HEADER MEMBRANE PROTEIN 21-MAR-18 6CSM TITLE CRYSTAL STRUCTURE OF THE NATURAL LIGHT-GATED ANION CHANNEL GTACR1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTACR1; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GUILLARDIA THETA CCMP2712; SOURCE 3 ORGANISM_TAXID: 905079; SOURCE 4 GENE: GUITHDRAFT_111593; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS RHODOPSIN, CHANNELRHODOPSIN, ANION CHANNEL, OPTOGENETICS, MEMBRANE KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.E.KATO,Y.KIM,K.YAMASHITA,B.K.KOBILKA,K.DEISSEROTH REVDAT 6 30-OCT-24 6CSM 1 REMARK REVDAT 5 04-OCT-23 6CSM 1 REMARK REVDAT 4 27-NOV-19 6CSM 1 REMARK REVDAT 3 03-OCT-18 6CSM 1 JRNL REVDAT 2 12-SEP-18 6CSM 1 JRNL REMARK REVDAT 1 05-SEP-18 6CSM 0 JRNL AUTH H.E.KATO,Y.S.KIM,J.M.PAGGI,K.E.EVANS,W.E.ALLEN,C.RICHARDSON, JRNL AUTH 2 K.INOUE,S.ITO,C.RAMAKRISHNAN,L.E.FENNO,K.YAMASHITA,D.HILGER, JRNL AUTH 3 S.Y.LEE,A.BERNDT,K.SHEN,H.KANDORI,R.O.DROR,B.K.KOBILKA, JRNL AUTH 4 K.DEISSEROTH JRNL TITL STRUCTURAL MECHANISMS OF SELECTIVITY AND GATING IN ANION JRNL TITL 2 CHANNELRHODOPSINS. JRNL REF NATURE V. 561 349 2018 JRNL REFN ESSN 1476-4687 JRNL PMID 30158697 JRNL DOI 10.1038/S41586-018-0504-5 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.17 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 33037 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.255 REMARK 3 R VALUE (WORKING SET) : 0.253 REMARK 3 FREE R VALUE : 0.286 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1650 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.1719 - 6.6330 0.98 2655 142 0.1972 0.2438 REMARK 3 2 6.6330 - 5.2674 1.00 2643 140 0.2371 0.2468 REMARK 3 3 5.2674 - 4.6023 1.00 2650 139 0.2178 0.2731 REMARK 3 4 4.6023 - 4.1818 1.00 2624 138 0.2098 0.2267 REMARK 3 5 4.1818 - 3.8823 1.00 2651 140 0.2389 0.2652 REMARK 3 6 3.8823 - 3.6535 1.00 2627 138 0.2520 0.3067 REMARK 3 7 3.6535 - 3.4706 1.00 2634 140 0.2947 0.3482 REMARK 3 8 3.4706 - 3.3196 1.00 2626 136 0.3114 0.3424 REMARK 3 9 3.3196 - 3.1918 1.00 2621 140 0.3175 0.3541 REMARK 3 10 3.1918 - 3.0817 0.99 2625 137 0.3304 0.3778 REMARK 3 11 3.0817 - 2.9853 0.97 2517 131 0.3554 0.3404 REMARK 3 12 2.9853 - 2.9000 0.94 2514 129 0.3631 0.3521 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.480 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.100 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 59.86 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 58.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 9030 REMARK 3 ANGLE : 0.557 12292 REMARK 3 CHIRALITY : 0.040 1401 REMARK 3 PLANARITY : 0.003 1464 REMARK 3 DIHEDRAL : 10.685 5275 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND RESID 4 THROUGH 273) REMARK 3 SELECTION : (CHAIN B AND (RESID 4 THROUGH 262 OR REMARK 3 (RESID 263 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 264 REMARK 3 THROUGH 273)) REMARK 3 ATOM PAIRS NUMBER : 5046 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: (CHAIN A AND RESID 4 THROUGH 273) REMARK 3 SELECTION : (CHAIN C AND (RESID 4 THROUGH 262 OR REMARK 3 (RESID 263 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 264 REMARK 3 THROUGH 273)) REMARK 3 ATOM PAIRS NUMBER : 5046 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 3 REMARK 3 REFERENCE SELECTION: (CHAIN A AND RESID 4 THROUGH 273) REMARK 3 SELECTION : (CHAIN D AND (RESID 4 THROUGH 262 OR REMARK 3 (RESID 263 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 264 REMARK 3 THROUGH 273)) REMARK 3 ATOM PAIRS NUMBER : 5046 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6CSM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1000233324. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUN-17; 22-NOV-16 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : APS; APS REMARK 200 BEAMLINE : 23-ID-B; 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0332; 1.0332 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL; PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M; DECTRIS REMARK 200 PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33398 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 45.166 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 14.52 REMARK 200 R MERGE (I) : 0.73600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 3.6900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.79 REMARK 200 R MERGE FOR SHELL (I) : 5.49600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.570 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MORDA REMARK 200 STARTING MODEL: 3UG9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10-12% (W/V) POLYPROPYLENE GLYCOL P REMARK 280 400 (PPG P400), 100 MM MES PH 6.0, 100 MM POTASSIUM FORMATE, 1-3% REMARK 280 1-BUTANOL., LIPIDIC CUBIC PHASE, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 75.01500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 279 REMARK 465 GLU A 280 REMARK 465 GLU B 274 REMARK 465 TYR B 275 REMARK 465 GLU B 276 REMARK 465 GLN B 277 REMARK 465 ASP B 278 REMARK 465 LEU B 279 REMARK 465 GLU B 280 REMARK 465 GLU C 274 REMARK 465 TYR C 275 REMARK 465 GLU C 276 REMARK 465 GLN C 277 REMARK 465 ASP C 278 REMARK 465 LEU C 279 REMARK 465 GLU C 280 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 4 CG1 CG2 CD1 REMARK 470 LYS A 263 CG CD CE NZ REMARK 470 ILE B 4 CG1 CG2 CD1 REMARK 470 ILE C 4 CG1 CG2 CD1 REMARK 470 ILE D 4 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PHE B 178 OG SER B 186 2.11 REMARK 500 O PHE D 178 OG SER D 186 2.12 REMARK 500 OH TYR C 207 OD1 ASP C 234 2.19 REMARK 500 OG SER B 183 O ARG B 265 2.19 REMARK 500 OG SER A 183 O ARG A 265 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 18 66.83 -115.31 REMARK 500 ARG A 53 46.48 -88.46 REMARK 500 PRO A 91 78.53 -66.65 REMARK 500 LYS A 118 -107.82 56.86 REMARK 500 LEU A 253 -159.98 -96.77 REMARK 500 TRP A 257 70.11 -66.93 REMARK 500 LEU A 271 157.48 67.07 REMARK 500 GLU A 274 23.75 -173.98 REMARK 500 GLU A 276 48.18 20.03 REMARK 500 ASN B 18 65.20 -115.13 REMARK 500 ARG B 53 46.37 -88.80 REMARK 500 PRO B 91 79.09 -67.35 REMARK 500 LYS B 118 -108.73 58.44 REMARK 500 LEU B 253 -159.56 -98.46 REMARK 500 TRP B 257 69.33 -68.30 REMARK 500 LYS B 263 98.43 -62.37 REMARK 500 ASN C 18 62.92 -113.90 REMARK 500 ARG C 53 46.66 -88.60 REMARK 500 PRO C 91 78.77 -66.41 REMARK 500 LYS C 118 -108.06 58.07 REMARK 500 TRP C 257 71.92 -67.82 REMARK 500 LEU C 271 146.66 -33.86 REMARK 500 ASN D 18 66.73 -116.31 REMARK 500 ARG D 53 46.84 -88.85 REMARK 500 PRO D 91 78.73 -66.50 REMARK 500 LYS D 118 -109.15 57.93 REMARK 500 TRP D 257 71.37 -66.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 OLA A 402 REMARK 610 OLA A 403 REMARK 610 OLA B 402 REMARK 610 OLA C 402 REMARK 610 OLA D 402 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue RET A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLA A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLA B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLA C 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLA D 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide RET B 401 and LYS B REMARK 800 238 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide RET C 401 and LYS C REMARK 800 238 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide RET D 401 and LYS D REMARK 800 238 DBREF 6CSM A 4 280 UNP L1J207 L1J207_GUITH 4 280 DBREF 6CSM B 4 280 UNP L1J207 L1J207_GUITH 4 280 DBREF 6CSM C 4 280 UNP L1J207 L1J207_GUITH 4 280 DBREF 6CSM D 4 280 UNP L1J207 L1J207_GUITH 4 280 SEQRES 1 A 277 ILE THR CYS ASP PRO ALA ILE TYR GLY GLU TRP SER ARG SEQRES 2 A 277 GLU ASN GLN PHE CYS VAL GLU LYS SER LEU ILE THR LEU SEQRES 3 A 277 ASP GLY ILE LYS TYR VAL GLN LEU VAL MET ALA VAL VAL SEQRES 4 A 277 SER ALA CYS GLN VAL PHE PHE MET VAL THR ARG ALA PRO SEQRES 5 A 277 LYS VAL PRO TRP GLU ALA ILE TYR LEU PRO THR THR GLU SEQRES 6 A 277 MET ILE THR TYR SER LEU ALA PHE THR GLY ASN GLY TYR SEQRES 7 A 277 ILE ARG VAL ALA ASN GLY LYS TYR LEU PRO TRP ALA ARG SEQRES 8 A 277 MET ALA SER TRP LEU CYS THR CYS PRO ILE MET LEU GLY SEQRES 9 A 277 LEU VAL SER ASN MET ALA LEU VAL LYS TYR LYS SER ILE SEQRES 10 A 277 PRO LEU ASN PRO MET MET ILE ALA ALA SER SER ILE CYS SEQRES 11 A 277 THR VAL PHE GLY ILE THR ALA SER VAL VAL LEU ASP PRO SEQRES 12 A 277 LEU HIS VAL TRP LEU TYR CYS PHE ILE SER SER ILE PHE SEQRES 13 A 277 PHE ILE PHE GLU MET VAL VAL ALA PHE ALA ILE PHE ALA SEQRES 14 A 277 ILE THR ILE HIS ASP PHE GLN THR ILE GLY SER PRO MET SEQRES 15 A 277 SER LEU LYS VAL VAL GLU ARG LEU LYS LEU MET ARG ILE SEQRES 16 A 277 VAL PHE TYR VAL SER TRP MET ALA TYR PRO ILE LEU TRP SEQRES 17 A 277 SER PHE SER SER THR GLY ALA CYS ILE MET SER GLU ASN SEQRES 18 A 277 THR SER SER VAL LEU TYR LEU LEU GLY ASP ALA LEU CYS SEQRES 19 A 277 LYS ASN THR TYR GLY ILE LEU LEU TRP ALA THR THR TRP SEQRES 20 A 277 GLY LEU LEU ASN GLY LYS TRP ASP ARG ASP TYR VAL LYS SEQRES 21 A 277 GLY ARG ASN VAL ASP GLY THR LEU MET PRO GLU TYR GLU SEQRES 22 A 277 GLN ASP LEU GLU SEQRES 1 B 277 ILE THR CYS ASP PRO ALA ILE TYR GLY GLU TRP SER ARG SEQRES 2 B 277 GLU ASN GLN PHE CYS VAL GLU LYS SER LEU ILE THR LEU SEQRES 3 B 277 ASP GLY ILE LYS TYR VAL GLN LEU VAL MET ALA VAL VAL SEQRES 4 B 277 SER ALA CYS GLN VAL PHE PHE MET VAL THR ARG ALA PRO SEQRES 5 B 277 LYS VAL PRO TRP GLU ALA ILE TYR LEU PRO THR THR GLU SEQRES 6 B 277 MET ILE THR TYR SER LEU ALA PHE THR GLY ASN GLY TYR SEQRES 7 B 277 ILE ARG VAL ALA ASN GLY LYS TYR LEU PRO TRP ALA ARG SEQRES 8 B 277 MET ALA SER TRP LEU CYS THR CYS PRO ILE MET LEU GLY SEQRES 9 B 277 LEU VAL SER ASN MET ALA LEU VAL LYS TYR LYS SER ILE SEQRES 10 B 277 PRO LEU ASN PRO MET MET ILE ALA ALA SER SER ILE CYS SEQRES 11 B 277 THR VAL PHE GLY ILE THR ALA SER VAL VAL LEU ASP PRO SEQRES 12 B 277 LEU HIS VAL TRP LEU TYR CYS PHE ILE SER SER ILE PHE SEQRES 13 B 277 PHE ILE PHE GLU MET VAL VAL ALA PHE ALA ILE PHE ALA SEQRES 14 B 277 ILE THR ILE HIS ASP PHE GLN THR ILE GLY SER PRO MET SEQRES 15 B 277 SER LEU LYS VAL VAL GLU ARG LEU LYS LEU MET ARG ILE SEQRES 16 B 277 VAL PHE TYR VAL SER TRP MET ALA TYR PRO ILE LEU TRP SEQRES 17 B 277 SER PHE SER SER THR GLY ALA CYS ILE MET SER GLU ASN SEQRES 18 B 277 THR SER SER VAL LEU TYR LEU LEU GLY ASP ALA LEU CYS SEQRES 19 B 277 LYS ASN THR TYR GLY ILE LEU LEU TRP ALA THR THR TRP SEQRES 20 B 277 GLY LEU LEU ASN GLY LYS TRP ASP ARG ASP TYR VAL LYS SEQRES 21 B 277 GLY ARG ASN VAL ASP GLY THR LEU MET PRO GLU TYR GLU SEQRES 22 B 277 GLN ASP LEU GLU SEQRES 1 C 277 ILE THR CYS ASP PRO ALA ILE TYR GLY GLU TRP SER ARG SEQRES 2 C 277 GLU ASN GLN PHE CYS VAL GLU LYS SER LEU ILE THR LEU SEQRES 3 C 277 ASP GLY ILE LYS TYR VAL GLN LEU VAL MET ALA VAL VAL SEQRES 4 C 277 SER ALA CYS GLN VAL PHE PHE MET VAL THR ARG ALA PRO SEQRES 5 C 277 LYS VAL PRO TRP GLU ALA ILE TYR LEU PRO THR THR GLU SEQRES 6 C 277 MET ILE THR TYR SER LEU ALA PHE THR GLY ASN GLY TYR SEQRES 7 C 277 ILE ARG VAL ALA ASN GLY LYS TYR LEU PRO TRP ALA ARG SEQRES 8 C 277 MET ALA SER TRP LEU CYS THR CYS PRO ILE MET LEU GLY SEQRES 9 C 277 LEU VAL SER ASN MET ALA LEU VAL LYS TYR LYS SER ILE SEQRES 10 C 277 PRO LEU ASN PRO MET MET ILE ALA ALA SER SER ILE CYS SEQRES 11 C 277 THR VAL PHE GLY ILE THR ALA SER VAL VAL LEU ASP PRO SEQRES 12 C 277 LEU HIS VAL TRP LEU TYR CYS PHE ILE SER SER ILE PHE SEQRES 13 C 277 PHE ILE PHE GLU MET VAL VAL ALA PHE ALA ILE PHE ALA SEQRES 14 C 277 ILE THR ILE HIS ASP PHE GLN THR ILE GLY SER PRO MET SEQRES 15 C 277 SER LEU LYS VAL VAL GLU ARG LEU LYS LEU MET ARG ILE SEQRES 16 C 277 VAL PHE TYR VAL SER TRP MET ALA TYR PRO ILE LEU TRP SEQRES 17 C 277 SER PHE SER SER THR GLY ALA CYS ILE MET SER GLU ASN SEQRES 18 C 277 THR SER SER VAL LEU TYR LEU LEU GLY ASP ALA LEU CYS SEQRES 19 C 277 LYS ASN THR TYR GLY ILE LEU LEU TRP ALA THR THR TRP SEQRES 20 C 277 GLY LEU LEU ASN GLY LYS TRP ASP ARG ASP TYR VAL LYS SEQRES 21 C 277 GLY ARG ASN VAL ASP GLY THR LEU MET PRO GLU TYR GLU SEQRES 22 C 277 GLN ASP LEU GLU SEQRES 1 D 277 ILE THR CYS ASP PRO ALA ILE TYR GLY GLU TRP SER ARG SEQRES 2 D 277 GLU ASN GLN PHE CYS VAL GLU LYS SER LEU ILE THR LEU SEQRES 3 D 277 ASP GLY ILE LYS TYR VAL GLN LEU VAL MET ALA VAL VAL SEQRES 4 D 277 SER ALA CYS GLN VAL PHE PHE MET VAL THR ARG ALA PRO SEQRES 5 D 277 LYS VAL PRO TRP GLU ALA ILE TYR LEU PRO THR THR GLU SEQRES 6 D 277 MET ILE THR TYR SER LEU ALA PHE THR GLY ASN GLY TYR SEQRES 7 D 277 ILE ARG VAL ALA ASN GLY LYS TYR LEU PRO TRP ALA ARG SEQRES 8 D 277 MET ALA SER TRP LEU CYS THR CYS PRO ILE MET LEU GLY SEQRES 9 D 277 LEU VAL SER ASN MET ALA LEU VAL LYS TYR LYS SER ILE SEQRES 10 D 277 PRO LEU ASN PRO MET MET ILE ALA ALA SER SER ILE CYS SEQRES 11 D 277 THR VAL PHE GLY ILE THR ALA SER VAL VAL LEU ASP PRO SEQRES 12 D 277 LEU HIS VAL TRP LEU TYR CYS PHE ILE SER SER ILE PHE SEQRES 13 D 277 PHE ILE PHE GLU MET VAL VAL ALA PHE ALA ILE PHE ALA SEQRES 14 D 277 ILE THR ILE HIS ASP PHE GLN THR ILE GLY SER PRO MET SEQRES 15 D 277 SER LEU LYS VAL VAL GLU ARG LEU LYS LEU MET ARG ILE SEQRES 16 D 277 VAL PHE TYR VAL SER TRP MET ALA TYR PRO ILE LEU TRP SEQRES 17 D 277 SER PHE SER SER THR GLY ALA CYS ILE MET SER GLU ASN SEQRES 18 D 277 THR SER SER VAL LEU TYR LEU LEU GLY ASP ALA LEU CYS SEQRES 19 D 277 LYS ASN THR TYR GLY ILE LEU LEU TRP ALA THR THR TRP SEQRES 20 D 277 GLY LEU LEU ASN GLY LYS TRP ASP ARG ASP TYR VAL LYS SEQRES 21 D 277 GLY ARG ASN VAL ASP GLY THR LEU MET PRO GLU TYR GLU SEQRES 22 D 277 GLN ASP LEU GLU HET RET A 401 20 HET OLA A 402 16 HET OLA A 403 16 HET RET B 401 20 HET OLA B 402 19 HET RET C 401 20 HET OLA C 402 16 HET RET D 401 20 HET OLA D 402 17 HETNAM RET RETINAL HETNAM OLA OLEIC ACID FORMUL 5 RET 4(C20 H28 O) FORMUL 6 OLA 5(C18 H34 O2) FORMUL 14 HOH *4(H2 O) HELIX 1 AA1 GLY A 12 ASN A 18 1 7 HELIX 2 AA2 ASN A 18 LYS A 24 1 7 HELIX 3 AA3 LEU A 29 ARG A 53 1 25 HELIX 4 AA4 TRP A 59 THR A 77 1 19 HELIX 5 AA5 TRP A 92 ASN A 111 1 20 HELIX 6 AA6 LEU A 122 SER A 141 1 20 HELIX 7 AA7 ASP A 145 ILE A 181 1 37 HELIX 8 AA8 SER A 183 MET A 205 1 23 HELIX 9 AA9 MET A 205 SER A 214 1 10 HELIX 10 AB1 SER A 222 LYS A 238 1 17 HELIX 11 AB2 ASN A 239 TRP A 250 1 12 HELIX 12 AB3 GLY B 12 ASN B 18 1 7 HELIX 13 AB4 ASN B 18 GLU B 23 1 6 HELIX 14 AB5 LEU B 29 ARG B 53 1 25 HELIX 15 AB6 TRP B 59 THR B 77 1 19 HELIX 16 AB7 TRP B 92 ASN B 111 1 20 HELIX 17 AB8 LEU B 122 SER B 141 1 20 HELIX 18 AB9 ASP B 145 ILE B 181 1 37 HELIX 19 AC1 SER B 183 MET B 205 1 23 HELIX 20 AC2 MET B 205 SER B 214 1 10 HELIX 21 AC3 SER B 222 LYS B 238 1 17 HELIX 22 AC4 ASN B 239 TRP B 250 1 12 HELIX 23 AC5 GLY C 12 ASN C 18 1 7 HELIX 24 AC6 ASN C 18 LYS C 24 1 7 HELIX 25 AC7 LEU C 29 ARG C 53 1 25 HELIX 26 AC8 TRP C 59 THR C 77 1 19 HELIX 27 AC9 TRP C 92 ASN C 111 1 20 HELIX 28 AD1 LEU C 122 SER C 141 1 20 HELIX 29 AD2 ASP C 145 ILE C 181 1 37 HELIX 30 AD3 SER C 183 MET C 205 1 23 HELIX 31 AD4 MET C 205 SER C 214 1 10 HELIX 32 AD5 SER C 222 LYS C 238 1 17 HELIX 33 AD6 ASN C 239 TRP C 250 1 12 HELIX 34 AD7 GLY D 12 ASN D 18 1 7 HELIX 35 AD8 ASN D 18 GLU D 23 1 6 HELIX 36 AD9 LEU D 29 ARG D 53 1 25 HELIX 37 AE1 TRP D 59 THR D 77 1 19 HELIX 38 AE2 TRP D 92 ASN D 111 1 20 HELIX 39 AE3 LEU D 122 SER D 141 1 20 HELIX 40 AE4 ASP D 145 ILE D 181 1 37 HELIX 41 AE5 SER D 183 MET D 205 1 23 HELIX 42 AE6 MET D 205 SER D 214 1 10 HELIX 43 AE7 SER D 222 LYS D 238 1 17 HELIX 44 AE8 ASN D 239 TRP D 250 1 12 SHEET 1 AA1 2 TYR A 81 ARG A 83 0 SHEET 2 AA1 2 TYR A 89 PRO A 91 -1 O LEU A 90 N ILE A 82 SHEET 1 AA2 2 LYS A 116 TYR A 117 0 SHEET 2 AA2 2 ILE A 120 PRO A 121 -1 O ILE A 120 N TYR A 117 SHEET 1 AA3 2 TYR B 81 ARG B 83 0 SHEET 2 AA3 2 TYR B 89 PRO B 91 -1 O LEU B 90 N ILE B 82 SHEET 1 AA4 2 LYS B 116 TYR B 117 0 SHEET 2 AA4 2 ILE B 120 PRO B 121 -1 O ILE B 120 N TYR B 117 SHEET 1 AA5 2 TYR C 81 ARG C 83 0 SHEET 2 AA5 2 TYR C 89 PRO C 91 -1 O LEU C 90 N ILE C 82 SHEET 1 AA6 2 LYS C 116 TYR C 117 0 SHEET 2 AA6 2 ILE C 120 PRO C 121 -1 O ILE C 120 N TYR C 117 SHEET 1 AA7 2 TYR D 81 ARG D 83 0 SHEET 2 AA7 2 TYR D 89 PRO D 91 -1 O LEU D 90 N ILE D 82 SHEET 1 AA8 2 LYS D 116 TYR D 117 0 SHEET 2 AA8 2 ILE D 120 PRO D 121 -1 O ILE D 120 N TYR D 117 SSBOND 1 CYS A 6 CYS B 6 1555 1555 2.03 SSBOND 2 CYS A 21 CYS A 219 1555 1555 2.03 SSBOND 3 CYS B 21 CYS B 219 1555 1555 2.03 SSBOND 4 CYS C 6 CYS D 6 1555 1555 2.03 SSBOND 5 CYS C 21 CYS C 219 1555 1555 2.03 SSBOND 6 CYS D 21 CYS D 219 1555 1555 2.03 LINK NZ LYS A 238 C15 RET A 401 1555 1555 1.47 LINK NZ LYS B 238 C15 RET B 401 1555 1555 1.47 LINK NZ LYS C 238 C15 RET C 401 1555 1555 1.47 LINK NZ LYS D 238 C15 RET D 401 1555 1555 1.47 SITE 1 AC1 13 TRP A 98 CYS A 102 MET A 105 CYS A 133 SITE 2 AC1 13 SER A 156 PHE A 160 TRP A 204 TYR A 207 SITE 3 AC1 13 PRO A 208 TRP A 211 ASP A 234 CYS A 237 SITE 4 AC1 13 LYS A 238 SITE 1 AC2 7 PHE A 48 THR A 52 ARG A 53 VAL B 42 SITE 2 AC2 7 GLN B 46 PHE B 49 ALA B 247 SITE 1 AC3 7 THR A 67 LEU A 74 GLY A 80 TRP A 92 SITE 2 AC3 7 ILE B 132 THR B 139 TYR B 152 SITE 1 AC4 9 ILE A 132 VAL A 135 THR A 139 TYR A 152 SITE 2 AC4 9 TYR B 63 THR B 67 GLY B 80 ILE B 82 SITE 3 AC4 9 SER B 97 SITE 1 AC5 3 TYR C 152 THR D 67 TRP D 92 SITE 1 AC6 5 TYR C 63 TRP C 92 ILE D 132 THR D 139 SITE 2 AC6 5 TYR D 152 SITE 1 AC7 16 GLU B 68 TRP B 98 THR B 101 CYS B 102 SITE 2 AC7 16 MET B 105 CYS B 133 GLY B 137 SER B 156 SITE 3 AC7 16 PHE B 160 TYR B 207 PRO B 208 TRP B 211 SITE 4 AC7 16 ASP B 234 LEU B 236 CYS B 237 ASN B 239 SITE 1 AC8 15 GLU C 68 TRP C 98 THR C 101 CYS C 102 SITE 2 AC8 15 MET C 105 CYS C 133 SER C 156 PHE C 160 SITE 3 AC8 15 TYR C 207 PRO C 208 TRP C 211 ASP C 234 SITE 4 AC8 15 LEU C 236 CYS C 237 ASN C 239 SITE 1 AC9 15 TRP D 98 CYS D 102 MET D 105 CYS D 133 SITE 2 AC9 15 GLY D 137 SER D 156 PHE D 160 TYR D 207 SITE 3 AC9 15 PRO D 208 TRP D 211 ASP D 234 LEU D 236 SITE 4 AC9 15 CYS D 237 ASN D 239 GLY D 242 CRYST1 56.780 150.030 90.690 90.00 97.43 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017612 0.000000 0.002297 0.00000 SCALE2 0.000000 0.006665 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011120 0.00000