HEADER PROTEIN BINDING 10-APR-18 6D0S TITLE RABGAP DOMAIN OF HUMAN TBC1D22B COMPND MOL_ID: 1; COMPND 2 MOLECULE: TBC1 DOMAIN FAMILY MEMBER 22B; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RABGAP DOMAIN (UNP RESIDUES 178-505); COMPND 5 SYNONYM: TBC1D22B; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TBC1D22B, C6ORF197; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28-MHL (GI:134105571) KEYWDS RAB-GAP, GTPASE ACTIVATOR, TBC1, STRUCTURAL GENOMICS, STRUCTURAL KEYWDS 2 GENOMICS CONSORTIUM, SGC, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR Y.TONG,W.TEMPEL,C.H.ARROWSMITH,A.M.EDWARDS,C.BOUNTRA,H.PARK, AUTHOR 2 STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 2 04-OCT-23 6D0S 1 REMARK REVDAT 1 06-JUN-18 6D0S 0 SPRSDE 06-JUN-18 6D0S 3DZX JRNL AUTH Y.TONG,W.TEMPEL,C.H.ARROWSMITH,A.M.EDWARDS,C.BOUNTRA,H.PARK JRNL TITL RABGAP DOMAIN OF HUMAN TBC1D22B JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.38 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 18259 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 930 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.000 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 9 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.44 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.55 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2860 REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2698 REMARK 3 BIN R VALUE (WORKING SET) : 0.2000 REMARK 3 BIN FREE R VALUE : 0.2000 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.66 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 162 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2252 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 60.91 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 67.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.27510 REMARK 3 B22 (A**2) : -2.27510 REMARK 3 B33 (A**2) : 4.55020 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.310 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.227 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.193 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.225 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.193 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2314 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3145 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 759 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 47 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 338 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2314 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 295 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 2668 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 0.96 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.63 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 17.89 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|183 - A|363 } REMARK 3 ORIGIN FOR THE GROUP (A): 56.7818 13.3856 -8.1472 REMARK 3 T TENSOR REMARK 3 T11: -0.0128 T22: -0.2275 REMARK 3 T33: -0.1485 T12: -0.0057 REMARK 3 T13: -0.0128 T23: -0.0342 REMARK 3 L TENSOR REMARK 3 L11: 4.4555 L22: 3.8320 REMARK 3 L33: 1.7898 L12: 0.5990 REMARK 3 L13: 1.6453 L23: -0.3066 REMARK 3 S TENSOR REMARK 3 S11: 0.0414 S12: 0.0579 S13: -0.3878 REMARK 3 S21: -0.0287 S22: -0.1483 S23: -0.0632 REMARK 3 S31: 0.0824 S32: -0.1284 S33: 0.1069 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|364 - A|500 } REMARK 3 ORIGIN FOR THE GROUP (A): 67.3233 36.1229 -3.0119 REMARK 3 T TENSOR REMARK 3 T11: -0.0249 T22: -0.1535 REMARK 3 T33: -0.1074 T12: -0.0335 REMARK 3 T13: -0.1300 T23: 0.0082 REMARK 3 L TENSOR REMARK 3 L11: 3.2876 L22: 3.4135 REMARK 3 L33: 2.4996 L12: 1.7254 REMARK 3 L13: 0.3762 L23: -0.2189 REMARK 3 S TENSOR REMARK 3 S11: -0.1524 S12: 0.0594 S13: 0.2727 REMARK 3 S21: 0.0280 S22: -0.0357 S23: -0.0254 REMARK 3 S31: -0.2625 S32: 0.0674 S33: 0.1881 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6D0S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-APR-18. REMARK 100 THE DEPOSITION ID IS D_1000233754. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96749 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL CRYO-COOLED REMARK 200 SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDSCONV 0.6.3 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18331 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 42.380 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 20.67 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 32.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 21.48 REMARK 200 R MERGE FOR SHELL (I) : 1.19200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.470 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2QFZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.4 M AMMONIUM SULFATE, 0.1 M BIS REMARK 280 -TRIS, 0.001 M DTT, 1:100 CHYMOTRYPSIN, PH 6.3, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 145.13267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 72.56633 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 108.84950 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 36.28317 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 181.41583 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 145.13267 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 72.56633 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 36.28317 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 108.84950 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 181.41583 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 160 REMARK 465 HIS A 161 REMARK 465 HIS A 162 REMARK 465 HIS A 163 REMARK 465 HIS A 164 REMARK 465 HIS A 165 REMARK 465 HIS A 166 REMARK 465 SER A 167 REMARK 465 SER A 168 REMARK 465 GLY A 169 REMARK 465 ARG A 170 REMARK 465 GLU A 171 REMARK 465 ASN A 172 REMARK 465 LEU A 173 REMARK 465 TYR A 174 REMARK 465 PHE A 175 REMARK 465 GLN A 176 REMARK 465 GLY A 177 REMARK 465 MET A 178 REMARK 465 THR A 179 REMARK 465 VAL A 180 REMARK 465 ARG A 181 REMARK 465 GLU A 182 REMARK 465 ARG A 233 REMARK 465 ARG A 234 REMARK 465 LYS A 235 REMARK 465 LEU A 236 REMARK 465 ASP A 254 REMARK 465 SER A 255 REMARK 465 ARG A 256 REMARK 465 ASN A 257 REMARK 465 GLU A 258 REMARK 465 GLU A 259 REMARK 465 HIS A 260 REMARK 465 HIS A 261 REMARK 465 GLN A 262 REMARK 465 ASP A 263 REMARK 465 THR A 264 REMARK 465 TYR A 265 REMARK 465 ARG A 266 REMARK 465 GLN A 267 REMARK 465 ILE A 268 REMARK 465 HIS A 269 REMARK 465 ILE A 270 REMARK 465 ASP A 271 REMARK 465 ILE A 272 REMARK 465 PRO A 273 REMARK 465 ARG A 274 REMARK 465 THR A 275 REMARK 465 ASN A 276 REMARK 465 PRO A 277 REMARK 465 LEU A 278 REMARK 465 TYR A 307 REMARK 465 PRO A 434 REMARK 465 GLU A 435 REMARK 465 ASN A 501 REMARK 465 HIS A 502 REMARK 465 TYR A 503 REMARK 465 ARG A 504 REMARK 465 ARG A 505 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 183 CG CD CE NZ REMARK 470 THR A 184 OG1 CG2 REMARK 470 LYS A 188 CG CD CE NZ REMARK 470 ASP A 201 CG OD1 OD2 REMARK 470 LYS A 205 CD CE NZ REMARK 470 ASN A 230 CG OD1 ND2 REMARK 470 THR A 231 OG1 CG2 REMARK 470 GLU A 232 CG CD OE1 OE2 REMARK 470 THR A 237 OG1 CG2 REMARK 470 GLN A 239 CD OE1 NE2 REMARK 470 ARG A 240 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 241 CG CD CE NZ REMARK 470 GLU A 250 CG CD OE1 OE2 REMARK 470 ILE A 279 N CB CG1 CG2 CD1 REMARK 470 GLN A 283 CG CD OE1 NE2 REMARK 470 GLN A 288 CD OE1 NE2 REMARK 470 GLU A 289 CG CD OE1 OE2 REMARK 470 GLU A 292 CG CD OE1 OE2 REMARK 470 GLY A 306 CA C O REMARK 470 VAL A 308 N CB CG1 CG2 REMARK 470 GLN A 309 CG CD OE1 NE2 REMARK 470 ASN A 312 CG OD1 ND2 REMARK 470 ASP A 313 OD1 OD2 REMARK 470 GLU A 328 CG CD OE1 OE2 REMARK 470 GLU A 329 CG CD OE1 OE2 REMARK 470 ASP A 330 CG OD1 OD2 REMARK 470 VAL A 331 CG1 CG2 REMARK 470 ASN A 333 CG OD1 ND2 REMARK 470 ASN A 338 CG OD1 ND2 REMARK 470 GLN A 341 CG CD OE1 NE2 REMARK 470 GLN A 363 CD OE1 NE2 REMARK 470 PHE A 368 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 375 CG CD CE NZ REMARK 470 LYS A 378 CE NZ REMARK 470 GLU A 382 OE1 OE2 REMARK 470 ARG A 386 NH1 NH2 REMARK 470 GLU A 389 CG CD OE1 OE2 REMARK 470 ARG A 396 CD NE CZ NH1 NH2 REMARK 470 ARG A 397 NE CZ NH1 NH2 REMARK 470 ARG A 421 NE CZ NH1 NH2 REMARK 470 HIS A 439 CG ND1 CD2 CE1 NE2 REMARK 470 LEU A 442 CD1 CD2 REMARK 470 LYS A 451 NZ REMARK 470 LYS A 454 CG CD CE NZ REMARK 470 GLU A 460 CG CD OE1 OE2 REMARK 470 ILE A 475 CG1 CG2 CD1 REMARK 470 PRO A 500 CA C O CB CG CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 305 -64.59 -102.63 REMARK 500 GLU A 328 -71.80 -50.62 REMARK 500 PHE A 405 -34.26 -132.01 REMARK 500 ASN A 471 53.76 -140.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 601 DBREF 6D0S A 178 505 UNP Q9NU19 TB22B_HUMAN 178 505 SEQADV 6D0S MET A 160 UNP Q9NU19 EXPRESSION TAG SEQADV 6D0S HIS A 161 UNP Q9NU19 EXPRESSION TAG SEQADV 6D0S HIS A 162 UNP Q9NU19 EXPRESSION TAG SEQADV 6D0S HIS A 163 UNP Q9NU19 EXPRESSION TAG SEQADV 6D0S HIS A 164 UNP Q9NU19 EXPRESSION TAG SEQADV 6D0S HIS A 165 UNP Q9NU19 EXPRESSION TAG SEQADV 6D0S HIS A 166 UNP Q9NU19 EXPRESSION TAG SEQADV 6D0S SER A 167 UNP Q9NU19 EXPRESSION TAG SEQADV 6D0S SER A 168 UNP Q9NU19 EXPRESSION TAG SEQADV 6D0S GLY A 169 UNP Q9NU19 EXPRESSION TAG SEQADV 6D0S ARG A 170 UNP Q9NU19 EXPRESSION TAG SEQADV 6D0S GLU A 171 UNP Q9NU19 EXPRESSION TAG SEQADV 6D0S ASN A 172 UNP Q9NU19 EXPRESSION TAG SEQADV 6D0S LEU A 173 UNP Q9NU19 EXPRESSION TAG SEQADV 6D0S TYR A 174 UNP Q9NU19 EXPRESSION TAG SEQADV 6D0S PHE A 175 UNP Q9NU19 EXPRESSION TAG SEQADV 6D0S GLN A 176 UNP Q9NU19 EXPRESSION TAG SEQADV 6D0S GLY A 177 UNP Q9NU19 EXPRESSION TAG SEQRES 1 A 346 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 A 346 LEU TYR PHE GLN GLY MET THR VAL ARG GLU LYS THR ARG SEQRES 3 A 346 LEU GLU LYS PHE ARG GLN LEU LEU SER SER GLN ASN THR SEQRES 4 A 346 ASP LEU ASP GLU LEU ARG LYS CYS SER TRP PRO GLY VAL SEQRES 5 A 346 PRO ARG GLU VAL ARG PRO ILE THR TRP ARG LEU LEU SER SEQRES 6 A 346 GLY TYR LEU PRO ALA ASN THR GLU ARG ARG LYS LEU THR SEQRES 7 A 346 LEU GLN ARG LYS ARG GLU GLU TYR PHE GLY PHE ILE GLU SEQRES 8 A 346 GLN TYR TYR ASP SER ARG ASN GLU GLU HIS HIS GLN ASP SEQRES 9 A 346 THR TYR ARG GLN ILE HIS ILE ASP ILE PRO ARG THR ASN SEQRES 10 A 346 PRO LEU ILE PRO LEU PHE GLN GLN PRO LEU VAL GLN GLU SEQRES 11 A 346 ILE PHE GLU ARG ILE LEU PHE ILE TRP ALA ILE ARG HIS SEQRES 12 A 346 PRO ALA SER GLY TYR VAL GLN GLY ILE ASN ASP LEU VAL SEQRES 13 A 346 THR PRO PHE PHE VAL VAL PHE LEU SER GLU TYR VAL GLU SEQRES 14 A 346 GLU ASP VAL GLU ASN PHE ASP VAL THR ASN LEU SER GLN SEQRES 15 A 346 ASP MET LEU ARG SER ILE GLU ALA ASP SER PHE TRP CYS SEQRES 16 A 346 MET SER LYS LEU LEU ASP GLY ILE GLN ASP ASN TYR THR SEQRES 17 A 346 PHE ALA GLN PRO GLY ILE GLN LYS LYS VAL LYS ALA LEU SEQRES 18 A 346 GLU GLU LEU VAL SER ARG ILE ASP GLU GLN VAL HIS ASN SEQRES 19 A 346 HIS PHE ARG ARG TYR GLU VAL GLU TYR LEU GLN PHE ALA SEQRES 20 A 346 PHE ARG TRP MET ASN ASN LEU LEU MET ARG GLU LEU PRO SEQRES 21 A 346 LEU ARG CYS THR ILE ARG LEU TRP ASP THR TYR GLN SER SEQRES 22 A 346 GLU PRO GLU GLY PHE SER HIS PHE HIS LEU TYR VAL CYS SEQRES 23 A 346 ALA ALA PHE LEU ILE LYS TRP ARG LYS GLU ILE LEU ASP SEQRES 24 A 346 GLU GLU ASP PHE GLN GLY LEU LEU MET LEU LEU GLN ASN SEQRES 25 A 346 LEU PRO THR ILE HIS TRP GLY ASN GLU GLU ILE GLY LEU SEQRES 26 A 346 LEU LEU ALA GLU ALA TYR ARG LEU LYS TYR MET PHE ALA SEQRES 27 A 346 ASP ALA PRO ASN HIS TYR ARG ARG HET SO4 A 601 5 HET UNX A 602 1 HET UNX A 603 1 HET UNX A 604 1 HET UNX A 605 1 HET UNX A 606 1 HET UNX A 607 1 HET UNX A 608 1 HET UNX A 609 1 HET UNX A 610 1 HET UNX A 611 1 HETNAM SO4 SULFATE ION HETNAM UNX UNKNOWN ATOM OR ION FORMUL 2 SO4 O4 S 2- FORMUL 3 UNX 10(X) HELIX 1 AA1 THR A 184 SER A 194 1 11 HELIX 2 AA2 ASP A 199 TRP A 208 1 10 HELIX 3 AA3 PRO A 212 GLU A 214 5 3 HELIX 4 AA4 VAL A 215 GLY A 225 1 11 HELIX 5 AA5 LEU A 238 TYR A 253 1 16 HELIX 6 AA6 ILE A 279 GLN A 283 5 5 HELIX 7 AA7 GLN A 284 HIS A 302 1 19 HELIX 8 AA8 ASN A 312 LEU A 314 5 3 HELIX 9 AA9 VAL A 315 GLU A 325 1 11 HELIX 10 AB1 ASP A 335 LEU A 339 5 5 HELIX 11 AB2 SER A 340 GLY A 361 1 22 HELIX 12 AB3 ILE A 362 TYR A 366 5 5 HELIX 13 AB4 GLN A 370 ASP A 388 1 19 HELIX 14 AB5 ASP A 388 TYR A 398 1 11 HELIX 15 AB6 TYR A 402 ASN A 412 1 11 HELIX 16 AB7 LEU A 414 LEU A 418 5 5 HELIX 17 AB8 PRO A 419 GLU A 433 1 15 HELIX 18 AB9 HIS A 439 TRP A 452 1 14 HELIX 19 AC1 TRP A 452 ASP A 458 1 7 HELIX 20 AC2 ASP A 461 ASN A 471 1 11 HELIX 21 AC3 GLY A 478 PHE A 496 1 19 SITE 1 AC1 4 ARG A 301 GLU A 389 GLN A 390 ASN A 393 CRYST1 78.015 78.015 217.699 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012818 0.007401 0.000000 0.00000 SCALE2 0.000000 0.014801 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004593 0.00000