HEADER PROTEIN BINDING 13-MAR-18 6CPK TITLE SOLUTION STRUCTURE OF SH3 DOMAIN FROM SHANK3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SH3 AND MULTIPLE ANKYRIN REPEAT DOMAINS PROTEIN 3; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SHANK3,PROLINE-RICH SYNAPSE-ASSOCIATED PROTEIN 2,PROSAP2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SHANK3, KIAA1650, PROSAP2, PSAP2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PSD, SCAFFOLD PROTEIN, POSTSYNAPTIC DENSITY, PROTEIN BINDING EXPDTA SOLUTION NMR NUMMDL 25 AUTHOR H.ISHIDA,H.J.VOGEL REVDAT 4 01-MAY-24 6CPK 1 REMARK REVDAT 3 08-JAN-20 6CPK 1 REMARK REVDAT 2 12-SEP-18 6CPK 1 JRNL REVDAT 1 15-AUG-18 6CPK 0 JRNL AUTH H.ISHIDA,A.SKOROBOGATOV,A.P.YAMNIUK,H.J.VOGEL JRNL TITL SOLUTION STRUCTURES OF THE SH3 DOMAINS FROM SHANK SCAFFOLD JRNL TITL 2 PROTEINS AND THEIR INTERACTIONS WITH CAV1.3 CALCIUM JRNL TITL 3 CHANNELS. JRNL REF FEBS LETT. V. 592 2786 2018 JRNL REFN ISSN 1873-3468 JRNL PMID 30058071 JRNL DOI 10.1002/1873-3468.13209 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6CPK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1000232987. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 100 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1 MM [U-99% 13C; U-99% 15N] REMARK 210 SHANK3 SH3, 20 MM BIS-TRIS, 100 REMARK 210 MM KCL, 90% H2O/10% D2O; 1 MM [U- REMARK 210 99% 13C; U-99% 15N] SHANK3 SH3, REMARK 210 20 MM BIS-TRIS, 100 MM KCL, 100% REMARK 210 D2O; 1 MM [U-99% 15N] SHANK3 SH3, REMARK 210 20 MM BIS-TRIS, 100 MM KCL, 90% REMARK 210 H2O/10% D2O; 1 MM SHANK3 SH3, 20 REMARK 210 MM BIS-TRIS, 100 MM KCL, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D CBCA(CO)NH; REMARK 210 3D HNCACB; 3D HNCO; 3D HN(CA)CO; REMARK 210 3D C(CO)NH; 3D H(CCO)NH; 3D REMARK 210 HBHA(CO)NH; 3D 1H-13C NOESY; 3D REMARK 210 1H-15N NOESY; 2D NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, NMRVIEW REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 25 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 2 ARG A 474 97.62 -60.73 REMARK 500 2 VAL A 528 105.39 -45.82 REMARK 500 3 PRO A 472 80.62 -69.80 REMARK 500 3 ARG A 474 95.41 -64.86 REMARK 500 4 VAL A 528 106.11 -45.18 REMARK 500 5 PRO A 472 78.78 -69.77 REMARK 500 5 ARG A 474 98.66 -62.78 REMARK 500 6 ARG A 474 102.14 -54.74 REMARK 500 7 PRO A 472 82.89 -69.68 REMARK 500 9 VAL A 528 104.23 -46.71 REMARK 500 10 PRO A 472 90.12 -69.79 REMARK 500 12 PRO A 472 77.48 -69.77 REMARK 500 12 VAL A 528 104.74 -45.92 REMARK 500 14 PRO A 472 75.56 -69.72 REMARK 500 14 HIS A 482 111.91 -167.26 REMARK 500 15 VAL A 528 104.38 -47.35 REMARK 500 17 GLN A 529 -75.61 -101.22 REMARK 500 19 PRO A 472 88.24 -69.80 REMARK 500 19 HIS A 482 113.23 -167.18 REMARK 500 20 HIS A 482 113.73 -167.84 REMARK 500 22 PRO A 472 78.62 -69.67 REMARK 500 22 VAL A 528 103.85 -47.63 REMARK 500 23 VAL A 528 104.77 -46.15 REMARK 500 24 ARG A 474 107.77 -52.21 REMARK 500 24 HIS A 482 114.29 -168.39 REMARK 500 25 PRO A 472 79.52 -69.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30438 RELATED DB: BMRB REMARK 900 SOLUTION STRUCTURE OF SH3 DOMAIN FROM SHANK3 DBREF 6CPK A 471 530 UNP Q9BYB0 SHAN3_HUMAN 352 411 SEQADV 6CPK MET A 470 UNP Q9BYB0 INITIATING METHIONINE SEQRES 1 A 61 MET VAL PRO GLY ARG LYS PHE ILE ALA VAL LYS ALA HIS SEQRES 2 A 61 SER PRO GLN GLY GLU GLY GLU ILE PRO LEU HIS ARG GLY SEQRES 3 A 61 GLU ALA VAL LYS VAL LEU SER ILE GLY GLU GLY GLY PHE SEQRES 4 A 61 TRP GLU GLY THR VAL LYS GLY ARG THR GLY TRP PHE PRO SEQRES 5 A 61 ALA ASP CYS VAL GLU GLU VAL GLN MET SHEET 1 AA1 5 ARG A 516 PRO A 521 0 SHEET 2 AA1 5 PHE A 508 VAL A 513 -1 N GLY A 511 O GLY A 518 SHEET 3 AA1 5 ALA A 497 ILE A 503 -1 N SER A 502 O GLU A 510 SHEET 4 AA1 5 PHE A 476 ALA A 478 -1 N PHE A 476 O VAL A 498 SHEET 5 AA1 5 VAL A 525 GLU A 527 -1 O GLU A 526 N ILE A 477 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1