HEADER CELL ADHESION 20-FEB-18 6CGS TITLE MOUSE CADHERIN-7 EC1-2 ADHESIVE FRAGMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: CADHERIN-7; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: EC1-2 (UNP RESIDUES 48-254); COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: CDH7; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CADHERIN EC DOMAIN DIMER EXTRACELLULAR, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR J.BRASCH,O.J.HARRISON,A.KACZYNSKA,L.SHAPIRO REVDAT 4 04-OCT-23 6CGS 1 LINK REVDAT 3 27-NOV-19 6CGS 1 REMARK REVDAT 2 23-MAY-18 6CGS 1 JRNL REVDAT 1 09-MAY-18 6CGS 0 JRNL AUTH J.BRASCH,P.S.KATSAMBA,O.J.HARRISON,G.AHLSEN,R.B.TROYANOVSKY, JRNL AUTH 2 I.INDRA,A.KACZYNSKA,B.KAESER,S.TROYANOVSKY,B.HONIG,L.SHAPIRO JRNL TITL HOMOPHILIC AND HETEROPHILIC INTERACTIONS OF TYPE II JRNL TITL 2 CADHERINS IDENTIFY SPECIFICITY GROUPS UNDERLYING JRNL TITL 3 CELL-ADHESIVE BEHAVIOR. JRNL REF CELL REP V. 23 1840 2018 JRNL REFN ESSN 2211-1247 JRNL PMID 29742438 JRNL DOI 10.1016/J.CELREP.2018.04.012 REMARK 2 REMARK 2 RESOLUTION. 1.72 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1839 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.72 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 48266 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2414 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.9965 - 4.4135 1.00 2884 152 0.1565 0.1673 REMARK 3 2 4.4135 - 3.5093 1.00 2784 147 0.1286 0.1741 REMARK 3 3 3.5093 - 3.0675 1.00 2716 143 0.1522 0.1892 REMARK 3 4 3.0675 - 2.7879 1.00 2742 144 0.1655 0.2072 REMARK 3 5 2.7879 - 2.5885 1.00 2694 142 0.1699 0.2223 REMARK 3 6 2.5885 - 2.4362 1.00 2718 142 0.1614 0.2091 REMARK 3 7 2.4362 - 2.3143 1.00 2692 143 0.1620 0.1877 REMARK 3 8 2.3143 - 2.2137 1.00 2686 141 0.1614 0.2095 REMARK 3 9 2.2137 - 2.1286 1.00 2671 140 0.1582 0.2026 REMARK 3 10 2.1286 - 2.0552 1.00 2682 141 0.1629 0.2134 REMARK 3 11 2.0552 - 1.9910 1.00 2666 142 0.1681 0.2143 REMARK 3 12 1.9910 - 1.9342 1.00 2657 140 0.1755 0.2450 REMARK 3 13 1.9342 - 1.8833 1.00 2657 140 0.1756 0.2307 REMARK 3 14 1.8833 - 1.8374 1.00 2650 139 0.1872 0.2379 REMARK 3 15 1.8374 - 1.7956 1.00 2692 143 0.2012 0.2512 REMARK 3 16 1.7956 - 1.7574 0.99 2644 138 0.2068 0.2289 REMARK 3 17 1.7574 - 1.7223 0.99 2617 137 0.2186 0.2463 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 0.90 REMARK 3 SHRINKAGE RADIUS : 0.60 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.870 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 3482 REMARK 3 ANGLE : 1.300 4780 REMARK 3 CHIRALITY : 0.144 541 REMARK 3 PLANARITY : 0.005 632 REMARK 3 DIHEDRAL : 13.198 1347 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6CGS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1000232751. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-SEP-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48271 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.3300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.65600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 6CGU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 21.5% (W/V) PEG 6000 0.1M MES PH 5.6 REMARK 280 1M LICL 30% GLYCEROL (CRYOPROTECTANT), VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.15200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.77300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.21550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.77300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.15200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.21550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 158 H THR A 161 1.46 REMARK 500 O GLY B 33 HE ARG B 80 1.50 REMARK 500 O HOH A 620 O HOH A 635 1.90 REMARK 500 O HOH A 519 O HOH A 662 1.97 REMARK 500 O HOH A 556 O HOH B 559 2.01 REMARK 500 O HOH B 601 O HOH B 609 2.03 REMARK 500 O HOH A 585 O HOH A 659 2.04 REMARK 500 O HOH A 642 O HOH A 660 2.06 REMARK 500 O HOH A 758 O HOH A 765 2.06 REMARK 500 O HOH B 533 O HOH B 621 2.07 REMARK 500 O HOH A 559 O HOH A 649 2.09 REMARK 500 O HOH B 518 O HOH B 680 2.10 REMARK 500 O HOH A 644 O HOH B 648 2.10 REMARK 500 O HOH B 620 O HOH B 637 2.11 REMARK 500 O HOH B 407 O HOH B 613 2.11 REMARK 500 O HOH A 658 O HOH A 687 2.12 REMARK 500 O HOH A 633 O HOH A 693 2.13 REMARK 500 OD2 ASP A 108 O HOH A 401 2.14 REMARK 500 O HOH A 599 O HOH A 702 2.15 REMARK 500 O HOH A 618 O HOH A 661 2.16 REMARK 500 O HOH B 639 O HOH B 662 2.16 REMARK 500 OE2 GLU B 158 O HOH B 401 2.16 REMARK 500 OD1 ASP A 17 O HOH A 402 2.16 REMARK 500 O HOH B 639 O HOH B 681 2.17 REMARK 500 O HOH A 635 O HOH A 709 2.18 REMARK 500 O HOH B 585 O HOH B 648 2.18 REMARK 500 OE2 GLU A 67 O HOH A 403 2.18 REMARK 500 O HOH B 489 O HOH B 593 2.18 REMARK 500 OE1 GLN A 191 O HOH A 404 2.19 REMARK 500 O HOH A 401 O HOH A 677 2.19 REMARK 500 O HOH A 403 O HOH A 638 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 19 CB - CG - CD1 ANGL. DEV. = 10.2 DEGREES REMARK 500 ARG A 80 NH1 - CZ - NH2 ANGL. DEV. = -6.8 DEGREES REMARK 500 ARG A 80 NE - CZ - NH2 ANGL. DEV. = 6.6 DEGREES REMARK 500 VAL B 9 CG1 - CB - CG2 ANGL. DEV. = 13.5 DEGREES REMARK 500 ARG B 65 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 5 43.10 -98.32 REMARK 500 SER A 46 -76.90 -132.23 REMARK 500 VAL A 189 42.25 38.23 REMARK 500 SER B 45 -3.87 76.82 REMARK 500 SER B 46 -77.19 -116.73 REMARK 500 VAL B 189 47.49 38.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 764 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH A 765 DISTANCE = 6.30 ANGSTROMS REMARK 525 HOH B 693 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH B 694 DISTANCE = 7.47 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 11 OE2 REMARK 620 2 GLU A 12 OE2 87.9 REMARK 620 3 ASP A 64 OD1 89.5 80.1 REMARK 620 4 GLU A 66 OE1 86.8 164.3 85.1 REMARK 620 5 ASP A 101 OD2 101.9 84.9 160.9 110.6 REMARK 620 6 HOH A 639 O 170.5 101.5 90.5 83.8 80.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 11 OE1 REMARK 620 2 GLU A 66 OE1 86.5 REMARK 620 3 GLU A 66 OE2 106.0 49.8 REMARK 620 4 ASP A 98 OD1 83.2 119.8 76.9 REMARK 620 5 ILE A 99 O 85.8 156.7 153.3 81.0 REMARK 620 6 ASP A 101 OD1 90.5 77.6 122.3 160.8 80.5 REMARK 620 7 ASP A 134 OD1 166.9 98.9 86.4 104.0 84.6 79.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 303 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 100 OD1 REMARK 620 2 ASN A 102 O 99.1 REMARK 620 3 ASP A 132 OD1 149.2 91.0 REMARK 620 4 ASP A 132 OD2 154.6 93.2 51.6 REMARK 620 5 ASP A 134 OD2 73.3 80.8 79.7 130.9 REMARK 620 6 SER A 141 O 86.6 174.3 84.0 81.6 100.8 REMARK 620 7 ASP A 187 OD2 77.7 93.5 131.0 79.5 149.1 87.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 11 OE1 REMARK 620 2 GLU B 66 OE1 87.1 REMARK 620 3 GLU B 66 OE2 103.6 49.4 REMARK 620 4 ASP B 98 OD1 84.5 122.6 78.0 REMARK 620 5 ILE B 99 O 86.8 154.1 156.1 81.8 REMARK 620 6 ASP B 101 OD1 92.4 76.9 122.0 159.9 78.1 REMARK 620 7 ASP B 134 OD1 169.5 96.8 86.3 101.5 85.4 79.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 11 OE2 REMARK 620 2 GLU B 12 OE2 90.5 REMARK 620 3 ASP B 64 OD1 90.9 78.8 REMARK 620 4 GLU B 66 OE1 85.4 168.7 90.7 REMARK 620 5 ASP B 101 OD2 100.3 84.1 159.7 106.9 REMARK 620 6 HOH B 576 O 173.0 96.2 92.3 88.4 78.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 303 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 100 OD1 REMARK 620 2 ASN B 102 O 100.0 REMARK 620 3 ASP B 132 OD1 146.4 88.5 REMARK 620 4 ASP B 132 OD2 157.8 91.0 52.1 REMARK 620 5 ASP B 134 OD2 73.5 80.1 76.2 127.8 REMARK 620 6 SER B 141 O 85.4 174.3 86.0 84.5 99.9 REMARK 620 7 ASP B 187 OD2 77.7 95.1 134.2 82.1 149.4 87.8 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 304 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6CG6 RELATED DB: PDB REMARK 900 RELATED ID: 6CG7 RELATED DB: PDB REMARK 900 RELATED ID: 6CGB RELATED DB: PDB REMARK 900 RELATED ID: 6CGS RELATED DB: PDB DBREF 6CGS A 1 207 UNP Q8BM92 CADH7_MOUSE 48 254 DBREF 6CGS B 1 207 UNP Q8BM92 CADH7_MOUSE 48 254 SEQRES 1 A 207 SER TRP VAL TRP ASN GLN PHE PHE VAL LEU GLU GLU TYR SEQRES 2 A 207 MET GLY SER ASP PRO LEU TYR VAL GLY LYS LEU HIS SER SEQRES 3 A 207 ASP VAL ASP LYS GLY ASP GLY SER ILE LYS TYR ILE LEU SEQRES 4 A 207 SER GLY GLU GLY ALA SER SER ILE PHE ILE ILE ASP GLU SEQRES 5 A 207 ASN THR GLY ASP ILE HIS ALA THR LYS ARG LEU ASP ARG SEQRES 6 A 207 GLU GLU GLN ALA TYR TYR THR LEU ARG ALA GLN ALA LEU SEQRES 7 A 207 ASP ARG LEU THR ASN LYS PRO VAL GLU PRO GLU SER GLU SEQRES 8 A 207 PHE VAL ILE LYS ILE GLN ASP ILE ASN ASP ASN GLU PRO SEQRES 9 A 207 LYS PHE LEU ASP GLY PRO TYR THR ALA GLY VAL PRO GLU SEQRES 10 A 207 MET SER PRO VAL GLY THR SER VAL VAL GLN VAL THR ALA SEQRES 11 A 207 THR ASP ALA ASP ASP PRO THR TYR GLY ASN SER ALA ARG SEQRES 12 A 207 VAL VAL TYR SER ILE LEU GLN GLY GLN PRO TYR PHE SER SEQRES 13 A 207 VAL GLU PRO LYS THR GLY VAL ILE LYS THR ALA LEU PRO SEQRES 14 A 207 ASN MET ASP ARG GLU ALA LYS ASP GLN TYR LEU LEU VAL SEQRES 15 A 207 ILE GLN ALA LYS ASP MET VAL GLY GLN ASN GLY GLY LEU SEQRES 16 A 207 SER GLY THR THR SER VAL THR VAL THR LEU THR ASP SEQRES 1 B 207 SER TRP VAL TRP ASN GLN PHE PHE VAL LEU GLU GLU TYR SEQRES 2 B 207 MET GLY SER ASP PRO LEU TYR VAL GLY LYS LEU HIS SER SEQRES 3 B 207 ASP VAL ASP LYS GLY ASP GLY SER ILE LYS TYR ILE LEU SEQRES 4 B 207 SER GLY GLU GLY ALA SER SER ILE PHE ILE ILE ASP GLU SEQRES 5 B 207 ASN THR GLY ASP ILE HIS ALA THR LYS ARG LEU ASP ARG SEQRES 6 B 207 GLU GLU GLN ALA TYR TYR THR LEU ARG ALA GLN ALA LEU SEQRES 7 B 207 ASP ARG LEU THR ASN LYS PRO VAL GLU PRO GLU SER GLU SEQRES 8 B 207 PHE VAL ILE LYS ILE GLN ASP ILE ASN ASP ASN GLU PRO SEQRES 9 B 207 LYS PHE LEU ASP GLY PRO TYR THR ALA GLY VAL PRO GLU SEQRES 10 B 207 MET SER PRO VAL GLY THR SER VAL VAL GLN VAL THR ALA SEQRES 11 B 207 THR ASP ALA ASP ASP PRO THR TYR GLY ASN SER ALA ARG SEQRES 12 B 207 VAL VAL TYR SER ILE LEU GLN GLY GLN PRO TYR PHE SER SEQRES 13 B 207 VAL GLU PRO LYS THR GLY VAL ILE LYS THR ALA LEU PRO SEQRES 14 B 207 ASN MET ASP ARG GLU ALA LYS ASP GLN TYR LEU LEU VAL SEQRES 15 B 207 ILE GLN ALA LYS ASP MET VAL GLY GLN ASN GLY GLY LEU SEQRES 16 B 207 SER GLY THR THR SER VAL THR VAL THR LEU THR ASP HET CA A 301 1 HET CA A 302 1 HET CA A 303 1 HET CA B 301 1 HET CA B 302 1 HET CA B 303 1 HET GOL B 304 14 HETNAM CA CALCIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 CA 6(CA 2+) FORMUL 9 GOL C3 H8 O3 FORMUL 10 HOH *659(H2 O) HELIX 1 AA1 MET A 188 GLN A 191 5 4 HELIX 2 AA2 MET B 188 GLN B 191 5 4 SHEET 1 AA1 4 GLN A 6 LEU A 10 0 SHEET 2 AA1 4 SER A 90 GLN A 97 1 O LYS A 95 N PHE A 7 SHEET 3 AA1 4 TYR A 70 ASP A 79 -1 N ALA A 75 O SER A 90 SHEET 4 AA1 4 ILE A 35 GLY A 41 -1 N LYS A 36 O LEU A 78 SHEET 1 AA2 3 LEU A 19 LYS A 23 0 SHEET 2 AA2 3 ASP A 56 ALA A 59 -1 O ILE A 57 N GLY A 22 SHEET 3 AA2 3 PHE A 48 ILE A 50 -1 N ILE A 49 O HIS A 58 SHEET 1 AA3 4 TYR A 111 PRO A 116 0 SHEET 2 AA3 4 SER A 196 THR A 206 1 O THR A 204 N ALA A 113 SHEET 3 AA3 4 GLN A 178 LYS A 186 -1 N LEU A 181 O VAL A 201 SHEET 4 AA3 4 VAL A 145 GLN A 150 -1 N SER A 147 O GLN A 184 SHEET 1 AA4 3 SER A 124 GLN A 127 0 SHEET 2 AA4 3 VAL A 163 THR A 166 -1 O ILE A 164 N VAL A 125 SHEET 3 AA4 3 PHE A 155 VAL A 157 -1 N SER A 156 O LYS A 165 SHEET 1 AA5 4 GLN B 6 LEU B 10 0 SHEET 2 AA5 4 SER B 90 GLN B 97 1 O LYS B 95 N PHE B 7 SHEET 3 AA5 4 TYR B 70 ASP B 79 -1 N LEU B 73 O PHE B 92 SHEET 4 AA5 4 ILE B 35 GLY B 41 -1 N LYS B 36 O LEU B 78 SHEET 1 AA6 3 LEU B 19 LYS B 23 0 SHEET 2 AA6 3 ASP B 56 ALA B 59 -1 O ILE B 57 N GLY B 22 SHEET 3 AA6 3 PHE B 48 ILE B 50 -1 N ILE B 49 O HIS B 58 SHEET 1 AA7 4 TYR B 111 PRO B 116 0 SHEET 2 AA7 4 SER B 196 THR B 206 1 O THR B 206 N VAL B 115 SHEET 3 AA7 4 GLN B 178 LYS B 186 -1 N LEU B 181 O VAL B 201 SHEET 4 AA7 4 VAL B 145 GLN B 150 -1 N SER B 147 O GLN B 184 SHEET 1 AA8 3 SER B 124 GLN B 127 0 SHEET 2 AA8 3 VAL B 163 THR B 166 -1 O ILE B 164 N VAL B 126 SHEET 3 AA8 3 PHE B 155 VAL B 157 -1 N SER B 156 O LYS B 165 LINK OE2 GLU A 11 CA CA A 301 1555 1555 2.34 LINK OE1 GLU A 11 CA CA A 302 1555 1555 2.34 LINK OE2 GLU A 12 CA CA A 301 1555 1555 2.36 LINK OD1 ASP A 64 CA CA A 301 1555 1555 2.36 LINK OE1 GLU A 66 CA CA A 301 1555 1555 2.34 LINK OE1 GLU A 66 CA CA A 302 1555 1555 2.74 LINK OE2 GLU A 66 CA CA A 302 1555 1555 2.40 LINK OD1 ASP A 98 CA CA A 302 1555 1555 2.35 LINK O ILE A 99 CA CA A 302 1555 1555 2.44 LINK OD1 ASN A 100 CA CA A 303 1555 1555 2.32 LINK OD2 ASP A 101 CA CA A 301 1555 1555 2.36 LINK OD1 ASP A 101 CA CA A 302 1555 1555 2.37 LINK O ASN A 102 CA CA A 303 1555 1555 2.29 LINK OD1 ASP A 132 CA CA A 303 1555 1555 2.58 LINK OD2 ASP A 132 CA CA A 303 1555 1555 2.49 LINK OD1 ASP A 134 CA CA A 302 1555 1555 2.35 LINK OD2 ASP A 134 CA CA A 303 1555 1555 2.34 LINK O SER A 141 CA CA A 303 1555 1555 2.34 LINK OD2 ASP A 187 CA CA A 303 1555 1555 2.39 LINK CA CA A 301 O HOH A 639 1555 1555 2.39 LINK OE1 GLU B 11 CA CA B 301 1555 1555 2.31 LINK OE2 GLU B 11 CA CA B 302 1555 1555 2.40 LINK OE2 GLU B 12 CA CA B 302 1555 1555 2.43 LINK OD1 ASP B 64 CA CA B 302 1555 1555 2.24 LINK OE1 GLU B 66 CA CA B 301 1555 1555 2.76 LINK OE2 GLU B 66 CA CA B 301 1555 1555 2.45 LINK OE1 GLU B 66 CA CA B 302 1555 1555 2.34 LINK OD1 ASP B 98 CA CA B 301 1555 1555 2.31 LINK O ILE B 99 CA CA B 301 1555 1555 2.41 LINK OD1 ASN B 100 CA CA B 303 1555 1555 2.33 LINK OD1 ASP B 101 CA CA B 301 1555 1555 2.37 LINK OD2 ASP B 101 CA CA B 302 1555 1555 2.40 LINK O ASN B 102 CA CA B 303 1555 1555 2.35 LINK OD1 ASP B 132 CA CA B 303 1555 1555 2.60 LINK OD2 ASP B 132 CA CA B 303 1555 1555 2.40 LINK OD1 ASP B 134 CA CA B 301 1555 1555 2.32 LINK OD2 ASP B 134 CA CA B 303 1555 1555 2.39 LINK O SER B 141 CA CA B 303 1555 1555 2.35 LINK OD2 ASP B 187 CA CA B 303 1555 1555 2.37 LINK CA CA B 302 O HOH B 576 1555 1555 2.34 CISPEP 1 GLY A 109 PRO A 110 0 -3.10 CISPEP 2 GLN A 152 PRO A 153 0 -1.07 CISPEP 3 GLY B 109 PRO B 110 0 2.51 CISPEP 4 GLN B 152 PRO B 153 0 2.73 SITE 1 AC1 6 GLU A 11 GLU A 12 ASP A 64 GLU A 66 SITE 2 AC1 6 ASP A 101 HOH A 639 SITE 1 AC2 6 GLU A 11 GLU A 66 ASP A 98 ILE A 99 SITE 2 AC2 6 ASP A 101 ASP A 134 SITE 1 AC3 6 ASN A 100 ASN A 102 ASP A 132 ASP A 134 SITE 2 AC3 6 SER A 141 ASP A 187 SITE 1 AC4 6 GLU B 11 GLU B 66 ASP B 98 ILE B 99 SITE 2 AC4 6 ASP B 101 ASP B 134 SITE 1 AC5 6 GLU B 11 GLU B 12 ASP B 64 GLU B 66 SITE 2 AC5 6 ASP B 101 HOH B 576 SITE 1 AC6 6 ASN B 100 ASN B 102 ASP B 132 ASP B 134 SITE 2 AC6 6 SER B 141 ASP B 187 SITE 1 AC7 5 PHE B 106 PRO B 110 THR B 199 SER B 200 SITE 2 AC7 5 HOH B 495 CRYST1 58.304 82.431 93.546 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017151 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012131 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010690 0.00000