HEADER SUGAR BINDING PROTEIN 30-MAR-18 6CWF TITLE CRYSTAL STRUCTURE OF SPAA-SLH IN COMPLEX WITH 4,6-PYR-BETA-D-MANNACOME COMPND MOL_ID: 1; COMPND 2 MOLECULE: SURFACE (S-) LAYER GLYCOPROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: SLH DOMAINS (UNP RESIDUES 21-193); COMPND 5 SYNONYM: SPAA; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PAENIBACILLUS ALVEI; SOURCE 3 ORGANISM_COMMON: BACILLUS ALVEI; SOURCE 4 ORGANISM_TAXID: 44250; SOURCE 5 GENE: SPAA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-22B KEYWDS SURFACE LAYER HOMOLOGY DOMAIN, SECONDARY CELL WALL POLYMER, S-LAYER, KEYWDS 2 SLH, SCWP, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.J.BLACKLER,S.V.EVANS REVDAT 4 04-OCT-23 6CWF 1 REMARK REVDAT 3 08-JAN-20 6CWF 1 REMARK REVDAT 2 22-AUG-18 6CWF 1 JRNL REVDAT 1 15-AUG-18 6CWF 0 JRNL AUTH R.J.BLACKLER,A.LOPEZ-GUZMAN,F.F.HAGER,B.JANESCH,G.MARTINZ, JRNL AUTH 2 S.M.L.GAGNON,O.HAJI-GHASSEMI,P.KOSMA,P.MESSNER,C.SCHAFFER, JRNL AUTH 3 S.V.EVANS JRNL TITL STRUCTURAL BASIS OF CELL WALL ANCHORING BY SLH DOMAINS IN JRNL TITL 2 PAENIBACILLUS ALVEI. JRNL REF NAT COMMUN V. 9 3120 2018 JRNL REFN ESSN 2041-1723 JRNL PMID 30087354 JRNL DOI 10.1038/S41467-018-05471-3 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 17170 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 920 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.25 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.31 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1020 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.82 REMARK 3 BIN R VALUE (WORKING SET) : 0.2620 REMARK 3 BIN FREE R VALUE SET COUNT : 59 REMARK 3 BIN FREE R VALUE : 0.3610 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2540 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 90 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.11000 REMARK 3 B22 (A**2) : -0.11000 REMARK 3 B33 (A**2) : 0.35000 REMARK 3 B12 (A**2) : -0.05000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.314 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.231 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.206 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.504 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.934 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.905 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2630 ; 0.016 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2534 ; 0.006 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3546 ; 1.678 ; 1.972 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5860 ; 1.160 ; 3.008 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 328 ; 5.780 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 112 ;35.398 ;26.071 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 466 ;17.311 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 4 ;12.667 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 394 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2954 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 562 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1318 ; 0.986 ; 1.261 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1317 ; 0.987 ; 1.260 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1644 ; 1.689 ; 1.884 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 28 192 B 28 192 9645 0.110 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 8 A 172 REMARK 3 ORIGIN FOR THE GROUP (A): -29.5370 34.5021 21.6930 REMARK 3 T TENSOR REMARK 3 T11: 0.0357 T22: 0.2890 REMARK 3 T33: 0.1752 T12: -0.0101 REMARK 3 T13: 0.0289 T23: 0.1572 REMARK 3 L TENSOR REMARK 3 L11: 4.2508 L22: 1.9889 REMARK 3 L33: 2.8575 L12: 0.3922 REMARK 3 L13: -0.5554 L23: -0.3592 REMARK 3 S TENSOR REMARK 3 S11: -0.1457 S12: -0.0476 S13: 0.0728 REMARK 3 S21: 0.0171 S22: 0.1395 S23: 0.1012 REMARK 3 S31: -0.1620 S32: -0.0221 S33: 0.0062 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 8 B 172 REMARK 3 ORIGIN FOR THE GROUP (A): -23.1669 15.2751 1.0485 REMARK 3 T TENSOR REMARK 3 T11: 0.4447 T22: 0.1658 REMARK 3 T33: 0.1513 T12: -0.2301 REMARK 3 T13: 0.0111 T23: -0.0211 REMARK 3 L TENSOR REMARK 3 L11: 2.0668 L22: 4.8239 REMARK 3 L33: 5.4021 L12: 2.3762 REMARK 3 L13: 0.2379 L23: 0.1893 REMARK 3 S TENSOR REMARK 3 S11: 0.2065 S12: -0.1275 S13: -0.1092 REMARK 3 S21: 0.3428 S22: -0.1527 S23: -0.1767 REMARK 3 S31: 0.1648 S32: 0.3974 S33: -0.0538 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 6CWF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-APR-18. REMARK 100 THE DEPOSITION ID IS D_1000233610. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-002+ REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : OSMIC BLUE MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18478 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.400 REMARK 200 R MERGE (I) : 0.04700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.50 REMARK 200 R MERGE FOR SHELL (I) : 0.65300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 6CWC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM CALCIUM CHLORIDE DIHYDRATE, 0.1 REMARK 280 M BIS-TRIS, PH 6.5, 30% V/V PEG550 MME, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.71133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 41.85567 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 41.85567 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 83.71133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 21 REMARK 465 ALA A 22 REMARK 465 PHE A 23 REMARK 465 GLY A 24 REMARK 465 ALA A 25 REMARK 465 ASP A 26 REMARK 465 ALA A 27 REMARK 465 GLY A 193 REMARK 465 SER A 194 REMARK 465 GLY A 195 REMARK 465 SER A 196 REMARK 465 HIS A 197 REMARK 465 HIS A 198 REMARK 465 HIS A 199 REMARK 465 HIS A 200 REMARK 465 HIS A 201 REMARK 465 HIS A 202 REMARK 465 VAL B 21 REMARK 465 ALA B 22 REMARK 465 PHE B 23 REMARK 465 GLY B 24 REMARK 465 ALA B 25 REMARK 465 ASP B 26 REMARK 465 ALA B 27 REMARK 465 GLY B 193 REMARK 465 SER B 194 REMARK 465 GLY B 195 REMARK 465 SER B 196 REMARK 465 HIS B 197 REMARK 465 HIS B 198 REMARK 465 HIS B 199 REMARK 465 HIS B 200 REMARK 465 HIS B 201 REMARK 465 HIS B 202 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 182 O HOH B 301 2.08 REMARK 500 O LYS B 75 O HOH B 302 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 118 75.35 64.65 REMARK 500 TYR B 47 125.97 -39.23 REMARK 500 ASP B 58 -169.13 -108.92 REMARK 500 ASP B 118 75.31 63.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6LA A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6LA B 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6CWC RELATED DB: PDB REMARK 900 RELATED ID: 6CWH RELATED DB: PDB REMARK 900 RELATED ID: 6CWI RELATED DB: PDB REMARK 900 RELATED ID: 6CWL RELATED DB: PDB REMARK 900 RELATED ID: 6CWM RELATED DB: PDB REMARK 900 RELATED ID: 6CWN RELATED DB: PDB REMARK 900 RELATED ID: 6CWR RELATED DB: PDB DBREF 6CWF A 21 193 UNP C1JZ07 C1JZ07_PAEAL 21 193 DBREF 6CWF B 21 193 UNP C1JZ07 C1JZ07_PAEAL 21 193 SEQADV 6CWF SER A 194 UNP C1JZ07 EXPRESSION TAG SEQADV 6CWF GLY A 195 UNP C1JZ07 EXPRESSION TAG SEQADV 6CWF SER A 196 UNP C1JZ07 EXPRESSION TAG SEQADV 6CWF HIS A 197 UNP C1JZ07 EXPRESSION TAG SEQADV 6CWF HIS A 198 UNP C1JZ07 EXPRESSION TAG SEQADV 6CWF HIS A 199 UNP C1JZ07 EXPRESSION TAG SEQADV 6CWF HIS A 200 UNP C1JZ07 EXPRESSION TAG SEQADV 6CWF HIS A 201 UNP C1JZ07 EXPRESSION TAG SEQADV 6CWF HIS A 202 UNP C1JZ07 EXPRESSION TAG SEQADV 6CWF SER B 194 UNP C1JZ07 EXPRESSION TAG SEQADV 6CWF GLY B 195 UNP C1JZ07 EXPRESSION TAG SEQADV 6CWF SER B 196 UNP C1JZ07 EXPRESSION TAG SEQADV 6CWF HIS B 197 UNP C1JZ07 EXPRESSION TAG SEQADV 6CWF HIS B 198 UNP C1JZ07 EXPRESSION TAG SEQADV 6CWF HIS B 199 UNP C1JZ07 EXPRESSION TAG SEQADV 6CWF HIS B 200 UNP C1JZ07 EXPRESSION TAG SEQADV 6CWF HIS B 201 UNP C1JZ07 EXPRESSION TAG SEQADV 6CWF HIS B 202 UNP C1JZ07 EXPRESSION TAG SEQRES 1 A 182 VAL ALA PHE GLY ALA ASP ALA ALA LYS THR THR GLN GLU SEQRES 2 A 182 LYS PHE ASP ALA LEU LYS GLU ALA GLY VAL PHE SER GLY SEQRES 3 A 182 TYR PRO GLY THR THR ASP ALA LYS LEU GLY GLN ASP MET SEQRES 4 A 182 THR ARG ALA GLU PHE ALA LYS VAL LEU VAL LYS LEU PHE SEQRES 5 A 182 GLY LEU LYS GLU ILE HIS GLY GLN TYR SER TYR LYS ASP SEQRES 6 A 182 LYS ASN TYR ASP ALA LYS ASN TRP ALA ALA PRO PHE ILE SEQRES 7 A 182 GLU ALA VAL THR ALA GLU GLY LEU MET GLN GLY LYS ASP SEQRES 8 A 182 LEU THR LYS LYS ILE PHE ASP PHE ASN GLY LYS ILE THR SEQRES 9 A 182 VAL GLU GLU ALA SER LYS THR LEU VAL THR ALA LEU LYS SEQRES 10 A 182 LEU GLU PRO VAL LYS ASP ALA GLN ASN LYS ALA THR ASP SEQRES 11 A 182 TRP ALA LYS GLY TYR PHE GLU ALA ALA VAL ASN ALA GLY SEQRES 12 A 182 LEU PHE SER LYS ASP ALA ASN PRO LYS ALA ASN ALA THR SEQRES 13 A 182 ARG ALA GLN LEU VAL GLU ALA ALA PHE ALA ALA ASP GLU SEQRES 14 A 182 MET SER LYS GLY SER GLY SER HIS HIS HIS HIS HIS HIS SEQRES 1 B 182 VAL ALA PHE GLY ALA ASP ALA ALA LYS THR THR GLN GLU SEQRES 2 B 182 LYS PHE ASP ALA LEU LYS GLU ALA GLY VAL PHE SER GLY SEQRES 3 B 182 TYR PRO GLY THR THR ASP ALA LYS LEU GLY GLN ASP MET SEQRES 4 B 182 THR ARG ALA GLU PHE ALA LYS VAL LEU VAL LYS LEU PHE SEQRES 5 B 182 GLY LEU LYS GLU ILE HIS GLY GLN TYR SER TYR LYS ASP SEQRES 6 B 182 LYS ASN TYR ASP ALA LYS ASN TRP ALA ALA PRO PHE ILE SEQRES 7 B 182 GLU ALA VAL THR ALA GLU GLY LEU MET GLN GLY LYS ASP SEQRES 8 B 182 LEU THR LYS LYS ILE PHE ASP PHE ASN GLY LYS ILE THR SEQRES 9 B 182 VAL GLU GLU ALA SER LYS THR LEU VAL THR ALA LEU LYS SEQRES 10 B 182 LEU GLU PRO VAL LYS ASP ALA GLN ASN LYS ALA THR ASP SEQRES 11 B 182 TRP ALA LYS GLY TYR PHE GLU ALA ALA VAL ASN ALA GLY SEQRES 12 B 182 LEU PHE SER LYS ASP ALA ASN PRO LYS ALA ASN ALA THR SEQRES 13 B 182 ARG ALA GLN LEU VAL GLU ALA ALA PHE ALA ALA ASP GLU SEQRES 14 B 182 MET SER LYS GLY SER GLY SER HIS HIS HIS HIS HIS HIS HET 6LA A 201 21 HET 6LA B 201 21 HETNAM 6LA METHYL 2-(ACETYLAMINO)-4,6-O-[(1S)-1- HETNAM 2 6LA CARBOXYETHYLIDENE]-2-DEOXY-BETA-D-MANNOPYRANOSIDE FORMUL 3 6LA 2(C12 H19 N O8) FORMUL 5 HOH *90(H2 O) HELIX 1 AA1 THR A 30 ALA A 41 1 12 HELIX 2 AA2 THR A 60 GLY A 73 1 14 HELIX 3 AA3 ALA A 94 GLU A 104 1 11 HELIX 4 AA4 THR A 124 LEU A 136 1 13 HELIX 5 AA5 THR A 149 TRP A 151 5 3 HELIX 6 AA6 ALA A 152 ALA A 162 1 11 HELIX 7 AA7 THR A 176 LYS A 192 1 17 HELIX 8 AA8 THR B 30 ALA B 41 1 12 HELIX 9 AA9 THR B 60 GLY B 73 1 14 HELIX 10 AB1 ALA B 94 GLU B 104 1 11 HELIX 11 AB2 THR B 124 LYS B 137 1 14 HELIX 12 AB3 THR B 149 TRP B 151 5 3 HELIX 13 AB4 ALA B 152 ALA B 162 1 11 HELIX 14 AB5 THR B 176 LYS B 192 1 17 CISPEP 1 PRO B 48 GLY B 49 0 -10.48 SITE 1 AC1 10 ARG A 61 MET A 107 GLN A 108 GLY A 109 SITE 2 AC1 10 LYS A 110 LEU A 112 GLU A 127 LYS A 130 SITE 3 AC1 10 TRP A 151 HOH A 304 SITE 1 AC2 9 ARG B 61 MET B 107 GLN B 108 GLY B 109 SITE 2 AC2 9 LYS B 110 ASP B 111 GLU B 127 LYS B 130 SITE 3 AC2 9 HOH B 304 CRYST1 72.000 72.000 125.567 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013889 0.008019 0.000000 0.00000 SCALE2 0.000000 0.016038 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007964 0.00000