HEADER HYDROLASE/HYDROLASE INHIBITOR 01-MAR-18 6CL0 TITLE HUMAN CASPASE-3 IN COMPLEX WITH AC-ATS009-KE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CASPASE-3 SUBUNIT P17; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CASP-3; COMPND 5 EC: 3.4.22.56; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: CASPASE-3 SUBUNIT P12; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: CASP-3; COMPND 11 EC: 3.4.22.56; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: ACE-1MH-ASP-PF5-PHE-1U8; COMPND 15 CHAIN: C; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CASP3, CPP32; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: CASP3, CPP32; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 18 ORGANISM_TAXID: 32630 KEYWDS CASPASE-3, INHIBITOR, APOPTOSIS, HYDROLASE, HYDROLASE-HYDROLASE KEYWDS 2 INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.T.SOLANIA,G.E.GONZALEZ-PAEZ,D.W.WOLAN REVDAT 7 15-NOV-23 6CL0 1 LINK REVDAT 6 04-OCT-23 6CL0 1 REMARK REVDAT 5 30-SEP-20 6CL0 1 HEADER KEYWDS DBREF SHEET REVDAT 5 2 1 LINK ATOM REVDAT 4 23-SEP-20 6CL0 1 JRNL REVDAT 3 18-DEC-19 6CL0 1 REMARK REVDAT 2 06-NOV-19 6CL0 1 REMARK REVDAT 1 06-MAR-19 6CL0 0 JRNL AUTH A.SOLANIA,G.E.GONZALEZ-PAEZ,D.W.WOLAN JRNL TITL SELECTIVE AND RAPID CELL-PERMEABLE INHIBITOR OF HUMAN JRNL TITL 2 CASPASE-3. JRNL REF ACS CHEM.BIOL. V. 14 2463 2019 JRNL REFN ESSN 1554-8937 JRNL PMID 31334631 JRNL DOI 10.1021/ACSCHEMBIO.9B00564 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_2747: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.07 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.6 REMARK 3 NUMBER OF REFLECTIONS : 40752 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.141 REMARK 3 R VALUE (WORKING SET) : 0.140 REMARK 3 FREE R VALUE : 0.164 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 2057 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.0865 - 3.6980 0.95 2797 166 0.1433 0.1622 REMARK 3 2 3.6980 - 2.9354 0.99 2809 143 0.1396 0.1626 REMARK 3 3 2.9354 - 2.5644 0.95 2653 150 0.1450 0.1521 REMARK 3 4 2.5644 - 2.3300 0.98 2732 153 0.1408 0.1613 REMARK 3 5 2.3300 - 2.1630 0.96 2701 130 0.1291 0.1638 REMARK 3 6 2.1630 - 2.0354 0.96 2700 126 0.1347 0.1486 REMARK 3 7 2.0354 - 1.9335 0.98 2688 164 0.1277 0.1728 REMARK 3 8 1.9335 - 1.8493 0.97 2693 144 0.1403 0.1635 REMARK 3 9 1.8493 - 1.7781 0.94 2587 139 0.1385 0.1567 REMARK 3 10 1.7781 - 1.7168 0.97 2679 128 0.1392 0.1745 REMARK 3 11 1.7168 - 1.6631 0.97 2681 155 0.1392 0.1789 REMARK 3 12 1.6631 - 1.6156 0.96 2669 123 0.1405 0.1872 REMARK 3 13 1.6156 - 1.5730 0.92 2535 132 0.1498 0.1890 REMARK 3 14 1.5730 - 1.5347 0.75 2050 113 0.1598 0.2047 REMARK 3 15 1.5347 - 1.4998 0.62 1721 91 0.1740 0.1890 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.110 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.420 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.62 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.017 2171 REMARK 3 ANGLE : 1.523 2927 REMARK 3 CHIRALITY : 0.129 315 REMARK 3 PLANARITY : 0.010 376 REMARK 3 DIHEDRAL : 3.757 1271 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 29 THROUGH 105 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.5761 9.9821 71.2744 REMARK 3 T TENSOR REMARK 3 T11: 0.3035 T22: 0.2151 REMARK 3 T33: 0.1607 T12: 0.0409 REMARK 3 T13: -0.0150 T23: 0.0244 REMARK 3 L TENSOR REMARK 3 L11: 7.1464 L22: 5.3946 REMARK 3 L33: 3.0076 L12: 3.8277 REMARK 3 L13: 2.6906 L23: -1.0128 REMARK 3 S TENSOR REMARK 3 S11: 0.1173 S12: 0.0063 S13: -0.1119 REMARK 3 S21: 0.2025 S22: 0.1564 S23: -0.1247 REMARK 3 S31: 0.3392 S32: 0.1952 S33: -0.2348 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 106 THROUGH 171 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.0440 19.2289 62.8191 REMARK 3 T TENSOR REMARK 3 T11: 0.1121 T22: 0.1141 REMARK 3 T33: 0.1192 T12: -0.0038 REMARK 3 T13: 0.0251 T23: 0.0015 REMARK 3 L TENSOR REMARK 3 L11: 0.7086 L22: 1.2524 REMARK 3 L33: 0.7863 L12: -0.1365 REMARK 3 L13: -0.0009 L23: -0.2527 REMARK 3 S TENSOR REMARK 3 S11: 0.0362 S12: 0.0046 S13: -0.0176 REMARK 3 S21: 0.0875 S22: 0.0222 S23: 0.1497 REMARK 3 S31: -0.0223 S32: -0.0667 S33: -0.0598 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 172 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.1338 14.2068 55.6226 REMARK 3 T TENSOR REMARK 3 T11: 0.1276 T22: 0.1205 REMARK 3 T33: 0.1298 T12: -0.0018 REMARK 3 T13: 0.0048 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 0.7514 L22: 0.7894 REMARK 3 L33: 0.7069 L12: 0.0311 REMARK 3 L13: -0.0196 L23: -0.0616 REMARK 3 S TENSOR REMARK 3 S11: 0.0033 S12: 0.0559 S13: -0.1170 REMARK 3 S21: 0.0446 S22: 0.0158 S23: 0.0907 REMARK 3 S31: 0.0606 S32: -0.0654 S33: -0.0198 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 198 THROUGH 279 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.0641 20.6438 39.1609 REMARK 3 T TENSOR REMARK 3 T11: 0.1720 T22: 0.1907 REMARK 3 T33: 0.1546 T12: 0.0064 REMARK 3 T13: -0.0140 T23: 0.0442 REMARK 3 L TENSOR REMARK 3 L11: 0.5472 L22: 0.8913 REMARK 3 L33: 0.5747 L12: -0.0979 REMARK 3 L13: -0.5511 L23: 0.2207 REMARK 3 S TENSOR REMARK 3 S11: -0.0017 S12: 0.3534 S13: 0.1842 REMARK 3 S21: -0.2625 S22: -0.0679 S23: 0.0837 REMARK 3 S31: -0.1578 S32: -0.0759 S33: 0.0684 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 403 THROUGH 405 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.0650 23.3374 60.3616 REMARK 3 T TENSOR REMARK 3 T11: 0.1166 T22: 0.1120 REMARK 3 T33: 0.1033 T12: -0.0151 REMARK 3 T13: 0.0065 T23: -0.0055 REMARK 3 L TENSOR REMARK 3 L11: 0.9559 L22: 0.8955 REMARK 3 L33: 1.2321 L12: -0.3521 REMARK 3 L13: 0.6044 L23: -0.5045 REMARK 3 S TENSOR REMARK 3 S11: 0.0151 S12: -0.0296 S13: 0.0243 REMARK 3 S21: 0.1082 S22: 0.0043 S23: -0.0097 REMARK 3 S31: -0.0986 S32: -0.0077 S33: -0.0256 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6CL0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1000232917. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-APR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40755 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.6 REMARK 200 DATA REDUNDANCY : 7.600 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : 0.08300 REMARK 200 FOR THE DATA SET : 28.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 60.2 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.79000 REMARK 200 R SYM FOR SHELL (I) : 0.77400 REMARK 200 FOR SHELL : 3.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4JJE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1:1 DILUTION WITH 0.10 M SODIUM REMARK 280 CITRATE, PH 5.0, 13.6 % PEG6000, 0.010 M DTT, 0.02% NAN3, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 33.55150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 42.07000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 48.19400 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 33.55150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 42.07000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 48.19400 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 33.55150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 42.07000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 48.19400 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 33.55150 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 42.07000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 48.19400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5440 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 255 LIES ON A SPECIAL POSITION. REMARK 400 REMARK 400 COMPOUND REMARK 400 REMARK 400 THE (ACE)(1MH)D(PF5)F(1U8) IS PEPTIDE-LIKE, A MEMBER OF CASPASE REMARK 400 INHIBITOR CLASS. REMARK 400 REMARK 400 GROUP: 1 REMARK 400 NAME: (ACE)(1MH)D(PF5)F(1U8) REMARK 400 CHAIN: C REMARK 400 COMPONENT_1: PEPTIDE LIKE POLYMER REMARK 400 DESCRIPTION: NULL REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 ASN A 3 REMARK 465 THR A 4 REMARK 465 GLU A 5 REMARK 465 ASN A 6 REMARK 465 SER A 7 REMARK 465 VAL A 8 REMARK 465 ASP A 9 REMARK 465 SER A 10 REMARK 465 LYS A 11 REMARK 465 SER A 12 REMARK 465 ILE A 13 REMARK 465 LYS A 14 REMARK 465 ASN A 15 REMARK 465 LEU A 16 REMARK 465 GLU A 17 REMARK 465 PRO A 18 REMARK 465 LYS A 19 REMARK 465 ILE A 20 REMARK 465 ILE A 21 REMARK 465 HIS A 22 REMARK 465 GLY A 23 REMARK 465 SER A 24 REMARK 465 GLU A 25 REMARK 465 SER A 26 REMARK 465 MET A 27 REMARK 465 ASP A 28 REMARK 465 ASP A 175 REMARK 465 HIS B 280 REMARK 465 HIS B 281 REMARK 465 HIS B 282 REMARK 465 HIS B 283 REMARK 465 HIS B 284 REMARK 465 HIS B 285 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 173 CG CD OE1 OE2 REMARK 470 ASP B 180 CG OD1 OD2 REMARK 470 GLU B 279 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 101 O HOH A 201 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 194 CB - CG - CD1 ANGL. DEV. = 10.6 DEGREES REMARK 500 ACE C 1 O - C - N ANGL. DEV. = -14.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 144 150.62 -46.50 REMARK 500 LYS B 229 -34.78 -140.20 REMARK 500 REMARK 500 REMARK: NULL DBREF 6CL0 A 1 175 UNP P42574 CASP3_HUMAN 1 175 DBREF 6CL0 B 176 277 UNP P42574 CASP3_HUMAN 176 277 DBREF 6CL0 C 1 6 PDB 6CL0 6CL0 1 6 SEQADV 6CL0 LEU B 278 UNP P42574 EXPRESSION TAG SEQADV 6CL0 GLU B 279 UNP P42574 EXPRESSION TAG SEQADV 6CL0 HIS B 280 UNP P42574 EXPRESSION TAG SEQADV 6CL0 HIS B 281 UNP P42574 EXPRESSION TAG SEQADV 6CL0 HIS B 282 UNP P42574 EXPRESSION TAG SEQADV 6CL0 HIS B 283 UNP P42574 EXPRESSION TAG SEQADV 6CL0 HIS B 284 UNP P42574 EXPRESSION TAG SEQADV 6CL0 HIS B 285 UNP P42574 EXPRESSION TAG SEQRES 1 A 175 MET GLU ASN THR GLU ASN SER VAL ASP SER LYS SER ILE SEQRES 2 A 175 LYS ASN LEU GLU PRO LYS ILE ILE HIS GLY SER GLU SER SEQRES 3 A 175 MET ASP SER GLY ILE SER LEU ASP ASN SER TYR LYS MET SEQRES 4 A 175 ASP TYR PRO GLU MET GLY LEU CYS ILE ILE ILE ASN ASN SEQRES 5 A 175 LYS ASN PHE HIS LYS SER THR GLY MET THR SER ARG SER SEQRES 6 A 175 GLY THR ASP VAL ASP ALA ALA ASN LEU ARG GLU THR PHE SEQRES 7 A 175 ARG ASN LEU LYS TYR GLU VAL ARG ASN LYS ASN ASP LEU SEQRES 8 A 175 THR ARG GLU GLU ILE VAL GLU LEU MET ARG ASP VAL SER SEQRES 9 A 175 LYS GLU ASP HIS SER LYS ARG SER SER PHE VAL CYS VAL SEQRES 10 A 175 LEU LEU SER HIS GLY GLU GLU GLY ILE ILE PHE GLY THR SEQRES 11 A 175 ASN GLY PRO VAL ASP LEU LYS LYS ILE THR ASN PHE PHE SEQRES 12 A 175 ARG GLY ASP ARG CYS ARG SER LEU THR GLY LYS PRO LYS SEQRES 13 A 175 LEU PHE ILE ILE GLN ALA CYS ARG GLY THR GLU LEU ASP SEQRES 14 A 175 CYS GLY ILE GLU THR ASP SEQRES 1 B 110 SER GLY VAL ASP ASP ASP MET ALA CYS HIS LYS ILE PRO SEQRES 2 B 110 VAL GLU ALA ASP PHE LEU TYR ALA TYR SER THR ALA PRO SEQRES 3 B 110 GLY TYR TYR SER TRP ARG ASN SER LYS ASP GLY SER TRP SEQRES 4 B 110 PHE ILE GLN SER LEU CYS ALA MET LEU LYS GLN TYR ALA SEQRES 5 B 110 ASP LYS LEU GLU PHE MET HIS ILE LEU THR ARG VAL ASN SEQRES 6 B 110 ARG LYS VAL ALA THR GLU PHE GLU SER PHE SER PHE ASP SEQRES 7 B 110 ALA THR PHE HIS ALA LYS LYS GLN ILE PRO CYS ILE VAL SEQRES 8 B 110 SER MET LEU THR LYS GLU LEU TYR PHE TYR HIS LEU GLU SEQRES 9 B 110 HIS HIS HIS HIS HIS HIS SEQRES 1 C 6 ACE 1MH ASP PF5 PHE 1U8 HET ACE C 1 3 HET 1MH C 2 11 HET PF5 C 4 16 HET 1U8 C 6 9 HETNAM ACE ACETYL GROUP HETNAM 1MH 3-PYRIDIN-3-YL-L-ALANINE HETNAM PF5 2,3,4,5,6-PENTAFLUORO-L-PHENYLALANINE HETNAM 1U8 (3S)-3-AMINO-5-[(2,6-DIMETHYLBENZOYL)OXY]-4- HETNAM 2 1U8 OXOPENTANOIC ACID HETSYN PF5 FLUORINATED PHENYLALANINE FORMUL 3 ACE C2 H4 O FORMUL 3 1MH C8 H10 N2 O2 FORMUL 3 PF5 C9 H6 F5 N O2 FORMUL 3 1U8 C14 H17 N O5 FORMUL 4 HOH *249(H2 O) HELIX 1 AA1 HIS A 56 GLY A 60 5 5 HELIX 2 AA2 GLY A 66 LEU A 81 1 16 HELIX 3 AA3 THR A 92 LYS A 105 1 14 HELIX 4 AA4 LEU A 136 PHE A 142 1 7 HELIX 5 AA5 CYS A 148 THR A 152 5 5 HELIX 6 AA6 TRP B 214 ALA B 227 1 14 HELIX 7 AA7 GLU B 231 PHE B 247 1 17 HELIX 8 AA8 ASP B 253 HIS B 257 5 5 SHEET 1 AA1 6 GLU A 84 ASN A 89 0 SHEET 2 AA1 6 GLU A 43 ASN A 51 1 N ASN A 51 O LYS A 88 SHEET 3 AA1 6 ARG A 111 LEU A 119 1 O VAL A 117 N ILE A 48 SHEET 4 AA1 6 LYS A 156 GLN A 161 1 O LEU A 157 N PHE A 114 SHEET 5 AA1 6 PHE B 193 TYR B 197 1 O LEU B 194 N PHE A 158 SHEET 6 AA1 6 CYS B 264 SER B 267 -1 O VAL B 266 N TYR B 195 SHEET 1 AA2 3 GLY A 122 GLU A 123 0 SHEET 2 AA2 3 ILE A 126 GLY A 129 -1 O ILE A 126 N GLU A 123 SHEET 3 AA2 3 GLY A 132 ASP A 135 -1 O GLY A 132 N GLY A 129 SHEET 1 AA3 3 GLY B 212 SER B 213 0 SHEET 2 AA3 3 TRP B 206 ASN B 208 -1 N ASN B 208 O GLY B 212 SHEET 3 AA3 3 ASP C 3 PHE C 5 -1 O PF5 C 4 N ARG B 207 LINK SG CYS A 163 C9 1U8 C 6 1555 1555 1.87 LINK C ACE C 1 N 1MH C 2 1555 1555 1.35 LINK C 1MH C 2 N ASP C 3 1555 1555 1.35 LINK C ASP C 3 N PF5 C 4 1555 1555 1.32 LINK C PF5 C 4 N PHE C 5 1555 1555 1.31 LINK C PHE C 5 N 1U8 C 6 1555 1555 1.34 CRYST1 67.103 84.140 96.388 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014902 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011885 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010375 0.00000