data_6CPZ # _entry.id 6CPZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6CPZ pdb_00006cpz 10.2210/pdb6cpz/pdb WWPDB D_1000233194 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB GB1-L5Sem 6CNE unspecified PDB GB1-V29Sem 6C9O unspecified PDB GB1-A34Sem 6CHE unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6CPZ _pdbx_database_status.recvd_initial_deposition_date 2018-03-14 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Chen, Q.' 1 ? 'Rozovsky, S.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Phys.Chem.B _citation.journal_id_ASTM JPCBFK _citation.journal_id_CSD 1278 _citation.journal_id_ISSN 1089-5647 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 124 _citation.language ? _citation.page_first 601 _citation.page_last 616 _citation.title '77Se NMR Probes the Protein Environment of Selenomethionine.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.jpcb.9b07466 _citation.pdbx_database_id_PubMed 31846581 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chen, Q.' 1 ? primary 'Xu, S.' 2 ? primary 'Lu, X.' 3 ? primary 'Boeri, M.V.' 4 0000-0001-5374-2380 primary 'Pepelyayeva, Y.' 5 ? primary 'Diaz, E.L.' 6 ? primary 'Soni, S.D.' 7 ? primary 'Allaire, M.' 8 ? primary 'Forstner, M.B.' 9 ? primary 'Bahnson, B.J.' 10 ? primary 'Rozovsky, S.' 11 0000-0003-4902-0777 # _cell.entry_id 6CPZ _cell.length_a 27.890 _cell.length_b 36.489 _cell.length_c 48.940 _cell.angle_alpha 90.00 _cell.angle_beta 98.67 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CPZ _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Immunoglobulin G-binding protein G' 6219.598 2 ? I6Sem ? ? 2 non-polymer syn '(4R)-2-METHYLPENTANE-2,4-DIOL' 118.174 2 ? ? ? ? 3 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 2 ? ? ? ? 4 non-polymer syn 'PHOSPHATE ION' 94.971 4 ? ? ? ? 5 water nat water 18.015 179 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'IgG-binding protein G' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'GQYKL(MSE)LNGKTLKGETTTEAVDAATAEKVFKQYANDNGVDGEWTYDDATKTFTVTE' _entity_poly.pdbx_seq_one_letter_code_can GQYKLMLNGKTLKGETTTEAVDAATAEKVFKQYANDNGVDGEWTYDDATKTFTVTE _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLN n 1 3 TYR n 1 4 LYS n 1 5 LEU n 1 6 MSE n 1 7 LEU n 1 8 ASN n 1 9 GLY n 1 10 LYS n 1 11 THR n 1 12 LEU n 1 13 LYS n 1 14 GLY n 1 15 GLU n 1 16 THR n 1 17 THR n 1 18 THR n 1 19 GLU n 1 20 ALA n 1 21 VAL n 1 22 ASP n 1 23 ALA n 1 24 ALA n 1 25 THR n 1 26 ALA n 1 27 GLU n 1 28 LYS n 1 29 VAL n 1 30 PHE n 1 31 LYS n 1 32 GLN n 1 33 TYR n 1 34 ALA n 1 35 ASN n 1 36 ASP n 1 37 ASN n 1 38 GLY n 1 39 VAL n 1 40 ASP n 1 41 GLY n 1 42 GLU n 1 43 TRP n 1 44 THR n 1 45 TYR n 1 46 ASP n 1 47 ASP n 1 48 ALA n 1 49 THR n 1 50 LYS n 1 51 THR n 1 52 PHE n 1 53 THR n 1 54 VAL n 1 55 THR n 1 56 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 56 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene spg _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptococcus sp. group G' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1320 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line 'BL21(DE3)' _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SPG2_STRSG _struct_ref.pdbx_db_accession P19909 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code YKLILNGKTLKGETTTEAVDAATAEKVFKQYANDNGVDGEWTYDDATKTFTVTE _struct_ref.pdbx_align_begin 304 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6CPZ A 3 ? 56 ? P19909 304 ? 357 ? 3 56 2 1 6CPZ B 3 ? 56 ? P19909 304 ? 357 ? 3 56 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6CPZ GLY A 1 ? UNP P19909 ? ? 'expression tag' 1 1 1 6CPZ GLN A 2 ? UNP P19909 ? ? 'expression tag' 2 2 1 6CPZ MSE A 6 ? UNP P19909 ILE 307 'engineered mutation' 6 3 2 6CPZ GLY B 1 ? UNP P19909 ? ? 'expression tag' 1 4 2 6CPZ GLN B 2 ? UNP P19909 ? ? 'expression tag' 2 5 2 6CPZ MSE B 6 ? UNP P19909 ILE 307 'engineered mutation' 6 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174 MRD non-polymer . '(4R)-2-METHYLPENTANE-2,4-DIOL' ? 'C6 H14 O2' 118.174 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6CPZ _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.99 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 38.32 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.7 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 283.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;48% MPD 20% IPA 25 mM sodium acetate buffer pH 4.7 20 mg/ml protein in 25 mM sodium acetate buffer pH 5.5 and 2 mM TCEP ; _exptl_crystal_grow.pdbx_pH_range 4.5-4.9 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-08-17 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Asymetric curved crystal' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 5.0.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9795 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 5.0.1 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate 7.95 _reflns.entry_id 6CPZ _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.12 _reflns.d_resolution_low 27.571 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 69779 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 97.43 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 2.0 _reflns.pdbx_Rmerge_I_obs 0.01784 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.98 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.02524 _reflns.pdbx_Rpim_I_all 0.01784 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.12 _reflns_shell.d_res_low 1.16 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 6CPZ _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 69779 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27.571 _refine.ls_d_res_high 1.120 _refine.ls_percent_reflns_obs 95.06 _refine.ls_R_factor_obs 0.1379 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1369 _refine.ls_R_factor_R_free 0.1561 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.45 _refine.ls_number_reflns_R_free 3802 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model 2QMT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.07 _refine.pdbx_overall_phase_error 18.10 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 868 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 52 _refine_hist.number_atoms_solvent 179 _refine_hist.number_atoms_total 1099 _refine_hist.d_res_high 1.120 _refine_hist.d_res_low 27.571 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.008 ? ? 970 'X-RAY DIFFRACTION' ? f_angle_d 1.081 ? ? 1327 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 20.938 ? ? 349 'X-RAY DIFFRACTION' ? f_chiral_restr 0.086 ? ? 150 'X-RAY DIFFRACTION' ? f_plane_restr 0.006 ? ? 161 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 1.1200 1.1342 2320 0.1268 91.00 0.1617 . . 134 . . . . 'X-RAY DIFFRACTION' . 1.1342 1.1491 2431 0.1180 92.00 0.1611 . . 142 . . . . 'X-RAY DIFFRACTION' . 1.1491 1.1649 2349 0.1225 92.00 0.1470 . . 139 . . . . 'X-RAY DIFFRACTION' . 1.1649 1.1815 2340 0.1205 92.00 0.1377 . . 132 . . . . 'X-RAY DIFFRACTION' . 1.1815 1.1992 2378 0.1295 92.00 0.1580 . . 134 . . . . 'X-RAY DIFFRACTION' . 1.1992 1.2179 2391 0.1266 92.00 0.1688 . . 139 . . . . 'X-RAY DIFFRACTION' . 1.2179 1.2379 2352 0.1176 94.00 0.1834 . . 133 . . . . 'X-RAY DIFFRACTION' . 1.2379 1.2592 2431 0.1172 93.00 0.1515 . . 137 . . . . 'X-RAY DIFFRACTION' . 1.2592 1.2821 2422 0.1198 95.00 0.1517 . . 138 . . . . 'X-RAY DIFFRACTION' . 1.2821 1.3068 2427 0.1110 94.00 0.1435 . . 145 . . . . 'X-RAY DIFFRACTION' . 1.3068 1.3334 2431 0.1145 94.00 0.1305 . . 140 . . . . 'X-RAY DIFFRACTION' . 1.3334 1.3624 2391 0.1219 93.00 0.1514 . . 138 . . . . 'X-RAY DIFFRACTION' . 1.3624 1.3941 2478 0.1163 94.00 0.1680 . . 143 . . . . 'X-RAY DIFFRACTION' . 1.3941 1.4290 2360 0.1180 94.00 0.1265 . . 132 . . . . 'X-RAY DIFFRACTION' . 1.4290 1.4676 2465 0.1143 95.00 0.1727 . . 143 . . . . 'X-RAY DIFFRACTION' . 1.4676 1.5108 2409 0.1121 96.00 0.1471 . . 140 . . . . 'X-RAY DIFFRACTION' . 1.5108 1.5596 2511 0.1082 96.00 0.1338 . . 137 . . . . 'X-RAY DIFFRACTION' . 1.5596 1.6153 2447 0.1142 96.00 0.1551 . . 140 . . . . 'X-RAY DIFFRACTION' . 1.6153 1.6800 2474 0.1232 96.00 0.1566 . . 148 . . . . 'X-RAY DIFFRACTION' . 1.6800 1.7564 2537 0.1348 97.00 0.1536 . . 145 . . . . 'X-RAY DIFFRACTION' . 1.7564 1.8490 2512 0.1391 98.00 0.1905 . . 145 . . . . 'X-RAY DIFFRACTION' . 1.8490 1.9648 2486 0.1330 98.00 0.1378 . . 145 . . . . 'X-RAY DIFFRACTION' . 1.9648 2.1165 2523 0.1301 98.00 0.1243 . . 143 . . . . 'X-RAY DIFFRACTION' . 2.1165 2.3294 2514 0.1446 98.00 0.1311 . . 146 . . . . 'X-RAY DIFFRACTION' . 2.3294 2.6662 2532 0.1582 99.00 0.1780 . . 153 . . . . 'X-RAY DIFFRACTION' . 2.6662 3.3582 2548 0.1613 99.00 0.1663 . . 147 . . . . 'X-RAY DIFFRACTION' . 3.3582 27.5791 2518 0.1620 98.00 0.1803 . . 144 . . . . # _struct.entry_id 6CPZ _struct.title 'Selenomethionine mutant (I6Sem) of protein GB1 examined by X-ray diffraction' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6CPZ _struct_keywords.text 'Immunoglobulin G-binding protein domain B1, IMMUNE SYSTEM' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 2 ? H N N 3 ? I N N 4 ? J N N 4 ? K N N 5 ? L N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 22 ? ASN A 37 ? ASP A 22 ASN A 37 1 ? 16 HELX_P HELX_P2 AA2 ASP B 22 ? ASN B 37 ? ASP B 22 ASN B 37 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A LEU 5 C ? ? ? 1_555 A MSE 6 N ? ? A LEU 5 A MSE 6 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale2 covale both ? A MSE 6 C ? ? ? 1_555 A LEU 7 N ? ? A MSE 6 A LEU 7 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale3 covale both ? B LEU 5 C ? ? ? 1_555 B MSE 6 N ? ? B LEU 5 B MSE 6 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale4 covale both ? B MSE 6 C ? ? ? 1_555 B LEU 7 N ? ? B MSE 6 B LEU 7 1_555 ? ? ? ? ? ? ? 1.317 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel AA2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LYS A 13 ? GLU A 19 ? LYS A 13 GLU A 19 AA1 2 GLN A 2 ? ASN A 8 ? GLN A 2 ASN A 8 AA1 3 THR A 51 ? THR A 55 ? THR A 51 THR A 55 AA1 4 GLU A 42 ? ASP A 46 ? GLU A 42 ASP A 46 AA2 1 LYS B 13 ? GLU B 19 ? LYS B 13 GLU B 19 AA2 2 GLN B 2 ? ASN B 8 ? GLN B 2 ASN B 8 AA2 3 THR B 51 ? THR B 55 ? THR B 51 THR B 55 AA2 4 GLU B 42 ? ASP B 46 ? GLU B 42 ASP B 46 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O THR A 18 ? O THR A 18 N TYR A 3 ? N TYR A 3 AA1 2 3 N LYS A 4 ? N LYS A 4 O PHE A 52 ? O PHE A 52 AA1 3 4 O THR A 55 ? O THR A 55 N GLU A 42 ? N GLU A 42 AA2 1 2 O THR B 18 ? O THR B 18 N TYR B 3 ? N TYR B 3 AA2 2 3 N LYS B 4 ? N LYS B 4 O PHE B 52 ? O PHE B 52 AA2 3 4 O THR B 55 ? O THR B 55 N GLU B 42 ? N GLU B 42 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MRD 101 ? 5 'binding site for residue MRD A 101' AC2 Software A MPD 102 ? 3 'binding site for residue MPD A 102' AC3 Software A PO4 103 ? 2 'binding site for residue PO4 A 103' AC4 Software A PO4 104 ? 4 'binding site for residue PO4 A 104' AC5 Software B MRD 101 ? 5 'binding site for residue MRD B 101' AC6 Software B MPD 102 ? 4 'binding site for residue MPD B 102' AC7 Software B PO4 103 ? 2 'binding site for residue PO4 B 103' AC8 Software B PO4 104 ? 5 'binding site for residue PO4 B 104' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASN A 8 ? ASN A 8 . ? 1_555 ? 2 AC1 5 THR A 53 ? THR A 53 . ? 1_555 ? 3 AC1 5 THR A 55 ? THR A 55 . ? 1_555 ? 4 AC1 5 HOH K . ? HOH A 212 . ? 1_655 ? 5 AC1 5 HOH K . ? HOH A 229 . ? 1_655 ? 6 AC2 3 LYS A 10 ? LYS A 10 . ? 1_455 ? 7 AC2 3 THR A 11 ? THR A 11 . ? 1_455 ? 8 AC2 3 LYS A 13 ? LYS A 13 . ? 1_455 ? 9 AC3 2 ALA A 24 ? ALA A 24 . ? 1_555 ? 10 AC3 2 GLU A 27 ? GLU A 27 . ? 1_555 ? 11 AC4 4 GLU A 27 ? GLU A 27 . ? 1_555 ? 12 AC4 4 LYS A 31 ? LYS A 31 . ? 1_555 ? 13 AC4 4 TRP A 43 ? TRP A 43 . ? 1_555 ? 14 AC4 4 HOH K . ? HOH A 266 . ? 1_555 ? 15 AC5 5 ASN B 8 ? ASN B 8 . ? 1_555 ? 16 AC5 5 THR B 53 ? THR B 53 . ? 1_555 ? 17 AC5 5 THR B 55 ? THR B 55 . ? 1_555 ? 18 AC5 5 HOH L . ? HOH B 215 . ? 1_655 ? 19 AC5 5 HOH L . ? HOH B 224 . ? 1_655 ? 20 AC6 4 THR B 11 ? THR B 11 . ? 1_555 ? 21 AC6 4 LYS B 13 ? LYS B 13 . ? 1_555 ? 22 AC6 4 PO4 I . ? PO4 B 103 . ? 1_655 ? 23 AC6 4 HOH L . ? HOH B 223 . ? 1_555 ? 24 AC7 2 MPD H . ? MPD B 102 . ? 1_455 ? 25 AC7 2 HOH L . ? HOH B 223 . ? 1_455 ? 26 AC8 5 GLU B 27 ? GLU B 27 . ? 1_555 ? 27 AC8 5 LYS B 31 ? LYS B 31 . ? 1_555 ? 28 AC8 5 TRP B 43 ? TRP B 43 . ? 1_555 ? 29 AC8 5 HOH L . ? HOH B 210 . ? 1_555 ? 30 AC8 5 HOH L . ? HOH B 253 . ? 1_555 ? # _atom_sites.entry_id 6CPZ _atom_sites.fract_transf_matrix[1][1] 0.035855 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005467 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.027406 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020669 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 TYR 3 3 3 TYR TYR A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 MSE 6 6 6 MSE MSE A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 ASN 8 8 8 ASN ASN A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 THR 17 17 17 THR THR A . n A 1 18 THR 18 18 18 THR THR A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 VAL 21 21 21 VAL VAL A . n A 1 22 ASP 22 22 22 ASP ASP A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 THR 25 25 25 THR THR A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 PHE 30 30 30 PHE PHE A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 GLN 32 32 32 GLN GLN A . n A 1 33 TYR 33 33 33 TYR TYR A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 ASN 35 35 35 ASN ASN A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 GLU 42 42 42 GLU GLU A . n A 1 43 TRP 43 43 43 TRP TRP A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 TYR 45 45 45 TYR TYR A . n A 1 46 ASP 46 46 46 ASP ASP A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 ALA 48 48 48 ALA ALA A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 LYS 50 50 50 LYS LYS A . n A 1 51 THR 51 51 51 THR THR A . n A 1 52 PHE 52 52 52 PHE PHE A . n A 1 53 THR 53 53 53 THR THR A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 GLU 56 56 56 GLU GLU A . n B 1 1 GLY 1 1 1 GLY GLY B . n B 1 2 GLN 2 2 2 GLN GLN B . n B 1 3 TYR 3 3 3 TYR TYR B . n B 1 4 LYS 4 4 4 LYS LYS B . n B 1 5 LEU 5 5 5 LEU LEU B . n B 1 6 MSE 6 6 6 MSE MSE B . n B 1 7 LEU 7 7 7 LEU LEU B . n B 1 8 ASN 8 8 8 ASN ASN B . n B 1 9 GLY 9 9 9 GLY GLY B . n B 1 10 LYS 10 10 10 LYS LYS B . n B 1 11 THR 11 11 11 THR THR B . n B 1 12 LEU 12 12 12 LEU LEU B . n B 1 13 LYS 13 13 13 LYS LYS B . n B 1 14 GLY 14 14 14 GLY GLY B . n B 1 15 GLU 15 15 15 GLU GLU B . n B 1 16 THR 16 16 16 THR THR B . n B 1 17 THR 17 17 17 THR THR B . n B 1 18 THR 18 18 18 THR THR B . n B 1 19 GLU 19 19 19 GLU GLU B . n B 1 20 ALA 20 20 20 ALA ALA B . n B 1 21 VAL 21 21 21 VAL VAL B . n B 1 22 ASP 22 22 22 ASP ASP B . n B 1 23 ALA 23 23 23 ALA ALA B . n B 1 24 ALA 24 24 24 ALA ALA B . n B 1 25 THR 25 25 25 THR THR B . n B 1 26 ALA 26 26 26 ALA ALA B . n B 1 27 GLU 27 27 27 GLU GLU B . n B 1 28 LYS 28 28 28 LYS LYS B . n B 1 29 VAL 29 29 29 VAL VAL B . n B 1 30 PHE 30 30 30 PHE PHE B . n B 1 31 LYS 31 31 31 LYS LYS B . n B 1 32 GLN 32 32 32 GLN GLN B . n B 1 33 TYR 33 33 33 TYR TYR B . n B 1 34 ALA 34 34 34 ALA ALA B . n B 1 35 ASN 35 35 35 ASN ASN B . n B 1 36 ASP 36 36 36 ASP ASP B . n B 1 37 ASN 37 37 37 ASN ASN B . n B 1 38 GLY 38 38 38 GLY GLY B . n B 1 39 VAL 39 39 39 VAL VAL B . n B 1 40 ASP 40 40 40 ASP ASP B . n B 1 41 GLY 41 41 41 GLY GLY B . n B 1 42 GLU 42 42 42 GLU GLU B . n B 1 43 TRP 43 43 43 TRP TRP B . n B 1 44 THR 44 44 44 THR THR B . n B 1 45 TYR 45 45 45 TYR TYR B . n B 1 46 ASP 46 46 46 ASP ASP B . n B 1 47 ASP 47 47 47 ASP ASP B . n B 1 48 ALA 48 48 48 ALA ALA B . n B 1 49 THR 49 49 49 THR THR B . n B 1 50 LYS 50 50 50 LYS LYS B . n B 1 51 THR 51 51 51 THR THR B . n B 1 52 PHE 52 52 52 PHE PHE B . n B 1 53 THR 53 53 53 THR THR B . n B 1 54 VAL 54 54 54 VAL VAL B . n B 1 55 THR 55 55 55 THR THR B . n B 1 56 GLU 56 56 56 GLU GLU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MRD 1 101 1 MRD MPD A . D 3 MPD 1 102 6 MPD MPD A . E 4 PO4 1 103 2 PO4 PO4 A . F 4 PO4 1 104 4 PO4 PO4 A . G 2 MRD 1 101 2 MRD MPD B . H 3 MPD 1 102 3 MPD MPD B . I 4 PO4 1 103 3 PO4 PO4 B . J 4 PO4 1 104 5 PO4 PO4 B . K 5 HOH 1 201 127 HOH HOH A . K 5 HOH 2 202 66 HOH HOH A . K 5 HOH 3 203 134 HOH HOH A . K 5 HOH 4 204 89 HOH HOH A . K 5 HOH 5 205 48 HOH HOH A . K 5 HOH 6 206 79 HOH HOH A . K 5 HOH 7 207 112 HOH HOH A . K 5 HOH 8 208 29 HOH HOH A . K 5 HOH 9 209 71 HOH HOH A . K 5 HOH 10 210 163 HOH HOH A . K 5 HOH 11 211 170 HOH HOH A . K 5 HOH 12 212 78 HOH HOH A . K 5 HOH 13 213 154 HOH HOH A . K 5 HOH 14 214 34 HOH HOH A . K 5 HOH 15 215 95 HOH HOH A . K 5 HOH 16 216 124 HOH HOH A . K 5 HOH 17 217 43 HOH HOH A . K 5 HOH 18 218 113 HOH HOH A . K 5 HOH 19 219 166 HOH HOH A . K 5 HOH 20 220 52 HOH HOH A . K 5 HOH 21 221 120 HOH HOH A . K 5 HOH 22 222 33 HOH HOH A . K 5 HOH 23 223 133 HOH HOH A . K 5 HOH 24 224 31 HOH HOH A . K 5 HOH 25 225 171 HOH HOH A . K 5 HOH 26 226 10 HOH HOH A . K 5 HOH 27 227 6 HOH HOH A . K 5 HOH 28 228 93 HOH HOH A . K 5 HOH 29 229 5 HOH HOH A . K 5 HOH 30 230 12 HOH HOH A . K 5 HOH 31 231 143 HOH HOH A . K 5 HOH 32 232 162 HOH HOH A . K 5 HOH 33 233 47 HOH HOH A . K 5 HOH 34 234 173 HOH HOH A . K 5 HOH 35 235 62 HOH HOH A . K 5 HOH 36 236 144 HOH HOH A . K 5 HOH 37 237 3 HOH HOH A . K 5 HOH 38 238 11 HOH HOH A . K 5 HOH 39 239 130 HOH HOH A . K 5 HOH 40 240 126 HOH HOH A . K 5 HOH 41 241 82 HOH HOH A . K 5 HOH 42 242 8 HOH HOH A . K 5 HOH 43 243 107 HOH HOH A . K 5 HOH 44 244 137 HOH HOH A . K 5 HOH 45 245 20 HOH HOH A . K 5 HOH 46 246 53 HOH HOH A . K 5 HOH 47 247 92 HOH HOH A . K 5 HOH 48 248 179 HOH HOH A . K 5 HOH 49 249 26 HOH HOH A . K 5 HOH 50 250 167 HOH HOH A . K 5 HOH 51 251 165 HOH HOH A . K 5 HOH 52 252 148 HOH HOH A . K 5 HOH 53 253 149 HOH HOH A . K 5 HOH 54 254 57 HOH HOH A . K 5 HOH 55 255 67 HOH HOH A . K 5 HOH 56 256 15 HOH HOH A . K 5 HOH 57 257 86 HOH HOH A . K 5 HOH 58 258 42 HOH HOH A . K 5 HOH 59 259 80 HOH HOH A . K 5 HOH 60 260 21 HOH HOH A . K 5 HOH 61 261 17 HOH HOH A . K 5 HOH 62 262 103 HOH HOH A . K 5 HOH 63 263 73 HOH HOH A . K 5 HOH 64 264 32 HOH HOH A . K 5 HOH 65 265 24 HOH HOH A . K 5 HOH 66 266 123 HOH HOH A . K 5 HOH 67 267 121 HOH HOH A . K 5 HOH 68 268 109 HOH HOH A . K 5 HOH 69 269 136 HOH HOH A . K 5 HOH 70 270 161 HOH HOH A . K 5 HOH 71 271 146 HOH HOH A . K 5 HOH 72 272 118 HOH HOH A . K 5 HOH 73 273 97 HOH HOH A . K 5 HOH 74 274 63 HOH HOH A . K 5 HOH 75 275 174 HOH HOH A . K 5 HOH 76 276 139 HOH HOH A . K 5 HOH 77 277 151 HOH HOH A . K 5 HOH 78 278 141 HOH HOH A . K 5 HOH 79 279 102 HOH HOH A . K 5 HOH 80 280 105 HOH HOH A . K 5 HOH 81 281 76 HOH HOH A . K 5 HOH 82 282 75 HOH HOH A . K 5 HOH 83 283 54 HOH HOH A . K 5 HOH 84 284 140 HOH HOH A . K 5 HOH 85 285 60 HOH HOH A . K 5 HOH 86 286 156 HOH HOH A . K 5 HOH 87 287 132 HOH HOH A . K 5 HOH 88 288 81 HOH HOH A . K 5 HOH 89 289 108 HOH HOH A . K 5 HOH 90 290 64 HOH HOH A . K 5 HOH 91 291 94 HOH HOH A . K 5 HOH 92 292 110 HOH HOH A . K 5 HOH 93 293 150 HOH HOH A . K 5 HOH 94 294 175 HOH HOH A . K 5 HOH 95 295 106 HOH HOH A . L 5 HOH 1 201 122 HOH HOH B . L 5 HOH 2 202 168 HOH HOH B . L 5 HOH 3 203 90 HOH HOH B . L 5 HOH 4 204 56 HOH HOH B . L 5 HOH 5 205 157 HOH HOH B . L 5 HOH 6 206 128 HOH HOH B . L 5 HOH 7 207 129 HOH HOH B . L 5 HOH 8 208 135 HOH HOH B . L 5 HOH 9 209 35 HOH HOH B . L 5 HOH 10 210 169 HOH HOH B . L 5 HOH 11 211 27 HOH HOH B . L 5 HOH 12 212 37 HOH HOH B . L 5 HOH 13 213 88 HOH HOH B . L 5 HOH 14 214 119 HOH HOH B . L 5 HOH 15 215 38 HOH HOH B . L 5 HOH 16 216 51 HOH HOH B . L 5 HOH 17 217 84 HOH HOH B . L 5 HOH 18 218 28 HOH HOH B . L 5 HOH 19 219 176 HOH HOH B . L 5 HOH 20 220 72 HOH HOH B . L 5 HOH 21 221 91 HOH HOH B . L 5 HOH 22 222 100 HOH HOH B . L 5 HOH 23 223 125 HOH HOH B . L 5 HOH 24 224 1 HOH HOH B . L 5 HOH 25 225 7 HOH HOH B . L 5 HOH 26 226 87 HOH HOH B . L 5 HOH 27 227 23 HOH HOH B . L 5 HOH 28 228 44 HOH HOH B . L 5 HOH 29 229 9 HOH HOH B . L 5 HOH 30 230 158 HOH HOH B . L 5 HOH 31 231 4 HOH HOH B . L 5 HOH 32 232 39 HOH HOH B . L 5 HOH 33 233 41 HOH HOH B . L 5 HOH 34 234 45 HOH HOH B . L 5 HOH 35 235 164 HOH HOH B . L 5 HOH 36 236 30 HOH HOH B . L 5 HOH 37 237 22 HOH HOH B . L 5 HOH 38 238 13 HOH HOH B . L 5 HOH 39 239 99 HOH HOH B . L 5 HOH 40 240 147 HOH HOH B . L 5 HOH 41 241 58 HOH HOH B . L 5 HOH 42 242 74 HOH HOH B . L 5 HOH 43 243 70 HOH HOH B . L 5 HOH 44 244 59 HOH HOH B . L 5 HOH 45 245 116 HOH HOH B . L 5 HOH 46 246 85 HOH HOH B . L 5 HOH 47 247 46 HOH HOH B . L 5 HOH 48 248 2 HOH HOH B . L 5 HOH 49 249 115 HOH HOH B . L 5 HOH 50 250 142 HOH HOH B . L 5 HOH 51 251 14 HOH HOH B . L 5 HOH 52 252 36 HOH HOH B . L 5 HOH 53 253 61 HOH HOH B . L 5 HOH 54 254 18 HOH HOH B . L 5 HOH 55 255 19 HOH HOH B . L 5 HOH 56 256 153 HOH HOH B . L 5 HOH 57 257 16 HOH HOH B . L 5 HOH 58 258 98 HOH HOH B . L 5 HOH 59 259 160 HOH HOH B . L 5 HOH 60 260 65 HOH HOH B . L 5 HOH 61 261 104 HOH HOH B . L 5 HOH 62 262 138 HOH HOH B . L 5 HOH 63 263 131 HOH HOH B . L 5 HOH 64 264 83 HOH HOH B . L 5 HOH 65 265 152 HOH HOH B . L 5 HOH 66 266 145 HOH HOH B . L 5 HOH 67 267 55 HOH HOH B . L 5 HOH 68 268 40 HOH HOH B . L 5 HOH 69 269 77 HOH HOH B . L 5 HOH 70 270 101 HOH HOH B . L 5 HOH 71 271 111 HOH HOH B . L 5 HOH 72 272 114 HOH HOH B . L 5 HOH 73 273 117 HOH HOH B . L 5 HOH 74 274 155 HOH HOH B . L 5 HOH 75 275 49 HOH HOH B . L 5 HOH 76 276 177 HOH HOH B . L 5 HOH 77 277 68 HOH HOH B . L 5 HOH 78 278 172 HOH HOH B . L 5 HOH 79 279 25 HOH HOH B . L 5 HOH 80 280 159 HOH HOH B . L 5 HOH 81 281 69 HOH HOH B . L 5 HOH 82 282 50 HOH HOH B . L 5 HOH 83 283 96 HOH HOH B . L 5 HOH 84 284 178 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F,K 2 1 B,G,H,I,J,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-07-10 2 'Structure model' 1 1 2019-11-27 3 'Structure model' 1 2 2020-07-22 4 'Structure model' 1 3 2023-10-04 5 'Structure model' 1 4 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Author supporting evidence' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_audit_support 2 3 'Structure model' citation 3 3 'Structure model' citation_author 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' database_2 7 4 'Structure model' pdbx_initial_refinement_model 8 5 'Structure model' chem_comp_atom 9 5 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_audit_support.funding_organization' 2 3 'Structure model' '_citation.country' 3 3 'Structure model' '_citation.journal_abbrev' 4 3 'Structure model' '_citation.journal_id_ASTM' 5 3 'Structure model' '_citation.journal_id_CSD' 6 3 'Structure model' '_citation.journal_id_ISSN' 7 3 'Structure model' '_citation.journal_volume' 8 3 'Structure model' '_citation.page_first' 9 3 'Structure model' '_citation.page_last' 10 3 'Structure model' '_citation.pdbx_database_id_DOI' 11 3 'Structure model' '_citation.pdbx_database_id_PubMed' 12 3 'Structure model' '_citation.title' 13 3 'Structure model' '_citation.year' 14 4 'Structure model' '_database_2.pdbx_DOI' 15 4 'Structure model' '_database_2.pdbx_database_accession' 16 5 'Structure model' '_chem_comp_atom.atom_id' 17 5 'Structure model' '_chem_comp_bond.atom_id_2' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.13_2998: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HZ3 A LYS 10 ? A O A HOH 201 ? ? 1.57 2 1 O A HOH 244 ? ? O A HOH 269 ? ? 1.85 3 1 O B HOH 202 ? ? O B HOH 235 ? ? 2.00 4 1 OD2 B ASP 40 ? ? O B HOH 201 ? ? 2.08 5 1 O A HOH 203 ? ? O A HOH 253 ? ? 2.09 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O B HOH 266 ? ? 1_555 O B HOH 280 ? ? 1_455 1.85 2 1 O A HOH 276 ? ? 1_555 O B HOH 262 ? ? 1_455 2.08 3 1 O A HOH 203 ? ? 1_555 O A HOH 269 ? ? 2_356 2.19 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ASN N N N N 14 ASN CA C N S 15 ASN C C N N 16 ASN O O N N 17 ASN CB C N N 18 ASN CG C N N 19 ASN OD1 O N N 20 ASN ND2 N N N 21 ASN OXT O N N 22 ASN H H N N 23 ASN H2 H N N 24 ASN HA H N N 25 ASN HB2 H N N 26 ASN HB3 H N N 27 ASN HD21 H N N 28 ASN HD22 H N N 29 ASN HXT H N N 30 ASP N N N N 31 ASP CA C N S 32 ASP C C N N 33 ASP O O N N 34 ASP CB C N N 35 ASP CG C N N 36 ASP OD1 O N N 37 ASP OD2 O N N 38 ASP OXT O N N 39 ASP H H N N 40 ASP H2 H N N 41 ASP HA H N N 42 ASP HB2 H N N 43 ASP HB3 H N N 44 ASP HD2 H N N 45 ASP HXT H N N 46 GLN N N N N 47 GLN CA C N S 48 GLN C C N N 49 GLN O O N N 50 GLN CB C N N 51 GLN CG C N N 52 GLN CD C N N 53 GLN OE1 O N N 54 GLN NE2 N N N 55 GLN OXT O N N 56 GLN H H N N 57 GLN H2 H N N 58 GLN HA H N N 59 GLN HB2 H N N 60 GLN HB3 H N N 61 GLN HG2 H N N 62 GLN HG3 H N N 63 GLN HE21 H N N 64 GLN HE22 H N N 65 GLN HXT H N N 66 GLU N N N N 67 GLU CA C N S 68 GLU C C N N 69 GLU O O N N 70 GLU CB C N N 71 GLU CG C N N 72 GLU CD C N N 73 GLU OE1 O N N 74 GLU OE2 O N N 75 GLU OXT O N N 76 GLU H H N N 77 GLU H2 H N N 78 GLU HA H N N 79 GLU HB2 H N N 80 GLU HB3 H N N 81 GLU HG2 H N N 82 GLU HG3 H N N 83 GLU HE2 H N N 84 GLU HXT H N N 85 GLY N N N N 86 GLY CA C N N 87 GLY C C N N 88 GLY O O N N 89 GLY OXT O N N 90 GLY H H N N 91 GLY H2 H N N 92 GLY HA2 H N N 93 GLY HA3 H N N 94 GLY HXT H N N 95 HOH O O N N 96 HOH H1 H N N 97 HOH H2 H N N 98 ILE N N N N 99 ILE CA C N S 100 ILE C C N N 101 ILE O O N N 102 ILE CB C N S 103 ILE CG1 C N N 104 ILE CG2 C N N 105 ILE CD1 C N N 106 ILE OXT O N N 107 ILE H H N N 108 ILE H2 H N N 109 ILE HA H N N 110 ILE HB H N N 111 ILE HG12 H N N 112 ILE HG13 H N N 113 ILE HG21 H N N 114 ILE HG22 H N N 115 ILE HG23 H N N 116 ILE HD11 H N N 117 ILE HD12 H N N 118 ILE HD13 H N N 119 ILE HXT H N N 120 LEU N N N N 121 LEU CA C N S 122 LEU C C N N 123 LEU O O N N 124 LEU CB C N N 125 LEU CG C N N 126 LEU CD1 C N N 127 LEU CD2 C N N 128 LEU OXT O N N 129 LEU H H N N 130 LEU H2 H N N 131 LEU HA H N N 132 LEU HB2 H N N 133 LEU HB3 H N N 134 LEU HG H N N 135 LEU HD11 H N N 136 LEU HD12 H N N 137 LEU HD13 H N N 138 LEU HD21 H N N 139 LEU HD22 H N N 140 LEU HD23 H N N 141 LEU HXT H N N 142 LYS N N N N 143 LYS CA C N S 144 LYS C C N N 145 LYS O O N N 146 LYS CB C N N 147 LYS CG C N N 148 LYS CD C N N 149 LYS CE C N N 150 LYS NZ N N N 151 LYS OXT O N N 152 LYS H H N N 153 LYS H2 H N N 154 LYS HA H N N 155 LYS HB2 H N N 156 LYS HB3 H N N 157 LYS HG2 H N N 158 LYS HG3 H N N 159 LYS HD2 H N N 160 LYS HD3 H N N 161 LYS HE2 H N N 162 LYS HE3 H N N 163 LYS HZ1 H N N 164 LYS HZ2 H N N 165 LYS HZ3 H N N 166 LYS HXT H N N 167 MPD C1 C N N 168 MPD C2 C N N 169 MPD O2 O N N 170 MPD CM C N N 171 MPD C3 C N N 172 MPD C4 C N S 173 MPD O4 O N N 174 MPD C5 C N N 175 MPD H11 H N N 176 MPD H12 H N N 177 MPD H13 H N N 178 MPD HO2 H N N 179 MPD HM1 H N N 180 MPD HM2 H N N 181 MPD HM3 H N N 182 MPD H31 H N N 183 MPD H32 H N N 184 MPD H4 H N N 185 MPD HO4 H N N 186 MPD H51 H N N 187 MPD H52 H N N 188 MPD H53 H N N 189 MRD C1 C N N 190 MRD C2 C N N 191 MRD O2 O N N 192 MRD CM C N N 193 MRD C3 C N N 194 MRD C4 C N R 195 MRD O4 O N N 196 MRD C5 C N N 197 MRD H1C1 H N N 198 MRD H1C2 H N N 199 MRD H1C3 H N N 200 MRD H2 H N N 201 MRD HMC1 H N N 202 MRD HMC2 H N N 203 MRD HMC3 H N N 204 MRD H3C1 H N N 205 MRD H3C2 H N N 206 MRD H4 H N N 207 MRD HA H N N 208 MRD H5C1 H N N 209 MRD H5C2 H N N 210 MRD H5C3 H N N 211 MSE N N N N 212 MSE CA C N S 213 MSE C C N N 214 MSE O O N N 215 MSE OXT O N N 216 MSE CB C N N 217 MSE CG C N N 218 MSE SE SE N N 219 MSE CE C N N 220 MSE H H N N 221 MSE H2 H N N 222 MSE HA H N N 223 MSE HXT H N N 224 MSE HB2 H N N 225 MSE HB3 H N N 226 MSE HG2 H N N 227 MSE HG3 H N N 228 MSE HE1 H N N 229 MSE HE2 H N N 230 MSE HE3 H N N 231 PHE N N N N 232 PHE CA C N S 233 PHE C C N N 234 PHE O O N N 235 PHE CB C N N 236 PHE CG C Y N 237 PHE CD1 C Y N 238 PHE CD2 C Y N 239 PHE CE1 C Y N 240 PHE CE2 C Y N 241 PHE CZ C Y N 242 PHE OXT O N N 243 PHE H H N N 244 PHE H2 H N N 245 PHE HA H N N 246 PHE HB2 H N N 247 PHE HB3 H N N 248 PHE HD1 H N N 249 PHE HD2 H N N 250 PHE HE1 H N N 251 PHE HE2 H N N 252 PHE HZ H N N 253 PHE HXT H N N 254 PO4 P P N N 255 PO4 O1 O N N 256 PO4 O2 O N N 257 PO4 O3 O N N 258 PO4 O4 O N N 259 THR N N N N 260 THR CA C N S 261 THR C C N N 262 THR O O N N 263 THR CB C N R 264 THR OG1 O N N 265 THR CG2 C N N 266 THR OXT O N N 267 THR H H N N 268 THR H2 H N N 269 THR HA H N N 270 THR HB H N N 271 THR HG1 H N N 272 THR HG21 H N N 273 THR HG22 H N N 274 THR HG23 H N N 275 THR HXT H N N 276 TRP N N N N 277 TRP CA C N S 278 TRP C C N N 279 TRP O O N N 280 TRP CB C N N 281 TRP CG C Y N 282 TRP CD1 C Y N 283 TRP CD2 C Y N 284 TRP NE1 N Y N 285 TRP CE2 C Y N 286 TRP CE3 C Y N 287 TRP CZ2 C Y N 288 TRP CZ3 C Y N 289 TRP CH2 C Y N 290 TRP OXT O N N 291 TRP H H N N 292 TRP H2 H N N 293 TRP HA H N N 294 TRP HB2 H N N 295 TRP HB3 H N N 296 TRP HD1 H N N 297 TRP HE1 H N N 298 TRP HE3 H N N 299 TRP HZ2 H N N 300 TRP HZ3 H N N 301 TRP HH2 H N N 302 TRP HXT H N N 303 TYR N N N N 304 TYR CA C N S 305 TYR C C N N 306 TYR O O N N 307 TYR CB C N N 308 TYR CG C Y N 309 TYR CD1 C Y N 310 TYR CD2 C Y N 311 TYR CE1 C Y N 312 TYR CE2 C Y N 313 TYR CZ C Y N 314 TYR OH O N N 315 TYR OXT O N N 316 TYR H H N N 317 TYR H2 H N N 318 TYR HA H N N 319 TYR HB2 H N N 320 TYR HB3 H N N 321 TYR HD1 H N N 322 TYR HD2 H N N 323 TYR HE1 H N N 324 TYR HE2 H N N 325 TYR HH H N N 326 TYR HXT H N N 327 VAL N N N N 328 VAL CA C N S 329 VAL C C N N 330 VAL O O N N 331 VAL CB C N N 332 VAL CG1 C N N 333 VAL CG2 C N N 334 VAL OXT O N N 335 VAL H H N N 336 VAL H2 H N N 337 VAL HA H N N 338 VAL HB H N N 339 VAL HG11 H N N 340 VAL HG12 H N N 341 VAL HG13 H N N 342 VAL HG21 H N N 343 VAL HG22 H N N 344 VAL HG23 H N N 345 VAL HXT H N N 346 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ASN N CA sing N N 13 ASN N H sing N N 14 ASN N H2 sing N N 15 ASN CA C sing N N 16 ASN CA CB sing N N 17 ASN CA HA sing N N 18 ASN C O doub N N 19 ASN C OXT sing N N 20 ASN CB CG sing N N 21 ASN CB HB2 sing N N 22 ASN CB HB3 sing N N 23 ASN CG OD1 doub N N 24 ASN CG ND2 sing N N 25 ASN ND2 HD21 sing N N 26 ASN ND2 HD22 sing N N 27 ASN OXT HXT sing N N 28 ASP N CA sing N N 29 ASP N H sing N N 30 ASP N H2 sing N N 31 ASP CA C sing N N 32 ASP CA CB sing N N 33 ASP CA HA sing N N 34 ASP C O doub N N 35 ASP C OXT sing N N 36 ASP CB CG sing N N 37 ASP CB HB2 sing N N 38 ASP CB HB3 sing N N 39 ASP CG OD1 doub N N 40 ASP CG OD2 sing N N 41 ASP OD2 HD2 sing N N 42 ASP OXT HXT sing N N 43 GLN N CA sing N N 44 GLN N H sing N N 45 GLN N H2 sing N N 46 GLN CA C sing N N 47 GLN CA CB sing N N 48 GLN CA HA sing N N 49 GLN C O doub N N 50 GLN C OXT sing N N 51 GLN CB CG sing N N 52 GLN CB HB2 sing N N 53 GLN CB HB3 sing N N 54 GLN CG CD sing N N 55 GLN CG HG2 sing N N 56 GLN CG HG3 sing N N 57 GLN CD OE1 doub N N 58 GLN CD NE2 sing N N 59 GLN NE2 HE21 sing N N 60 GLN NE2 HE22 sing N N 61 GLN OXT HXT sing N N 62 GLU N CA sing N N 63 GLU N H sing N N 64 GLU N H2 sing N N 65 GLU CA C sing N N 66 GLU CA CB sing N N 67 GLU CA HA sing N N 68 GLU C O doub N N 69 GLU C OXT sing N N 70 GLU CB CG sing N N 71 GLU CB HB2 sing N N 72 GLU CB HB3 sing N N 73 GLU CG CD sing N N 74 GLU CG HG2 sing N N 75 GLU CG HG3 sing N N 76 GLU CD OE1 doub N N 77 GLU CD OE2 sing N N 78 GLU OE2 HE2 sing N N 79 GLU OXT HXT sing N N 80 GLY N CA sing N N 81 GLY N H sing N N 82 GLY N H2 sing N N 83 GLY CA C sing N N 84 GLY CA HA2 sing N N 85 GLY CA HA3 sing N N 86 GLY C O doub N N 87 GLY C OXT sing N N 88 GLY OXT HXT sing N N 89 HOH O H1 sing N N 90 HOH O H2 sing N N 91 ILE N CA sing N N 92 ILE N H sing N N 93 ILE N H2 sing N N 94 ILE CA C sing N N 95 ILE CA CB sing N N 96 ILE CA HA sing N N 97 ILE C O doub N N 98 ILE C OXT sing N N 99 ILE CB CG1 sing N N 100 ILE CB CG2 sing N N 101 ILE CB HB sing N N 102 ILE CG1 CD1 sing N N 103 ILE CG1 HG12 sing N N 104 ILE CG1 HG13 sing N N 105 ILE CG2 HG21 sing N N 106 ILE CG2 HG22 sing N N 107 ILE CG2 HG23 sing N N 108 ILE CD1 HD11 sing N N 109 ILE CD1 HD12 sing N N 110 ILE CD1 HD13 sing N N 111 ILE OXT HXT sing N N 112 LEU N CA sing N N 113 LEU N H sing N N 114 LEU N H2 sing N N 115 LEU CA C sing N N 116 LEU CA CB sing N N 117 LEU CA HA sing N N 118 LEU C O doub N N 119 LEU C OXT sing N N 120 LEU CB CG sing N N 121 LEU CB HB2 sing N N 122 LEU CB HB3 sing N N 123 LEU CG CD1 sing N N 124 LEU CG CD2 sing N N 125 LEU CG HG sing N N 126 LEU CD1 HD11 sing N N 127 LEU CD1 HD12 sing N N 128 LEU CD1 HD13 sing N N 129 LEU CD2 HD21 sing N N 130 LEU CD2 HD22 sing N N 131 LEU CD2 HD23 sing N N 132 LEU OXT HXT sing N N 133 LYS N CA sing N N 134 LYS N H sing N N 135 LYS N H2 sing N N 136 LYS CA C sing N N 137 LYS CA CB sing N N 138 LYS CA HA sing N N 139 LYS C O doub N N 140 LYS C OXT sing N N 141 LYS CB CG sing N N 142 LYS CB HB2 sing N N 143 LYS CB HB3 sing N N 144 LYS CG CD sing N N 145 LYS CG HG2 sing N N 146 LYS CG HG3 sing N N 147 LYS CD CE sing N N 148 LYS CD HD2 sing N N 149 LYS CD HD3 sing N N 150 LYS CE NZ sing N N 151 LYS CE HE2 sing N N 152 LYS CE HE3 sing N N 153 LYS NZ HZ1 sing N N 154 LYS NZ HZ2 sing N N 155 LYS NZ HZ3 sing N N 156 LYS OXT HXT sing N N 157 MPD C1 C2 sing N N 158 MPD C1 H11 sing N N 159 MPD C1 H12 sing N N 160 MPD C1 H13 sing N N 161 MPD C2 O2 sing N N 162 MPD C2 CM sing N N 163 MPD C2 C3 sing N N 164 MPD O2 HO2 sing N N 165 MPD CM HM1 sing N N 166 MPD CM HM2 sing N N 167 MPD CM HM3 sing N N 168 MPD C3 C4 sing N N 169 MPD C3 H31 sing N N 170 MPD C3 H32 sing N N 171 MPD C4 O4 sing N N 172 MPD C4 C5 sing N N 173 MPD C4 H4 sing N N 174 MPD O4 HO4 sing N N 175 MPD C5 H51 sing N N 176 MPD C5 H52 sing N N 177 MPD C5 H53 sing N N 178 MRD C1 C2 sing N N 179 MRD C1 H1C1 sing N N 180 MRD C1 H1C2 sing N N 181 MRD C1 H1C3 sing N N 182 MRD C2 O2 sing N N 183 MRD C2 CM sing N N 184 MRD C2 C3 sing N N 185 MRD O2 H2 sing N N 186 MRD CM HMC1 sing N N 187 MRD CM HMC2 sing N N 188 MRD CM HMC3 sing N N 189 MRD C3 C4 sing N N 190 MRD C3 H3C1 sing N N 191 MRD C3 H3C2 sing N N 192 MRD C4 O4 sing N N 193 MRD C4 C5 sing N N 194 MRD C4 H4 sing N N 195 MRD O4 HA sing N N 196 MRD C5 H5C1 sing N N 197 MRD C5 H5C2 sing N N 198 MRD C5 H5C3 sing N N 199 MSE N CA sing N N 200 MSE N H sing N N 201 MSE N H2 sing N N 202 MSE CA C sing N N 203 MSE CA CB sing N N 204 MSE CA HA sing N N 205 MSE C O doub N N 206 MSE C OXT sing N N 207 MSE OXT HXT sing N N 208 MSE CB CG sing N N 209 MSE CB HB2 sing N N 210 MSE CB HB3 sing N N 211 MSE CG SE sing N N 212 MSE CG HG2 sing N N 213 MSE CG HG3 sing N N 214 MSE SE CE sing N N 215 MSE CE HE1 sing N N 216 MSE CE HE2 sing N N 217 MSE CE HE3 sing N N 218 PHE N CA sing N N 219 PHE N H sing N N 220 PHE N H2 sing N N 221 PHE CA C sing N N 222 PHE CA CB sing N N 223 PHE CA HA sing N N 224 PHE C O doub N N 225 PHE C OXT sing N N 226 PHE CB CG sing N N 227 PHE CB HB2 sing N N 228 PHE CB HB3 sing N N 229 PHE CG CD1 doub Y N 230 PHE CG CD2 sing Y N 231 PHE CD1 CE1 sing Y N 232 PHE CD1 HD1 sing N N 233 PHE CD2 CE2 doub Y N 234 PHE CD2 HD2 sing N N 235 PHE CE1 CZ doub Y N 236 PHE CE1 HE1 sing N N 237 PHE CE2 CZ sing Y N 238 PHE CE2 HE2 sing N N 239 PHE CZ HZ sing N N 240 PHE OXT HXT sing N N 241 PO4 P O1 doub N N 242 PO4 P O2 sing N N 243 PO4 P O3 sing N N 244 PO4 P O4 sing N N 245 THR N CA sing N N 246 THR N H sing N N 247 THR N H2 sing N N 248 THR CA C sing N N 249 THR CA CB sing N N 250 THR CA HA sing N N 251 THR C O doub N N 252 THR C OXT sing N N 253 THR CB OG1 sing N N 254 THR CB CG2 sing N N 255 THR CB HB sing N N 256 THR OG1 HG1 sing N N 257 THR CG2 HG21 sing N N 258 THR CG2 HG22 sing N N 259 THR CG2 HG23 sing N N 260 THR OXT HXT sing N N 261 TRP N CA sing N N 262 TRP N H sing N N 263 TRP N H2 sing N N 264 TRP CA C sing N N 265 TRP CA CB sing N N 266 TRP CA HA sing N N 267 TRP C O doub N N 268 TRP C OXT sing N N 269 TRP CB CG sing N N 270 TRP CB HB2 sing N N 271 TRP CB HB3 sing N N 272 TRP CG CD1 doub Y N 273 TRP CG CD2 sing Y N 274 TRP CD1 NE1 sing Y N 275 TRP CD1 HD1 sing N N 276 TRP CD2 CE2 doub Y N 277 TRP CD2 CE3 sing Y N 278 TRP NE1 CE2 sing Y N 279 TRP NE1 HE1 sing N N 280 TRP CE2 CZ2 sing Y N 281 TRP CE3 CZ3 doub Y N 282 TRP CE3 HE3 sing N N 283 TRP CZ2 CH2 doub Y N 284 TRP CZ2 HZ2 sing N N 285 TRP CZ3 CH2 sing Y N 286 TRP CZ3 HZ3 sing N N 287 TRP CH2 HH2 sing N N 288 TRP OXT HXT sing N N 289 TYR N CA sing N N 290 TYR N H sing N N 291 TYR N H2 sing N N 292 TYR CA C sing N N 293 TYR CA CB sing N N 294 TYR CA HA sing N N 295 TYR C O doub N N 296 TYR C OXT sing N N 297 TYR CB CG sing N N 298 TYR CB HB2 sing N N 299 TYR CB HB3 sing N N 300 TYR CG CD1 doub Y N 301 TYR CG CD2 sing Y N 302 TYR CD1 CE1 sing Y N 303 TYR CD1 HD1 sing N N 304 TYR CD2 CE2 doub Y N 305 TYR CD2 HD2 sing N N 306 TYR CE1 CZ doub Y N 307 TYR CE1 HE1 sing N N 308 TYR CE2 CZ sing Y N 309 TYR CE2 HE2 sing N N 310 TYR CZ OH sing N N 311 TYR OH HH sing N N 312 TYR OXT HXT sing N N 313 VAL N CA sing N N 314 VAL N H sing N N 315 VAL N H2 sing N N 316 VAL CA C sing N N 317 VAL CA CB sing N N 318 VAL CA HA sing N N 319 VAL C O doub N N 320 VAL C OXT sing N N 321 VAL CB CG1 sing N N 322 VAL CB CG2 sing N N 323 VAL CB HB sing N N 324 VAL CG1 HG11 sing N N 325 VAL CG1 HG12 sing N N 326 VAL CG1 HG13 sing N N 327 VAL CG2 HG21 sing N N 328 VAL CG2 HG22 sing N N 329 VAL CG2 HG23 sing N N 330 VAL OXT HXT sing N N 331 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' '5 P30 GM110758-02' 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' '5 P20 GM104316' 2 'National Science Foundation (NSF, United States)' 'United States' MCB-1616178 3 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '(4R)-2-METHYLPENTANE-2,4-DIOL' MRD 3 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD 4 'PHOSPHATE ION' PO4 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2QMT _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'mass spectrometry' _pdbx_struct_assembly_auth_evidence.details 'Mass spectrometry and SDS-PAGE gel were performed; as well as gel filtration chromatography' #