HEADER HYDROLASE/HYDROLASE INHIBITOR 29-MAR-18 6CVX TITLE CRYSTAL STRUCTURE OF HCV NS3/4A WT PROTEASE IN COMPLEX WITH AJ-50 (MK- TITLE 2 5172 LINEAR ANALOGUE) COMPND MOL_ID: 1; COMPND 2 MOLECULE: NS3 PROTEASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HEPACIVIRUS C; SOURCE 3 ORGANISM_TAXID: 11103; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET-28A KEYWDS NS3/4A PROTEASE, HEPATITIS C VIRUS, DRUG RESISTANCE, PROTEASE KEYWDS 2 INHIBITOR, HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.N.MATTHEW,C.A.SCHIFFER REVDAT 3 04-OCT-23 6CVX 1 REMARK REVDAT 2 18-DEC-19 6CVX 1 REMARK REVDAT 1 08-AUG-18 6CVX 0 JRNL AUTH L.N.RUSERE,A.N.MATTHEW,G.J.LOCKBAUM,M.JAHANGIR,A.NEWTON, JRNL AUTH 2 C.J.PETROPOULOS,W.HUANG,N.KURT YILMAZ,C.A.SCHIFFER,A.ALI JRNL TITL QUINOXALINE-BASED LINEAR HCV NS3/4A PROTEASE INHIBITORS JRNL TITL 2 EXHIBIT POTENT ACTIVITY AGAINST DRUG RESISTANT VARIANTS. JRNL REF ACS MED CHEM LETT V. 9 691 2018 JRNL REFN ISSN 1948-5875 JRNL PMID 30034602 JRNL DOI 10.1021/ACSMEDCHEMLETT.8B00150 REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12-2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.30 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 19003 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.194 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 944 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.3023 - 3.4018 1.00 2748 142 0.1624 0.1722 REMARK 3 2 3.4018 - 2.7010 1.00 2627 137 0.1586 0.1691 REMARK 3 3 2.7010 - 2.3598 1.00 2592 138 0.1583 0.2127 REMARK 3 4 2.3598 - 2.1442 1.00 2565 143 0.1380 0.1930 REMARK 3 5 2.1442 - 1.9905 1.00 2571 130 0.1418 0.2299 REMARK 3 6 1.9905 - 1.8732 1.00 2562 132 0.1515 0.2144 REMARK 3 7 1.8732 - 1.7794 0.94 2394 122 0.1741 0.2409 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.420 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.019 1535 REMARK 3 ANGLE : 1.475 2102 REMARK 3 CHIRALITY : 0.088 244 REMARK 3 PLANARITY : 0.010 263 REMARK 3 DIHEDRAL : 16.132 889 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6CVX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1000233582. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-AUG-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-3000 703X REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19054 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.779 REMARK 200 RESOLUTION RANGE LOW (A) : 26.299 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.87 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5EQQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES BUFFER PH 6.5, 4% (W/V) REMARK 280 AMMONIUM SULFATE, 20-26% PEG-3350, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.64300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 29.89900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.25300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 29.89900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.64300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.25300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 1180 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A1013 CG CD OE1 OE2 REMARK 470 GLU A1014 CG CD OE1 OE2 REMARK 470 GLN A1017 CG CD OE1 NE2 REMARK 470 GLU A1018 CG CD OE1 OE2 REMARK 470 GLN A1021 CG CD OE1 NE2 REMARK 470 ARG A1024 CG CD NE CZ NH1 NH2 REMARK 470 LYS A1026 CG CD CE NZ REMARK 470 GLN A1028 CG CD OE1 NE2 REMARK 470 ARG A1092 CG CD NE CZ NH1 NH2 REMARK 470 ILE A1132 CG1 CG2 CD1 REMARK 470 LYS A1165 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE ARG A 1062 O HOH A 1301 1.20 REMARK 500 HE ARG A 1011 O HOH A 1306 1.58 REMARK 500 O HOH A 1462 O HOH A 1470 1.84 REMARK 500 O HOH A 1302 O HOH A 1387 1.89 REMARK 500 O HOH A 1410 O HOH A 1476 1.94 REMARK 500 O HOH A 1304 O HOH A 1454 1.95 REMARK 500 O HOH A 1456 O HOH A 1459 1.97 REMARK 500 NE ARG A 1062 O HOH A 1301 2.05 REMARK 500 O HOH A 1313 O HOH A 1458 2.06 REMARK 500 O HOH A 1445 O HOH A 1488 2.08 REMARK 500 O HOH A 1498 O HOH A 1508 2.09 REMARK 500 O HOH A 1453 O HOH A 1490 2.10 REMARK 500 O HOH A 1368 O HOH A 1458 2.10 REMARK 500 O HOH A 1318 O HOH A 1480 2.10 REMARK 500 O HOH A 1373 O HOH A 1389 2.13 REMARK 500 O HOH A 1390 O HOH A 1455 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1457 O HOH A 1467 3555 1.98 REMARK 500 O HOH A 1427 O HOH A 1440 4545 2.12 REMARK 500 O HOH A 1304 O HOH A 1451 4446 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A1101 CB SER A1101 OG 0.086 REMARK 500 CYS A1159 CB CYS A1159 SG -0.156 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A1062 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 ARG A1130 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A1038 -169.80 -108.77 REMARK 500 PHE A1043 -166.97 -161.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1204 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1097 SG REMARK 620 2 CYS A1099 SG 108.1 REMARK 620 3 CYS A1145 SG 111.3 117.9 REMARK 620 4 HIS A1149 ND1 122.9 96.4 100.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FH4 A 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 1204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 1205 DBREF1 6CVX A 1004 1180 UNP A0A0B4WYC6_9HEPC DBREF2 6CVX A A0A0B4WYC6 4 180 SEQADV 6CVX GLY A 980 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6CVX SER A 981 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6CVX HIS A 982 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6CVX MET A 983 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6CVX ALA A 984 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6CVX SER A 985 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6CVX MET A 986 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6CVX LYS A 987 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6CVX LYS A 988 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6CVX LYS A 989 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6CVX GLY A 990 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6CVX SER A 991 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6CVX VAL A 992 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6CVX VAL A 993 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6CVX ILE A 994 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6CVX VAL A 995 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6CVX GLY A 996 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6CVX ARG A 997 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6CVX ILE A 998 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6CVX ASN A 999 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6CVX LEU A 1000 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6CVX SER A 1001 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6CVX GLY A 1002 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6CVX ASP A 1003 UNP A0A0B4WYC EXPRESSION TAG SEQADV 6CVX GLU A 1013 UNP A0A0B4WYC LEU 13 CONFLICT SEQADV 6CVX GLU A 1014 UNP A0A0B4WYC LEU 14 CONFLICT SEQADV 6CVX GLN A 1017 UNP A0A0B4WYC ILE 17 CONFLICT SEQADV 6CVX GLU A 1018 UNP A0A0B4WYC ILE 18 CONFLICT SEQADV 6CVX GLN A 1021 UNP A0A0B4WYC LEU 21 CONFLICT SEQADV 6CVX SER A 1047 UNP A0A0B4WYC CYS 47 CONFLICT SEQADV 6CVX LEU A 1052 UNP A0A0B4WYC CYS 52 CONFLICT SEQADV 6CVX THR A 1072 UNP A0A0B4WYC ILE 72 CONFLICT SEQADV 6CVX GLN A 1086 UNP A0A0B4WYC PRO 86 CONFLICT SEQRES 1 A 201 GLY SER HIS MET ALA SER MET LYS LYS LYS GLY SER VAL SEQRES 2 A 201 VAL ILE VAL GLY ARG ILE ASN LEU SER GLY ASP THR ALA SEQRES 3 A 201 TYR ALA GLN GLN THR ARG GLY GLU GLU GLY CYS GLN GLU SEQRES 4 A 201 THR SER GLN THR GLY ARG ASP LYS ASN GLN VAL GLU GLY SEQRES 5 A 201 GLU VAL GLN ILE VAL SER THR ALA THR GLN THR PHE LEU SEQRES 6 A 201 ALA THR SER ILE ASN GLY VAL LEU TRP THR VAL TYR HIS SEQRES 7 A 201 GLY ALA GLY THR ARG THR ILE ALA SER PRO LYS GLY PRO SEQRES 8 A 201 VAL THR GLN MET TYR THR ASN VAL ASP LYS ASP LEU VAL SEQRES 9 A 201 GLY TRP GLN ALA PRO GLN GLY SER ARG SER LEU THR PRO SEQRES 10 A 201 CYS THR CYS GLY SER SER ASP LEU TYR LEU VAL THR ARG SEQRES 11 A 201 HIS ALA ASP VAL ILE PRO VAL ARG ARG ARG GLY ASP SER SEQRES 12 A 201 ARG GLY SER LEU LEU SER PRO ARG PRO ILE SER TYR LEU SEQRES 13 A 201 LYS GLY SER SER GLY GLY PRO LEU LEU CYS PRO ALA GLY SEQRES 14 A 201 HIS ALA VAL GLY ILE PHE ARG ALA ALA VAL CYS THR ARG SEQRES 15 A 201 GLY VAL ALA LYS ALA VAL ASP PHE ILE PRO VAL GLU SER SEQRES 16 A 201 LEU GLU THR THR MET ARG HET FH4 A1201 109 HET SO4 A1202 5 HET SO4 A1203 5 HET ZN A1204 1 HET GOL A1205 14 HETNAM FH4 N-[(CYCLOPENTYLOXY)CARBONYL]-3-METHYL-L-VALYL-(4R)-N- HETNAM 2 FH4 [(1R,2S)-2-ETHENYL-1-{[(1-METHYLCYCLOPROPYL) HETNAM 3 FH4 SULFONYL]CARBAMOYL}CYCLOPROPYL]-4-{[7-METHOXY-3- HETNAM 4 FH4 (PROPAN-2-YL)QUINOXALIN-2-YL]OXY}-L-PROLINAMIDE HETNAM SO4 SULFATE ION HETNAM ZN ZINC ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 FH4 C39 H54 N6 O9 S FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 ZN ZN 2+ FORMUL 6 GOL C3 H8 O3 FORMUL 7 HOH *214(H2 O) HELIX 1 AA1 HIS A 982 MET A 986 5 5 HELIX 2 AA2 GLY A 1012 GLY A 1023 1 12 HELIX 3 AA3 TYR A 1056 GLY A 1060 1 5 HELIX 4 AA4 VAL A 1078 LYS A 1080 5 3 HELIX 5 AA5 ILE A 1132 LYS A 1136 1 5 HELIX 6 AA6 VAL A 1172 MET A 1179 1 8 SHEET 1 AA1 7 TYR A1006 GLN A1009 0 SHEET 2 AA1 7 VAL A 993 ASN A 999 -1 N ASN A 999 O TYR A1006 SHEET 3 AA1 7 VAL A1033 SER A1037 -1 O ILE A1035 N VAL A 995 SHEET 4 AA1 7 THR A1042 ILE A1048 -1 O ALA A1045 N GLN A1034 SHEET 5 AA1 7 VAL A1051 VAL A1055 -1 O TRP A1053 N THR A1046 SHEET 6 AA1 7 LEU A1082 GLN A1086 -1 O TRP A1085 N LEU A1052 SHEET 7 AA1 7 TYR A1075 ASN A1077 -1 N ASN A1077 O LEU A1082 SHEET 1 AA2 7 ASP A1103 VAL A1107 0 SHEET 2 AA2 7 VAL A1113 ARG A1118 -1 O ILE A1114 N LEU A1106 SHEET 3 AA2 7 ARG A1123 PRO A1131 -1 O SER A1125 N ARG A1117 SHEET 4 AA2 7 VAL A1163 PRO A1171 -1 O ALA A1164 N ARG A1130 SHEET 5 AA2 7 ALA A1150 THR A1160 -1 N ALA A1156 O ASP A1168 SHEET 6 AA2 7 PRO A1142 LEU A1144 -1 N LEU A1143 O VAL A1151 SHEET 7 AA2 7 ASP A1103 VAL A1107 -1 N TYR A1105 O LEU A1144 LINK SG CYS A1097 ZN ZN A1204 1555 1555 2.30 LINK SG CYS A1099 ZN ZN A1204 1555 1555 2.34 LINK SG CYS A1145 ZN ZN A1204 1555 1555 2.31 LINK ND1 HIS A1149 ZN ZN A1204 1555 1555 2.11 SITE 1 AC1 26 HIS A 982 GLN A1041 PHE A1043 TYR A1056 SITE 2 AC1 26 HIS A1057 VAL A1078 ASP A1081 ARG A1123 SITE 3 AC1 26 LEU A1135 LYS A1136 GLY A1137 SER A1138 SITE 4 AC1 26 SER A1139 PHE A1154 ARG A1155 ALA A1156 SITE 5 AC1 26 ALA A1157 ASP A1168 SO4 A1202 HOH A1329 SITE 6 AC1 26 HOH A1354 HOH A1390 HOH A1395 HOH A1417 SITE 7 AC1 26 HOH A1426 HOH A1438 SITE 1 AC2 10 TYR A1006 GLN A1008 TYR A1056 FH4 A1201 SITE 2 AC2 10 HOH A1338 HOH A1362 HOH A1374 HOH A1385 SITE 3 AC2 10 HOH A1409 HOH A1412 SITE 1 AC3 7 ARG A1109 HIS A1110 HOH A1327 HOH A1355 SITE 2 AC3 7 HOH A1356 HOH A1405 HOH A1416 SITE 1 AC4 4 CYS A1097 CYS A1099 CYS A1145 HIS A1149 SITE 1 AC5 6 ASN A1049 GLY A1050 ASP A1121 SER A1122 SITE 2 AC5 6 HOH A1411 HOH A1435 CRYST1 55.286 58.506 59.798 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018088 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017092 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016723 0.00000