HEADER BIOSYNTHETIC PROTEIN 05-APR-18 6CY8 TITLE CRYSTAL STRUCTURE OF FAD-DEPENDENT DEHYDROGENASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BUTYRYL-COA DEHYDROGENASE; COMPND 3 CHAIN: B; COMPND 4 EC: 1.3.8.1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: ALPHA/BETA HYDROLASE FOLD PROTEIN; COMPND 8 CHAIN: A; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MARINOMONAS MEDITERRANEA (STRAIN ATCC 700492 / SOURCE 3 JCM 21426 / NBRC 103028 / MMB-1); SOURCE 4 ORGANISM_TAXID: 717774; SOURCE 5 STRAIN: ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1; SOURCE 6 GENE: MARME_4091; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: MARINOMONAS MEDITERRANEA (STRAIN ATCC 700492 / SOURCE 11 JCM 21426 / NBRC 103028 / MMB-1); SOURCE 12 ORGANISM_TAXID: 717774; SOURCE 13 STRAIN: ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1; SOURCE 14 GENE: MARME_4088; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ACYL CARRIER PROTEIN, FAD-DEPENDENT ENZYME, NATURAL PRODUCT KEYWDS 2 BIOSYNTHESIS, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR V.AGARWAL REVDAT 4 13-MAR-24 6CY8 1 REMARK REVDAT 3 18-DEC-19 6CY8 1 REMARK REVDAT 2 27-FEB-19 6CY8 1 JRNL REVDAT 1 16-JAN-19 6CY8 0 JRNL AUTH H.R.THAPA,J.M.ROBBINS,B.S.MOORE,V.AGARWAL JRNL TITL INSIGHTS INTO THIOTEMPLATED PYRROLE BIOSYNTHESIS GAINED FROM JRNL TITL 2 THE CRYSTAL STRUCTURE OF FLAVIN-DEPENDENT OXIDASE IN COMPLEX JRNL TITL 3 WITH CARRIER PROTEIN. JRNL REF BIOCHEMISTRY V. 58 918 2019 JRNL REFN ISSN 1520-4995 JRNL PMID 30620182 JRNL DOI 10.1021/ACS.BIOCHEM.8B01177 REMARK 2 REMARK 2 RESOLUTION. 2.73 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.73 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 3 NUMBER OF REFLECTIONS : 19799 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 985 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.1998 - 5.2181 0.92 2797 167 0.2067 0.2555 REMARK 3 2 5.2181 - 4.1429 0.95 2717 156 0.1638 0.1973 REMARK 3 3 4.1429 - 3.6195 0.96 2718 134 0.1770 0.2071 REMARK 3 4 3.6195 - 3.2887 0.96 2691 150 0.1907 0.2685 REMARK 3 5 3.2887 - 3.0531 0.97 2706 146 0.2017 0.2559 REMARK 3 6 3.0531 - 2.8731 0.97 2714 125 0.2201 0.2813 REMARK 3 7 2.8731 - 2.7293 0.88 2471 107 0.2065 0.2974 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.990 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3570 REMARK 3 ANGLE : 0.966 4851 REMARK 3 CHIRALITY : 0.055 537 REMARK 3 PLANARITY : 0.005 623 REMARK 3 DIHEDRAL : 4.890 2838 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6CY8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-APR-18. REMARK 100 THE DEPOSITION ID IS D_1000233688. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-NOV-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19969 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 45.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 200 DATA REDUNDANCY : 11.50 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.5200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.75 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 279K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.55700 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 157.11400 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 78.55700 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 157.11400 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 78.55700 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 157.11400 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 78.55700 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 157.11400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 32350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 59110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -240.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 52.18250 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 90.38274 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 314.22800 REMARK 350 BIOMT1 4 0.500000 -0.866025 0.000000 52.18250 REMARK 350 BIOMT2 4 -0.866025 -0.500000 0.000000 90.38274 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 314.22800 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER B 24 REMARK 465 ALA B 25 REMARK 465 PRO B 26 REMARK 465 LEU B 27 REMARK 465 GLN B 28 REMARK 465 GLU B 29 REMARK 465 ASP B 30 REMARK 465 ASN B 31 REMARK 465 GLY B 117 REMARK 465 ARG B 118 REMARK 465 MET A 1 REMARK 465 ILE A 2 REMARK 465 GLU A 3 REMARK 465 LYS A 4 REMARK 465 LEU A 5 REMARK 465 GLY A 16 REMARK 465 ALA A 17 REMARK 465 ALA A 18 REMARK 465 ASP A 19 REMARK 465 ASP A 20 REMARK 465 ASN A 74 REMARK 465 GLN A 75 REMARK 465 LEU A 76 REMARK 465 SER A 77 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 175 CG CD CE NZ REMARK 470 ARG B 205 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 348 CG CD NE CZ NH1 NH2 REMARK 470 SER A 35 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 560 O HOH B 585 2.00 REMARK 500 CB SER A 35 O23 PNS A 100 2.01 REMARK 500 OG SER B 294 O HOH B 501 2.06 REMARK 500 OD2 ASP B 287 O HOH B 502 2.09 REMARK 500 OE2 GLU B 72 O HOH B 503 2.12 REMARK 500 O HOH B 544 O HOH A 208 2.16 REMARK 500 OE1 GLN B 230 O HOH B 504 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 597 O HOH B 599 4565 1.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS B 94 -58.73 -124.84 REMARK 500 ILE B 125 -37.77 -132.70 REMARK 500 ASN B 173 88.81 -164.72 REMARK 500 ASN B 189 -7.32 98.87 REMARK 500 VAL B 349 -34.67 -136.99 REMARK 500 SER B 363 19.66 58.48 REMARK 500 ASP A 34 -164.12 -120.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD B 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PNS A 100 DBREF 6CY8 B 1 380 UNP F2K077 F2K077_MARM1 1 380 DBREF 6CY8 A 1 77 UNP F2K074 F2K074_MARM1 1 77 SEQRES 1 B 380 MET ASN PHE GLU TRP THR HIS GLU GLN ALA GLU LEU PHE SEQRES 2 B 380 GLU HIS ALA LEU ARG PHE GLY LYS GLU LEU SER ALA PRO SEQRES 3 B 380 LEU GLN GLU ASP ASN GLY PHE PRO ARG ASP ASN TRP ASN SEQRES 4 B 380 ALA LEU GLY ASP PHE GLY TYR PHE GLY LEU PRO ILE PRO SEQRES 5 B 380 GLU LYS TYR ALA LYS ASP GLY SER GLY PHE ASP ILE LEU SEQRES 6 B 380 THR THR ILE LYS ILE ILE GLU GLY LEU GLY GLN SER CYS SEQRES 7 B 380 THR ASP THR GLY LEU LEU PHE ALA GLY ALA ALA HIS THR SEQRES 8 B 380 PHE ALA CYS SER MET PRO ILE LEU GLU HIS GLY SER GLU SEQRES 9 B 380 THR LEU LYS HIS GLN LEU LEU PRO ASP LEU ALA THR GLY SEQRES 10 B 380 ARG LYS ILE ALA ALA ASN ALA ILE SER GLU ALA SER ALA SEQRES 11 B 380 GLY SER ASP ILE SER ASN LEU ALA THR THR ALA GLN LYS SEQRES 12 B 380 GLU GLY ASP TYR TYR VAL LEU ASN GLY GLY LYS SER TYR SEQRES 13 B 380 VAL THR ASN GLY SER ILE ALA ASP TYR TYR VAL VAL TYR SEQRES 14 B 380 ALA THR THR ASN LYS LYS HIS GLY TYR LEU GLY GLN THR SEQRES 15 B 380 ALA PHE VAL VAL PRO ARG ASN THR PRO GLY ILE SER VAL SEQRES 16 B 380 GLY ASN ASP TYR HIS LYS LEU GLY LEU ARG SER ALA PRO SEQRES 17 B 380 LEU ASN GLN VAL PHE PHE ASP ASN CYS THR ILE HIS LYS SEQRES 18 B 380 ASP TYR ALA LEU GLY ARG GLU GLY GLN GLY ALA ARG ILE SEQRES 19 B 380 PHE ALA ALA SER MET ASP TRP GLU ARG CYS CYS LEU PHE SEQRES 20 B 380 ALA ILE PHE VAL GLY ALA MET GLN ARG ASP LEU ASN GLN SEQRES 21 B 380 CYS ILE GLU TYR ALA ASN THR ARG MET GLN GLY ASP LYS SEQRES 22 B 380 THR ILE SER ARG PHE GLN ALA VAL SER HIS ARG ILE ALA SEQRES 23 B 380 ASP MET GLY VAL ARG LEU GLU SER ALA ARG LEU MET LEU SEQRES 24 B 380 TYR TYR ALA ALA TRP GLN LYS SER GLN ASP VAL ASP ASN SEQRES 25 B 380 THR LYS ALA VAL ALA MET SER LYS LEU ALA ILE SER GLU SEQRES 26 B 380 ALA PHE VAL GLN SER GLY ILE ASP SER ILE ARG VAL HIS SEQRES 27 B 380 GLY ALA LEU GLY TYR LEU ASP GLU GLY ARG VAL ASN ASN SEQRES 28 B 380 SER ILE LYS ASP ALA LEU GLY SER VAL LEU PHE SER GLY SEQRES 29 B 380 THR SER ASP ILE GLN ARG GLU LEU ILE CYS ASN ARG LEU SEQRES 30 B 380 GLY LEU LEU SEQRES 1 A 77 MET ILE GLU LYS LEU ILE HIS PHE ILE ASN ASN ASP LEU SEQRES 2 A 77 LEU GLU GLY ALA ALA ASP ASP LEU ASP GLN ASN THR PRO SEQRES 3 A 77 LEU LEU GLU LEU GLY ILE LEU ASP SER LEU SER MET VAL SEQRES 4 A 77 LEU LEU LEU ALA HIS ILE ASP GLN GLN TYR GLY VAL LYS SEQRES 5 A 77 ILE PRO GLU HIS GLU ILE ASN PRO GLU HIS PHE GLU ASN SEQRES 6 A 77 VAL ALA THR LEU ALA ALA LEU ILE ASN GLN LEU SER HET FAD B 400 53 HET PNS A 100 22 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM PNS 4'-PHOSPHOPANTETHEINE FORMUL 3 FAD C27 H33 N9 O15 P2 FORMUL 4 PNS C11 H23 N2 O7 P S FORMUL 5 HOH *109(H2 O) HELIX 1 AA1 THR B 6 GLY B 20 1 15 HELIX 2 AA2 LYS B 21 LEU B 23 5 3 HELIX 3 AA3 PRO B 34 GLY B 45 1 12 HELIX 4 AA4 TYR B 46 LEU B 49 5 4 HELIX 5 AA5 ASP B 63 CYS B 78 1 16 HELIX 6 AA6 ASP B 80 CYS B 94 1 15 HELIX 7 AA7 CYS B 94 GLY B 102 1 9 HELIX 8 AA8 SER B 103 ALA B 115 1 13 HELIX 9 AA9 ASN B 173 LEU B 179 5 7 HELIX 10 AB1 GLN B 230 LEU B 246 1 17 HELIX 11 AB2 PHE B 247 ARG B 268 1 22 HELIX 12 AB3 THR B 274 ARG B 277 5 4 HELIX 13 AB4 PHE B 278 SER B 307 1 30 HELIX 14 AB5 ASN B 312 GLY B 339 1 28 HELIX 15 AB6 GLY B 339 LEU B 344 1 6 HELIX 16 AB7 ASN B 350 VAL B 360 1 11 HELIX 17 AB8 THR B 365 GLY B 378 1 14 HELIX 18 AB9 HIS A 7 ASP A 12 1 6 HELIX 19 AC1 ASP A 34 GLY A 50 1 17 HELIX 20 AC2 PRO A 54 ILE A 58 5 5 HELIX 21 AC3 ASN A 65 ILE A 73 1 9 SHEET 1 AA1 4 ALA B 121 ALA B 124 0 SHEET 2 AA1 4 TYR B 165 THR B 171 1 O VAL B 167 N ALA B 122 SHEET 3 AA1 4 GLN B 181 PRO B 187 -1 O VAL B 186 N TYR B 166 SHEET 4 AA1 4 ALA B 224 LEU B 225 -1 O LEU B 225 N ALA B 183 SHEET 1 AA2 4 THR B 140 GLU B 144 0 SHEET 2 AA2 4 TYR B 147 THR B 158 -1 O TYR B 147 N GLU B 144 SHEET 3 AA2 4 LEU B 209 HIS B 220 -1 O VAL B 212 N LYS B 154 SHEET 4 AA2 4 ILE B 193 VAL B 195 -1 N SER B 194 O PHE B 213 SITE 1 AC1 27 PNS A 100 ASN B 123 ILE B 125 SER B 126 SITE 2 AC1 27 GLY B 131 SER B 132 TYR B 156 THR B 158 SITE 3 AC1 27 LEU B 209 ARG B 268 GLN B 270 PHE B 278 SITE 4 AC1 27 GLN B 279 VAL B 281 ARG B 284 ARG B 336 SITE 5 AC1 27 VAL B 337 GLY B 339 ALA B 340 PHE B 362 SITE 6 AC1 27 THR B 365 ASP B 367 ILE B 368 HOH B 518 SITE 7 AC1 27 HOH B 526 HOH B 543 HOH B 571 SITE 1 AC2 14 SER A 35 HOH A 206 HOH A 208 GLY B 131 SITE 2 AC2 14 SER B 132 PHE B 235 ALA B 236 MET B 239 SITE 3 AC2 14 ARG B 243 SER B 363 GLY B 364 FAD B 400 SITE 4 AC2 14 HOH B 528 HOH B 553 CRYST1 104.365 104.365 235.671 90.00 90.00 120.00 P 64 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009582 0.005532 0.000000 0.00000 SCALE2 0.000000 0.011064 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004243 0.00000