EXPDTA X-RAY DIFFRACTION AUTHOR I.Y.W.CHUNG,M.CYGLER REVDAT 4 13-MAR-24 6CGI 1 REMARK REVDAT 3 06-NOV-19 6CGI 1 REMARK REVDAT 2 26-JUN-19 6CGI 1 JRNL REVDAT 1 28-FEB-18 6CGI 0 JRNL AUTH J.P.M.NEWSON,N.E.SCOTT,I.YEUK WAH CHUNG,T.WONG FOK LUNG, JRNL AUTH 2 C.GIOGHA,J.GAN,N.WANG,R.A.STRUGNELL,N.F.BROWN,M.CYGLER, JRNL AUTH 3 J.S.PEARSON,E.L.HARTLAND JRNL TITL SALMONELLA EFFECTORS SSEK1 AND SSEK3 TARGET DEATH DOMAIN JRNL TITL 2 PROTEINS IN THE TNF AND TRAIL SIGNALING PATHWAYS. JRNL REF MOL.CELL PROTEOMICS V. 18 1138 2019 JRNL REFN ESSN 1535-9484 JRNL PMID 30902834 JRNL DOI 10.1074/MCP.RA118.001093 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.36 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 56699 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2835 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.3705 - 6.2392 0.99 2757 145 0.1907 0.2135 REMARK 3 2 6.2392 - 4.9538 1.00 2721 143 0.2131 0.2367 REMARK 3 3 4.9538 - 4.3281 1.00 2707 142 0.1691 0.1845 REMARK 3 4 4.3281 - 3.9326 1.00 2686 142 0.1706 0.1887 REMARK 3 5 3.9326 - 3.6508 1.00 2718 143 0.1800 0.1907 REMARK 3 6 3.6508 - 3.4356 1.00 2688 141 0.1962 0.2046 REMARK 3 7 3.4356 - 3.2636 1.00 2690 140 0.2186 0.2690 REMARK 3 8 3.2636 - 3.1216 1.00 2674 141 0.2322 0.2927 REMARK 3 9 3.1216 - 3.0014 1.00 2709 143 0.2341 0.2558 REMARK 3 10 3.0014 - 2.8978 1.00 2696 142 0.2395 0.3019 REMARK 3 11 2.8978 - 2.8072 1.00 2687 141 0.2469 0.2872 REMARK 3 12 2.8072 - 2.7270 1.00 2687 142 0.2494 0.3030 REMARK 3 13 2.7270 - 2.6552 1.00 2661 140 0.2624 0.2986 REMARK 3 14 2.6552 - 2.5904 1.00 2682 141 0.2613 0.3437 REMARK 3 15 2.5904 - 2.5316 1.00 2673 141 0.2612 0.3017 REMARK 3 16 2.5316 - 2.4777 1.00 2683 142 0.2663 0.3236 REMARK 3 17 2.4777 - 2.4281 1.00 2709 142 0.2650 0.2913 REMARK 3 18 2.4281 - 2.3823 1.00 2669 141 0.2706 0.3015 REMARK 3 19 2.3823 - 2.3398 1.00 2659 140 0.2788 0.3671 REMARK 3 20 2.3398 - 2.3001 1.00 2708 143 0.2864 0.3558 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.200 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 9979 REMARK 3 ANGLE : 0.813 13498 REMARK 3 CHIRALITY : 0.052 1434 REMARK 3 PLANARITY : 0.003 1757 REMARK 3 DIHEDRAL : 9.137 5908 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6CGI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1000232697. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JAN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08B1-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9801 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56770 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 48.360 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.35 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.5M NACL, 0.1M TRIS PH8.5, 18% PEG REMARK 280 3350 5%MPD, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 48.08500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE AUTHOR STATES THAT THE BIOLOGICAL UNIT OF THIS PROTEIN REMARK 300 IS UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 22 REMARK 465 ASN A 23 REMARK 465 ALA A 24 REMARK 465 PRO A 25 REMARK 465 SER A 26 REMARK 465 ILE A 331 REMARK 465 SER A 332 REMARK 465 SER A 333 REMARK 465 TRP A 334 REMARK 465 ARG A 335 REMARK 465 SER B 22 REMARK 465 ASN B 23 REMARK 465 ALA B 24 REMARK 465 PRO B 25 REMARK 465 SER B 26 REMARK 465 SER B 27 REMARK 465 THR B 330 REMARK 465 ILE B 331 REMARK 465 SER B 332 REMARK 465 SER B 333 REMARK 465 TRP B 334 REMARK 465 ARG B 335 REMARK 465 SER C 22 REMARK 465 ASN C 23 REMARK 465 ALA C 24 REMARK 465 PRO C 25 REMARK 465 THR C 330 REMARK 465 ILE C 331 REMARK 465 SER C 332 REMARK 465 SER C 333 REMARK 465 TRP C 334 REMARK 465 ARG C 335 REMARK 465 SER D 22 REMARK 465 ASN D 23 REMARK 465 ALA D 24 REMARK 465 PRO D 25 REMARK 465 THR D 330 REMARK 465 ILE D 331 REMARK 465 SER D 332 REMARK 465 SER D 333 REMARK 465 TRP D 334 REMARK 465 ARG D 335 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 55 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 71 CG CD OE1 NE2 REMARK 470 GLU A 88 CG CD OE1 OE2 REMARK 470 LYS A 144 CD CE NZ REMARK 470 ARG B 55 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 144 CG CD CE NZ REMARK 470 LYS B 273 CE NZ REMARK 470 GLN C 72 CG CD OE1 NE2 REMARK 470 ILE D 304 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP B 96 O HOH B 501 2.16 REMARK 500 OD2 ASP B 242 OH TYR B 299 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 329 CA - CB - CG ANGL. DEV. = 20.1 DEGREES REMARK 500 LEU A 329 CB - CG - CD2 ANGL. DEV. = -20.9 DEGREES REMARK 500 LYS C 109 CB - CG - CD ANGL. DEV. = 15.9 DEGREES REMARK 500 LEU C 230 CA - CB - CG ANGL. DEV. = 15.5 DEGREES REMARK 500 ARG D 305 NE - CZ - NH1 ANGL. DEV. = -6.2 DEGREES REMARK 500 ARG D 305 NE - CZ - NH2 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 33 -117.58 57.98 REMARK 500 PRO A 66 48.69 -79.43 REMARK 500 HIS A 214 -74.65 63.36 REMARK 500 SER A 328 34.17 -89.62 REMARK 500 LEU A 329 109.91 86.61 REMARK 500 PRO B 66 49.41 -79.17 REMARK 500 PRO B 149 21.86 -58.53 REMARK 500 ALA B 150 -25.11 63.48 REMARK 500 HIS B 214 -73.40 62.07 REMARK 500 SER B 328 34.83 -96.60 REMARK 500 PRO C 66 47.86 -78.24 REMARK 500 HIS C 214 -76.48 63.69 REMARK 500 SER C 328 36.67 -94.46 REMARK 500 SER D 27 -130.05 -158.90 REMARK 500 ALA D 33 -128.88 63.02 REMARK 500 PRO D 66 48.14 -79.00 REMARK 500 HIS D 214 -79.30 67.09 REMARK 500 SER D 328 33.32 -90.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue UDP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue UDP B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue UDP C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue UDP D 401 DBREF1 6CGI A 25 335 UNP A0A0H3NMP8_SALTS DBREF2 6CGI A A0A0H3NMP8 25 335 DBREF1 6CGI B 25 335 UNP A0A0H3NMP8_SALTS DBREF2 6CGI B A0A0H3NMP8 25 335 DBREF1 6CGI C 25 335 UNP A0A0H3NMP8_SALTS DBREF2 6CGI C A0A0H3NMP8 25 335 DBREF1 6CGI D 25 335 UNP A0A0H3NMP8_SALTS DBREF2 6CGI D A0A0H3NMP8 25 335 SEQADV 6CGI SER A 22 UNP A0A0H3NMP EXPRESSION TAG SEQADV 6CGI ASN A 23 UNP A0A0H3NMP EXPRESSION TAG SEQADV 6CGI ALA A 24 UNP A0A0H3NMP EXPRESSION TAG SEQADV 6CGI SER B 22 UNP A0A0H3NMP EXPRESSION TAG SEQADV 6CGI ASN B 23 UNP A0A0H3NMP EXPRESSION TAG SEQADV 6CGI ALA B 24 UNP A0A0H3NMP EXPRESSION TAG SEQADV 6CGI SER C 22 UNP A0A0H3NMP EXPRESSION TAG SEQADV 6CGI ASN C 23 UNP A0A0H3NMP EXPRESSION TAG SEQADV 6CGI ALA C 24 UNP A0A0H3NMP EXPRESSION TAG SEQADV 6CGI SER D 22 UNP A0A0H3NMP EXPRESSION TAG SEQADV 6CGI ASN D 23 UNP A0A0H3NMP EXPRESSION TAG SEQADV 6CGI ALA D 24 UNP A0A0H3NMP EXPRESSION TAG SEQRES 1 A 314 SER ASN ALA PRO SER SER GLY SER ALA ASN PHE ALA GLY SEQRES 2 A 314 VAL GLU TYR PRO LEU LEU PRO LEU ASP GLN HIS THR PRO SEQRES 3 A 314 LEU LEU PHE GLN TRP PHE GLU ARG ASN PRO SER ARG PHE SEQRES 4 A 314 GLY GLU ASN GLN ILE PRO ILE ILE ASN THR GLN GLN ASN SEQRES 5 A 314 PRO TYR LEU ASN ASN ILE ILE ASN ALA ALA ILE ILE GLU SEQRES 6 A 314 LYS GLU ARG THR ILE GLY VAL LEU VAL ASP GLY ASN PHE SEQRES 7 A 314 SER ALA GLY GLN LYS LYS ALA LEU ALA LYS LEU GLU LYS SEQRES 8 A 314 GLN TYR GLU ASN ILE LYS VAL ILE TYR ASN SER ASP LEU SEQRES 9 A 314 ASP TYR SER MET TYR ASP LYS LYS LEU SER ASP ILE TYR SEQRES 10 A 314 LEU GLU ASN ILE ALA LYS ILE GLU ALA GLN PRO ALA ASN SEQRES 11 A 314 VAL ARG ASP GLU TYR LEU LEU GLY GLU ILE LYS LYS SER SEQRES 12 A 314 LEU ASN GLU VAL LEU LYS ASN ASN PRO GLU GLU SER LEU SEQRES 13 A 314 VAL SER SER HIS ASP LYS ARG LEU GLY HIS VAL ARG PHE SEQRES 14 A 314 ASP PHE TYR ARG ASN LEU PHE LEU LEU LYS GLY SER ASN SEQRES 15 A 314 ALA PHE LEU GLU ALA GLY LYS HIS GLY CYS HIS HIS LEU SEQRES 16 A 314 GLN PRO GLY GLY GLY CYS ILE TYR LEU ASP ALA ASP MET SEQRES 17 A 314 LEU LEU THR GLY LYS LEU GLY THR LEU TYR LEU PRO ASP SEQRES 18 A 314 GLY ILE ALA VAL HIS VAL SER ARG LYS GLY ASN SER MET SEQRES 19 A 314 SER LEU GLU ASN GLY ILE ILE ALA VAL ASN ARG SER GLU SEQRES 20 A 314 HIS PRO ALA LEU LYS LYS GLY LEU GLU ILE MET HIS SER SEQRES 21 A 314 LYS PRO TYR GLY ASP PRO TYR ILE ASP GLY VAL CYS GLY SEQRES 22 A 314 GLY LEU ARG HIS TYR PHE ASN CYS SER ILE ARG HIS ASN SEQRES 23 A 314 TYR GLU GLU PHE CYS ASN PHE ILE GLU PHE LYS HIS GLU SEQRES 24 A 314 HIS ILE PHE MET ASP THR SER SER LEU THR ILE SER SER SEQRES 25 A 314 TRP ARG SEQRES 1 B 314 SER ASN ALA PRO SER SER GLY SER ALA ASN PHE ALA GLY SEQRES 2 B 314 VAL GLU TYR PRO LEU LEU PRO LEU ASP GLN HIS THR PRO SEQRES 3 B 314 LEU LEU PHE GLN TRP PHE GLU ARG ASN PRO SER ARG PHE SEQRES 4 B 314 GLY GLU ASN GLN ILE PRO ILE ILE ASN THR GLN GLN ASN SEQRES 5 B 314 PRO TYR LEU ASN ASN ILE ILE ASN ALA ALA ILE ILE GLU SEQRES 6 B 314 LYS GLU ARG THR ILE GLY VAL LEU VAL ASP GLY ASN PHE SEQRES 7 B 314 SER ALA GLY GLN LYS LYS ALA LEU ALA LYS LEU GLU LYS SEQRES 8 B 314 GLN TYR GLU ASN ILE LYS VAL ILE TYR ASN SER ASP LEU SEQRES 9 B 314 ASP TYR SER MET TYR ASP LYS LYS LEU SER ASP ILE TYR SEQRES 10 B 314 LEU GLU ASN ILE ALA LYS ILE GLU ALA GLN PRO ALA ASN SEQRES 11 B 314 VAL ARG ASP GLU TYR LEU LEU GLY GLU ILE LYS LYS SER SEQRES 12 B 314 LEU ASN GLU VAL LEU LYS ASN ASN PRO GLU GLU SER LEU SEQRES 13 B 314 VAL SER SER HIS ASP LYS ARG LEU GLY HIS VAL ARG PHE SEQRES 14 B 314 ASP PHE TYR ARG ASN LEU PHE LEU LEU LYS GLY SER ASN SEQRES 15 B 314 ALA PHE LEU GLU ALA GLY LYS HIS GLY CYS HIS HIS LEU SEQRES 16 B 314 GLN PRO GLY GLY GLY CYS ILE TYR LEU ASP ALA ASP MET SEQRES 17 B 314 LEU LEU THR GLY LYS LEU GLY THR LEU TYR LEU PRO ASP SEQRES 18 B 314 GLY ILE ALA VAL HIS VAL SER ARG LYS GLY ASN SER MET SEQRES 19 B 314 SER LEU GLU ASN GLY ILE ILE ALA VAL ASN ARG SER GLU SEQRES 20 B 314 HIS PRO ALA LEU LYS LYS GLY LEU GLU ILE MET HIS SER SEQRES 21 B 314 LYS PRO TYR GLY ASP PRO TYR ILE ASP GLY VAL CYS GLY SEQRES 22 B 314 GLY LEU ARG HIS TYR PHE ASN CYS SER ILE ARG HIS ASN SEQRES 23 B 314 TYR GLU GLU PHE CYS ASN PHE ILE GLU PHE LYS HIS GLU SEQRES 24 B 314 HIS ILE PHE MET ASP THR SER SER LEU THR ILE SER SER SEQRES 25 B 314 TRP ARG SEQRES 1 C 314 SER ASN ALA PRO SER SER GLY SER ALA ASN PHE ALA GLY SEQRES 2 C 314 VAL GLU TYR PRO LEU LEU PRO LEU ASP GLN HIS THR PRO SEQRES 3 C 314 LEU LEU PHE GLN TRP PHE GLU ARG ASN PRO SER ARG PHE SEQRES 4 C 314 GLY GLU ASN GLN ILE PRO ILE ILE ASN THR GLN GLN ASN SEQRES 5 C 314 PRO TYR LEU ASN ASN ILE ILE ASN ALA ALA ILE ILE GLU SEQRES 6 C 314 LYS GLU ARG THR ILE GLY VAL LEU VAL ASP GLY ASN PHE SEQRES 7 C 314 SER ALA GLY GLN LYS LYS ALA LEU ALA LYS LEU GLU LYS SEQRES 8 C 314 GLN TYR GLU ASN ILE LYS VAL ILE TYR ASN SER ASP LEU SEQRES 9 C 314 ASP TYR SER MET TYR ASP LYS LYS LEU SER ASP ILE TYR SEQRES 10 C 314 LEU GLU ASN ILE ALA LYS ILE GLU ALA GLN PRO ALA ASN SEQRES 11 C 314 VAL ARG ASP GLU TYR LEU LEU GLY GLU ILE LYS LYS SER SEQRES 12 C 314 LEU ASN GLU VAL LEU LYS ASN ASN PRO GLU GLU SER LEU SEQRES 13 C 314 VAL SER SER HIS ASP LYS ARG LEU GLY HIS VAL ARG PHE SEQRES 14 C 314 ASP PHE TYR ARG ASN LEU PHE LEU LEU LYS GLY SER ASN SEQRES 15 C 314 ALA PHE LEU GLU ALA GLY LYS HIS GLY CYS HIS HIS LEU SEQRES 16 C 314 GLN PRO GLY GLY GLY CYS ILE TYR LEU ASP ALA ASP MET SEQRES 17 C 314 LEU LEU THR GLY LYS LEU GLY THR LEU TYR LEU PRO ASP SEQRES 18 C 314 GLY ILE ALA VAL HIS VAL SER ARG LYS GLY ASN SER MET SEQRES 19 C 314 SER LEU GLU ASN GLY ILE ILE ALA VAL ASN ARG SER GLU SEQRES 20 C 314 HIS PRO ALA LEU LYS LYS GLY LEU GLU ILE MET HIS SER SEQRES 21 C 314 LYS PRO TYR GLY ASP PRO TYR ILE ASP GLY VAL CYS GLY SEQRES 22 C 314 GLY LEU ARG HIS TYR PHE ASN CYS SER ILE ARG HIS ASN SEQRES 23 C 314 TYR GLU GLU PHE CYS ASN PHE ILE GLU PHE LYS HIS GLU SEQRES 24 C 314 HIS ILE PHE MET ASP THR SER SER LEU THR ILE SER SER SEQRES 25 C 314 TRP ARG SEQRES 1 D 314 SER ASN ALA PRO SER SER GLY SER ALA ASN PHE ALA GLY SEQRES 2 D 314 VAL GLU TYR PRO LEU LEU PRO LEU ASP GLN HIS THR PRO SEQRES 3 D 314 LEU LEU PHE GLN TRP PHE GLU ARG ASN PRO SER ARG PHE SEQRES 4 D 314 GLY GLU ASN GLN ILE PRO ILE ILE ASN THR GLN GLN ASN SEQRES 5 D 314 PRO TYR LEU ASN ASN ILE ILE ASN ALA ALA ILE ILE GLU SEQRES 6 D 314 LYS GLU ARG THR ILE GLY VAL LEU VAL ASP GLY ASN PHE SEQRES 7 D 314 SER ALA GLY GLN LYS LYS ALA LEU ALA LYS LEU GLU LYS SEQRES 8 D 314 GLN TYR GLU ASN ILE LYS VAL ILE TYR ASN SER ASP LEU SEQRES 9 D 314 ASP TYR SER MET TYR ASP LYS LYS LEU SER ASP ILE TYR SEQRES 10 D 314 LEU GLU ASN ILE ALA LYS ILE GLU ALA GLN PRO ALA ASN SEQRES 11 D 314 VAL ARG ASP GLU TYR LEU LEU GLY GLU ILE LYS LYS SER SEQRES 12 D 314 LEU ASN GLU VAL LEU LYS ASN ASN PRO GLU GLU SER LEU SEQRES 13 D 314 VAL SER SER HIS ASP LYS ARG LEU GLY HIS VAL ARG PHE SEQRES 14 D 314 ASP PHE TYR ARG ASN LEU PHE LEU LEU LYS GLY SER ASN SEQRES 15 D 314 ALA PHE LEU GLU ALA GLY LYS HIS GLY CYS HIS HIS LEU SEQRES 16 D 314 GLN PRO GLY GLY GLY CYS ILE TYR LEU ASP ALA ASP MET SEQRES 17 D 314 LEU LEU THR GLY LYS LEU GLY THR LEU TYR LEU PRO ASP SEQRES 18 D 314 GLY ILE ALA VAL HIS VAL SER ARG LYS GLY ASN SER MET SEQRES 19 D 314 SER LEU GLU ASN GLY ILE ILE ALA VAL ASN ARG SER GLU SEQRES 20 D 314 HIS PRO ALA LEU LYS LYS GLY LEU GLU ILE MET HIS SER SEQRES 21 D 314 LYS PRO TYR GLY ASP PRO TYR ILE ASP GLY VAL CYS GLY SEQRES 22 D 314 GLY LEU ARG HIS TYR PHE ASN CYS SER ILE ARG HIS ASN SEQRES 23 D 314 TYR GLU GLU PHE CYS ASN PHE ILE GLU PHE LYS HIS GLU SEQRES 24 D 314 HIS ILE PHE MET ASP THR SER SER LEU THR ILE SER SER SEQRES 25 D 314 TRP ARG HET UDP A 401 25 HET UDP B 401 25 HET UDP C 401 25 HET UDP D 401 25 HETNAM UDP URIDINE-5'-DIPHOSPHATE FORMUL 5 UDP 4(C9 H14 N2 O12 P2) FORMUL 9 HOH *292(H2 O) HELIX 1 AA1 ASN A 56 PHE A 60 5 5 HELIX 2 AA2 PRO A 74 GLU A 86 1 13 HELIX 3 AA3 SER A 100 TYR A 114 1 15 HELIX 4 AA4 SER A 123 LEU A 125 5 3 HELIX 5 AA5 TYR A 127 ASP A 131 5 5 HELIX 6 AA6 LYS A 133 ALA A 147 1 15 HELIX 7 AA7 ASP A 154 ASN A 172 1 19 HELIX 8 AA8 SER A 176 LYS A 183 1 8 HELIX 9 AA9 GLY A 186 GLY A 201 1 16 HELIX 10 AB1 SER A 202 ALA A 208 1 7 HELIX 11 AB2 HIS A 269 LYS A 282 1 14 HELIX 12 AB3 VAL A 292 PHE A 300 1 9 HELIX 13 AB4 ASN A 307 GLU A 316 1 10 HELIX 14 AB5 ASN B 56 PHE B 60 5 5 HELIX 15 AB6 PRO B 74 GLU B 86 1 13 HELIX 16 AB7 SER B 100 TYR B 114 1 15 HELIX 17 AB8 SER B 123 LEU B 125 5 3 HELIX 18 AB9 TYR B 127 ASP B 131 5 5 HELIX 19 AC1 LYS B 133 ALA B 147 1 15 HELIX 20 AC2 ASP B 154 ASN B 172 1 19 HELIX 21 AC3 SER B 176 ARG B 184 1 9 HELIX 22 AC4 GLY B 186 GLY B 201 1 16 HELIX 23 AC5 SER B 202 ALA B 208 1 7 HELIX 24 AC6 HIS B 269 LYS B 282 1 14 HELIX 25 AC7 VAL B 292 PHE B 300 1 9 HELIX 26 AC8 ASN B 307 GLU B 316 1 10 HELIX 27 AC9 ASP B 325 LEU B 329 5 5 HELIX 28 AD1 ASN C 56 PHE C 60 5 5 HELIX 29 AD2 PRO C 74 GLU C 86 1 13 HELIX 30 AD3 SER C 100 TYR C 114 1 15 HELIX 31 AD4 SER C 123 LEU C 125 5 3 HELIX 32 AD5 TYR C 127 ASP C 131 5 5 HELIX 33 AD6 LYS C 133 ALA C 147 1 15 HELIX 34 AD7 ASP C 154 ASN C 172 1 19 HELIX 35 AD8 SER C 176 LYS C 183 1 8 HELIX 36 AD9 GLY C 186 GLY C 201 1 16 HELIX 37 AE1 SER C 202 ALA C 208 1 7 HELIX 38 AE2 HIS C 269 LYS C 282 1 14 HELIX 39 AE3 VAL C 292 PHE C 300 1 9 HELIX 40 AE4 ASN C 307 GLU C 316 1 10 HELIX 41 AE5 ASP C 325 LEU C 329 5 5 HELIX 42 AE6 ASN D 56 PHE D 60 5 5 HELIX 43 AE7 PRO D 74 GLU D 86 1 13 HELIX 44 AE8 SER D 100 TYR D 114 1 15 HELIX 45 AE9 SER D 123 LEU D 125 5 3 HELIX 46 AF1 TYR D 127 ASP D 131 5 5 HELIX 47 AF2 LYS D 133 ALA D 147 1 15 HELIX 48 AF3 ASP D 154 ASN D 172 1 19 HELIX 49 AF4 SER D 176 ASP D 182 1 7 HELIX 50 AF5 GLY D 186 GLY D 201 1 16 HELIX 51 AF6 SER D 202 ALA D 208 1 7 HELIX 52 AF7 HIS D 269 LYS D 282 1 14 HELIX 53 AF8 VAL D 292 PHE D 300 1 9 HELIX 54 AF9 ASN D 307 GLU D 316 1 10 HELIX 55 AG1 ASP D 325 LEU D 329 5 5 SHEET 1 AA1 3 SER A 29 PHE A 32 0 SHEET 2 AA1 3 VAL A 35 LEU A 42 -1 O TYR A 37 N ALA A 30 SHEET 3 AA1 3 LEU A 238 PRO A 241 -1 O LEU A 240 N LEU A 40 SHEET 1 AA2 6 ILE A 117 TYR A 121 0 SHEET 2 AA2 6 ILE A 91 ASP A 96 1 N ILE A 91 O LYS A 118 SHEET 3 AA2 6 LEU A 48 PHE A 53 1 N LEU A 48 O GLY A 92 SHEET 4 AA2 6 GLY A 220 LEU A 225 1 O LEU A 225 N LEU A 49 SHEET 5 AA2 6 SER A 254 ARG A 266 -1 O ILE A 262 N TYR A 224 SHEET 6 AA2 6 ILE A 244 LYS A 251 -1 N HIS A 247 O GLU A 258 SHEET 1 AA3 2 LEU A 230 LEU A 231 0 SHEET 2 AA3 2 ILE A 322 PHE A 323 -1 O PHE A 323 N LEU A 230 SHEET 1 AA4 3 SER B 29 PHE B 32 0 SHEET 2 AA4 3 VAL B 35 LEU B 42 -1 O TYR B 37 N ALA B 30 SHEET 3 AA4 3 LEU B 238 PRO B 241 -1 O LEU B 240 N LEU B 40 SHEET 1 AA5 6 ILE B 117 TYR B 121 0 SHEET 2 AA5 6 ILE B 91 ASP B 96 1 N ILE B 91 O LYS B 118 SHEET 3 AA5 6 LEU B 48 PHE B 53 1 N LEU B 48 O GLY B 92 SHEET 4 AA5 6 GLY B 220 LEU B 225 1 O LEU B 225 N LEU B 49 SHEET 5 AA5 6 SER B 254 ARG B 266 -1 O ILE B 262 N TYR B 224 SHEET 6 AA5 6 ILE B 244 LYS B 251 -1 N LYS B 251 O SER B 254 SHEET 1 AA6 2 LEU B 230 LEU B 231 0 SHEET 2 AA6 2 ILE B 322 PHE B 323 -1 O PHE B 323 N LEU B 230 SHEET 1 AA7 3 SER C 29 PHE C 32 0 SHEET 2 AA7 3 VAL C 35 LEU C 42 -1 O TYR C 37 N ALA C 30 SHEET 3 AA7 3 LEU C 238 PRO C 241 -1 O LEU C 240 N LEU C 40 SHEET 1 AA8 6 ILE C 117 TYR C 121 0 SHEET 2 AA8 6 ILE C 91 ASP C 96 1 N ILE C 91 O LYS C 118 SHEET 3 AA8 6 LEU C 48 PHE C 53 1 N LEU C 48 O GLY C 92 SHEET 4 AA8 6 GLY C 220 LEU C 225 1 O LEU C 225 N LEU C 49 SHEET 5 AA8 6 SER C 254 ARG C 266 -1 O ILE C 262 N TYR C 224 SHEET 6 AA8 6 ILE C 244 LYS C 251 -1 N LYS C 251 O SER C 254 SHEET 1 AA9 2 LEU C 230 LEU C 231 0 SHEET 2 AA9 2 ILE C 322 PHE C 323 -1 O PHE C 323 N LEU C 230 SHEET 1 AB1 3 SER D 29 PHE D 32 0 SHEET 2 AB1 3 VAL D 35 LEU D 42 -1 O TYR D 37 N ALA D 30 SHEET 3 AB1 3 LEU D 238 PRO D 241 -1 O LEU D 240 N LEU D 40 SHEET 1 AB2 6 ILE D 117 TYR D 121 0 SHEET 2 AB2 6 ILE D 91 ASP D 96 1 N ILE D 91 O LYS D 118 SHEET 3 AB2 6 LEU D 48 PHE D 53 1 N LEU D 48 O GLY D 92 SHEET 4 AB2 6 GLY D 220 LEU D 225 1 O LEU D 225 N LEU D 49 SHEET 5 AB2 6 SER D 254 ARG D 266 -1 O ILE D 262 N TYR D 224 SHEET 6 AB2 6 ILE D 244 LYS D 251 -1 N LYS D 251 O SER D 254 SHEET 1 AB3 2 LEU D 230 LEU D 231 0 SHEET 2 AB3 2 ILE D 322 PHE D 323 -1 O PHE D 323 N LEU D 230 SITE 1 AC1 14 GLN A 51 TRP A 52 PHE A 53 HIS A 187 SITE 2 AC1 14 PHE A 190 ARG A 194 TYR A 224 ASP A 226 SITE 3 AC1 14 ALA A 227 SER A 327 HOH A 518 HOH A 530 SITE 4 AC1 14 HOH A 537 HOH A 541 SITE 1 AC2 13 GLN B 51 TRP B 52 PHE B 53 TYR B 75 SITE 2 AC2 13 PHE B 190 ARG B 194 TYR B 224 ASP B 226 SITE 3 AC2 13 ALA B 227 HOH B 503 HOH B 517 HOH B 525 SITE 4 AC2 13 HOH B 529 SITE 1 AC3 12 GLN C 51 TRP C 52 PHE C 53 HIS C 187 SITE 2 AC3 12 PHE C 190 ARG C 194 TYR C 224 ASP C 226 SITE 3 AC3 12 ALA C 227 HOH C 504 HOH C 506 HOH C 522 SITE 1 AC4 14 GLN D 51 TRP D 52 PHE D 53 TYR D 75 SITE 2 AC4 14 HIS D 187 PHE D 190 ARG D 194 TYR D 224 SITE 3 AC4 14 ASP D 226 ALA D 227 HOH D 515 HOH D 520 SITE 4 AC4 14 HOH D 554 HOH D 558 CRYST1 74.540 96.170 90.710 90.00 93.28 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013416 0.000000 0.000768 0.00000 SCALE2 0.000000 0.010398 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011042 0.00000