HEADER CELL ADHESION 11-APR-18 6D10 TITLE CS-ROSETTA DETERMINED STRUCTURES OF THE C-TERMINAL DOMAIN OF ALGF FROM TITLE 2 P. AERUGINOSA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALGINATE BIOSYNTHESIS PROTEIN ALGF; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 30-216; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA (STRAIN ATCC 15692 / DSM SOURCE 3 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); SOURCE 4 ORGANISM_TAXID: 208964; SOURCE 5 STRAIN: ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 SOURCE 6 / 1C / PRS 101 / PAO1; SOURCE 7 GENE: ALGF, PA3550; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 EXPRESSION_SYSTEM_VARIANT: CODONPLUS; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PET24B KEYWDS CARBOHYDRATE ACETYLATION EPS EXPORT, CELL ADHESION EXPDTA SOLUTION NMR; SOLUTION SCATTERING NUMMDL 10 AUTHOR S.TAMMAM,P.L.HOWELL REVDAT 3 01-MAY-24 6D10 1 REMARK REVDAT 2 08-JAN-20 6D10 1 REMARK REVDAT 1 17-APR-19 6D10 0 JRNL AUTH K.E.LOW,S.D.TAMMAM,G.B.WHITFIELD,L.M.RILEY,J.T.WEADGE, JRNL AUTH 2 S.J.CALDWELL,P.BAKER,P.A.CHONG,M.T.C.WALVOORT,E.N.KITOVA, JRNL AUTH 3 T.D.GRANT,E.H.SNELL,J.S.KLASSEN,J.D.C.CODEE,P.L.HOWELL JRNL TITL PSEUDOMONAS AERUGINOSA ALGF IS AN ADAPTOR PROTEIN REQUIRED JRNL TITL 2 FOR ACETYLATION OF THE ALGINATE EXOPOLYSACCHARIDE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CS-ROSETTA REMARK 3 AUTHORS : SHEN, VERNON, BAKER AND BAX REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6D10 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-APR-18. REMARK 100 THE DEPOSITION ID IS D_1000233820. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 0.05 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1 MM [U-13C; U-15N] ALGF, 50 MM REMARK 210 POTASSIUM PHOSPHATE, 2 % V/V REMARK 210 GLYCEROL, 10 MM DTT, 90% H2O/10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCO; 3D REMARK 210 HNCA; 3D HNCACB; 3D CBCA(CO)NH; REMARK 210 3D C(CO)NH; 3D HCCH-TOCSY; 3D 1H- REMARK 210 15N NOESY; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 3D 1H-13C NOESY REMARK 210 AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRVIEW, ANALYSIS, NMRPIPE, REMARK 210 NMRDRAW, CS-ROSETTA REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 3000 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 265 REMARK 265 EXPERIMENTAL DETAILS REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-10 REMARK 465 RES C SSSEQI REMARK 465 MET A 30 REMARK 465 GLU A 31 REMARK 465 GLY A 32 REMARK 465 ALA A 33 REMARK 465 LEU A 34 REMARK 465 TYR A 35 REMARK 465 GLY A 36 REMARK 465 PRO A 37 REMARK 465 GLN A 38 REMARK 465 ALA A 39 REMARK 465 PRO A 40 REMARK 465 LYS A 41 REMARK 465 GLY A 42 REMARK 465 SER A 43 REMARK 465 ALA A 44 REMARK 465 PHE A 45 REMARK 465 VAL A 46 REMARK 465 ARG A 47 REMARK 465 ALA A 48 REMARK 465 TYR A 49 REMARK 465 ASN A 50 REMARK 465 ALA A 51 REMARK 465 GLY A 52 REMARK 465 ASN A 53 REMARK 465 SER A 54 REMARK 465 GLU A 55 REMARK 465 LEU A 56 REMARK 465 ASP A 57 REMARK 465 VAL A 58 REMARK 465 SER A 59 REMARK 465 VAL A 60 REMARK 465 GLY A 61 REMARK 465 SER A 62 REMARK 465 THR A 63 REMARK 465 SER A 64 REMARK 465 LEU A 65 REMARK 465 ASN A 66 REMARK 465 ASP A 67 REMARK 465 VAL A 68 REMARK 465 ALA A 69 REMARK 465 PRO A 70 REMARK 465 LEU A 71 REMARK 465 GLY A 72 REMARK 465 SER A 73 REMARK 465 SER A 74 REMARK 465 ASP A 75 REMARK 465 PHE A 76 REMARK 465 LYS A 77 REMARK 465 PHE A 78 REMARK 465 LEU A 79 REMARK 465 PRO A 80 REMARK 465 PRO A 81 REMARK 465 GLY A 82 REMARK 465 SER A 83 REMARK 465 TYR A 84 REMARK 465 THR A 85 REMARK 465 ALA A 86 REMARK 465 GLN A 87 REMARK 465 VAL A 88 REMARK 465 GLY A 89 REMARK 465 GLN A 90 REMARK 465 GLN A 91 REMARK 465 SER A 92 REMARK 465 LEU A 93 REMARK 465 PRO A 94 REMARK 465 VAL A 95 REMARK 465 LYS A 96 REMARK 465 LEU A 97 REMARK 465 ASP A 98 REMARK 465 PRO A 99 REMARK 465 ASP A 100 REMARK 465 SER A 101 REMARK 465 TYR A 102 REMARK 465 TYR A 103 REMARK 465 THR A 104 REMARK 465 LEU A 105 REMARK 465 VAL A 106 REMARK 465 SER A 107 REMARK 465 GLN A 108 REMARK 465 PRO A 109 REMARK 465 GLY A 110 REMARK 465 GLY A 111 REMARK 465 LYS A 112 REMARK 465 PRO A 113 REMARK 465 GLN A 114 REMARK 465 LEU A 115 REMARK 465 VAL A 116 REMARK 465 ALA A 117 REMARK 465 GLU A 118 REMARK 465 PRO A 119 REMARK 465 PRO A 120 REMARK 465 PHE A 121 REMARK 465 LYS A 122 REMARK 465 ASN A 123 REMARK 465 PRO A 213 REMARK 465 VAL A 214 REMARK 465 LYS A 215 REMARK 465 ALA A 216 REMARK 465 ASP A 217 REMARK 465 LEU A 218 REMARK 465 GLU A 219 REMARK 465 HIS A 220 REMARK 465 HIS A 221 REMARK 465 HIS A 222 REMARK 465 HIS A 223 REMARK 465 HIS A 224 REMARK 465 HIS A 225 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 158 -157.52 -161.48 REMARK 500 1 LYS A 184 165.08 83.33 REMARK 500 2 GLN A 132 78.88 -112.83 REMARK 500 2 HIS A 159 78.28 -116.28 REMARK 500 2 SER A 181 142.45 -171.95 REMARK 500 3 SER A 135 -168.22 -115.22 REMARK 500 4 SER A 181 -158.77 -163.36 REMARK 500 4 THR A 199 -169.45 -124.71 REMARK 500 4 SER A 201 118.32 -160.22 REMARK 500 5 PRO A 166 78.24 -65.37 REMARK 500 5 SER A 181 142.23 -172.64 REMARK 500 6 LYS A 147 11.56 -145.79 REMARK 500 6 SER A 181 -157.52 -164.51 REMARK 500 6 ALA A 206 73.77 -150.09 REMARK 500 7 SER A 181 142.13 -173.90 REMARK 500 7 ALA A 206 70.39 -152.80 REMARK 500 8 VAL A 150 -64.89 -108.95 REMARK 500 8 SER A 158 -161.49 -119.06 REMARK 500 8 SER A 181 143.63 -171.36 REMARK 500 8 SER A 201 143.65 -171.50 REMARK 500 8 ALA A 206 73.96 -150.74 REMARK 500 10 GLN A 125 54.28 -140.29 REMARK 500 10 LYS A 126 125.41 -170.23 REMARK 500 10 PRO A 166 80.15 -63.10 REMARK 500 10 SER A 181 -157.75 -163.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30450 RELATED DB: BMRB REMARK 900 RELATED ID: 6CZT RELATED DB: PDB REMARK 900 RELATED ID: SASDDX5 RELATED DB: SASBDB DBREF 6D10 A 31 217 UNP Q06062 ALGF_PSEAE 30 216 SEQADV 6D10 MET A 30 UNP Q06062 INITIATING METHIONINE SEQADV 6D10 LEU A 218 UNP Q06062 EXPRESSION TAG SEQADV 6D10 GLU A 219 UNP Q06062 EXPRESSION TAG SEQADV 6D10 HIS A 220 UNP Q06062 EXPRESSION TAG SEQADV 6D10 HIS A 221 UNP Q06062 EXPRESSION TAG SEQADV 6D10 HIS A 222 UNP Q06062 EXPRESSION TAG SEQADV 6D10 HIS A 223 UNP Q06062 EXPRESSION TAG SEQADV 6D10 HIS A 224 UNP Q06062 EXPRESSION TAG SEQADV 6D10 HIS A 225 UNP Q06062 EXPRESSION TAG SEQRES 1 A 196 MET GLU GLY ALA LEU TYR GLY PRO GLN ALA PRO LYS GLY SEQRES 2 A 196 SER ALA PHE VAL ARG ALA TYR ASN ALA GLY ASN SER GLU SEQRES 3 A 196 LEU ASP VAL SER VAL GLY SER THR SER LEU ASN ASP VAL SEQRES 4 A 196 ALA PRO LEU GLY SER SER ASP PHE LYS PHE LEU PRO PRO SEQRES 5 A 196 GLY SER TYR THR ALA GLN VAL GLY GLN GLN SER LEU PRO SEQRES 6 A 196 VAL LYS LEU ASP PRO ASP SER TYR TYR THR LEU VAL SER SEQRES 7 A 196 GLN PRO GLY GLY LYS PRO GLN LEU VAL ALA GLU PRO PRO SEQRES 8 A 196 PHE LYS ASN LYS GLN LYS ALA LEU VAL ARG VAL GLN ASN SEQRES 9 A 196 LEU SER GLY SER LYS LEU THR LEU LYS THR ALA ASP GLY SEQRES 10 A 196 LYS THR ASP VAL VAL LYS ASP VAL GLY PRO GLN SER HIS SEQRES 11 A 196 GLY ASP ARG GLU ILE ASN PRO VAL LYS VAL ASN LEU ALA SEQRES 12 A 196 LEU PHE ASP GLY SER LYS LYS VAL SER ASP LEU LYS PRO SEQRES 13 A 196 VAL THR LEU ALA ARG GLY GLU VAL VAL CYS LEU TYR VAL SEQRES 14 A 196 THR GLY SER GLY GLY LYS LEU ALA PRO VAL TRP VAL LYS SEQRES 15 A 196 ARG PRO VAL LYS ALA ASP LEU GLU HIS HIS HIS HIS HIS SEQRES 16 A 196 HIS SHEET 1 AA1 4 HIS A 159 ILE A 164 0 SHEET 2 AA1 4 ALA A 127 LEU A 134 -1 N ALA A 127 O ILE A 164 SHEET 3 AA1 4 VAL A 193 SER A 201 1 O LEU A 196 N GLN A 132 SHEET 4 AA1 4 LYS A 204 LYS A 211 -1 O VAL A 210 N CYS A 195 SHEET 1 AA2 3 THR A 140 LYS A 142 0 SHEET 2 AA2 3 LYS A 168 ASP A 175 -1 O PHE A 174 N THR A 140 SHEET 3 AA2 3 LYS A 178 THR A 187 -1 O VAL A 180 N LEU A 173 CISPEP 1 GLY A 202 GLY A 203 2 5.66 CISPEP 2 GLY A 202 GLY A 203 9 7.12 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1