HEADER TRANSFERASE/ANTIBIOTIC 22-FEB-18 6CHN TITLE PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE (COAD) IN COMPLEX WITH METHYL TITLE 2 (R)-4-(3-(2-CYANO-1-((5-METHYL-7-OXO-4,7-DIHYDRO-[1,2,4]TRIAZOLO[1,5- TITLE 3 A]PYRIMIDIN-2-YL)AMINO)ETHYL)PHENOXY)PIPERIDINE-1-CARBOXYLATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DEPHOSPHO-COA PYROPHOSPHORYLASE,PANTETHEINE-PHOSPHATE COMPND 5 ADENYLYLTRANSFERASE,PPAT; COMPND 6 EC: 2.7.7.3; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI (STRAIN K12); SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: COAD, KDTB, YICA, B3634, JW3609; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DEPHOSPHO-COA PYROPHOSPHORYLASE, PANTETHEINE-PHOSPHATE KEYWDS 2 ADENYLYLTRANSFERASE, PPAT CAAD, FBDD GRAM-NEGATIVE ANTIBACTERIAL KEYWDS 3 ANTIBIOTIC, TRANSFERASE TRANSFERASE-ANTIBIOTIC COMPLEX, TRANSFERASE- KEYWDS 4 ANTIBIOTIC COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.MAMO,B.A.APPLETON REVDAT 3 13-MAR-24 6CHN 1 REMARK REVDAT 2 09-MAY-18 6CHN 1 JRNL REVDAT 1 04-APR-18 6CHN 0 JRNL AUTH C.K.SKEPPER,R.J.MOREAU,B.A.APPLETON,B.M.BENTON,J.E.DRUMM, JRNL AUTH 2 B.Y.FENG,M.GENG,C.HU,C.LI,A.LINGEL,Y.LU,M.MAMO,W.MERGO, JRNL AUTH 3 M.MOSTAFAVI,C.M.RATH,M.STEFFEK,K.T.TAKEOKA,K.UEHARA,L.WANG, JRNL AUTH 4 J.R.WEI,L.XIE,W.XU,Q.ZHANG,J.DE VICENTE JRNL TITL DISCOVERY AND OPTIMIZATION OF PHOSPHOPANTETHEINE JRNL TITL 2 ADENYLYLTRANSFERASE INHIBITORS WITH GRAM-NEGATIVE JRNL TITL 3 ANTIBACTERIAL ACTIVITY. JRNL REF J. MED. CHEM. V. 61 3325 2018 JRNL REFN ISSN 1520-4804 JRNL PMID 29551072 JRNL DOI 10.1021/ACS.JMEDCHEM.7B01861 REMARK 2 REMARK 2 RESOLUTION. 2.03 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.15 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 26420 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.910 REMARK 3 FREE R VALUE TEST SET COUNT : 1298 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2486 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 118 REMARK 3 SOLVENT ATOMS : 268 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.79 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6CHN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1000232642. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-DEC-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : X-AREA REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.32 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26447 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.030 REMARK 200 RESOLUTION RANGE LOW (A) : 42.630 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.30 REMARK 200 R MERGE (I) : 0.04300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 39.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.03 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 10.10 REMARK 200 R MERGE FOR SHELL (I) : 0.15100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.3 M AMMONIUM SULFATE, 0.2 M REMARK 280 POTASSIUM THIOCYANATE, 0.2 M POTASSIUM BROMIDE, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 67.40200 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 67.40200 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 67.40200 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 67.40200 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 67.40200 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 67.40200 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 67.40200 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 67.40200 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 67.40200 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 67.40200 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 67.40200 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 67.40200 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 67.40200 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 67.40200 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 67.40200 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 67.40200 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 67.40200 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 67.40200 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 67.40200 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 67.40200 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 67.40200 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 67.40200 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 67.40200 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 67.40200 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 67.40200 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 67.40200 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 67.40200 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 67.40200 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 67.40200 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 67.40200 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 67.40200 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 67.40200 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 67.40200 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 67.40200 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 67.40200 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 67.40200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 21660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -353.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 134.80400 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 -134.80400 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 134.80400 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 -134.80400 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: 24-MERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 72010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 151620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -1091.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 269.60800 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 269.60800 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 5 0.000000 0.000000 1.000000 134.80400 REMARK 350 BIOMT2 5 1.000000 0.000000 0.000000 -134.80400 REMARK 350 BIOMT3 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 6 0.000000 0.000000 1.000000 134.80400 REMARK 350 BIOMT2 6 -1.000000 0.000000 0.000000 134.80400 REMARK 350 BIOMT3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 7 0.000000 0.000000 -1.000000 134.80400 REMARK 350 BIOMT2 7 -1.000000 0.000000 0.000000 134.80400 REMARK 350 BIOMT3 7 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 8 0.000000 0.000000 -1.000000 134.80400 REMARK 350 BIOMT2 8 1.000000 0.000000 0.000000 -134.80400 REMARK 350 BIOMT3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 9 0.000000 1.000000 0.000000 134.80400 REMARK 350 BIOMT2 9 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 9 1.000000 0.000000 0.000000 -134.80400 REMARK 350 BIOMT1 10 0.000000 -1.000000 0.000000 134.80400 REMARK 350 BIOMT2 10 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 10 -1.000000 0.000000 0.000000 134.80400 REMARK 350 BIOMT1 11 0.000000 1.000000 0.000000 134.80400 REMARK 350 BIOMT2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 11 -1.000000 0.000000 0.000000 134.80400 REMARK 350 BIOMT1 12 0.000000 -1.000000 0.000000 134.80400 REMARK 350 BIOMT2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 12 1.000000 0.000000 0.000000 -134.80400 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 13 1.000000 0.000000 0.000000 -67.40200 REMARK 350 BIOMT2 13 0.000000 1.000000 0.000000 -67.40200 REMARK 350 BIOMT3 13 0.000000 0.000000 1.000000 -67.40200 REMARK 350 BIOMT1 14 -1.000000 0.000000 0.000000 337.01000 REMARK 350 BIOMT2 14 0.000000 -1.000000 0.000000 67.40200 REMARK 350 BIOMT3 14 0.000000 0.000000 1.000000 -67.40200 REMARK 350 BIOMT1 15 -1.000000 0.000000 0.000000 337.01000 REMARK 350 BIOMT2 15 0.000000 1.000000 0.000000 -67.40200 REMARK 350 BIOMT3 15 0.000000 0.000000 -1.000000 67.40200 REMARK 350 BIOMT1 16 1.000000 0.000000 0.000000 -67.40200 REMARK 350 BIOMT2 16 0.000000 -1.000000 0.000000 67.40200 REMARK 350 BIOMT3 16 0.000000 0.000000 -1.000000 67.40200 REMARK 350 BIOMT1 17 0.000000 0.000000 1.000000 67.40200 REMARK 350 BIOMT2 17 1.000000 0.000000 0.000000 -202.20600 REMARK 350 BIOMT3 17 0.000000 1.000000 0.000000 -67.40200 REMARK 350 BIOMT1 18 0.000000 0.000000 1.000000 67.40200 REMARK 350 BIOMT2 18 -1.000000 0.000000 0.000000 202.20600 REMARK 350 BIOMT3 18 0.000000 -1.000000 0.000000 67.40200 REMARK 350 BIOMT1 19 0.000000 0.000000 -1.000000 202.20600 REMARK 350 BIOMT2 19 -1.000000 0.000000 0.000000 202.20600 REMARK 350 BIOMT3 19 0.000000 1.000000 0.000000 -67.40200 REMARK 350 BIOMT1 20 0.000000 0.000000 -1.000000 202.20600 REMARK 350 BIOMT2 20 1.000000 0.000000 0.000000 -202.20600 REMARK 350 BIOMT3 20 0.000000 -1.000000 0.000000 67.40200 REMARK 350 BIOMT1 21 0.000000 1.000000 0.000000 67.40200 REMARK 350 BIOMT2 21 0.000000 0.000000 1.000000 -67.40200 REMARK 350 BIOMT3 21 1.000000 0.000000 0.000000 -202.20600 REMARK 350 BIOMT1 22 0.000000 -1.000000 0.000000 202.20600 REMARK 350 BIOMT2 22 0.000000 0.000000 1.000000 -67.40200 REMARK 350 BIOMT3 22 -1.000000 0.000000 0.000000 202.20600 REMARK 350 BIOMT1 23 0.000000 1.000000 0.000000 67.40200 REMARK 350 BIOMT2 23 0.000000 0.000000 -1.000000 67.40200 REMARK 350 BIOMT3 23 -1.000000 0.000000 0.000000 202.20600 REMARK 350 BIOMT1 24 0.000000 -1.000000 0.000000 202.20600 REMARK 350 BIOMT2 24 0.000000 0.000000 -1.000000 67.40200 REMARK 350 BIOMT3 24 1.000000 0.000000 0.000000 -202.20600 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 416 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 2 REMARK 465 VAL A 160 REMARK 465 ASP A 161 REMARK 465 ASP B 161 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 42 CG CD CE NZ REMARK 470 LYS B 42 CG CD CE NZ REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ILE B 87 N CA C O CB CG1 CG2 REMARK 480 ILE B 87 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 11 56.39 39.18 REMARK 500 ASP A 12 72.01 -112.58 REMARK 500 ARG A 91 -80.46 -129.05 REMARK 500 ASP B 12 75.88 -119.18 REMARK 500 GLN B 139 39.57 76.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 425 DISTANCE = 5.90 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PG4 A 205 REMARK 610 PG4 B 204 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue F1D A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue F1D B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 B 204 DBREF 6CHN A 1 159 UNP P0A6I6 COAD_ECOLI 1 159 DBREF 6CHN B 1 159 UNP P0A6I6 COAD_ECOLI 1 159 SEQADV 6CHN VAL A 160 UNP P0A6I6 EXPRESSION TAG SEQADV 6CHN ASP A 161 UNP P0A6I6 EXPRESSION TAG SEQADV 6CHN VAL B 160 UNP P0A6I6 EXPRESSION TAG SEQADV 6CHN ASP B 161 UNP P0A6I6 EXPRESSION TAG SEQRES 1 A 161 MET GLN LYS ARG ALA ILE TYR PRO GLY THR PHE ASP PRO SEQRES 2 A 161 ILE THR ASN GLY HIS ILE ASP ILE VAL THR ARG ALA THR SEQRES 3 A 161 GLN MET PHE ASP HIS VAL ILE LEU ALA ILE ALA ALA SER SEQRES 4 A 161 PRO SER LYS LYS PRO MET PHE THR LEU GLU GLU ARG VAL SEQRES 5 A 161 ALA LEU ALA GLN GLN ALA THR ALA HIS LEU GLY ASN VAL SEQRES 6 A 161 GLU VAL VAL GLY PHE SER ASP LEU MET ALA ASN PHE ALA SEQRES 7 A 161 ARG ASN GLN HIS ALA THR VAL LEU ILE ARG GLY LEU ARG SEQRES 8 A 161 ALA VAL ALA ASP PHE GLU TYR GLU MET GLN LEU ALA HIS SEQRES 9 A 161 MET ASN ARG HIS LEU MET PRO GLU LEU GLU SER VAL PHE SEQRES 10 A 161 LEU MET PRO SER LYS GLU TRP SER PHE ILE SER SER SER SEQRES 11 A 161 LEU VAL LYS GLU VAL ALA ARG HIS GLN GLY ASP VAL THR SEQRES 12 A 161 HIS PHE LEU PRO GLU ASN VAL HIS GLN ALA LEU MET ALA SEQRES 13 A 161 LYS LEU ALA VAL ASP SEQRES 1 B 161 MET GLN LYS ARG ALA ILE TYR PRO GLY THR PHE ASP PRO SEQRES 2 B 161 ILE THR ASN GLY HIS ILE ASP ILE VAL THR ARG ALA THR SEQRES 3 B 161 GLN MET PHE ASP HIS VAL ILE LEU ALA ILE ALA ALA SER SEQRES 4 B 161 PRO SER LYS LYS PRO MET PHE THR LEU GLU GLU ARG VAL SEQRES 5 B 161 ALA LEU ALA GLN GLN ALA THR ALA HIS LEU GLY ASN VAL SEQRES 6 B 161 GLU VAL VAL GLY PHE SER ASP LEU MET ALA ASN PHE ALA SEQRES 7 B 161 ARG ASN GLN HIS ALA THR VAL LEU ILE ARG GLY LEU ARG SEQRES 8 B 161 ALA VAL ALA ASP PHE GLU TYR GLU MET GLN LEU ALA HIS SEQRES 9 B 161 MET ASN ARG HIS LEU MET PRO GLU LEU GLU SER VAL PHE SEQRES 10 B 161 LEU MET PRO SER LYS GLU TRP SER PHE ILE SER SER SER SEQRES 11 B 161 LEU VAL LYS GLU VAL ALA ARG HIS GLN GLY ASP VAL THR SEQRES 12 B 161 HIS PHE LEU PRO GLU ASN VAL HIS GLN ALA LEU MET ALA SEQRES 13 B 161 LYS LEU ALA VAL ASP HET F1D A 201 33 HET SO4 A 202 5 HET SO4 A 203 5 HET PEG A 204 7 HET PG4 A 205 10 HET SO4 A 206 5 HET F1D B 201 33 HET SO4 B 202 5 HET SO4 B 203 5 HET PG4 B 204 10 HETNAM F1D METHYL 4-(3-{(1R)-2-CYANO-1-[(5-METHYL-7-OXO-6,7- HETNAM 2 F1D DIHYDRO[1,2,4]TRIAZOLO[1,5-A]PYRIMIDIN-2-YL) HETNAM 3 F1D AMINO]ETHYL}PHENOXY)PIPERIDINE-1-CARBOXYLATE HETNAM SO4 SULFATE ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM PG4 TETRAETHYLENE GLYCOL FORMUL 3 F1D 2(C22 H25 N7 O4) FORMUL 4 SO4 5(O4 S 2-) FORMUL 6 PEG C4 H10 O3 FORMUL 7 PG4 2(C8 H18 O5) FORMUL 13 HOH *268(H2 O) HELIX 1 AA1 THR A 15 GLN A 27 1 13 HELIX 2 AA2 SER A 39 LYS A 43 5 5 HELIX 3 AA3 THR A 47 ALA A 60 1 14 HELIX 4 AA4 LEU A 73 GLN A 81 1 9 HELIX 5 AA5 ALA A 92 MET A 110 1 19 HELIX 6 AA6 SER A 121 SER A 125 5 5 HELIX 7 AA7 SER A 128 HIS A 138 1 11 HELIX 8 AA8 VAL A 142 LEU A 146 5 5 HELIX 9 AA9 PRO A 147 ALA A 159 1 13 HELIX 10 AB1 THR B 15 PHE B 29 1 15 HELIX 11 AB2 THR B 47 ALA B 60 1 14 HELIX 12 AB3 LEU B 73 GLN B 81 1 9 HELIX 13 AB4 ALA B 92 MET B 110 1 19 HELIX 14 AB5 SER B 121 SER B 125 5 5 HELIX 15 AB6 SER B 128 HIS B 138 1 11 HELIX 16 AB7 VAL B 142 LEU B 146 5 5 HELIX 17 AB8 PRO B 147 VAL B 160 1 14 SHEET 1 AA1 5 VAL A 65 PHE A 70 0 SHEET 2 AA1 5 HIS A 31 ALA A 37 1 N ILE A 36 O VAL A 68 SHEET 3 AA1 5 ARG A 4 GLY A 9 1 N TYR A 7 O ILE A 33 SHEET 4 AA1 5 VAL A 85 GLY A 89 1 O ILE A 87 N ILE A 6 SHEET 5 AA1 5 GLU A 114 LEU A 118 1 O VAL A 116 N LEU A 86 SHEET 1 AA2 5 VAL B 65 PHE B 70 0 SHEET 2 AA2 5 HIS B 31 ALA B 37 1 N ILE B 36 O VAL B 68 SHEET 3 AA2 5 ARG B 4 GLY B 9 1 N TYR B 7 O ILE B 33 SHEET 4 AA2 5 VAL B 85 GLY B 89 1 O ILE B 87 N ILE B 6 SHEET 5 AA2 5 GLU B 114 LEU B 118 1 O VAL B 116 N LEU B 86 CISPEP 1 ASP A 12 PRO A 13 0 -1.01 CISPEP 2 ASP B 12 PRO B 13 0 -3.02 SITE 1 AC1 20 ALA A 37 ALA A 38 SER A 39 PHE A 70 SITE 2 AC1 20 SER A 71 ASP A 72 LEU A 73 MET A 74 SITE 3 AC1 20 LEU A 86 ARG A 88 LEU A 102 MET A 105 SITE 4 AC1 20 ASN A 106 GLU A 134 HIS A 138 SO4 A 202 SITE 5 AC1 20 HOH A 306 HOH A 307 HOH A 338 HOH A 346 SITE 1 AC2 6 SER A 39 PRO A 40 SER A 41 HIS A 138 SITE 2 AC2 6 F1D A 201 HOH A 326 SITE 1 AC3 7 HIS A 18 ARG A 91 SER A 128 SER A 129 SITE 2 AC3 7 HOH A 314 HOH A 361 HOH A 364 SITE 1 AC4 4 HIS A 108 PRO A 111 HOH A 332 HIS B 82 SITE 1 AC5 4 ILE A 19 ASP A 20 GLN A 27 HOH A 308 SITE 1 AC6 6 SER A 121 LYS A 122 HOH A 321 HIS B 104 SITE 2 AC6 6 ARG B 107 HOH B 330 SITE 1 AC7 15 ALA B 37 ALA B 38 SER B 39 SER B 71 SITE 2 AC7 15 ASP B 72 LEU B 73 MET B 74 ARG B 88 SITE 3 AC7 15 LEU B 102 ASN B 106 GLU B 134 HIS B 138 SITE 4 AC7 15 HOH B 302 HOH B 355 HOH B 390 SITE 1 AC8 8 HIS B 18 ARG B 91 SER B 128 SER B 129 SITE 2 AC8 8 HOH B 308 HOH B 314 HOH B 372 HOH B 377 SITE 1 AC9 6 HIS A 104 ARG A 107 HOH A 302 SER B 121 SITE 2 AC9 6 LYS B 122 HOH B 306 SITE 1 AD1 4 ILE B 19 ASP B 20 ARG B 24 GLN B 27 CRYST1 134.804 134.804 134.804 90.00 90.00 90.00 I 2 3 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007418 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007418 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007418 0.00000