HEADER METAL BINDING PROTEIN 13-MAR-18 6CPD TITLE CRYSTAL STRUCTURE OF PMOD SOLUBLE DOMAIN FROM METHYLOCYSTIS SP. ATCC TITLE 2 49242 (ROCKWELL) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PMOD; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHYLOCYSTIS SP. ATCC 49242; SOURCE 3 ORGANISM_TAXID: 622637; SOURCE 4 GENE: MET49242_1452; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21*; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PSCG-HIS KEYWDS COPPER, CUPREDOXIN, PERIPLASM, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR O.S.FISHER,A.C.ROSENZWEIG REVDAT 2 04-DEC-19 6CPD 1 REMARK REVDAT 1 31-OCT-18 6CPD 0 JRNL AUTH O.S.FISHER,G.E.KENNEY,M.O.ROSS,S.Y.RO,B.E.LEMMA,S.BATELU, JRNL AUTH 2 P.M.THOMAS,V.C.SOSNOWSKI,C.J.DEHART,N.L.KELLEHER, JRNL AUTH 3 T.L.STEMMLER,B.M.HOFFMAN,A.C.ROSENZWEIG JRNL TITL CHARACTERIZATION OF A LONG OVERLOOKED COPPER PROTEIN FROM JRNL TITL 2 METHANE- AND AMMONIA-OXIDIZING BACTERIA. JRNL REF NAT COMMUN V. 9 4276 2018 JRNL REFN ESSN 2041-1723 JRNL PMID 30323281 JRNL DOI 10.1038/S41467-018-06681-5 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.3_1479 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 22019 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.030 REMARK 3 FREE R VALUE TEST SET COUNT : 3792 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.9120 - 5.7022 1.00 1465 139 0.1620 0.1889 REMARK 3 2 5.7022 - 4.5289 1.00 1444 154 0.1295 0.1821 REMARK 3 3 4.5289 - 3.9572 1.00 1453 148 0.1299 0.1503 REMARK 3 4 3.9572 - 3.5958 1.00 1461 144 0.1512 0.1608 REMARK 3 5 3.5958 - 3.3382 1.00 1440 144 0.1557 0.1899 REMARK 3 6 3.3382 - 3.1415 1.00 1464 148 0.1571 0.2068 REMARK 3 7 3.1415 - 2.9843 1.00 1462 140 0.1881 0.2131 REMARK 3 8 2.9843 - 2.8544 1.00 1442 146 0.1938 0.2062 REMARK 3 9 2.8544 - 2.7446 1.00 1457 144 0.1836 0.2501 REMARK 3 10 2.7446 - 2.6499 1.00 1469 144 0.1816 0.2094 REMARK 3 11 2.6499 - 2.5671 1.00 1449 143 0.1831 0.2428 REMARK 3 12 2.5671 - 2.4937 1.00 1454 140 0.1970 0.2127 REMARK 3 13 2.4937 - 2.4281 1.00 1441 142 0.1961 0.2425 REMARK 3 14 2.4281 - 2.3689 1.00 1485 138 0.2011 0.2648 REMARK 3 15 2.3689 - 2.3150 1.00 1416 146 0.1898 0.2394 REMARK 3 16 2.3150 - 2.2658 1.00 1460 152 0.1958 0.2523 REMARK 3 17 2.2658 - 2.2204 1.00 1451 144 0.2064 0.2656 REMARK 3 18 2.2204 - 2.1785 1.00 1455 150 0.2036 0.2583 REMARK 3 19 2.1785 - 2.1396 0.99 1426 138 0.2077 0.2883 REMARK 3 20 2.1396 - 2.1034 0.97 1404 146 0.1964 0.2606 REMARK 3 21 2.1034 - 2.0694 0.97 1478 135 0.2088 0.2097 REMARK 3 22 2.0694 - 2.0376 0.96 1355 148 0.2149 0.2842 REMARK 3 23 2.0376 - 2.0076 0.94 1379 132 0.2131 0.2969 REMARK 3 24 2.0076 - 1.9794 0.91 1302 122 0.2212 0.3010 REMARK 3 25 1.9794 - 1.9526 0.89 1299 134 0.2478 0.2856 REMARK 3 26 1.9526 - 1.9273 0.85 1236 116 0.2741 0.3036 REMARK 3 27 1.9273 - 1.9032 0.78 1145 115 0.3288 0.3263 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.180 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.25 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2058 REMARK 3 ANGLE : 1.261 2780 REMARK 3 CHIRALITY : 0.052 305 REMARK 3 PLANARITY : 0.006 363 REMARK 3 DIHEDRAL : 13.026 772 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 38 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.9285 33.4362 12.0078 REMARK 3 T TENSOR REMARK 3 T11: 0.2207 T22: 0.3528 REMARK 3 T33: 0.2246 T12: 0.0683 REMARK 3 T13: 0.0224 T23: -0.0006 REMARK 3 L TENSOR REMARK 3 L11: 2.7823 L22: 4.0660 REMARK 3 L33: 8.3084 L12: -0.8613 REMARK 3 L13: -2.1766 L23: -0.5722 REMARK 3 S TENSOR REMARK 3 S11: 0.2945 S12: 0.2077 S13: -0.0174 REMARK 3 S21: -0.2371 S22: -0.2273 S23: -0.2817 REMARK 3 S31: 0.6686 S32: 1.1242 S33: -0.0681 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 66 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.2962 28.0353 12.9244 REMARK 3 T TENSOR REMARK 3 T11: 0.1945 T22: 0.2851 REMARK 3 T33: 0.2155 T12: 0.0239 REMARK 3 T13: 0.0246 T23: -0.0138 REMARK 3 L TENSOR REMARK 3 L11: 6.1217 L22: 6.4776 REMARK 3 L33: 2.7725 L12: -2.3486 REMARK 3 L13: 2.3432 L23: -1.4983 REMARK 3 S TENSOR REMARK 3 S11: 0.0572 S12: -0.1008 S13: -0.2219 REMARK 3 S21: 0.1871 S22: 0.0935 S23: -0.2558 REMARK 3 S31: -0.0464 S32: 0.4073 S33: -0.1637 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 88 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.6836 22.2985 12.9323 REMARK 3 T TENSOR REMARK 3 T11: 0.3449 T22: 0.2263 REMARK 3 T33: 0.2871 T12: -0.0025 REMARK 3 T13: 0.0242 T23: -0.0459 REMARK 3 L TENSOR REMARK 3 L11: 6.2633 L22: 2.7911 REMARK 3 L33: 3.9179 L12: 0.3128 REMARK 3 L13: 0.6619 L23: 1.7847 REMARK 3 S TENSOR REMARK 3 S11: -0.0290 S12: 0.0255 S13: -0.5650 REMARK 3 S21: 0.4151 S22: -0.1677 S23: 0.1399 REMARK 3 S31: 0.6067 S32: -0.2950 S33: 0.1967 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 138 THROUGH 163 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.0871 26.5999 19.0736 REMARK 3 T TENSOR REMARK 3 T11: 0.2781 T22: 0.2512 REMARK 3 T33: 0.2480 T12: -0.0166 REMARK 3 T13: 0.0471 T23: -0.0355 REMARK 3 L TENSOR REMARK 3 L11: 7.5996 L22: 4.6137 REMARK 3 L33: 8.4078 L12: -1.0984 REMARK 3 L13: 2.1533 L23: -0.2282 REMARK 3 S TENSOR REMARK 3 S11: -0.0744 S12: -0.5247 S13: -0.3053 REMARK 3 S21: 0.7494 S22: -0.2132 S23: 0.1346 REMARK 3 S31: 0.2573 S32: -0.3148 S33: 0.2533 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 37 THROUGH 55 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.6232 42.2678 18.6018 REMARK 3 T TENSOR REMARK 3 T11: 0.1923 T22: 0.2187 REMARK 3 T33: 0.2625 T12: 0.0300 REMARK 3 T13: 0.0452 T23: 0.0119 REMARK 3 L TENSOR REMARK 3 L11: 5.8370 L22: 8.0447 REMARK 3 L33: 3.3225 L12: 2.3472 REMARK 3 L13: -3.1587 L23: -4.7072 REMARK 3 S TENSOR REMARK 3 S11: 0.2144 S12: 0.0913 S13: 0.1900 REMARK 3 S21: 0.0085 S22: 0.0846 S23: 0.3273 REMARK 3 S31: 0.0437 S32: -0.2121 S33: -0.3020 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 56 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.3104 45.7026 1.1704 REMARK 3 T TENSOR REMARK 3 T11: 0.3093 T22: 0.4491 REMARK 3 T33: 0.2820 T12: 0.0610 REMARK 3 T13: 0.0467 T23: 0.1529 REMARK 3 L TENSOR REMARK 3 L11: 5.3093 L22: 5.9059 REMARK 3 L33: 7.5273 L12: -2.3920 REMARK 3 L13: 6.2202 L23: -4.1072 REMARK 3 S TENSOR REMARK 3 S11: 0.2201 S12: 0.8291 S13: 0.4190 REMARK 3 S21: -0.6443 S22: -0.2005 S23: 0.1859 REMARK 3 S31: 0.1731 S32: 0.1478 S33: -0.1337 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 66 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.7245 48.6200 14.7756 REMARK 3 T TENSOR REMARK 3 T11: 0.1847 T22: 0.2537 REMARK 3 T33: 0.3053 T12: 0.0224 REMARK 3 T13: 0.0547 T23: 0.0477 REMARK 3 L TENSOR REMARK 3 L11: 5.0737 L22: 2.7690 REMARK 3 L33: 8.2811 L12: -0.8268 REMARK 3 L13: -3.3207 L23: 1.1800 REMARK 3 S TENSOR REMARK 3 S11: 0.1085 S12: 0.1334 S13: 0.5574 REMARK 3 S21: 0.0997 S22: 0.0830 S23: 0.2457 REMARK 3 S31: 0.0510 S32: 0.0079 S33: -0.2272 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 88 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.4146 55.3469 20.6669 REMARK 3 T TENSOR REMARK 3 T11: 0.2826 T22: 0.2898 REMARK 3 T33: 0.5001 T12: -0.0073 REMARK 3 T13: 0.0949 T23: -0.0690 REMARK 3 L TENSOR REMARK 3 L11: 4.1186 L22: 2.9731 REMARK 3 L33: 3.0591 L12: 0.1064 REMARK 3 L13: -2.3337 L23: 1.0359 REMARK 3 S TENSOR REMARK 3 S11: 0.2410 S12: -0.4521 S13: 1.4099 REMARK 3 S21: 0.3201 S22: 0.0322 S23: -0.0547 REMARK 3 S31: -0.3381 S32: 0.1955 S33: -0.2941 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 127 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.2401 53.8194 8.4786 REMARK 3 T TENSOR REMARK 3 T11: 0.2527 T22: 0.4095 REMARK 3 T33: 0.4082 T12: -0.0053 REMARK 3 T13: 0.0674 T23: 0.1385 REMARK 3 L TENSOR REMARK 3 L11: 3.6703 L22: 5.5378 REMARK 3 L33: 5.4645 L12: -3.2870 REMARK 3 L13: -3.5343 L23: 2.3398 REMARK 3 S TENSOR REMARK 3 S11: -0.0703 S12: 0.6504 S13: 0.7179 REMARK 3 S21: 0.1786 S22: -0.0323 S23: -0.1754 REMARK 3 S31: -0.2982 S32: 0.2726 S33: -0.1287 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 138 THROUGH 163 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.9854 49.3793 22.4714 REMARK 3 T TENSOR REMARK 3 T11: 0.2182 T22: 0.3552 REMARK 3 T33: 0.3272 T12: -0.0225 REMARK 3 T13: 0.0160 T23: -0.0408 REMARK 3 L TENSOR REMARK 3 L11: 4.7322 L22: 8.4644 REMARK 3 L33: 4.8260 L12: -1.3387 REMARK 3 L13: -0.9334 L23: 2.2461 REMARK 3 S TENSOR REMARK 3 S11: -0.1018 S12: -0.5372 S13: 0.3746 REMARK 3 S21: 0.9549 S22: -0.0286 S23: 0.0891 REMARK 3 S31: 0.2121 S32: 0.3654 S33: -0.0512 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6CPD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1000233151. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.37716 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 2.3.10 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 2.3.10 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22042 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 27.50 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 37.1600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.9 REMARK 200 DATA REDUNDANCY IN SHELL : 10.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.850 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX 1.8.3_1479 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE, 0.2 M AMMONIUM REMARK 280 SULFATE, 18% PEG 4000, PH 4.6, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.30867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 23.65433 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 23.65433 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 47.30867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 36 REMARK 465 MET A 37 REMARK 465 SER B 36 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 344 O HOH B 242 2.04 REMARK 500 NZ LYS B 59 O HOH B 201 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 317 O HOH A 350 4555 1.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 65 -95.02 -129.93 REMARK 500 CYS B 65 -93.61 -127.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 A 202 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET A 42 SD REMARK 620 2 MET A 44 SD 92.7 REMARK 620 3 MET B 42 SD 118.2 116.1 REMARK 620 4 MET B 44 SD 112.4 104.4 111.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU1 A 202 DBREF 6CPD A 36 163 PDB 6CPD 6CPD 36 163 DBREF 6CPD B 36 163 PDB 6CPD 6CPD 36 163 SEQRES 1 A 128 SER MET GLY ASN MET CYS MET VAL MET PHE GLY TYR ASP SEQRES 2 A 128 MET ILE HIS ILE THR VAL PHE GLN PRO ASP LYS SER ARG SEQRES 3 A 128 SER GLU TYR CYS ASP GLU ILE PRO ALA THR GLY ARG THR SEQRES 4 A 128 ILE MET ALA PHE ASP ILE GLU ASN PRO ALA PHE ARG ASP SEQRES 5 A 128 LEU PRO LEU GLU LEU ARG ILE ILE ARG ASP PRO LEU THR SEQRES 6 A 128 PRO VAL LEU PRO THR GLY GLU LYS GLU LEU ASP ALA LEU SEQRES 7 A 128 THR GLU LEU HIS LEU PRO ALA LYS LYS TYR SER LYS GLY SEQRES 8 A 128 THR PHE SER VAL GLU HIS ASN PHE ALA ASN ASN GLY HIS SEQRES 9 A 128 TYR ILE GLY LEU VAL THR LEU THR ARG GLU SER GLY GLN SEQRES 10 A 128 GLN GLU THR ALA GLN PHE LYS PHE MET VAL GLY SEQRES 1 B 128 SER MET GLY ASN MET CYS MET VAL MET PHE GLY TYR ASP SEQRES 2 B 128 MET ILE HIS ILE THR VAL PHE GLN PRO ASP LYS SER ARG SEQRES 3 B 128 SER GLU TYR CYS ASP GLU ILE PRO ALA THR GLY ARG THR SEQRES 4 B 128 ILE MET ALA PHE ASP ILE GLU ASN PRO ALA PHE ARG ASP SEQRES 5 B 128 LEU PRO LEU GLU LEU ARG ILE ILE ARG ASP PRO LEU THR SEQRES 6 B 128 PRO VAL LEU PRO THR GLY GLU LYS GLU LEU ASP ALA LEU SEQRES 7 B 128 THR GLU LEU HIS LEU PRO ALA LYS LYS TYR SER LYS GLY SEQRES 8 B 128 THR PHE SER VAL GLU HIS ASN PHE ALA ASN ASN GLY HIS SEQRES 9 B 128 TYR ILE GLY LEU VAL THR LEU THR ARG GLU SER GLY GLN SEQRES 10 B 128 GLN GLU THR ALA GLN PHE LYS PHE MET VAL GLY HET SO4 A 201 5 HET CU1 A 202 1 HETNAM SO4 SULFATE ION HETNAM CU1 COPPER (I) ION FORMUL 3 SO4 O4 S 2- FORMUL 4 CU1 CU 1+ FORMUL 5 HOH *126(H2 O) HELIX 1 AA1 ASN A 82 LEU A 88 5 7 HELIX 2 AA2 GLY A 106 LEU A 113 1 8 HELIX 3 AA3 ASN B 82 LEU B 88 5 7 HELIX 4 AA4 GLY B 106 LEU B 113 1 8 SHEET 1 AA1 3 MET A 42 PHE A 45 0 SHEET 2 AA1 3 ASP A 48 PHE A 55 -1 O ASP A 48 N PHE A 45 SHEET 3 AA1 3 GLU A 63 TYR A 64 -1 O TYR A 64 N VAL A 54 SHEET 1 AA2 4 MET A 42 PHE A 45 0 SHEET 2 AA2 4 ASP A 48 PHE A 55 -1 O ASP A 48 N PHE A 45 SHEET 3 AA2 4 GLY A 72 ILE A 80 -1 O ILE A 75 N PHE A 55 SHEET 4 AA2 4 THR A 127 PHE A 134 -1 O PHE A 128 N PHE A 78 SHEET 1 AA3 5 GLU A 67 ILE A 68 0 SHEET 2 AA3 5 GLN A 153 VAL A 162 1 O MET A 161 N ILE A 68 SHEET 3 AA3 5 GLY A 138 THR A 147 -1 N GLY A 142 O PHE A 158 SHEET 4 AA3 5 LEU A 90 ARG A 96 -1 N ARG A 93 O LEU A 143 SHEET 5 AA3 5 THR A 114 LYS A 121 -1 O GLU A 115 N ILE A 94 SHEET 1 AA4 3 MET B 42 PHE B 45 0 SHEET 2 AA4 3 ASP B 48 PHE B 55 -1 O ASP B 48 N PHE B 45 SHEET 3 AA4 3 GLU B 63 TYR B 64 -1 O TYR B 64 N VAL B 54 SHEET 1 AA5 4 MET B 42 PHE B 45 0 SHEET 2 AA5 4 ASP B 48 PHE B 55 -1 O ASP B 48 N PHE B 45 SHEET 3 AA5 4 GLY B 72 ILE B 80 -1 O ALA B 77 N THR B 53 SHEET 4 AA5 4 THR B 127 PHE B 134 -1 O PHE B 128 N PHE B 78 SHEET 1 AA6 5 GLU B 67 ILE B 68 0 SHEET 2 AA6 5 GLN B 153 VAL B 162 1 O MET B 161 N ILE B 68 SHEET 3 AA6 5 GLY B 138 THR B 147 -1 N GLY B 142 O PHE B 158 SHEET 4 AA6 5 LEU B 90 ARG B 96 -1 N ARG B 93 O LEU B 143 SHEET 5 AA6 5 THR B 114 LYS B 121 -1 O LEU B 118 N LEU B 92 SSBOND 1 CYS A 41 CYS A 65 1555 1555 2.06 SSBOND 2 CYS B 41 CYS B 65 1555 1555 2.06 LINK SD MET A 42 CU CU1 A 202 1555 1555 2.30 LINK SD MET A 44 CU CU1 A 202 1555 1555 2.40 LINK SD MET B 42 CU CU1 A 202 1555 1555 2.30 LINK SD MET B 44 CU CU1 A 202 1555 1555 2.28 SITE 1 AC1 6 SER A 60 SER A 62 TYR A 64 SER B 60 SITE 2 AC1 6 SER B 62 TYR B 64 SITE 1 AC2 4 MET A 42 MET A 44 MET B 42 MET B 44 CRYST1 83.255 83.255 70.963 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012011 0.006935 0.000000 0.00000 SCALE2 0.000000 0.013869 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014092 0.00000