HEADER APOPTOSIS 01-MAR-18 6CKV TITLE SOLUTION NMR STRUCTURE OF HUMAN BOK COMPND MOL_ID: 1; COMPND 2 MOLECULE: BCL-2-RELATED OVARIAN KILLER PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 21-177; COMPND 5 SYNONYM: HBOK,BCL-2-LIKE PROTEIN 9,BCL2-L-9; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BOK, BCL2L9; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 536; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 362663 KEYWDS APOPTOSIS EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.R.GRACE,J.ZHENG,T.MOLDOVEANU REVDAT 5 14-JUN-23 6CKV 1 REMARK REVDAT 4 04-DEC-19 6CKV 1 REMARK REVDAT 3 04-JUL-18 6CKV 1 JRNL REVDAT 2 23-MAY-18 6CKV 1 AUTHOR JRNL REVDAT 1 09-MAY-18 6CKV 0 JRNL AUTH J.H.ZHENG,C.R.GRACE,C.D.GUIBAO,D.E.MCNAMARA,F.LLAMBI, JRNL AUTH 2 Y.M.WANG,T.CHEN,T.MOLDOVEANU JRNL TITL INTRINSIC INSTABILITY OF BOK ENABLES MEMBRANE JRNL TITL 2 PERMEABILIZATION IN APOPTOSIS. JRNL REF CELL REP V. 23 2083 2018 JRNL REFN ESSN 2211-1247 JRNL PMID 29768206 JRNL DOI 10.1016/J.CELREP.2018.04.060 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6CKV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1000232903. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 150 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-99% 13C; U-99% 15N] REMARK 210 HBOK, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D-15N-NOESY; 3D-13C-NOESY; 3D REMARK 210 -NOESY-ARO; 3D CBCA(CO)NH; 3D REMARK 210 HNCACB REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE II; AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CARA 1.9, CYANA 2.1, TOPSPIN 3.5 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET A 20 REMARK 465 SER A 21 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 23 -68.41 72.70 REMARK 500 1 LEU A 48 161.32 62.99 REMARK 500 1 SER A 49 -80.09 -77.27 REMARK 500 1 TRP A 50 106.29 59.68 REMARK 500 1 ALA A 52 161.91 65.44 REMARK 500 1 GLU A 54 60.38 38.91 REMARK 500 1 ARG A 55 60.17 -118.00 REMARK 500 1 PRO A 60 -173.56 -69.72 REMARK 500 1 ARG A 81 77.84 179.96 REMARK 500 1 VAL A 84 64.04 -156.38 REMARK 500 1 ARG A 86 57.58 -169.91 REMARK 500 1 ASN A 87 -25.55 176.99 REMARK 500 1 SER A 95 82.12 65.79 REMARK 500 1 THR A 119 168.98 57.52 REMARK 500 1 ALA A 141 62.59 65.97 REMARK 500 1 GLN A 142 63.36 -174.72 REMARK 500 2 THR A 23 -76.85 -179.44 REMARK 500 2 ALA A 46 -75.76 -51.35 REMARK 500 2 ALA A 52 160.86 64.27 REMARK 500 2 GLU A 54 -76.45 -118.94 REMARK 500 2 ARG A 55 -169.39 179.45 REMARK 500 2 ALA A 56 -169.43 -69.22 REMARK 500 2 VAL A 59 133.44 -177.42 REMARK 500 2 PRO A 60 -169.85 -69.78 REMARK 500 2 ARG A 81 81.14 177.87 REMARK 500 2 VAL A 84 70.90 -154.83 REMARK 500 2 TYR A 85 35.49 -94.10 REMARK 500 2 ARG A 86 -39.65 177.37 REMARK 500 2 SER A 95 81.80 65.65 REMARK 500 2 THR A 119 163.00 60.17 REMARK 500 2 GLN A 142 60.02 -155.75 REMARK 500 2 LYS A 159 -65.13 -124.65 REMARK 500 3 THR A 23 -73.62 -174.22 REMARK 500 3 ALA A 52 160.56 64.49 REMARK 500 3 GLU A 54 91.66 60.88 REMARK 500 3 ARG A 55 67.07 -175.75 REMARK 500 3 ALA A 56 -178.60 -64.22 REMARK 500 3 VAL A 59 133.22 -171.41 REMARK 500 3 PRO A 60 -171.79 -69.79 REMARK 500 3 ARG A 81 78.65 177.91 REMARK 500 3 VAL A 84 -49.64 -147.58 REMARK 500 3 ARG A 86 -50.77 172.70 REMARK 500 3 SER A 95 80.27 63.92 REMARK 500 3 THR A 119 163.91 60.15 REMARK 500 3 ALA A 141 60.83 66.44 REMARK 500 3 GLN A 142 63.97 -172.18 REMARK 500 3 LYS A 159 -65.67 -121.56 REMARK 500 4 THR A 23 -68.38 72.67 REMARK 500 4 SER A 51 21.08 -147.56 REMARK 500 4 ALA A 52 162.23 65.77 REMARK 500 REMARK 500 THIS ENTRY HAS 318 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5WDD RELATED DB: PDB REMARK 900 STRUCTURE OF CHICKEN BOK REMARK 900 RELATED ID: 30423 RELATED DB: BMRB REMARK 900 SOLUTION NMR STRUCTURE OF HUMAN BOK DBREF 6CKV A 21 177 UNP Q9UMX3 BOK_HUMAN 21 177 SEQADV 6CKV MET A 20 UNP Q9UMX3 INITIATING METHIONINE SEQADV 6CKV ALA A 67 UNP Q9UMX3 CYS 67 ENGINEERED MUTATION SEQADV 6CKV ARG A 100 UNP Q9UMX3 PRO 100 ENGINEERED MUTATION SEQADV 6CKV ALA A 137 UNP Q9UMX3 CYS 137 ENGINEERED MUTATION SEQADV 6CKV ALA A 152 UNP Q9UMX3 CYS 152 ENGINEERED MUTATION SEQRES 1 A 158 MET SER PRO THR ASP LYS GLU LEU VAL ALA GLN ALA LYS SEQRES 2 A 158 ALA LEU GLY ARG GLU TYR VAL HIS ALA ARG LEU LEU ARG SEQRES 3 A 158 ALA GLY LEU SER TRP SER ALA PRO GLU ARG ALA ALA PRO SEQRES 4 A 158 VAL PRO GLY ARG LEU ALA GLU VAL ALA ALA VAL LEU LEU SEQRES 5 A 158 ARG LEU GLY ASP GLU LEU GLU MET ILE ARG PRO SER VAL SEQRES 6 A 158 TYR ARG ASN VAL ALA ARG GLN LEU HIS ILE SER LEU GLN SEQRES 7 A 158 SER GLU ARG VAL VAL THR ASP ALA PHE LEU ALA VAL ALA SEQRES 8 A 158 GLY HIS ILE PHE SER ALA GLY ILE THR TRP GLY LYS VAL SEQRES 9 A 158 VAL SER LEU TYR ALA VAL ALA ALA GLY LEU ALA VAL ASP SEQRES 10 A 158 ALA VAL ARG GLN ALA GLN PRO ALA MET VAL HIS ALA LEU SEQRES 11 A 158 VAL ASP ALA LEU GLY GLU PHE VAL ARG LYS THR LEU ALA SEQRES 12 A 158 THR TRP LEU ARG ARG ARG GLY GLY TRP THR ASP VAL LEU SEQRES 13 A 158 LYS CYS HELIX 1 AA1 THR A 23 GLY A 47 1 25 HELIX 2 AA2 PRO A 60 ARG A 81 1 22 HELIX 3 AA3 ASN A 87 LEU A 92 1 6 HELIX 4 AA4 GLU A 99 ALA A 116 1 18 HELIX 5 AA5 THR A 119 GLN A 140 1 22 HELIX 6 AA6 PRO A 143 THR A 160 1 18 HELIX 7 AA7 LEU A 161 GLY A 169 1 9 HELIX 8 AA8 GLY A 170 CYS A 177 5 8 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1