HEADER TRANSCRIPTION 11-APR-18 6D0Y TITLE X-RAY CRYSTAL STRUCTURE OF PGC-1BETA C-TERMINUS BOUND TO THE CBP80- TITLE 2 CBP20 CAP BINDING COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEAR CAP-BINDING PROTEIN SUBUNIT 1; COMPND 3 CHAIN: C; COMPND 4 SYNONYM: 80 KDA NUCLEAR CAP-BINDING PROTEIN,NCBP 80 KDA SUBUNIT; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: NUCLEAR CAP-BINDING PROTEIN SUBUNIT 2; COMPND 8 CHAIN: A; COMPND 9 SYNONYM: 20 KDA NUCLEAR CAP-BINDING PROTEIN,CELL PROLIFERATION- COMPND 10 INDUCING GENE 55 PROTEIN,NCBP 20 KDA SUBUNIT,CBP20,NCBP-INTERACTING COMPND 11 PROTEIN 1,NIP1; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA COMPND 15 COACTIVATOR 1-BETA; COMPND 16 CHAIN: B; COMPND 17 SYNONYM: PPARGC-1-BETA,PGC-1-RELATED ESTROGEN RECEPTOR ALPHA COMPND 18 COACTIVATOR; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NCBP1, CBP80, NCBP; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: NCBP2, CBP20, PIG55; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 18 ORGANISM_COMMON: HUMAN; SOURCE 19 ORGANISM_TAXID: 9606 KEYWDS CAP-BINDING, M7GPPPA, TRANSCRIPTION, MRNA EXPDTA X-RAY DIFFRACTION AUTHOR M.L.GLEGHORN,L.E.MAQUAT REVDAT 3 01-JAN-20 6D0Y 1 REMARK REVDAT 2 09-MAY-18 6D0Y 1 JRNL REVDAT 1 25-APR-18 6D0Y 0 JRNL AUTH H.CHO,X.RAMBOUT,M.L.GLEGHORN,P.Q.T.NGUYEN,C.R.PHIPPS, JRNL AUTH 2 K.MIYOSHI,J.R.MYERS,N.KATAOKA,R.FASAN,L.E.MAQUAT JRNL TITL TRANSCRIPTIONAL COACTIVATOR PGC-1 ALPHA CONTAINS A NOVEL JRNL TITL 2 CBP80-BINDING MOTIF THAT ORCHESTRATES EFFICIENT TARGET GENE JRNL TITL 3 EXPRESSION. JRNL REF GENES DEV. V. 32 555 2018 JRNL REFN ISSN 1549-5477 JRNL PMID 29654059 JRNL DOI 10.1101/GAD.309773.117 REMARK 2 REMARK 2 RESOLUTION. 2.68 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.68 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.05 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 30784 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.500 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.0571 - 6.4416 0.99 2236 155 0.1733 0.2038 REMARK 3 2 6.4416 - 5.1165 1.00 2157 150 0.1842 0.2282 REMARK 3 3 5.1165 - 4.4708 0.99 2102 146 0.1510 0.2103 REMARK 3 4 4.4708 - 4.0625 0.99 2105 146 0.1443 0.2159 REMARK 3 5 4.0625 - 3.7716 1.00 2081 145 0.1549 0.1964 REMARK 3 6 3.7716 - 3.5494 1.00 2104 146 0.1724 0.2105 REMARK 3 7 3.5494 - 3.3717 1.00 2081 145 0.1784 0.2555 REMARK 3 8 3.3717 - 3.2250 1.00 2105 146 0.1895 0.2465 REMARK 3 9 3.2250 - 3.1009 0.99 2043 143 0.2156 0.3356 REMARK 3 10 3.1009 - 2.9940 0.99 2056 142 0.2124 0.2530 REMARK 3 11 2.9940 - 2.9004 1.00 2065 143 0.2162 0.3359 REMARK 3 12 2.9004 - 2.8175 1.00 2082 145 0.2327 0.2781 REMARK 3 13 2.8175 - 2.7433 1.00 2075 144 0.2414 0.3699 REMARK 3 14 2.7433 - 2.6764 0.73 1492 104 0.2737 0.3335 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.230 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.21 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 7546 REMARK 3 ANGLE : 0.552 10226 REMARK 3 CHIRALITY : 0.036 1121 REMARK 3 PLANARITY : 0.003 1299 REMARK 3 DIHEDRAL : 15.959 4520 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6D0Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-APR-18. REMARK 100 THE DEPOSITION ID IS D_1000233845. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-MAR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9553 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30950 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.670 REMARK 200 RESOLUTION RANGE LOW (A) : 39.050 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.21100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.67 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 1.18800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM CHLORIDE, 0.1 M TRIS REMARK 280 (PH 7.0), 10% [W/V] POLYETHYLENE GLYCOL 8000, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.05300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.39750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.94850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.39750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.05300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 55.94850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET C 23 REMARK 465 ALA C 24 REMARK 465 ASN C 25 REMARK 465 LYS C 522 REMARK 465 ASP C 523 REMARK 465 VAL C 524 REMARK 465 PRO C 525 REMARK 465 ASN C 526 REMARK 465 PRO C 527 REMARK 465 ASN C 528 REMARK 465 GLN C 529 REMARK 465 ASP C 530 REMARK 465 ASP C 531 REMARK 465 ASP C 532 REMARK 465 ASP C 533 REMARK 465 ASP C 534 REMARK 465 GLU C 535 REMARK 465 GLY C 536 REMARK 465 PHE C 537 REMARK 465 SER C 538 REMARK 465 LYS C 671 REMARK 465 ARG C 672 REMARK 465 ARG C 673 REMARK 465 SER C 674 REMARK 465 ASP C 675 REMARK 465 ASP C 676 REMARK 465 ASP C 677 REMARK 465 ASP C 678 REMARK 465 ARG C 679 REMARK 465 SER C 680 REMARK 465 SER C 681 REMARK 465 ASP C 682 REMARK 465 ARG C 683 REMARK 465 LYS C 684 REMARK 465 ASP C 685 REMARK 465 TYR C 795 REMARK 465 PHE C 796 REMARK 465 GLN C 797 REMARK 465 GLY C 798 REMARK 465 HIS C 799 REMARK 465 HIS C 800 REMARK 465 HIS C 801 REMARK 465 HIS C 802 REMARK 465 HIS C 803 REMARK 465 HIS C 804 REMARK 465 GLY A -19 REMARK 465 PRO A -18 REMARK 465 LEU A -17 REMARK 465 HIS A -16 REMARK 465 MET A -15 REMARK 465 GLY A -14 REMARK 465 GLY A -13 REMARK 465 SER A -12 REMARK 465 PRO A -11 REMARK 465 GLU A -10 REMARK 465 PHE A -9 REMARK 465 PRO A -8 REMARK 465 GLY A -7 REMARK 465 ARG A -6 REMARK 465 LEU A -5 REMARK 465 GLU A -4 REMARK 465 ALA A -3 REMARK 465 ALA A -2 REMARK 465 ASP A -1 REMARK 465 PRO A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLY A 3 REMARK 465 GLY A 4 REMARK 465 LEU A 5 REMARK 465 LEU A 152 REMARK 465 ALA A 153 REMARK 465 GLN A 154 REMARK 465 ASN A 155 REMARK 465 GLN A 156 REMARK 465 ACE B -10 REMARK 465 SER B -9 REMARK 465 GLU B -8 REMARK 465 GLU B -7 REMARK 465 ALA B -6 REMARK 465 LEU B -5 REMARK 465 PRO B -4 REMARK 465 ALA B -3 REMARK 465 SER B -2 REMARK 465 GLY B -1 REMARK 465 LYS B 0 REMARK 465 HIS B 20 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU C 26 CG CD OE1 OE2 REMARK 470 ARG C 668 CG CD NE CZ NH1 NH2 REMARK 470 GLN C 669 CG CD OE1 NE2 REMARK 470 HIS C 670 CG ND1 CD2 CE1 NE2 REMARK 470 VAL C 687 CG1 CG2 REMARK 470 LEU C 688 CG CD1 CD2 REMARK 470 GLU C 689 CG CD OE1 OE2 REMARK 470 GLU C 690 CG CD OE1 OE2 REMARK 470 GLN C 691 CG CD OE1 NE2 REMARK 470 GLU C 693 CG CD OE1 OE2 REMARK 470 LYS A 7 CG CD CE NZ REMARK 470 SER B 1 OG REMARK 470 LYS B 2 CG CD CE NZ REMARK 470 GLU B 4 CG CD OE1 OE2 REMARK 470 GLN B 17 CG CD OE1 NE2 REMARK 470 SER B 18 OG REMARK 470 LEU B 19 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASN C 480 C PRO C 481 N 0.123 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN C 120 79.96 -101.75 REMARK 500 PRO C 346 74.96 -64.07 REMARK 500 SER C 386 -51.15 -129.38 REMARK 500 SER C 460 -104.75 -129.71 REMARK 500 LEU C 769 -57.85 -121.49 REMARK 500 MET A 76 -67.25 -94.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GTA A 201 DBREF 6D0Y C 24 790 UNP Q09161 NCBP1_HUMAN 24 790 DBREF 6D0Y A 1 156 UNP P52298 NCBP2_HUMAN 1 156 DBREF 6D0Y B -9 20 UNP Q86YN6 PRGC2_HUMAN 955 984 SEQADV 6D0Y MET C 23 UNP Q09161 INITIATING METHIONINE SEQADV 6D0Y VAL C 479 UNP Q09161 ALA 479 CONFLICT SEQADV 6D0Y ALA C 791 UNP Q09161 EXPRESSION TAG SEQADV 6D0Y GLU C 792 UNP Q09161 EXPRESSION TAG SEQADV 6D0Y ASN C 793 UNP Q09161 EXPRESSION TAG SEQADV 6D0Y LEU C 794 UNP Q09161 EXPRESSION TAG SEQADV 6D0Y TYR C 795 UNP Q09161 EXPRESSION TAG SEQADV 6D0Y PHE C 796 UNP Q09161 EXPRESSION TAG SEQADV 6D0Y GLN C 797 UNP Q09161 EXPRESSION TAG SEQADV 6D0Y GLY C 798 UNP Q09161 EXPRESSION TAG SEQADV 6D0Y HIS C 799 UNP Q09161 EXPRESSION TAG SEQADV 6D0Y HIS C 800 UNP Q09161 EXPRESSION TAG SEQADV 6D0Y HIS C 801 UNP Q09161 EXPRESSION TAG SEQADV 6D0Y HIS C 802 UNP Q09161 EXPRESSION TAG SEQADV 6D0Y HIS C 803 UNP Q09161 EXPRESSION TAG SEQADV 6D0Y HIS C 804 UNP Q09161 EXPRESSION TAG SEQADV 6D0Y GLY A -19 UNP P52298 EXPRESSION TAG SEQADV 6D0Y PRO A -18 UNP P52298 EXPRESSION TAG SEQADV 6D0Y LEU A -17 UNP P52298 EXPRESSION TAG SEQADV 6D0Y HIS A -16 UNP P52298 EXPRESSION TAG SEQADV 6D0Y MET A -15 UNP P52298 EXPRESSION TAG SEQADV 6D0Y GLY A -14 UNP P52298 EXPRESSION TAG SEQADV 6D0Y GLY A -13 UNP P52298 EXPRESSION TAG SEQADV 6D0Y SER A -12 UNP P52298 EXPRESSION TAG SEQADV 6D0Y PRO A -11 UNP P52298 EXPRESSION TAG SEQADV 6D0Y GLU A -10 UNP P52298 EXPRESSION TAG SEQADV 6D0Y PHE A -9 UNP P52298 EXPRESSION TAG SEQADV 6D0Y PRO A -8 UNP P52298 EXPRESSION TAG SEQADV 6D0Y GLY A -7 UNP P52298 EXPRESSION TAG SEQADV 6D0Y ARG A -6 UNP P52298 EXPRESSION TAG SEQADV 6D0Y LEU A -5 UNP P52298 EXPRESSION TAG SEQADV 6D0Y GLU A -4 UNP P52298 EXPRESSION TAG SEQADV 6D0Y ALA A -3 UNP P52298 EXPRESSION TAG SEQADV 6D0Y ALA A -2 UNP P52298 EXPRESSION TAG SEQADV 6D0Y ASP A -1 UNP P52298 EXPRESSION TAG SEQADV 6D0Y PRO A 0 UNP P52298 EXPRESSION TAG SEQADV 6D0Y ACE B -10 UNP Q86YN6 EXPRESSION TAG SEQRES 1 C 782 MET ALA ASN GLU THR GLU ASP HIS LEU GLU SER LEU ILE SEQRES 2 C 782 CYS LYS VAL GLY GLU LYS SER ALA CYS SER LEU GLU SER SEQRES 3 C 782 ASN LEU GLU GLY LEU ALA GLY VAL LEU GLU ALA ASP LEU SEQRES 4 C 782 PRO ASN TYR LYS SER LYS ILE LEU ARG LEU LEU CYS THR SEQRES 5 C 782 VAL ALA ARG LEU LEU PRO GLU LYS LEU THR ILE TYR THR SEQRES 6 C 782 THR LEU VAL GLY LEU LEU ASN ALA ARG ASN TYR ASN PHE SEQRES 7 C 782 GLY GLY GLU PHE VAL GLU ALA MET ILE ARG GLN LEU LYS SEQRES 8 C 782 GLU SER LEU LYS ALA ASN ASN TYR ASN GLU ALA VAL TYR SEQRES 9 C 782 LEU VAL ARG PHE LEU SER ASP LEU VAL ASN CYS HIS VAL SEQRES 10 C 782 ILE ALA ALA PRO SER MET VAL ALA MET PHE GLU ASN PHE SEQRES 11 C 782 VAL SER VAL THR GLN GLU GLU ASP VAL PRO GLN VAL ARG SEQRES 12 C 782 ARG ASP TRP TYR VAL TYR ALA PHE LEU SER SER LEU PRO SEQRES 13 C 782 TRP VAL GLY LYS GLU LEU TYR GLU LYS LYS ASP ALA GLU SEQRES 14 C 782 MET ASP ARG ILE PHE ALA ASN THR GLU SER TYR LEU LYS SEQRES 15 C 782 ARG ARG GLN LYS THR HIS VAL PRO MET LEU GLN VAL TRP SEQRES 16 C 782 THR ALA ASP LYS PRO HIS PRO GLN GLU GLU TYR LEU ASP SEQRES 17 C 782 CYS LEU TRP ALA GLN ILE GLN LYS LEU LYS LYS ASP ARG SEQRES 18 C 782 TRP GLN GLU ARG HIS ILE LEU ARG PRO TYR LEU ALA PHE SEQRES 19 C 782 ASP SER ILE LEU CYS GLU ALA LEU GLN HIS ASN LEU PRO SEQRES 20 C 782 PRO PHE THR PRO PRO PRO HIS THR GLU ASP SER VAL TYR SEQRES 21 C 782 PRO MET PRO ARG VAL ILE PHE ARG MET PHE ASP TYR THR SEQRES 22 C 782 ASP ASP PRO GLU GLY PRO VAL MET PRO GLY SER HIS SER SEQRES 23 C 782 VAL GLU ARG PHE VAL ILE GLU GLU ASN LEU HIS CYS ILE SEQRES 24 C 782 ILE LYS SER HIS TRP LYS GLU ARG LYS THR CYS ALA ALA SEQRES 25 C 782 GLN LEU VAL SER TYR PRO GLY LYS ASN LYS ILE PRO LEU SEQRES 26 C 782 ASN TYR HIS ILE VAL GLU VAL ILE PHE ALA GLU LEU PHE SEQRES 27 C 782 GLN LEU PRO ALA PRO PRO HIS ILE ASP VAL MET TYR THR SEQRES 28 C 782 THR LEU LEU ILE GLU LEU CYS LYS LEU GLN PRO GLY SER SEQRES 29 C 782 LEU PRO GLN VAL LEU ALA GLN ALA THR GLU MET LEU TYR SEQRES 30 C 782 MET ARG LEU ASP THR MET ASN THR THR CYS VAL ASP ARG SEQRES 31 C 782 PHE ILE ASN TRP PHE SER HIS HIS LEU SER ASN PHE GLN SEQRES 32 C 782 PHE ARG TRP SER TRP GLU ASP TRP SER ASP CYS LEU SER SEQRES 33 C 782 GLN ASP PRO GLU SER PRO LYS PRO LYS PHE VAL ARG GLU SEQRES 34 C 782 VAL LEU GLU LYS CYS MET ARG LEU SER TYR HIS GLN ARG SEQRES 35 C 782 ILE LEU ASP ILE VAL PRO PRO THR PHE SER ALA LEU CYS SEQRES 36 C 782 PRO VAL ASN PRO THR CYS ILE TYR LYS TYR GLY ASP GLU SEQRES 37 C 782 SER SER ASN SER LEU PRO GLY HIS SER VAL ALA LEU CYS SEQRES 38 C 782 LEU ALA VAL ALA PHE LYS SER LYS ALA THR ASN ASP GLU SEQRES 39 C 782 ILE PHE SER ILE LEU LYS ASP VAL PRO ASN PRO ASN GLN SEQRES 40 C 782 ASP ASP ASP ASP ASP GLU GLY PHE SER PHE ASN PRO LEU SEQRES 41 C 782 LYS ILE GLU VAL PHE VAL GLN THR LEU LEU HIS LEU ALA SEQRES 42 C 782 ALA LYS SER PHE SER HIS SER PHE SER ALA LEU ALA LYS SEQRES 43 C 782 PHE HIS GLU VAL PHE LYS THR LEU ALA GLU SER ASP GLU SEQRES 44 C 782 GLY LYS LEU HIS VAL LEU ARG VAL MET PHE GLU VAL TRP SEQRES 45 C 782 ARG ASN HIS PRO GLN MET ILE ALA VAL LEU VAL ASP LYS SEQRES 46 C 782 MET ILE ARG THR GLN ILE VAL ASP CYS ALA ALA VAL ALA SEQRES 47 C 782 ASN TRP ILE PHE SER SER GLU LEU SER ARG ASP PHE THR SEQRES 48 C 782 ARG LEU PHE VAL TRP GLU ILE LEU HIS SER THR ILE ARG SEQRES 49 C 782 LYS MET ASN LYS HIS VAL LEU LYS ILE GLN LYS GLU LEU SEQRES 50 C 782 GLU GLU ALA LYS GLU LYS LEU ALA ARG GLN HIS LYS ARG SEQRES 51 C 782 ARG SER ASP ASP ASP ASP ARG SER SER ASP ARG LYS ASP SEQRES 52 C 782 GLY VAL LEU GLU GLU GLN ILE GLU ARG LEU GLN GLU LYS SEQRES 53 C 782 VAL GLU SER ALA GLN SER GLU GLN LYS ASN LEU PHE LEU SEQRES 54 C 782 VAL ILE PHE GLN ARG PHE ILE MET ILE LEU THR GLU HIS SEQRES 55 C 782 LEU VAL ARG CYS GLU THR ASP GLY THR SER VAL LEU THR SEQRES 56 C 782 PRO TRP TYR LYS ASN CYS ILE GLU ARG LEU GLN GLN ILE SEQRES 57 C 782 PHE LEU GLN HIS HIS GLN ILE ILE GLN GLN TYR MET VAL SEQRES 58 C 782 THR LEU GLU ASN LEU LEU PHE THR ALA GLU LEU ASP PRO SEQRES 59 C 782 HIS ILE LEU ALA VAL PHE GLN GLN PHE CYS ALA LEU GLN SEQRES 60 C 782 ALA ALA GLU ASN LEU TYR PHE GLN GLY HIS HIS HIS HIS SEQRES 61 C 782 HIS HIS SEQRES 1 A 176 GLY PRO LEU HIS MET GLY GLY SER PRO GLU PHE PRO GLY SEQRES 2 A 176 ARG LEU GLU ALA ALA ASP PRO MET SER GLY GLY LEU LEU SEQRES 3 A 176 LYS ALA LEU ARG SER ASP SER TYR VAL GLU LEU SER GLN SEQRES 4 A 176 TYR ARG ASP GLN HIS PHE ARG GLY ASP ASN GLU GLU GLN SEQRES 5 A 176 GLU LYS LEU LEU LYS LYS SER CYS THR LEU TYR VAL GLY SEQRES 6 A 176 ASN LEU SER PHE TYR THR THR GLU GLU GLN ILE TYR GLU SEQRES 7 A 176 LEU PHE SER LYS SER GLY ASP ILE LYS LYS ILE ILE MET SEQRES 8 A 176 GLY LEU ASP LYS MET LYS LYS THR ALA CYS GLY PHE CYS SEQRES 9 A 176 PHE VAL GLU TYR TYR SER ARG ALA ASP ALA GLU ASN ALA SEQRES 10 A 176 MET ARG TYR ILE ASN GLY THR ARG LEU ASP ASP ARG ILE SEQRES 11 A 176 ILE ARG THR ASP TRP ASP ALA GLY PHE LYS GLU GLY ARG SEQRES 12 A 176 GLN TYR GLY ARG GLY ARG SER GLY GLY GLN VAL ARG ASP SEQRES 13 A 176 GLU TYR ARG GLN ASP TYR ASP ALA GLY ARG GLY GLY TYR SEQRES 14 A 176 GLY LYS LEU ALA GLN ASN GLN SEQRES 1 B 31 ACE SER GLU GLU ALA LEU PRO ALA SER GLY LYS SER LYS SEQRES 2 B 31 IYR GLU ALA MET ASP PHE ASP SER LEU LEU LYS GLU ALA SEQRES 3 B 31 GLN GLN SER LEU HIS MODRES 6D0Y IYR B 3 TYR MODIFIED RESIDUE HET IYR B 3 19 HET MG C 901 1 HET GTA A 201 78 HETNAM IYR 3-IODO-TYROSINE HETNAM MG MAGNESIUM ION HETNAM GTA P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE HETSYN GTA 7-METHYL-GPPPA FORMUL 3 IYR C9 H10 I N O3 FORMUL 4 MG MG 2+ FORMUL 5 GTA C21 H30 N10 O17 P3 1+ FORMUL 6 HOH *274(H2 O) HELIX 1 AA1 GLU C 26 LYS C 37 1 12 HELIX 2 AA2 SER C 45 ASP C 60 1 16 HELIX 3 AA3 ASP C 60 LEU C 79 1 20 HELIX 4 AA4 LYS C 82 ASN C 97 1 16 HELIX 5 AA5 ASN C 97 ALA C 118 1 22 HELIX 6 AA6 ASN C 120 CYS C 137 1 18 HELIX 7 AA7 ALA C 141 SER C 154 1 14 HELIX 8 AA8 VAL C 155 GLU C 158 5 4 HELIX 9 AA9 PRO C 162 LYS C 188 1 27 HELIX 10 AB1 ASP C 189 ARG C 205 1 17 HELIX 11 AB2 HIS C 210 GLN C 215 1 6 HELIX 12 AB3 GLU C 227 ASP C 242 1 16 HELIX 13 AB4 ARG C 251 ALA C 255 5 5 HELIX 14 AB5 PHE C 256 GLU C 262 1 7 HELIX 15 AB6 ASP C 293 ASP C 297 5 5 HELIX 16 AB7 SER C 308 TRP C 326 1 19 HELIX 17 AB8 GLU C 328 SER C 338 1 11 HELIX 18 AB9 PRO C 346 PHE C 360 1 15 HELIX 19 AC1 ASP C 369 GLN C 383 1 15 HELIX 20 AC2 SER C 386 ARG C 401 1 16 HELIX 21 AC3 LEU C 402 MET C 405 5 4 HELIX 22 AC4 ASN C 406 ASN C 423 1 18 HELIX 23 AC5 SER C 429 LEU C 437 5 9 HELIX 24 AC6 SER C 443 SER C 460 1 18 HELIX 25 AC7 TYR C 461 VAL C 469 1 9 HELIX 26 AC8 PRO C 470 CYS C 477 5 8 HELIX 27 AC9 GLY C 497 SER C 510 1 14 HELIX 28 AD1 THR C 513 LEU C 521 1 9 HELIX 29 AD2 ASN C 540 ALA C 555 1 16 HELIX 30 AD3 SER C 558 PHE C 569 1 12 HELIX 31 AD4 PHE C 569 ALA C 577 1 9 HELIX 32 AD5 SER C 579 ARG C 595 1 17 HELIX 33 AD6 HIS C 597 THR C 611 1 15 HELIX 34 AD7 ASP C 615 PHE C 624 1 10 HELIX 35 AD8 SER C 625 PHE C 632 5 8 HELIX 36 AD9 ARG C 634 HIS C 670 1 37 HELIX 37 AE1 VAL C 687 GLY C 732 1 46 HELIX 38 AE2 THR C 737 HIS C 754 1 18 HELIX 39 AE3 HIS C 754 GLN C 759 1 6 HELIX 40 AE4 TYR C 761 LEU C 769 1 9 HELIX 41 AE5 ASP C 775 ASN C 793 1 19 HELIX 42 AE6 ASP A 28 LYS A 38 1 11 HELIX 43 AE7 THR A 52 SER A 61 1 10 HELIX 44 AE8 LYS A 62 GLY A 64 5 3 HELIX 45 AE9 SER A 90 ILE A 101 1 12 HELIX 46 AF1 GLN A 133 GLU A 137 5 5 HELIX 47 AF2 ASP B 7 LEU B 19 1 13 SHEET 1 AA1 4 ILE A 66 LEU A 73 0 SHEET 2 AA1 4 ALA A 80 TYR A 88 -1 O PHE A 83 N GLY A 72 SHEET 3 AA1 4 THR A 41 GLY A 45 -1 N VAL A 44 O CYS A 84 SHEET 4 AA1 4 ARG A 112 TRP A 115 -1 O ASP A 114 N TYR A 43 SHEET 1 AA2 2 ARG A 105 LEU A 106 0 SHEET 2 AA2 2 ARG A 109 ILE A 110 -1 O ARG A 109 N LEU A 106 LINK OG1 THR C 764 MG MG C 901 1555 1555 2.54 LINK C LYS B 2 N IYR B 3 1555 1555 1.33 LINK C IYR B 3 N GLU B 4 1555 1555 1.33 CISPEP 1 LYS C 221 PRO C 222 0 2.91 CISPEP 2 LEU C 362 PRO C 363 0 6.74 SITE 1 AC1 3 LYS C 707 VAL C 763 THR C 764 SITE 1 AC2 16 TYR A 20 TYR A 43 PHE A 83 ARG A 112 SITE 2 AC2 16 ASP A 114 TRP A 115 ASP A 116 ARG A 123 SITE 3 AC2 16 TYR A 125 GLY A 126 ARG A 127 GLN A 133 SITE 4 AC2 16 VAL A 134 ARG A 135 TYR A 138 HOH A 302 CRYST1 78.106 111.897 124.795 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012803 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008937 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008013 0.00000