HEADER TRANSFERASE 14-MAR-18 6CQD TITLE CRYSTAL STRUCTURE OF HPK1 IN COMPLEX WITH ATP ANALOGUE (AMPPNP) COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE KINASE 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: HKP1, HEMATOPOIETIC PROGENITOR KINASE, MAPK/ERK KINASE COMPND 5 KINASE KINASE 1, MEKKK 1; COMPND 6 EC: 2.7.11.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MAP4K1, HPK1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS PROTEIN KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR P.WU,I.LEHOUX,Y.FRANKE,K.MORTARA,W.WANG REVDAT 3 13-MAR-24 6CQD 1 LINK REVDAT 2 16-JAN-19 6CQD 1 JRNL REVDAT 1 19-DEC-18 6CQD 0 JRNL AUTH P.WU,C.J.SNEERINGER,K.E.PITTS,E.S.DAY,B.K.CHAN,B.WEI, JRNL AUTH 2 I.LEHOUX,K.MORTARA,H.LI,J.WU,Y.FRANKE,J.G.MOFFAT,J.L.GROGAN, JRNL AUTH 3 T.P.HEFFRON,W.WANG JRNL TITL HEMATOPOIETIC PROGENITOR KINASE-1 STRUCTURE IN A JRNL TITL 2 DOMAIN-SWAPPED DIMER. JRNL REF STRUCTURE V. 27 125 2019 JRNL REFN ISSN 1878-4186 JRNL PMID 30503777 JRNL DOI 10.1016/J.STR.2018.10.025 REMARK 2 REMARK 2 RESOLUTION. 2.12 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.12 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.99 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 3 NUMBER OF REFLECTIONS : 34951 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 3303 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.9981 - 6.1109 0.99 2654 156 0.1503 0.1715 REMARK 3 2 6.1109 - 4.8520 0.95 2523 165 0.1570 0.1847 REMARK 3 3 4.8520 - 4.2391 0.98 2618 158 0.1330 0.1855 REMARK 3 4 4.2391 - 3.8517 0.98 2622 147 0.1514 0.1975 REMARK 3 5 3.8517 - 3.5758 0.96 2570 151 0.1787 0.2097 REMARK 3 6 3.5758 - 3.3650 0.96 2614 132 0.1951 0.2616 REMARK 3 7 3.3650 - 3.1965 0.93 2523 120 0.2184 0.3349 REMARK 3 8 3.1965 - 3.0574 0.96 2549 116 0.2346 0.3037 REMARK 3 9 3.0574 - 2.9397 0.97 2637 145 0.2417 0.2869 REMARK 3 10 2.9397 - 2.8383 0.97 2561 147 0.2437 0.2855 REMARK 3 11 2.8383 - 2.7496 0.97 2588 158 0.2463 0.2955 REMARK 3 12 2.7496 - 2.6710 0.97 2618 119 0.2367 0.2894 REMARK 3 13 2.6710 - 2.6007 0.97 2628 119 0.2453 0.3362 REMARK 3 14 2.6007 - 2.5372 0.97 2636 135 0.2379 0.2966 REMARK 3 15 2.5372 - 2.4795 0.96 2607 121 0.2483 0.3021 REMARK 3 16 2.4795 - 2.4268 0.96 2522 138 0.2505 0.3309 REMARK 3 17 2.4268 - 2.3782 0.95 2580 111 0.2435 0.2846 REMARK 3 18 2.3782 - 2.3334 0.92 2437 158 0.2705 0.3244 REMARK 3 19 2.3334 - 2.2917 0.92 2494 141 0.2615 0.3597 REMARK 3 20 2.2917 - 2.2528 0.94 2523 120 0.2777 0.3298 REMARK 3 21 2.2528 - 2.2165 0.95 2622 166 0.2840 0.3310 REMARK 3 22 2.2165 - 2.1824 0.96 2497 146 0.2926 0.3008 REMARK 3 23 2.1824 - 2.1503 0.95 2610 104 0.2966 0.3504 REMARK 3 24 2.1503 - 2.1200 0.94 2527 130 0.3243 0.4060 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.010 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 4749 REMARK 3 ANGLE : 0.847 6415 REMARK 3 CHIRALITY : 0.030 719 REMARK 3 PLANARITY : 0.004 802 REMARK 3 DIHEDRAL : 14.486 1763 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESI 2:93 REMARK 3 ORIGIN FOR THE GROUP (A): 14.4348 9.5852 12.8207 REMARK 3 T TENSOR REMARK 3 T11: 0.3404 T22: 0.2227 REMARK 3 T33: 0.3081 T12: 0.0688 REMARK 3 T13: -0.0513 T23: -0.0142 REMARK 3 L TENSOR REMARK 3 L11: 0.3843 L22: 0.2132 REMARK 3 L33: 0.5661 L12: 0.2034 REMARK 3 L13: 0.0040 L23: -0.1443 REMARK 3 S TENSOR REMARK 3 S11: -0.1610 S12: -0.0468 S13: 0.0502 REMARK 3 S21: 0.1183 S22: 0.0745 S23: -0.0592 REMARK 3 S31: -0.5241 S32: -0.0580 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESI 94:294 REMARK 3 ORIGIN FOR THE GROUP (A): 18.5789 -10.2274 26.9589 REMARK 3 T TENSOR REMARK 3 T11: 0.1432 T22: 0.1518 REMARK 3 T33: 0.1844 T12: -0.0192 REMARK 3 T13: 0.0011 T23: -0.0094 REMARK 3 L TENSOR REMARK 3 L11: 0.6434 L22: 0.9380 REMARK 3 L33: 1.8027 L12: -0.1932 REMARK 3 L13: 0.3552 L23: 0.0944 REMARK 3 S TENSOR REMARK 3 S11: 0.0332 S12: -0.0403 S13: -0.0245 REMARK 3 S21: 0.0958 S22: -0.0582 S23: 0.0512 REMARK 3 S31: 0.0325 S32: -0.1285 S33: -0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN B AND RESI 4:93 REMARK 3 ORIGIN FOR THE GROUP (A): 12.7691 24.9088 59.5205 REMARK 3 T TENSOR REMARK 3 T11: 0.3650 T22: 0.5224 REMARK 3 T33: 0.3887 T12: 0.0772 REMARK 3 T13: 0.0357 T23: 0.0710 REMARK 3 L TENSOR REMARK 3 L11: 0.1772 L22: 0.4252 REMARK 3 L33: 0.3893 L12: 0.0593 REMARK 3 L13: 0.1403 L23: 0.0294 REMARK 3 S TENSOR REMARK 3 S11: 0.0363 S12: 0.1278 S13: 0.0231 REMARK 3 S21: -0.3596 S22: 0.1569 S23: -0.0654 REMARK 3 S31: -0.2569 S32: -0.2039 S33: 0.0001 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN B AND RESI 94:294 REMARK 3 ORIGIN FOR THE GROUP (A): 25.4382 4.1211 61.2632 REMARK 3 T TENSOR REMARK 3 T11: 0.4161 T22: 0.2129 REMARK 3 T33: 0.1787 T12: 0.0322 REMARK 3 T13: 0.0662 T23: 0.0299 REMARK 3 L TENSOR REMARK 3 L11: 0.5888 L22: -0.2162 REMARK 3 L33: 1.1237 L12: -0.5525 REMARK 3 L13: 0.2566 L23: 0.3176 REMARK 3 S TENSOR REMARK 3 S11: -0.1015 S12: -0.0684 S13: 0.0713 REMARK 3 S21: -0.1237 S22: -0.0165 S23: -0.0101 REMARK 3 S31: 0.6599 S32: -0.0044 S33: -0.1307 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6CQD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1000233214. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-SEP-17 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35007 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.120 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.12 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.13 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES, PH 7.5, 12% PEG8000, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 73.44300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.94100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 73.44300 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 25.94100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -72.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 519 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 LYS A 49 REMARK 465 MET A 50 REMARK 465 GLU A 51 REMARK 465 PRO A 52 REMARK 465 ASN A 295 REMARK 465 SER A 296 REMARK 465 GLY B 0 REMARK 465 SER B 1 REMARK 465 ASP B 2 REMARK 465 VAL B 3 REMARK 465 ASN B 295 REMARK 465 SER B 296 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 54 -145.26 -89.02 REMARK 500 LEU A 84 -121.52 49.62 REMARK 500 GLN A 85 32.98 -98.32 REMARK 500 ARG A 136 -6.64 70.86 REMARK 500 ASP A 155 83.06 65.60 REMARK 500 LEU A 188 -65.55 -90.01 REMARK 500 LEU A 255 40.96 -92.97 REMARK 500 ASN A 293 -95.35 -117.27 REMARK 500 LEU B 20 -102.69 -114.19 REMARK 500 ASP B 137 39.07 -145.98 REMARK 500 ASP B 155 77.54 58.68 REMARK 500 PHE B 156 33.74 -93.97 REMARK 500 LYS B 189 60.83 -172.59 REMARK 500 LEU B 211 -2.32 71.95 REMARK 500 LEU B 255 47.80 -92.43 REMARK 500 ASN B 293 -87.74 -139.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 492 DISTANCE = 5.85 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 142 OD1 REMARK 620 2 ASP A 155 OD2 86.1 REMARK 620 3 ANP A 301 O1G 152.0 119.6 REMARK 620 4 ANP A 301 O2A 98.8 61.8 103.1 REMARK 620 5 HOH A 402 O 93.8 173.6 62.0 112.0 REMARK 620 6 HOH A 445 O 96.0 81.6 78.5 139.1 104.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 303 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 155 OD1 REMARK 620 2 ASP A 155 OD2 62.0 REMARK 620 3 ANP A 301 O3G 130.2 84.6 REMARK 620 4 ANP A 301 O2B 84.9 87.7 56.2 REMARK 620 5 HOH A 405 O 137.3 93.7 75.7 131.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 142 OD1 REMARK 620 2 ASP B 155 OD2 88.4 REMARK 620 3 ANP B 302 O2G 162.3 94.3 REMARK 620 4 ANP B 302 O3A 134.7 66.0 61.4 REMARK 620 5 ANP B 302 O2A 82.6 86.0 115.1 60.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ANP A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ANP B 302 DBREF 6CQD A 2 293 UNP Q92918 M4K1_HUMAN 2 293 DBREF 6CQD B 2 293 UNP Q92918 M4K1_HUMAN 2 293 SEQADV 6CQD GLY A 0 UNP Q92918 EXPRESSION TAG SEQADV 6CQD SER A 1 UNP Q92918 EXPRESSION TAG SEQADV 6CQD GLU A 165 UNP Q92918 THR 165 CONFLICT SEQADV 6CQD GLU A 171 UNP Q92918 SER 171 CONFLICT SEQADV 6CQD GLY A 294 UNP Q92918 EXPRESSION TAG SEQADV 6CQD ASN A 295 UNP Q92918 EXPRESSION TAG SEQADV 6CQD SER A 296 UNP Q92918 EXPRESSION TAG SEQADV 6CQD GLY B 0 UNP Q92918 EXPRESSION TAG SEQADV 6CQD SER B 1 UNP Q92918 EXPRESSION TAG SEQADV 6CQD GLU B 165 UNP Q92918 THR 165 CONFLICT SEQADV 6CQD GLU B 171 UNP Q92918 SER 171 CONFLICT SEQADV 6CQD GLY B 294 UNP Q92918 EXPRESSION TAG SEQADV 6CQD ASN B 295 UNP Q92918 EXPRESSION TAG SEQADV 6CQD SER B 296 UNP Q92918 EXPRESSION TAG SEQRES 1 A 297 GLY SER ASP VAL VAL ASP PRO ASP ILE PHE ASN ARG ASP SEQRES 2 A 297 PRO ARG ASP HIS TYR ASP LEU LEU GLN ARG LEU GLY GLY SEQRES 3 A 297 GLY THR TYR GLY GLU VAL PHE LYS ALA ARG ASP LYS VAL SEQRES 4 A 297 SER GLY ASP LEU VAL ALA LEU LYS MET VAL LYS MET GLU SEQRES 5 A 297 PRO ASP ASP ASP VAL SER THR LEU GLN LYS GLU ILE LEU SEQRES 6 A 297 ILE LEU LYS THR CYS ARG HIS ALA ASN ILE VAL ALA TYR SEQRES 7 A 297 HIS GLY SER TYR LEU TRP LEU GLN LYS LEU TRP ILE CYS SEQRES 8 A 297 MET GLU PHE CYS GLY ALA GLY SER LEU GLN ASP ILE TYR SEQRES 9 A 297 GLN VAL THR GLY SER LEU SER GLU LEU GLN ILE SER TYR SEQRES 10 A 297 VAL CYS ARG GLU VAL LEU GLN GLY LEU ALA TYR LEU HIS SEQRES 11 A 297 SER GLN LYS LYS ILE HIS ARG ASP ILE LYS GLY ALA ASN SEQRES 12 A 297 ILE LEU ILE ASN ASP ALA GLY GLU VAL ARG LEU ALA ASP SEQRES 13 A 297 PHE GLY ILE SER ALA GLN ILE GLY ALA GLU LEU ALA ARG SEQRES 14 A 297 ARG LEU GLU PHE ILE GLY THR PRO TYR TRP MET ALA PRO SEQRES 15 A 297 GLU VAL ALA ALA VAL ALA LEU LYS GLY GLY TYR ASN GLU SEQRES 16 A 297 LEU CYS ASP ILE TRP SER LEU GLY ILE THR ALA ILE GLU SEQRES 17 A 297 LEU ALA GLU LEU GLN PRO PRO LEU PHE ASP VAL HIS PRO SEQRES 18 A 297 LEU ARG VAL LEU PHE LEU MET THR LYS SER GLY TYR GLN SEQRES 19 A 297 PRO PRO ARG LEU LYS GLU LYS GLY LYS TRP SER ALA ALA SEQRES 20 A 297 PHE HIS ASN PHE ILE LYS VAL THR LEU THR LYS SER PRO SEQRES 21 A 297 LYS LYS ARG PRO SER ALA THR LYS MET LEU SER HIS GLN SEQRES 22 A 297 LEU VAL SER GLN PRO GLY LEU ASN ARG GLY LEU ILE LEU SEQRES 23 A 297 ASP LEU LEU ASP LYS LEU LYS ASN GLY ASN SER SEQRES 1 B 297 GLY SER ASP VAL VAL ASP PRO ASP ILE PHE ASN ARG ASP SEQRES 2 B 297 PRO ARG ASP HIS TYR ASP LEU LEU GLN ARG LEU GLY GLY SEQRES 3 B 297 GLY THR TYR GLY GLU VAL PHE LYS ALA ARG ASP LYS VAL SEQRES 4 B 297 SER GLY ASP LEU VAL ALA LEU LYS MET VAL LYS MET GLU SEQRES 5 B 297 PRO ASP ASP ASP VAL SER THR LEU GLN LYS GLU ILE LEU SEQRES 6 B 297 ILE LEU LYS THR CYS ARG HIS ALA ASN ILE VAL ALA TYR SEQRES 7 B 297 HIS GLY SER TYR LEU TRP LEU GLN LYS LEU TRP ILE CYS SEQRES 8 B 297 MET GLU PHE CYS GLY ALA GLY SER LEU GLN ASP ILE TYR SEQRES 9 B 297 GLN VAL THR GLY SER LEU SER GLU LEU GLN ILE SER TYR SEQRES 10 B 297 VAL CYS ARG GLU VAL LEU GLN GLY LEU ALA TYR LEU HIS SEQRES 11 B 297 SER GLN LYS LYS ILE HIS ARG ASP ILE LYS GLY ALA ASN SEQRES 12 B 297 ILE LEU ILE ASN ASP ALA GLY GLU VAL ARG LEU ALA ASP SEQRES 13 B 297 PHE GLY ILE SER ALA GLN ILE GLY ALA GLU LEU ALA ARG SEQRES 14 B 297 ARG LEU GLU PHE ILE GLY THR PRO TYR TRP MET ALA PRO SEQRES 15 B 297 GLU VAL ALA ALA VAL ALA LEU LYS GLY GLY TYR ASN GLU SEQRES 16 B 297 LEU CYS ASP ILE TRP SER LEU GLY ILE THR ALA ILE GLU SEQRES 17 B 297 LEU ALA GLU LEU GLN PRO PRO LEU PHE ASP VAL HIS PRO SEQRES 18 B 297 LEU ARG VAL LEU PHE LEU MET THR LYS SER GLY TYR GLN SEQRES 19 B 297 PRO PRO ARG LEU LYS GLU LYS GLY LYS TRP SER ALA ALA SEQRES 20 B 297 PHE HIS ASN PHE ILE LYS VAL THR LEU THR LYS SER PRO SEQRES 21 B 297 LYS LYS ARG PRO SER ALA THR LYS MET LEU SER HIS GLN SEQRES 22 B 297 LEU VAL SER GLN PRO GLY LEU ASN ARG GLY LEU ILE LEU SEQRES 23 B 297 ASP LEU LEU ASP LYS LEU LYS ASN GLY ASN SER HET ANP A 301 31 HET MG A 302 1 HET MG A 303 1 HET MG B 301 1 HET ANP B 302 31 HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER HETNAM MG MAGNESIUM ION FORMUL 3 ANP 2(C10 H17 N6 O12 P3) FORMUL 4 MG 3(MG 2+) FORMUL 8 HOH *217(H2 O) HELIX 1 AA1 ASP A 12 ASP A 15 5 4 HELIX 2 AA2 ASP A 55 GLN A 60 1 6 HELIX 3 AA3 GLN A 60 CYS A 69 1 10 HELIX 4 AA4 SER A 98 GLY A 107 1 10 HELIX 5 AA5 SER A 110 GLN A 131 1 22 HELIX 6 AA6 LYS A 139 ALA A 141 5 3 HELIX 7 AA7 PHE A 156 ARG A 168 1 13 HELIX 8 AA8 THR A 175 MET A 179 5 5 HELIX 9 AA9 ALA A 180 GLY A 190 1 11 HELIX 10 AB1 GLU A 194 LEU A 211 1 18 HELIX 11 AB2 HIS A 219 LYS A 229 1 11 HELIX 12 AB3 SER A 244 LEU A 255 1 12 HELIX 13 AB4 SER A 264 LEU A 269 1 6 HELIX 14 AB5 SER A 270 SER A 275 5 6 HELIX 15 AB6 ARG A 281 ASN A 293 1 13 HELIX 16 AB7 ASP B 12 ASP B 15 5 4 HELIX 17 AB8 VAL B 56 THR B 68 1 13 HELIX 18 AB9 LEU B 99 GLY B 107 1 9 HELIX 19 AC1 SER B 110 SER B 130 1 21 HELIX 20 AC2 LYS B 139 ALA B 141 5 3 HELIX 21 AC3 PHE B 156 GLU B 171 1 16 HELIX 22 AC4 ALA B 180 GLY B 190 1 11 HELIX 23 AC5 LEU B 195 LEU B 211 1 17 HELIX 24 AC6 HIS B 219 LYS B 229 1 11 HELIX 25 AC7 SER B 244 LEU B 255 1 12 HELIX 26 AC8 SER B 264 SER B 270 1 7 HELIX 27 AC9 HIS B 271 GLN B 276 1 6 HELIX 28 AD1 ARG B 281 LYS B 292 1 12 SHEET 1 AA1 5 TYR A 17 GLY A 24 0 SHEET 2 AA1 5 VAL A 31 ASP A 36 -1 O VAL A 31 N LEU A 23 SHEET 3 AA1 5 LEU A 42 MET A 47 -1 O LEU A 45 N PHE A 32 SHEET 4 AA1 5 LYS A 86 GLU A 92 -1 O ILE A 89 N LYS A 46 SHEET 5 AA1 5 TYR A 77 TRP A 83 -1 N GLY A 79 O CYS A 90 SHEET 1 AA2 2 ILE A 143 ILE A 145 0 SHEET 2 AA2 2 VAL A 151 LEU A 153 -1 O ARG A 152 N LEU A 144 SHEET 1 AA3 5 TYR B 17 GLY B 24 0 SHEET 2 AA3 5 GLY B 29 ASP B 36 -1 O VAL B 31 N LEU B 23 SHEET 3 AA3 5 LEU B 42 LYS B 49 -1 O LEU B 45 N PHE B 32 SHEET 4 AA3 5 LYS B 86 GLU B 92 -1 O LEU B 87 N VAL B 48 SHEET 5 AA3 5 TYR B 77 TRP B 83 -1 N TYR B 81 O TRP B 88 SHEET 1 AA4 3 GLY B 97 SER B 98 0 SHEET 2 AA4 3 ILE B 143 ILE B 145 -1 O ILE B 145 N GLY B 97 SHEET 3 AA4 3 VAL B 151 LEU B 153 -1 O ARG B 152 N LEU B 144 LINK OD1 ASN A 142 MG MG A 302 1555 1555 2.17 LINK OD2 ASP A 155 MG MG A 302 1555 1555 2.15 LINK OD1 ASP A 155 MG MG A 303 1555 1555 2.18 LINK OD2 ASP A 155 MG MG A 303 1555 1555 2.12 LINK O1G ANP A 301 MG MG A 302 1555 1555 2.16 LINK O2A ANP A 301 MG MG A 302 1555 1555 2.15 LINK O3G ANP A 301 MG MG A 303 1555 1555 2.21 LINK O2B ANP A 301 MG MG A 303 1555 1555 2.29 LINK MG MG A 302 O HOH A 402 1555 1555 2.15 LINK MG MG A 302 O HOH A 445 1555 1555 2.17 LINK MG MG A 303 O HOH A 405 1555 1555 2.14 LINK OD1 ASN B 142 MG MG B 301 1555 1555 2.17 LINK OD2 ASP B 155 MG MG B 301 1555 1555 2.17 LINK MG MG B 301 O2G ANP B 302 1555 1555 2.17 LINK MG MG B 301 O3A ANP B 302 1555 1555 2.72 LINK MG MG B 301 O2A ANP B 302 1555 1555 2.17 SITE 1 AC1 21 LEU A 23 GLY A 26 VAL A 31 ALA A 44 SITE 2 AC1 21 LYS A 46 MET A 91 GLU A 92 CYS A 94 SITE 3 AC1 21 ASP A 101 ALA A 141 ASN A 142 LEU A 144 SITE 4 AC1 21 ASP A 155 MG A 302 MG A 303 HOH A 402 SITE 5 AC1 21 HOH A 405 HOH A 418 HOH A 445 HOH A 480 SITE 6 AC1 21 HOH A 498 SITE 1 AC2 5 ASN A 142 ASP A 155 ANP A 301 HOH A 402 SITE 2 AC2 5 HOH A 445 SITE 1 AC3 3 ASP A 155 ANP A 301 HOH A 405 SITE 1 AC4 3 ASN B 142 ASP B 155 ANP B 302 SITE 1 AC5 15 LEU B 23 GLY B 25 GLY B 26 VAL B 31 SITE 2 AC5 15 ALA B 44 LYS B 46 MET B 91 GLU B 92 SITE 3 AC5 15 CYS B 94 ASP B 101 ALA B 141 ASN B 142 SITE 4 AC5 15 LEU B 144 ASP B 155 MG B 301 CRYST1 146.886 51.882 107.500 90.00 131.03 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006808 0.000000 0.005924 0.00000 SCALE2 0.000000 0.019275 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012331 0.00000