HEADER HYDROLASE 20-FEB-18 6CGK TITLE STRUCTURE OF THE HAD DOMAIN OF EFFECTOR PROTEIN LEM4 (LPG1101) FROM TITLE 2 LEGIONELLA PNEUMOPHILA (INACTIVE MUTANT)WITH PHOSPHATE BOUND IN THE TITLE 3 ACTIVE SITE COMPND MOL_ID: 1; COMPND 2 MOLECULE: EFFECTOR PROTEIN LEM4 (LPG1101); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEGIONELLA PNEUMOPHILA SUBSP. PNEUMOPHILA; SOURCE 3 ORGANISM_TAXID: 272624; SOURCE 4 STRAIN: PHILADELPHIA 1 / ATCC 33152 / DSM 7513; SOURCE 5 GENE: LPG1101; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS HALOACID DEHALOGENASE SUPERFAMILY, TYROSINE PHOSPHATASE, TRANSLOCATED KEYWDS 2 BACTERIAL EFFECTOR, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.A.BEYRAKHOVA,C.XU,M.CYGLER REVDAT 5 04-OCT-23 6CGK 1 REMARK REVDAT 4 08-JAN-20 6CGK 1 REMARK REVDAT 3 05-SEP-18 6CGK 1 JRNL REVDAT 2 25-JUL-18 6CGK 1 JRNL REVDAT 1 18-JUL-18 6CGK 0 JRNL AUTH K.BEYRAKHOVA,L.LI,C.XU,A.GAGARINOVA,M.CYGLER JRNL TITL LEGIONELLA PNEUMOPHILAEFFECTOR LEM4 IS A MEMBRANE-ASSOCIATED JRNL TITL 2 PROTEIN TYROSINE PHOSPHATASE. JRNL REF J. BIOL. CHEM. V. 293 13044 2018 JRNL REFN ESSN 1083-351X JRNL PMID 29976756 JRNL DOI 10.1074/JBC.RA118.003845 REMARK 2 REMARK 2 RESOLUTION. 1.67 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.67 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.24 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 24476 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1199 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.2568 - 3.4692 0.99 2775 134 0.1542 0.1791 REMARK 3 2 3.4692 - 2.7537 1.00 2612 153 0.1805 0.2165 REMARK 3 3 2.7537 - 2.4056 1.00 2587 130 0.1727 0.2131 REMARK 3 4 2.4056 - 2.1857 1.00 2584 129 0.1701 0.2274 REMARK 3 5 2.1857 - 2.0290 1.00 2542 136 0.2036 0.2781 REMARK 3 6 2.0290 - 1.9094 1.00 2569 114 0.2226 0.2527 REMARK 3 7 1.9094 - 1.8138 1.00 2516 156 0.2648 0.3292 REMARK 3 8 1.8138 - 1.7348 1.00 2553 115 0.3269 0.3736 REMARK 3 9 1.7348 - 1.6680 1.00 2539 132 0.3864 0.4038 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.720 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 15 THROUGH 73 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.2147 -0.0355 6.0588 REMARK 3 T TENSOR REMARK 3 T11: 0.2172 T22: 0.2427 REMARK 3 T33: 0.2931 T12: 0.0011 REMARK 3 T13: 0.0567 T23: 0.0262 REMARK 3 L TENSOR REMARK 3 L11: 3.0766 L22: 3.5467 REMARK 3 L33: 0.6269 L12: 1.4968 REMARK 3 L13: 0.3987 L23: 0.1650 REMARK 3 S TENSOR REMARK 3 S11: 0.1739 S12: -0.1961 S13: -0.2148 REMARK 3 S21: 0.1191 S22: -0.1451 S23: 0.2002 REMARK 3 S31: 0.0702 S32: -0.0370 S33: -0.0362 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 74 THROUGH 109 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.4572 8.1616 6.7008 REMARK 3 T TENSOR REMARK 3 T11: 0.2094 T22: 0.2170 REMARK 3 T33: 0.2679 T12: -0.0053 REMARK 3 T13: 0.0798 T23: 0.0447 REMARK 3 L TENSOR REMARK 3 L11: 3.8496 L22: 5.0434 REMARK 3 L33: 2.4622 L12: 2.4868 REMARK 3 L13: 1.1219 L23: 1.1657 REMARK 3 S TENSOR REMARK 3 S11: 0.1008 S12: -0.0962 S13: 0.4280 REMARK 3 S21: 0.1524 S22: -0.1273 S23: 0.4476 REMARK 3 S31: -0.1296 S32: -0.0430 S33: -0.0120 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 110 THROUGH 157 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.6405 4.1100 3.9630 REMARK 3 T TENSOR REMARK 3 T11: 0.2106 T22: 0.2372 REMARK 3 T33: 0.2665 T12: -0.0020 REMARK 3 T13: 0.0251 T23: 0.0185 REMARK 3 L TENSOR REMARK 3 L11: 4.4868 L22: 3.0627 REMARK 3 L33: 1.4259 L12: 1.3319 REMARK 3 L13: 0.6014 L23: 0.6028 REMARK 3 S TENSOR REMARK 3 S11: 0.0672 S12: 0.1972 S13: -0.1749 REMARK 3 S21: -0.0065 S22: 0.0387 S23: -0.1289 REMARK 3 S31: -0.0273 S32: 0.2018 S33: -0.1158 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 158 THROUGH 175 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.3893 1.6200 12.9955 REMARK 3 T TENSOR REMARK 3 T11: 0.4257 T22: 0.4765 REMARK 3 T33: 0.5297 T12: 0.0321 REMARK 3 T13: -0.0981 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 2.9663 L22: 2.9008 REMARK 3 L33: 5.4964 L12: 2.7329 REMARK 3 L13: -1.0768 L23: -1.0846 REMARK 3 S TENSOR REMARK 3 S11: 0.1016 S12: -0.8448 S13: -0.6970 REMARK 3 S21: 0.7629 S22: 0.0708 S23: -0.7393 REMARK 3 S31: 0.6396 S32: 0.1731 S33: -0.1701 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 176 THROUGH 198 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.5128 9.9214 19.7331 REMARK 3 T TENSOR REMARK 3 T11: 0.5602 T22: 0.5278 REMARK 3 T33: 0.3054 T12: -0.1271 REMARK 3 T13: 0.0614 T23: -0.0090 REMARK 3 L TENSOR REMARK 3 L11: 3.7074 L22: 6.9480 REMARK 3 L33: 2.5191 L12: 0.6633 REMARK 3 L13: 1.4102 L23: -0.9853 REMARK 3 S TENSOR REMARK 3 S11: 0.2366 S12: -0.7563 S13: 0.0945 REMARK 3 S21: 0.7633 S22: -0.2257 S23: 0.2085 REMARK 3 S31: -0.2015 S32: 0.0982 S33: 0.1252 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 199 THROUGH 210 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.9387 25.5986 12.9105 REMARK 3 T TENSOR REMARK 3 T11: 0.6505 T22: 0.6312 REMARK 3 T33: 0.6894 T12: -0.0763 REMARK 3 T13: 0.1178 T23: -0.0909 REMARK 3 L TENSOR REMARK 3 L11: 2.9391 L22: 2.4695 REMARK 3 L33: 7.7067 L12: -2.2087 REMARK 3 L13: -4.5654 L23: 3.9090 REMARK 3 S TENSOR REMARK 3 S11: 0.6384 S12: 1.1644 S13: -0.2186 REMARK 3 S21: -0.9733 S22: -0.3205 S23: -0.6559 REMARK 3 S31: -1.1157 S32: -0.1836 S33: -0.4764 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6CGK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1000232724. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-APR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24546 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.668 REMARK 200 RESOLUTION RANGE LOW (A) : 52.814 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 14.30 REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.67 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.67 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : 14.40 REMARK 200 R MERGE FOR SHELL (I) : 1.35900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6CGJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS 6.5, 22% PEG 3350, 0.2 REMARK 280 M MG ACETATE, 0.6 M NACL, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z REMARK 290 4555 Y+1/2,-X+1/2,Z REMARK 290 5555 -X+1/2,Y+1/2,-Z REMARK 290 6555 X+1/2,-Y+1/2,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 52.81350 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 52.81350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 52.81350 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 52.81350 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 52.81350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 52.81350 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 52.81350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 52.81350 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 3 REMARK 465 ASN A 4 REMARK 465 ALA A 5 REMARK 465 SER A 6 REMARK 465 PHE A 7 REMARK 465 ASP A 8 REMARK 465 GLU A 9 REMARK 465 THR A 10 REMARK 465 SER A 11 REMARK 465 LYS A 12 REMARK 465 ARG A 13 REMARK 465 ASN A 14 REMARK 465 GLY A 211 REMARK 465 LYS A 212 REMARK 465 ILE A 213 REMARK 465 GLY A 214 REMARK 465 SER A 215 REMARK 465 ARG A 216 REMARK 465 PHE A 217 REMARK 465 HIS A 218 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 15 CG CD OE1 OE2 REMARK 470 LYS A 19 CE NZ REMARK 470 LYS A 36 CG CD CE NZ REMARK 470 ARG A 115 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 184 CD CE NZ REMARK 470 LYS A 189 CE NZ REMARK 470 ASP A 202 CG OD1 OD2 REMARK 470 LYS A 206 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 470 O HOH A 502 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 26 -68.23 -101.35 REMARK 500 THR A 29 -64.62 -107.73 REMARK 500 LEU A 177 72.21 -151.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 25 OD1 REMARK 620 2 ASP A 27 O 91.2 REMARK 620 3 ASP A 157 OD1 84.1 87.6 REMARK 620 4 PO4 A 301 O4 89.3 98.2 171.3 REMARK 620 5 HOH A 447 O 176.9 86.7 93.5 93.3 REMARK 620 6 HOH A 452 O 90.6 176.2 89.2 85.2 91.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6CGJ RELATED DB: PDB REMARK 900 NATIVE VERSION OF THE SAME PROTEIN REMARK 900 RELATED ID: 6CDW RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITH THE ACETATE IN THE ACTIVE CENTER DBREF 6CGK A 6 218 UNP Q5ZWI4 Q5ZWI4_LEGPH 6 218 SEQADV 6CGK SER A 3 UNP Q5ZWI4 EXPRESSION TAG SEQADV 6CGK ASN A 4 UNP Q5ZWI4 EXPRESSION TAG SEQADV 6CGK ALA A 5 UNP Q5ZWI4 EXPRESSION TAG SEQADV 6CGK ASN A 25 UNP Q5ZWI4 ASP 25 ENGINEERED MUTATION SEQRES 1 A 216 SER ASN ALA SER PHE ASP GLU THR SER LYS ARG ASN GLU SEQRES 2 A 216 GLY ARG VAL LYS ASN ILE VAL TYR LEU ASN PHE ASP GLY SEQRES 3 A 216 THR ILE THR GLY ALA HIS GLY LYS GLU VAL ILE SER SER SEQRES 4 A 216 PRO LEU CYS GLU ALA LEU SER THR LYS ALA THR PHE ASP SEQRES 5 A 216 GLU ARG MET ARG TYR LYS ASN GLU TYR ASP ALA SER ASP SEQRES 6 A 216 ASN LYS ILE LYS ILE THR GLU ASN ALA LYS ASN PHE LEU SEQRES 7 A 216 GLN ASP VAL ASN LYS LEU HIS PRO GLN VAL LYS ILE VAL SEQRES 8 A 216 ILE ILE SER ARG ASN HIS GLU ASN TYR ILE LYS ALA LEU SEQRES 9 A 216 LEU GLU PHE GLU ASN ILE ASP HIS ARG ASN ILE ILE ILE SEQRES 10 A 216 TYR PRO ARG GLY VAL GLY ASN THR ILE GLY PRO GLY GLU SEQRES 11 A 216 ASP LYS TYR LYS ALA VAL VAL SER HIS GLU GLU LYS PRO SEQRES 12 A 216 GLU CYS LEU PRO GLY PHE ARG LEU ILE CYS ASP ASP ASP SEQRES 13 A 216 GLU VAL ASP GLY GLU GLU MET CYS ASN GLY LEU ILE HIS SEQRES 14 A 216 THR GLY ARG SER GLN LEU VAL LYS PHE HIS ASN GLU LYS SEQRES 15 A 216 PRO GLY GLN PHE LYS TRP GLY GLU TYR PHE LYS GLU ILE SEQRES 16 A 216 LEU THR ASN CYS ASP ILE ALA VAL LYS GLU TYR LEU ASN SEQRES 17 A 216 GLY LYS ILE GLY SER ARG PHE HIS HET PO4 A 301 5 HET MG A 302 1 HET GOL A 303 14 HETNAM PO4 PHOSPHATE ION HETNAM MG MAGNESIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 PO4 O4 P 3- FORMUL 3 MG MG 2+ FORMUL 4 GOL C3 H8 O3 FORMUL 5 HOH *113(H2 O) HELIX 1 AA1 HIS A 34 VAL A 38 5 5 HELIX 2 AA2 SER A 41 THR A 49 1 9 HELIX 3 AA3 THR A 52 ARG A 58 1 7 HELIX 4 AA4 TYR A 59 ALA A 65 1 7 HELIX 5 AA5 ASP A 67 LYS A 71 5 5 HELIX 6 AA6 THR A 73 LYS A 85 1 13 HELIX 7 AA7 HIS A 99 GLU A 110 1 12 HELIX 8 AA8 GLY A 129 GLU A 132 5 4 HELIX 9 AA9 ASP A 133 GLU A 143 1 11 HELIX 10 AB1 ASP A 158 THR A 172 1 15 HELIX 11 AB2 LYS A 189 CYS A 201 1 13 HELIX 12 AB3 CYS A 201 LEU A 209 1 9 SHEET 1 AA1 5 ILE A 118 TYR A 120 0 SHEET 2 AA1 5 LYS A 91 ILE A 95 1 N ILE A 94 O ILE A 118 SHEET 3 AA1 5 ILE A 21 ASN A 25 1 N VAL A 22 O VAL A 93 SHEET 4 AA1 5 ARG A 152 ASP A 156 1 O LEU A 153 N TYR A 23 SHEET 5 AA1 5 VAL A 178 ASN A 182 1 O LYS A 179 N ARG A 152 LINK OD1 ASN A 25 MG MG A 302 1555 1555 1.95 LINK O ASP A 27 MG MG A 302 1555 1555 2.03 LINK OD1 ASP A 157 MG MG A 302 1555 1555 2.28 LINK O4 PO4 A 301 MG MG A 302 1555 1555 2.16 LINK MG MG A 302 O HOH A 447 1555 1555 2.05 LINK MG MG A 302 O HOH A 452 1555 1555 2.08 CISPEP 1 HIS A 87 PRO A 88 0 3.87 SITE 1 AC1 10 ASN A 25 PHE A 26 ASP A 27 SER A 96 SITE 2 AC1 10 ARG A 97 LYS A 134 MG A 302 HOH A 447 SITE 3 AC1 10 HOH A 452 HOH A 485 SITE 1 AC2 6 ASN A 25 ASP A 27 ASP A 157 PO4 A 301 SITE 2 AC2 6 HOH A 447 HOH A 452 SITE 1 AC3 6 ASP A 54 GLU A 74 GLU A 110 HOH A 401 SITE 2 AC3 6 HOH A 421 HOH A 464 CRYST1 105.627 105.627 36.255 90.00 90.00 90.00 P 4 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009467 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009467 0.000000 0.00000 SCALE3 0.000000 0.000000 0.027582 0.00000