HEADER TRANSCRIPTION 28-FEB-18 6CKQ TITLE SOLUTION STRUCTURE OF THE BURKHOLDERIA THAILANDENSIS TRANSCRIPTION TITLE 2 ANTITERMINATION PROTEIN NUSB (BTH_I1529) - SEATTLE STRUCTURAL TITLE 3 GENOMICS CENTER FOR INFECTIOUS DISEASE TARGET BUTHA.17903.A COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTION ANTITERMINATION PROTEIN NUSB; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ANTITERMINATION FACTOR NUSB; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA THAILANDENSIS (STRAIN ATCC 700388 SOURCE 3 / DSM 13276 / CIP 106301 / E264); SOURCE 4 ORGANISM_TAXID: 271848; SOURCE 5 STRAIN: ATCC 700388 / DSM 13276 / CIP 106301 / E264; SOURCE 6 GENE: NUSB, BTH_I1529; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS INFECTIOUS DISEASE MODEL, TRANSCRIPTION ANTITERMNATION, NUSA, KEYWDS 2 STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 3 INFECTIOUS DISEASE, SSGCID, TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR G.W.BUCHKO,SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE AUTHOR 2 (SSGCID) REVDAT 3 14-JUN-23 6CKQ 1 REMARK REVDAT 2 18-DEC-19 6CKQ 1 REMARK REVDAT 1 04-APR-18 6CKQ 0 JRNL AUTH G.W.BUCHKO,SEATTLE STRUCTURAL GENOMICS CENTER FOR JRNL AUTH 2 INFECTIOUS DISEASE (SSGCID) JRNL TITL SOLUTION STRUCTURE OF THE BURKHOLDERIA THAILANDENSIS JRNL TITL 2 TRANSCRIPTION ANTITERMINATION PROTEIN NUSB (BTH_I1529). JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1, CNS 1.1 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: STRUCTURE DETERMINATION WAS PERFORMED REMARK 3 ITERATIVELY USING CYANA (AUTOMATED NOESY ASSIGNMENTS). A TOTAL REMARK 3 OF 20 STRUCTURES OUT OF 100 WITH LOWEST TARGET FUNCTION FROM THE REMARK 3 FINAL CYANA CALCULATION WERE TAKEN AND REFINED BY RESTRAINED REMARK 3 MOLECULAR DYNAMICS/ENERGY MINIMIZATION IN EXPLICIT WATER (CNS) REMARK 3 AFTER ADDING 5% TO THE UPPER BOUNDARY LIMIT OF THE DISTANCE REMARK 3 RESTRAINTS AND THE VDW REMARK 4 REMARK 4 6CKQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1000232899. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 0.12 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1 MM [U-99% 13C; U-99% 15N] REMARK 210 NUSB, 100 MM SODIUM CHLORIDE, 20 REMARK 210 MM TRIS, 1 MM DTT, 93% H2O/7% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 3D HNCO; 3D HNCACB; 3D REMARK 210 C(CO)NH; 3D 1H-15N NOESY; 3D 1H- REMARK 210 13C NOESY ALIPHATIC; 3D 1H-13C REMARK 210 NOESY AROMATIC; DEUTERIUM REMARK 210 EXCHANGE; 2D DELTAS REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 750 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : VXRS REMARK 210 SPECTROMETER MANUFACTURER : VARIAN; AGILENT REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY 3.13, PSVS 1.5, FELIX REMARK 210 2007 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 48 153.00 175.98 REMARK 500 1 ARG A 139 61.32 -162.07 REMARK 500 2 ASP A 48 136.58 -176.29 REMARK 500 3 SER A 4 33.79 -144.69 REMARK 500 3 MET A 5 89.58 -67.24 REMARK 500 3 ALA A 29 -85.21 -70.72 REMARK 500 3 GLN A 80 -75.67 -62.78 REMARK 500 3 ARG A 139 102.56 -161.98 REMARK 500 3 ALA A 145 16.89 55.51 REMARK 500 4 PRO A 2 86.40 -65.39 REMARK 500 4 ALA A 145 16.81 55.76 REMARK 500 5 LYS A 7 103.77 62.83 REMARK 500 5 ASP A 48 143.60 83.72 REMARK 500 5 GLN A 99 57.54 -141.20 REMARK 500 5 ALA A 145 18.80 58.54 REMARK 500 6 MET A 5 82.63 -69.03 REMARK 500 6 ASP A 48 146.34 159.18 REMARK 500 6 ARG A 139 76.83 -161.94 REMARK 500 7 SER A 4 -37.59 173.78 REMARK 500 7 MET A 5 94.09 -68.02 REMARK 500 7 ASP A 48 154.63 164.32 REMARK 500 8 PRO A 2 93.51 -65.95 REMARK 500 8 ALA A 29 -77.98 -51.99 REMARK 500 8 ALA A 30 145.84 -174.99 REMARK 500 8 ASP A 48 146.60 166.36 REMARK 500 8 GLN A 99 37.03 -141.81 REMARK 500 8 ARG A 139 88.26 -152.51 REMARK 500 8 ALA A 145 29.96 49.97 REMARK 500 8 ARG A 147 99.82 -65.07 REMARK 500 9 LYS A 6 -55.27 -143.62 REMARK 500 9 ASP A 48 142.15 -175.68 REMARK 500 9 GLN A 99 34.79 -140.73 REMARK 500 9 ARG A 139 84.33 -157.52 REMARK 500 10 LYS A 6 -36.48 -150.65 REMARK 500 10 LYS A 7 107.30 -53.02 REMARK 500 10 GLN A 99 23.29 -141.05 REMARK 500 10 ARG A 139 83.38 -157.49 REMARK 500 10 ARG A 146 106.75 -57.10 REMARK 500 11 PRO A 2 -163.04 -78.00 REMARK 500 11 SER A 4 74.54 62.98 REMARK 500 11 ALA A 29 -78.93 -58.52 REMARK 500 11 ALA A 30 142.64 -175.33 REMARK 500 11 ASP A 48 159.13 176.40 REMARK 500 11 LEU A 81 170.96 66.85 REMARK 500 11 ARG A 139 78.75 -162.04 REMARK 500 11 ALA A 145 83.85 -52.60 REMARK 500 12 MET A 5 -83.47 55.50 REMARK 500 12 LYS A 6 77.01 48.88 REMARK 500 12 ALA A 29 -76.48 -58.11 REMARK 500 12 ALA A 30 140.40 -177.35 REMARK 500 REMARK 500 THIS ENTRY HAS 90 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30421 RELATED DB: BMRB REMARK 900 SOLUTION STRUCTURE OF THE BURKHOLDERIA THAILANDENSIS TRANSCRIPTION REMARK 900 ANTITERMINATION PROTEIN NUSB (BTH_I1529) - SEATTLE STRUCTURAL REMARK 900 GENOMICS CENTER FOR INFECTIOUS DISEASE TARGET BUTHA.17903.A DBREF 6CKQ A 5 149 UNP Q2SYC5 NUSB_BURTA 1 145 SEQADV 6CKQ GLY A 1 UNP Q2SYC5 EXPRESSION TAG SEQADV 6CKQ PRO A 2 UNP Q2SYC5 EXPRESSION TAG SEQADV 6CKQ GLY A 3 UNP Q2SYC5 EXPRESSION TAG SEQADV 6CKQ SER A 4 UNP Q2SYC5 EXPRESSION TAG SEQRES 1 A 149 GLY PRO GLY SER MET LYS LYS SER ALA ARG ARG GLN SER SEQRES 2 A 149 ARG GLU LEU ALA THR GLN GLY LEU TYR GLN TRP LEU LEU SEQRES 3 A 149 SER ASN ALA ALA PRO GLY GLU ILE ASP ALA GLN LEU ARG SEQRES 4 A 149 GLY ALA LEU GLY TYR ASP LYS ALA ASP LYS THR LEU LEU SEQRES 5 A 149 ASP THR ILE LEU HIS GLY VAL ILE ARG GLU HIS ALA THR SEQRES 6 A 149 LEU ALA GLU ALA ILE SER PRO SER LEU ASP ARG PRO ILE SEQRES 7 A 149 ASP GLN LEU SER PRO VAL GLU ARG ALA VAL LEU LEU ILE SEQRES 8 A 149 ALA THR TYR GLU LEU THR HIS GLN ILE GLU THR PRO TYR SEQRES 9 A 149 ARG VAL ILE ILE ASN GLU ALA VAL GLU LEU ALA LYS THR SEQRES 10 A 149 PHE GLY GLY SER ASP GLY TYR LYS TYR VAL ASN GLY VAL SEQRES 11 A 149 LEU ASP LYS LEU ALA VAL LYS LEU ARG PRO ALA GLU THR SEQRES 12 A 149 GLN ALA ARG ARG GLY ALA HELIX 1 AA1 ALA A 9 ASN A 28 1 20 HELIX 2 AA2 ALA A 30 ALA A 41 1 12 HELIX 3 AA3 LEU A 42 ALA A 47 1 6 HELIX 4 AA4 THR A 50 LEU A 74 1 25 HELIX 5 AA5 PRO A 77 LEU A 81 5 5 HELIX 6 AA6 SER A 82 ILE A 100 1 19 HELIX 7 AA7 PRO A 103 GLY A 119 1 17 HELIX 8 AA8 GLY A 119 ARG A 139 1 21 HELIX 9 AA9 ARG A 139 GLN A 144 1 6 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1