data_6CT1 # _entry.id 6CT1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6CT1 pdb_00006ct1 10.2210/pdb6ct1/pdb WWPDB D_1000233340 ? ? BMRB 30441 ? 10.13018/BMR30441 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-09-25 2 'Structure model' 1 1 2019-10-09 3 'Structure model' 1 2 2020-01-01 4 'Structure model' 1 3 2022-09-07 5 'Structure model' 1 4 2023-06-14 6 'Structure model' 1 5 2024-05-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Structure summary' 4 3 'Structure model' 'Author supporting evidence' 5 4 'Structure model' 'Database references' 6 5 'Structure model' Other 7 6 'Structure model' 'Data collection' 8 6 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' audit_author 2 2 'Structure model' citation_author 3 3 'Structure model' pdbx_audit_support 4 4 'Structure model' citation 5 4 'Structure model' citation_author 6 4 'Structure model' database_2 7 5 'Structure model' pdbx_database_status 8 6 'Structure model' chem_comp_atom 9 6 'Structure model' chem_comp_bond 10 6 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation_author.name' 2 3 'Structure model' '_pdbx_audit_support.funding_organization' 3 4 'Structure model' '_citation.country' 4 4 'Structure model' '_citation.journal_abbrev' 5 4 'Structure model' '_citation.journal_id_CSD' 6 4 'Structure model' '_citation.journal_id_ISSN' 7 4 'Structure model' '_citation.journal_volume' 8 4 'Structure model' '_citation.page_first' 9 4 'Structure model' '_citation.page_last' 10 4 'Structure model' '_citation.pdbx_database_id_DOI' 11 4 'Structure model' '_citation.title' 12 4 'Structure model' '_citation.year' 13 4 'Structure model' '_database_2.pdbx_DOI' 14 4 'Structure model' '_database_2.pdbx_database_accession' 15 5 'Structure model' '_pdbx_database_status.status_code_nmr_data' 16 6 'Structure model' '_database_2.pdbx_DOI' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6CT1 _pdbx_database_status.recvd_initial_deposition_date 2018-03-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'TFE-induced NMR structure of a novel bioactive peptide (PaDBS1R2) derived from a Pyrobaculum aerophilum ribosomal protein (L39e)' 6CSK unspecified PDB 'TFE-induced NMR structure of a novel bioactive peptide (PaDBS1R3) derived from a Pyrobaculum aerophilum ribosomal protein (L39e)' 6CSZ unspecified BMRB 'TFE-induced NMR structure of a novel bioactive peptide (PaDBS1R7) derived from a Pyrobaculum aerophilum ribosomal protein (L39e)' 30441 unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Cardoso, M.H.' 1 0000-0001-6676-5362 'Chan, L.Y.' 2 0000-0002-9346-2487 'Candido, E.S.' 3 0000-0002-3126-029X 'Torres, M.T.' 4 ? 'Oshiro, K.G.N.' 5 ? 'Silva, I.C.' 6 ? 'Goncalves, S.' 7 ? 'Buccini, D.F.' 8 ? 'Lu, T.' 9 ? 'Santos, N.C.' 10 ? 'de la Fuente-Nunez, C.' 11 ? 'Craik, D.J.' 12 0000-0003-0007-6796 'Franco, O.L.' 13 0000-0001-9546-0525 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Chem Sci' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-6539 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 13 _citation.language ? _citation.page_first 9410 _citation.page_last 9424 _citation.title 'An N-capping asparagine-lysine-proline (NKP) motif contributes to a hybrid flexible/stable multifunctional peptide scaffold' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1039/D1SC06998E _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cardoso, M.H.' 1 ? primary 'Chan, L.Y.' 2 ? primary 'Candido, E.S.' 3 ? primary 'Buccini, D.F.' 4 ? primary 'Rezende, S.B.' 5 ? primary 'Torres, M.D.T.' 6 ? primary 'Oshiro, K.G.N.' 7 ? primary 'Silva, I.C.' 8 ? primary 'Goncalves, S.' 9 ? primary 'Lu, T.K.' 10 ? primary 'Santos, N.C.' 11 ? primary 'de la Fuente-Nunez, C.' 12 ? primary 'Craik, D.J.' 13 ? primary 'Franco, O.L.' 14 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description PaDBS1R7 _entity.formula_weight 2272.948 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation 'synthetic construct' _entity.pdbx_fragment 'UNP residues 1-18' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name '50S ribosomal protein L39e' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code PMARNKPKILKRILAKIFK _entity_poly.pdbx_seq_one_letter_code_can PMARNKPKILKRILAKIFK _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 MET n 1 3 ALA n 1 4 ARG n 1 5 ASN n 1 6 LYS n 1 7 PRO n 1 8 LYS n 1 9 ILE n 1 10 LEU n 1 11 LYS n 1 12 ARG n 1 13 ILE n 1 14 LEU n 1 15 ALA n 1 16 LYS n 1 17 ILE n 1 18 PHE n 1 19 LYS n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 19 _pdbx_entity_src_syn.organism_scientific 'Pyrobaculum aerophilum' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 178306 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 1 1 PRO PRO A . n A 1 2 MET 2 2 2 MET MET A . n A 1 3 ALA 3 3 3 ALA ALA A . n A 1 4 ARG 4 4 4 ARG ARG A . n A 1 5 ASN 5 5 5 ASN ASN A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 PRO 7 7 7 PRO PRO A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 ARG 12 12 12 ARG ARG A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 PHE 18 18 18 PHE PHE A . n A 1 19 LYS 19 19 19 LYS LYS A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6CT1 _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6CT1 _struct.title 'TFE-induced NMR structure of a novel bioactive peptide (PaDBS1R7) derived from a Pyrobaculum aerophilum ribosomal protein (L39e)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6CT1 _struct_keywords.text 'Antimicrobial Peptide, Antibiotics, Bacterial Resistance, Cationic Peptide, ANTIMICROBIAL PROTEIN' _struct_keywords.pdbx_keywords 'ANTIMICROBIAL PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RL39_PYRAE _struct_ref.pdbx_db_accession Q8ZTX6 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MARNKPLGKKLRLAAAFK _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6CT1 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 19 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8ZTX6 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 18 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 19 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6CT1 PRO A 1 ? UNP Q8ZTX6 ? ? insertion 1 1 1 6CT1 LYS A 8 ? UNP Q8ZTX6 LEU 7 'engineered mutation' 8 2 1 6CT1 ILE A 9 ? UNP Q8ZTX6 GLY 8 'engineered mutation' 9 3 1 6CT1 LEU A 10 ? UNP Q8ZTX6 LYS 9 'engineered mutation' 10 4 1 6CT1 ARG A 12 ? UNP Q8ZTX6 LEU 11 'engineered mutation' 12 5 1 6CT1 ILE A 13 ? UNP Q8ZTX6 ARG 12 'engineered mutation' 13 6 1 6CT1 LYS A 16 ? UNP Q8ZTX6 ALA 15 'engineered mutation' 16 7 1 6CT1 ILE A 17 ? UNP Q8ZTX6 ALA 16 'engineered mutation' 17 8 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 2340 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id LYS _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 6 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id PHE _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 18 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id LYS _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 6 _struct_conf.end_auth_comp_id PHE _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 18 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 3 ? ? -132.54 -47.79 2 3 ALA A 3 ? ? -154.01 -157.44 3 6 ARG A 4 ? ? -81.31 -74.76 4 7 ALA A 3 ? ? 67.55 114.51 5 10 ARG A 4 ? ? 56.94 95.74 # _pdbx_nmr_ensemble.entry_id 6CT1 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 6CT1 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1 mM na PaDBS1R7, 30 % na TFE, 60 % na H2O, 10 % na D2O, 10 % na DSS, trifluoroethanol/water' _pdbx_nmr_sample_details.solvent_system trifluoroethanol/water _pdbx_nmr_sample_details.label PaDBS1R7 _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details 'Synthetic peptide in water/TFE mixture' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 PaDBS1R7 1 ? mM na 1 TFE 30 ? % na 1 H2O 60 ? % na 1 D2O 10 ? % na 1 DSS 10 ? % na # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 4.3 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0 _pdbx_nmr_exptl_sample_conditions.details 'Synthetic peptide in water/TFE mixture' _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units 'Not defined' _pdbx_nmr_exptl_sample_conditions.label PaDBS1R7_TFE _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H TOCSY' 1 anisotropic 2 1 1 '2D 1H-1H NOESY' 1 anisotropic 3 1 1 '2D 1H-15N HSQC' 1 anisotropic 4 1 1 '2D 1H-13C HSQC' 1 anisotropic # _pdbx_nmr_refine.entry_id 6CT1 _pdbx_nmr_refine.method 'molecular dynamics' _pdbx_nmr_refine.details 'with simulated annealing; refinement in water' _pdbx_nmr_refine.software_ordinal 6 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 'chemical shift assignment' CcpNMR ? CCPN 2 'peak picking' CcpNMR ? CCPN 3 'geometry optimization' TALOS ? 'Cornilescu, Delaglio and Bax' 4 'data analysis' CYANA ? 'Guntert, Mumenthaler and Wuthrich' 5 'structure calculation' CNS ? 'Brunger, Adams, Clore, Gros, Nilges and Read' 6 refinement CNS ? 'Brunger, Adams, Clore, Gros, Nilges and Read' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 GLY N N N N 58 GLY CA C N N 59 GLY C C N N 60 GLY O O N N 61 GLY OXT O N N 62 GLY H H N N 63 GLY H2 H N N 64 GLY HA2 H N N 65 GLY HA3 H N N 66 GLY HXT H N N 67 ILE N N N N 68 ILE CA C N S 69 ILE C C N N 70 ILE O O N N 71 ILE CB C N S 72 ILE CG1 C N N 73 ILE CG2 C N N 74 ILE CD1 C N N 75 ILE OXT O N N 76 ILE H H N N 77 ILE H2 H N N 78 ILE HA H N N 79 ILE HB H N N 80 ILE HG12 H N N 81 ILE HG13 H N N 82 ILE HG21 H N N 83 ILE HG22 H N N 84 ILE HG23 H N N 85 ILE HD11 H N N 86 ILE HD12 H N N 87 ILE HD13 H N N 88 ILE HXT H N N 89 LEU N N N N 90 LEU CA C N S 91 LEU C C N N 92 LEU O O N N 93 LEU CB C N N 94 LEU CG C N N 95 LEU CD1 C N N 96 LEU CD2 C N N 97 LEU OXT O N N 98 LEU H H N N 99 LEU H2 H N N 100 LEU HA H N N 101 LEU HB2 H N N 102 LEU HB3 H N N 103 LEU HG H N N 104 LEU HD11 H N N 105 LEU HD12 H N N 106 LEU HD13 H N N 107 LEU HD21 H N N 108 LEU HD22 H N N 109 LEU HD23 H N N 110 LEU HXT H N N 111 LYS N N N N 112 LYS CA C N S 113 LYS C C N N 114 LYS O O N N 115 LYS CB C N N 116 LYS CG C N N 117 LYS CD C N N 118 LYS CE C N N 119 LYS NZ N N N 120 LYS OXT O N N 121 LYS H H N N 122 LYS H2 H N N 123 LYS HA H N N 124 LYS HB2 H N N 125 LYS HB3 H N N 126 LYS HG2 H N N 127 LYS HG3 H N N 128 LYS HD2 H N N 129 LYS HD3 H N N 130 LYS HE2 H N N 131 LYS HE3 H N N 132 LYS HZ1 H N N 133 LYS HZ2 H N N 134 LYS HZ3 H N N 135 LYS HXT H N N 136 MET N N N N 137 MET CA C N S 138 MET C C N N 139 MET O O N N 140 MET CB C N N 141 MET CG C N N 142 MET SD S N N 143 MET CE C N N 144 MET OXT O N N 145 MET H H N N 146 MET H2 H N N 147 MET HA H N N 148 MET HB2 H N N 149 MET HB3 H N N 150 MET HG2 H N N 151 MET HG3 H N N 152 MET HE1 H N N 153 MET HE2 H N N 154 MET HE3 H N N 155 MET HXT H N N 156 PHE N N N N 157 PHE CA C N S 158 PHE C C N N 159 PHE O O N N 160 PHE CB C N N 161 PHE CG C Y N 162 PHE CD1 C Y N 163 PHE CD2 C Y N 164 PHE CE1 C Y N 165 PHE CE2 C Y N 166 PHE CZ C Y N 167 PHE OXT O N N 168 PHE H H N N 169 PHE H2 H N N 170 PHE HA H N N 171 PHE HB2 H N N 172 PHE HB3 H N N 173 PHE HD1 H N N 174 PHE HD2 H N N 175 PHE HE1 H N N 176 PHE HE2 H N N 177 PHE HZ H N N 178 PHE HXT H N N 179 PRO N N N N 180 PRO CA C N S 181 PRO C C N N 182 PRO O O N N 183 PRO CB C N N 184 PRO CG C N N 185 PRO CD C N N 186 PRO OXT O N N 187 PRO H H N N 188 PRO HA H N N 189 PRO HB2 H N N 190 PRO HB3 H N N 191 PRO HG2 H N N 192 PRO HG3 H N N 193 PRO HD2 H N N 194 PRO HD3 H N N 195 PRO HXT H N N 196 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 GLY N CA sing N N 55 GLY N H sing N N 56 GLY N H2 sing N N 57 GLY CA C sing N N 58 GLY CA HA2 sing N N 59 GLY CA HA3 sing N N 60 GLY C O doub N N 61 GLY C OXT sing N N 62 GLY OXT HXT sing N N 63 ILE N CA sing N N 64 ILE N H sing N N 65 ILE N H2 sing N N 66 ILE CA C sing N N 67 ILE CA CB sing N N 68 ILE CA HA sing N N 69 ILE C O doub N N 70 ILE C OXT sing N N 71 ILE CB CG1 sing N N 72 ILE CB CG2 sing N N 73 ILE CB HB sing N N 74 ILE CG1 CD1 sing N N 75 ILE CG1 HG12 sing N N 76 ILE CG1 HG13 sing N N 77 ILE CG2 HG21 sing N N 78 ILE CG2 HG22 sing N N 79 ILE CG2 HG23 sing N N 80 ILE CD1 HD11 sing N N 81 ILE CD1 HD12 sing N N 82 ILE CD1 HD13 sing N N 83 ILE OXT HXT sing N N 84 LEU N CA sing N N 85 LEU N H sing N N 86 LEU N H2 sing N N 87 LEU CA C sing N N 88 LEU CA CB sing N N 89 LEU CA HA sing N N 90 LEU C O doub N N 91 LEU C OXT sing N N 92 LEU CB CG sing N N 93 LEU CB HB2 sing N N 94 LEU CB HB3 sing N N 95 LEU CG CD1 sing N N 96 LEU CG CD2 sing N N 97 LEU CG HG sing N N 98 LEU CD1 HD11 sing N N 99 LEU CD1 HD12 sing N N 100 LEU CD1 HD13 sing N N 101 LEU CD2 HD21 sing N N 102 LEU CD2 HD22 sing N N 103 LEU CD2 HD23 sing N N 104 LEU OXT HXT sing N N 105 LYS N CA sing N N 106 LYS N H sing N N 107 LYS N H2 sing N N 108 LYS CA C sing N N 109 LYS CA CB sing N N 110 LYS CA HA sing N N 111 LYS C O doub N N 112 LYS C OXT sing N N 113 LYS CB CG sing N N 114 LYS CB HB2 sing N N 115 LYS CB HB3 sing N N 116 LYS CG CD sing N N 117 LYS CG HG2 sing N N 118 LYS CG HG3 sing N N 119 LYS CD CE sing N N 120 LYS CD HD2 sing N N 121 LYS CD HD3 sing N N 122 LYS CE NZ sing N N 123 LYS CE HE2 sing N N 124 LYS CE HE3 sing N N 125 LYS NZ HZ1 sing N N 126 LYS NZ HZ2 sing N N 127 LYS NZ HZ3 sing N N 128 LYS OXT HXT sing N N 129 MET N CA sing N N 130 MET N H sing N N 131 MET N H2 sing N N 132 MET CA C sing N N 133 MET CA CB sing N N 134 MET CA HA sing N N 135 MET C O doub N N 136 MET C OXT sing N N 137 MET CB CG sing N N 138 MET CB HB2 sing N N 139 MET CB HB3 sing N N 140 MET CG SD sing N N 141 MET CG HG2 sing N N 142 MET CG HG3 sing N N 143 MET SD CE sing N N 144 MET CE HE1 sing N N 145 MET CE HE2 sing N N 146 MET CE HE3 sing N N 147 MET OXT HXT sing N N 148 PHE N CA sing N N 149 PHE N H sing N N 150 PHE N H2 sing N N 151 PHE CA C sing N N 152 PHE CA CB sing N N 153 PHE CA HA sing N N 154 PHE C O doub N N 155 PHE C OXT sing N N 156 PHE CB CG sing N N 157 PHE CB HB2 sing N N 158 PHE CB HB3 sing N N 159 PHE CG CD1 doub Y N 160 PHE CG CD2 sing Y N 161 PHE CD1 CE1 sing Y N 162 PHE CD1 HD1 sing N N 163 PHE CD2 CE2 doub Y N 164 PHE CD2 HD2 sing N N 165 PHE CE1 CZ doub Y N 166 PHE CE1 HE1 sing N N 167 PHE CE2 CZ sing Y N 168 PHE CE2 HE2 sing N N 169 PHE CZ HZ sing N N 170 PHE OXT HXT sing N N 171 PRO N CA sing N N 172 PRO N CD sing N N 173 PRO N H sing N N 174 PRO CA C sing N N 175 PRO CA CB sing N N 176 PRO CA HA sing N N 177 PRO C O doub N N 178 PRO C OXT sing N N 179 PRO CB CG sing N N 180 PRO CB HB2 sing N N 181 PRO CB HB3 sing N N 182 PRO CG CD sing N N 183 PRO CG HG2 sing N N 184 PRO CG HG3 sing N N 185 PRO CD HD2 sing N N 186 PRO CD HD3 sing N N 187 PRO OXT HXT sing N N 188 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Australian Research Council (ARC)' Australia FL150100146 1 'Brazilian National Council for Scientific and Technological Development (CNPq)' Brazil 141518/2015-4 2 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.details ? # _atom_sites.entry_id 6CT1 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_