data_6D2U
# 
_entry.id   6D2U 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.381 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   6D2U         pdb_00006d2u 10.2210/pdb6d2u/pdb 
WWPDB D_1000233920 ?            ?                   
BMRB  30452        ?            ?                   
# 
_pdbx_database_related.db_name        BMRB 
_pdbx_database_related.details        'Solution structure of a ultra-high affinity macrocycle bound to HIV-1 TAR RNA' 
_pdbx_database_related.db_id          30452 
_pdbx_database_related.content_type   unspecified 
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.status_code_sf                  ? 
_pdbx_database_status.status_code_mr                  REL 
_pdbx_database_status.entry_id                        6D2U 
_pdbx_database_status.recvd_initial_deposition_date   2018-04-13 
_pdbx_database_status.SG_entry                        N 
_pdbx_database_status.deposit_site                    RCSB 
_pdbx_database_status.process_site                    RCSB 
_pdbx_database_status.status_code_cs                  REL 
_pdbx_database_status.methods_development_category    ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_nmr_data            REL 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
_audit_author.identifier_ORCID 
'Shortridge, M.D.' 1 0000-0003-2825-6836 
'Varani, G.'       2 ?                   
# 
_citation.abstract                  ? 
_citation.abstract_id_CAS           ? 
_citation.book_id_ISBN              ? 
_citation.book_publisher            ? 
_citation.book_publisher_city       ? 
_citation.book_title                ? 
_citation.coordinate_linkage        ? 
_citation.country                   UK 
_citation.database_id_Medline       ? 
_citation.details                   ? 
_citation.id                        primary 
_citation.journal_abbrev            'Nucleic Acids Res.' 
_citation.journal_id_ASTM           NARHAD 
_citation.journal_id_CSD            0389 
_citation.journal_id_ISSN           1362-4962 
_citation.journal_full              ? 
_citation.journal_issue             ? 
_citation.journal_volume            47 
_citation.language                  ? 
_citation.page_first                1523 
_citation.page_last                 1531 
_citation.title                     'An ultra-high affinity ligand of HIV-1 TAR reveals the RNA structure recognized by P-TEFb.' 
_citation.year                      2019 
_citation.database_id_CSD           ? 
_citation.pdbx_database_id_DOI      10.1093/nar/gky1197 
_citation.pdbx_database_id_PubMed   30481318 
_citation.unpublished_flag          ? 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Shortridge, M.D.' 1 ? 
primary 'Wille, P.T.'      2 ? 
primary 'Jones, A.N.'      3 ? 
primary 'Davidson, A.'     4 ? 
primary 'Bogdanovic, J.'   5 ? 
primary 'Arts, E.'         6 ? 
primary 'Karn, J.'         7 ? 
primary 'Robinson, J.A.'   8 ? 
primary 'Varani, G.'       9 ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer man DAB-VAL-ARG-THR-ARG-LYS-GLY-ARG-ARG-ILE-NOR-ILE-DPR-PRO 1697.087 1 ? ? ? ? 
2 polymer man 'RNA (29-MER)'                                          9307.555 1 ? ? ? ? 
# 
loop_
_entity_poly.entity_id 
_entity_poly.type 
_entity_poly.nstd_linkage 
_entity_poly.nstd_monomer 
_entity_poly.pdbx_seq_one_letter_code 
_entity_poly.pdbx_seq_one_letter_code_can 
_entity_poly.pdbx_strand_id 
_entity_poly.pdbx_target_identifier 
1 'polypeptide(L)'   no yes '(DAB)VRTRKGRRI(4J5)I(DPR)P'  AVRTRKGRRIXIPP                A ? 
2 polyribonucleotide no no  GGCAGAUCUGAGCCUGGGAGCUCUCUGCC GGCAGAUCUGAGCCUGGGAGCUCUCUGCC B ? 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  DAB n 
1 2  VAL n 
1 3  ARG n 
1 4  THR n 
1 5  ARG n 
1 6  LYS n 
1 7  GLY n 
1 8  ARG n 
1 9  ARG n 
1 10 ILE n 
1 11 4J5 n 
1 12 ILE n 
1 13 DPR n 
1 14 PRO n 
2 1  G   n 
2 2  G   n 
2 3  C   n 
2 4  A   n 
2 5  G   n 
2 6  A   n 
2 7  U   n 
2 8  C   n 
2 9  U   n 
2 10 G   n 
2 11 A   n 
2 12 G   n 
2 13 C   n 
2 14 C   n 
2 15 U   n 
2 16 G   n 
2 17 G   n 
2 18 G   n 
2 19 A   n 
2 20 G   n 
2 21 C   n 
2 22 U   n 
2 23 C   n 
2 24 U   n 
2 25 C   n 
2 26 U   n 
2 27 G   n 
2 28 C   n 
2 29 C   n 
# 
loop_
_entity_src_gen.entity_id 
_entity_src_gen.pdbx_src_id 
_entity_src_gen.pdbx_alt_source_flag 
_entity_src_gen.pdbx_seq_type 
_entity_src_gen.pdbx_beg_seq_num 
_entity_src_gen.pdbx_end_seq_num 
_entity_src_gen.gene_src_common_name 
_entity_src_gen.gene_src_genus 
_entity_src_gen.pdbx_gene_src_gene 
_entity_src_gen.gene_src_species 
_entity_src_gen.gene_src_strain 
_entity_src_gen.gene_src_tissue 
_entity_src_gen.gene_src_tissue_fraction 
_entity_src_gen.gene_src_details 
_entity_src_gen.pdbx_gene_src_fragment 
_entity_src_gen.pdbx_gene_src_scientific_name 
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 
_entity_src_gen.pdbx_gene_src_variant 
_entity_src_gen.pdbx_gene_src_cell_line 
_entity_src_gen.pdbx_gene_src_atcc 
_entity_src_gen.pdbx_gene_src_organ 
_entity_src_gen.pdbx_gene_src_organelle 
_entity_src_gen.pdbx_gene_src_cell 
_entity_src_gen.pdbx_gene_src_cellular_location 
_entity_src_gen.host_org_common_name 
_entity_src_gen.pdbx_host_org_scientific_name 
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 
_entity_src_gen.host_org_genus 
_entity_src_gen.pdbx_host_org_gene 
_entity_src_gen.pdbx_host_org_organ 
_entity_src_gen.host_org_species 
_entity_src_gen.pdbx_host_org_tissue 
_entity_src_gen.pdbx_host_org_tissue_fraction 
_entity_src_gen.pdbx_host_org_strain 
_entity_src_gen.pdbx_host_org_variant 
_entity_src_gen.pdbx_host_org_cell_line 
_entity_src_gen.pdbx_host_org_atcc 
_entity_src_gen.pdbx_host_org_culture_collection 
_entity_src_gen.pdbx_host_org_cell 
_entity_src_gen.pdbx_host_org_organelle 
_entity_src_gen.pdbx_host_org_cellular_location 
_entity_src_gen.pdbx_host_org_vector_type 
_entity_src_gen.pdbx_host_org_vector 
_entity_src_gen.host_org_details 
_entity_src_gen.expression_system_id 
_entity_src_gen.plasmid_name 
_entity_src_gen.plasmid_details 
_entity_src_gen.pdbx_description 
1 1 sample 'Biological sequence' 1 14 ? ? ? ? ? ? ? ? ? 'synthetic construct' 32630 ? ? ? ? ? ? ? ? 'synthetic construct' 32630 ? 
? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
2 1 sample 'Biological sequence' 1 29 ? ? ? ? ? ? ? ? ? 'synthetic construct' 32630 ? ? ? ? ? ? ? ? 'synthetic construct' 32630 ? 
? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
# 
loop_
_struct_ref.id 
_struct_ref.db_name 
_struct_ref.db_code 
_struct_ref.pdbx_db_accession 
_struct_ref.pdbx_db_isoform 
_struct_ref.entity_id 
_struct_ref.pdbx_seq_one_letter_code 
_struct_ref.pdbx_align_begin 
1 PDB 6D2U 6D2U ? 1 ? 1 
2 PDB 6D2U 6D2U ? 2 ? 1 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 6D2U A 1 ? 14 ? 6D2U 1  ? 14 ? 1  14 
2 2 6D2U B 1 ? 29 ? 6D2U 17 ? 45 ? 17 45 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
4J5 'L-peptide linking' n 'amino{[(3S)-3-amino-3-carboxypropyl]amino}methaniminium' ? 'C5 H13 N4 O2 1'  161.182 
A   'RNA linking'       y "ADENOSINE-5'-MONOPHOSPHATE"                              ? 'C10 H14 N5 O7 P' 347.221 
ARG 'L-peptide linking' y ARGININE                                                  ? 'C6 H15 N4 O2 1'  175.209 
C   'RNA linking'       y "CYTIDINE-5'-MONOPHOSPHATE"                               ? 'C9 H14 N3 O8 P'  323.197 
DAB 'L-peptide linking' n '2,4-DIAMINOBUTYRIC ACID'                                 ? 'C4 H10 N2 O2'    118.134 
DPR 'D-peptide linking' . D-PROLINE                                                 ? 'C5 H9 N O2'      115.130 
G   'RNA linking'       y "GUANOSINE-5'-MONOPHOSPHATE"                              ? 'C10 H14 N5 O8 P' 363.221 
GLY 'peptide linking'   y GLYCINE                                                   ? 'C2 H5 N O2'      75.067  
ILE 'L-peptide linking' y ISOLEUCINE                                                ? 'C6 H13 N O2'     131.173 
LYS 'L-peptide linking' y LYSINE                                                    ? 'C6 H15 N2 O2 1'  147.195 
PRO 'L-peptide linking' y PROLINE                                                   ? 'C5 H9 N O2'      115.130 
THR 'L-peptide linking' y THREONINE                                                 ? 'C4 H9 N O3'      119.119 
U   'RNA linking'       y "URIDINE-5'-MONOPHOSPHATE"                                ? 'C9 H13 N2 O9 P'  324.181 
VAL 'L-peptide linking' y VALINE                                                    ? 'C5 H11 N O2'     117.146 
# 
loop_
_pdbx_nmr_exptl.experiment_id 
_pdbx_nmr_exptl.conditions_id 
_pdbx_nmr_exptl.solution_id 
_pdbx_nmr_exptl.type 
_pdbx_nmr_exptl.spectrometer_id 
_pdbx_nmr_exptl.sample_state 
1 1 3 '2D 1H-15N HSQC'  3 isotropic 
2 2 2 '2D 1H-1H TOCSY'  3 isotropic 
3 1 1 '2D 1H-1H NOESY'  3 isotropic 
4 2 2 '2D 1H-1H NOESY'  3 isotropic 
5 2 4 '2D 1H-13C HSQC'  3 isotropic 
6 1 3 '3D 1H-15N NOESY' 3 isotropic 
7 2 4 '3D 1H-13C NOESY' 3 isotropic 
# 
loop_
_pdbx_nmr_exptl_sample_conditions.conditions_id 
_pdbx_nmr_exptl_sample_conditions.temperature 
_pdbx_nmr_exptl_sample_conditions.pressure_units 
_pdbx_nmr_exptl_sample_conditions.pressure 
_pdbx_nmr_exptl_sample_conditions.pH 
_pdbx_nmr_exptl_sample_conditions.ionic_strength 
_pdbx_nmr_exptl_sample_conditions.details 
_pdbx_nmr_exptl_sample_conditions.ionic_strength_err 
_pdbx_nmr_exptl_sample_conditions.ionic_strength_units 
_pdbx_nmr_exptl_sample_conditions.label 
_pdbx_nmr_exptl_sample_conditions.pH_err 
_pdbx_nmr_exptl_sample_conditions.pH_units 
_pdbx_nmr_exptl_sample_conditions.pressure_err 
_pdbx_nmr_exptl_sample_conditions.temperature_err 
_pdbx_nmr_exptl_sample_conditions.temperature_units 
1 277 atm 1 6.5 '10 mM NaCl, 20mM Na Phosphate' 
'Low temp sample conditions to record exchangeable proton information (imino, amino)'                ? mM low_temp  ? pH ? ? K 
2 303 atm 1 6.5 '10 mM NaCl, 20mM Na Phosphate' 
'high temp sample conditions to record difference in exchangeable proton information (imino, amino)' ? mM high_temp ? pH ? ? K 
# 
loop_
_pdbx_nmr_sample_details.solution_id 
_pdbx_nmr_sample_details.contents 
_pdbx_nmr_sample_details.solvent_system 
_pdbx_nmr_sample_details.label 
_pdbx_nmr_sample_details.type 
_pdbx_nmr_sample_details.details 
1 
;1.7 mM DAB-VAL-ARG-THR-ARG-LYS-GLY-ARG-ARG-ILE-NOR-ILE-DPR-PRO, 1.2 mM RNA (29-MER), 0.01 mM EDTA, 20 mM potassium phosphate, 10 mM sodium chloride, 95% H2O/5% D2O
;
'95% H2O/5% D2O' '1H Peptide/1H RNA H2O'       solution 
'Sample conditions to record exchangeable proton distance information (imino, amino).  300uL volume in shigemi nmr tube.' 
2 
;1.7 mM DAB-VAL-ARG-THR-ARG-LYS-GLY-ARG-ARG-ILE-NOR-ILE-DPR-PRO, 1.2 mM RNA (29-MER), 0.01 mM EDTA, 20 mM potassium phosphate, 10 mM sodium chloride, 100% D2O
;
'100% D2O'       '1H Peptide/1H RNA D2O'       solution 
;Sample conditions to record non-exchangeable proton distance information.  Same sample as id#1 lyophylized down and redissolved in 100% D2O
;
3 
;1.5 mM DAB-VAL-ARG-THR-ARG-LYS-GLY-ARG-ARG-ILE-NOR-ILE-DPR-PRO, 1.0 mM [U-99% 13C; U-99% 15N] RNA (29-MER), 0.01 mM EDTA, 20 mM potassium phosphate, 10 mM sodium chloride, 95% H2O/5% D2O
;
'95% H2O/5% D2O' '1H Peptide/ 13C/15N RNA H2O' solution 
'Sample conditions to record exchangeable proton distance information (imino, amino).  300uL volume in shigemi nmr tube.' 
4 
;1.5 mM DAB-VAL-ARG-THR-ARG-LYS-GLY-ARG-ARG-ILE-NOR-ILE-DPR-PRO, 1.0 mM [U-99% 13C; U-99% 15N] RNA (29-MER), 0.01 mM EDTA, 20 mM potassium phosphate, 10 mM sodium chloride, 100% D2O
;
'100% D2O'       '1H Peptide/ 13C/15N RNA D2O' solution 
;Sample conditions to record non-exchangeable proton distance information.  Same sample as id#3 lyophylized down and redissolved in 100% D2O
;
# 
loop_
_pdbx_nmr_spectrometer.spectrometer_id 
_pdbx_nmr_spectrometer.model 
_pdbx_nmr_spectrometer.type 
_pdbx_nmr_spectrometer.manufacturer 
_pdbx_nmr_spectrometer.field_strength 
_pdbx_nmr_spectrometer.details 
1 DRX          ? Bruker 500 'TCI cryoprobe' 
2 'AVANCE II'  ? Bruker 600 'TCI cryoprobe' 
3 'AVANCE III' ? Bruker 800 'TCI cryoprobe' 
# 
_pdbx_nmr_refine.entry_id           6D2U 
_pdbx_nmr_refine.method             'simulated annealing' 
_pdbx_nmr_refine.details            ? 
_pdbx_nmr_refine.software_ordinal   1 
# 
_pdbx_nmr_ensemble.entry_id                                      6D2U 
_pdbx_nmr_ensemble.conformers_calculated_total_number            200 
_pdbx_nmr_ensemble.conformers_submitted_total_number             10 
_pdbx_nmr_ensemble.conformer_selection_criteria                  'structures with the lowest energy' 
_pdbx_nmr_ensemble.representative_conformer                      ? 
_pdbx_nmr_ensemble.average_constraints_per_residue               ? 
_pdbx_nmr_ensemble.average_constraint_violations_per_residue     ? 
_pdbx_nmr_ensemble.maximum_distance_constraint_violation         ? 
_pdbx_nmr_ensemble.average_distance_constraint_violation         ? 
_pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation   ? 
_pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation   ? 
_pdbx_nmr_ensemble.distance_constraint_violation_method          ? 
_pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation    ? 
_pdbx_nmr_ensemble.average_torsion_angle_constraint_violation    ? 
_pdbx_nmr_ensemble.torsion_angle_constraint_violation_method     ? 
# 
_pdbx_nmr_representative.entry_id             6D2U 
_pdbx_nmr_representative.conformer_id         1 
_pdbx_nmr_representative.selection_criteria   'lowest energy' 
# 
loop_
_pdbx_nmr_software.ordinal 
_pdbx_nmr_software.classification 
_pdbx_nmr_software.name 
_pdbx_nmr_software.version 
_pdbx_nmr_software.authors 
1 refinement                  'X-PLOR NIH' ? 'Schwieters, Kuszewski, Tjandra and Clore' 
2 'structure calculation'     'X-PLOR NIH' ? 'Schwieters, Kuszewski, Tjandra and Clore' 
3 'chemical shift assignment' Sparky       ? Goddard                                    
4 'peak picking'              Sparky       ? Goddard                                    
# 
_exptl.absorpt_coefficient_mu     ? 
_exptl.absorpt_correction_T_max   ? 
_exptl.absorpt_correction_T_min   ? 
_exptl.absorpt_correction_type    ? 
_exptl.absorpt_process_details    ? 
_exptl.entry_id                   6D2U 
_exptl.crystals_number            ? 
_exptl.details                    ? 
_exptl.method                     'SOLUTION NMR' 
_exptl.method_details             ? 
# 
_struct.entry_id                     6D2U 
_struct.title                        'Solution structure of a ultra-high affinity macrocycle bound to HIV-1 TAR RNA' 
_struct.pdbx_model_details           ? 
_struct.pdbx_formula_weight          ? 
_struct.pdbx_formula_weight_method   ? 
_struct.pdbx_model_type_details      ? 
_struct.pdbx_CASP_flag               N 
# 
_struct_keywords.entry_id        6D2U 
_struct_keywords.text            'Macrocycle inhibitor, complex, HIV-1 TAR, Tat, P-TEFb, RNA, Peptide-RNA complex' 
_struct_keywords.pdbx_keywords   Peptide/RNA 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 2 ? 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
covale1  covale both ? A DAB 1  C  ? ? ? 1_555 A VAL 2  N  ? ? A DAB 1  A VAL 2  1_555 ? ? ? ? ? ? ?            1.341 ? ? 
covale2  covale both ? A DAB 1  N  ? ? ? 1_555 A PRO 14 C  ? ? A DAB 1  A PRO 14 1_555 ? ? ? ? ? ? ?            1.333 ? ? 
covale3  covale both ? A ILE 10 C  ? ? ? 1_555 A 4J5 11 N  ? ? A ILE 10 A 4J5 11 1_555 ? ? ? ? ? ? ?            1.327 ? ? 
covale4  covale both ? A 4J5 11 C  ? ? ? 1_555 A ILE 12 N  ? ? A 4J5 11 A ILE 12 1_555 ? ? ? ? ? ? ?            1.324 ? ? 
covale5  covale both ? A ILE 12 C  ? ? ? 1_555 A DPR 13 N  ? ? A ILE 12 A DPR 13 1_555 ? ? ? ? ? ? ?            1.319 ? ? 
covale6  covale both ? A DPR 13 C  ? ? ? 1_555 A PRO 14 N  ? ? A DPR 13 A PRO 14 1_555 ? ? ? ? ? ? ?            1.327 ? ? 
hydrog1  hydrog ?    ? B G   1  N1 ? ? ? 1_555 B C   29 N3 ? ? B G   17 B C   45 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog2  hydrog ?    ? B G   1  N2 ? ? ? 1_555 B C   29 O2 ? ? B G   17 B C   45 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog3  hydrog ?    ? B G   1  O6 ? ? ? 1_555 B C   29 N4 ? ? B G   17 B C   45 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog4  hydrog ?    ? B G   2  N1 ? ? ? 1_555 B C   28 N3 ? ? B G   18 B C   44 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog5  hydrog ?    ? B G   2  N2 ? ? ? 1_555 B C   28 O2 ? ? B G   18 B C   44 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog6  hydrog ?    ? B G   2  O6 ? ? ? 1_555 B C   28 N4 ? ? B G   18 B C   44 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog7  hydrog ?    ? B C   3  N3 ? ? ? 1_555 B G   27 N1 ? ? B C   19 B G   43 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog8  hydrog ?    ? B C   3  N4 ? ? ? 1_555 B G   27 O6 ? ? B C   19 B G   43 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog9  hydrog ?    ? B C   3  O2 ? ? ? 1_555 B G   27 N2 ? ? B C   19 B G   43 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog10 hydrog ?    ? B A   4  N1 ? ? ? 1_555 B U   26 N3 ? ? B A   20 B U   42 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog11 hydrog ?    ? B A   4  N6 ? ? ? 1_555 B U   26 O4 ? ? B A   20 B U   42 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog12 hydrog ?    ? B G   5  N1 ? ? ? 1_555 B C   25 N3 ? ? B G   21 B C   41 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog13 hydrog ?    ? B G   5  N2 ? ? ? 1_555 B C   25 O2 ? ? B G   21 B C   41 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog14 hydrog ?    ? B G   5  O6 ? ? ? 1_555 B C   25 N4 ? ? B G   21 B C   41 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog15 hydrog ?    ? B A   6  N1 ? ? ? 1_555 B U   24 N3 ? ? B A   22 B U   40 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog16 hydrog ?    ? B A   6  N6 ? ? ? 1_555 B U   24 O4 ? ? B A   22 B U   40 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog17 hydrog ?    ? B U   7  N3 ? ? ? 1_555 B A   11 N7 ? ? B U   23 B A   27 1_555 ? ? ? ? ? ? HOOGSTEEN    ?     ? ? 
hydrog18 hydrog ?    ? B U   7  O4 ? ? ? 1_555 B A   11 N6 ? ? B U   23 B A   27 1_555 ? ? ? ? ? ? HOOGSTEEN    ?     ? ? 
hydrog19 hydrog ?    ? B G   10 N1 ? ? ? 1_555 B C   23 N3 ? ? B G   26 B C   39 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog20 hydrog ?    ? B G   10 N2 ? ? ? 1_555 B C   23 O2 ? ? B G   26 B C   39 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog21 hydrog ?    ? B G   10 O6 ? ? ? 1_555 B C   23 N4 ? ? B G   26 B C   39 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog22 hydrog ?    ? B A   11 N1 ? ? ? 1_555 B U   22 N3 ? ? B A   27 B U   38 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog23 hydrog ?    ? B A   11 N6 ? ? ? 1_555 B U   22 O4 ? ? B A   27 B U   38 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog24 hydrog ?    ? B G   12 N1 ? ? ? 1_555 B C   21 N3 ? ? B G   28 B C   37 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog25 hydrog ?    ? B G   12 N2 ? ? ? 1_555 B C   21 O2 ? ? B G   28 B C   37 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog26 hydrog ?    ? B G   12 O6 ? ? ? 1_555 B C   21 N4 ? ? B G   28 B C   37 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog27 hydrog ?    ? B C   13 N3 ? ? ? 1_555 B G   20 N1 ? ? B C   29 B G   36 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog28 hydrog ?    ? B C   13 N4 ? ? ? 1_555 B G   20 O6 ? ? B C   29 B G   36 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog29 hydrog ?    ? B C   13 O2 ? ? ? 1_555 B G   20 N2 ? ? B C   29 B G   36 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog30 hydrog ?    ? B C   14 N3 ? ? ? 1_555 B G   18 N1 ? ? B C   30 B G   34 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog31 hydrog ?    ? B C   14 N4 ? ? ? 1_555 B G   18 O6 ? ? B C   30 B G   34 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog32 hydrog ?    ? B C   14 O2 ? ? ? 1_555 B G   18 N2 ? ? B C   30 B G   34 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
# 
loop_
_struct_conn_type.id 
_struct_conn_type.criteria 
_struct_conn_type.reference 
covale ? ? 
hydrog ? ? 
# 
_struct_sheet.id               AA1 
_struct_sheet.type             ? 
_struct_sheet.number_strands   2 
_struct_sheet.details          ? 
# 
_struct_sheet_order.sheet_id     AA1 
_struct_sheet_order.range_id_1   1 
_struct_sheet_order.range_id_2   2 
_struct_sheet_order.offset       ? 
_struct_sheet_order.sense        anti-parallel 
# 
loop_
_struct_sheet_range.sheet_id 
_struct_sheet_range.id 
_struct_sheet_range.beg_label_comp_id 
_struct_sheet_range.beg_label_asym_id 
_struct_sheet_range.beg_label_seq_id 
_struct_sheet_range.pdbx_beg_PDB_ins_code 
_struct_sheet_range.end_label_comp_id 
_struct_sheet_range.end_label_asym_id 
_struct_sheet_range.end_label_seq_id 
_struct_sheet_range.pdbx_end_PDB_ins_code 
_struct_sheet_range.beg_auth_comp_id 
_struct_sheet_range.beg_auth_asym_id 
_struct_sheet_range.beg_auth_seq_id 
_struct_sheet_range.end_auth_comp_id 
_struct_sheet_range.end_auth_asym_id 
_struct_sheet_range.end_auth_seq_id 
AA1 1 VAL A 2 ? ARG A 5  ? VAL A 2 ARG A 5  
AA1 2 ARG A 8 ? 4J5 A 11 ? ARG A 8 4J5 A 11 
# 
_pdbx_struct_sheet_hbond.sheet_id                AA1 
_pdbx_struct_sheet_hbond.range_id_1              1 
_pdbx_struct_sheet_hbond.range_id_2              2 
_pdbx_struct_sheet_hbond.range_1_label_atom_id   N 
_pdbx_struct_sheet_hbond.range_1_label_comp_id   ARG 
_pdbx_struct_sheet_hbond.range_1_label_asym_id   A 
_pdbx_struct_sheet_hbond.range_1_label_seq_id    5 
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code    ? 
_pdbx_struct_sheet_hbond.range_1_auth_atom_id    N 
_pdbx_struct_sheet_hbond.range_1_auth_comp_id    ARG 
_pdbx_struct_sheet_hbond.range_1_auth_asym_id    A 
_pdbx_struct_sheet_hbond.range_1_auth_seq_id     5 
_pdbx_struct_sheet_hbond.range_2_label_atom_id   O 
_pdbx_struct_sheet_hbond.range_2_label_comp_id   ARG 
_pdbx_struct_sheet_hbond.range_2_label_asym_id   A 
_pdbx_struct_sheet_hbond.range_2_label_seq_id    8 
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code    ? 
_pdbx_struct_sheet_hbond.range_2_auth_atom_id    O 
_pdbx_struct_sheet_hbond.range_2_auth_comp_id    ARG 
_pdbx_struct_sheet_hbond.range_2_auth_asym_id    A 
_pdbx_struct_sheet_hbond.range_2_auth_seq_id     8 
# 
_atom_sites.entry_id                    6D2U 
_atom_sites.fract_transf_matrix[1][1]   1.000000 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   1.000000 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   1.000000 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C 
H 
N 
O 
P 
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  DAB 1  1  1  DAB DAB A . n 
A 1 2  VAL 2  2  2  VAL VAL A . n 
A 1 3  ARG 3  3  3  ARG ARG A . n 
A 1 4  THR 4  4  4  THR THR A . n 
A 1 5  ARG 5  5  5  ARG ARG A . n 
A 1 6  LYS 6  6  6  LYS LYS A . n 
A 1 7  GLY 7  7  7  GLY GLY A . n 
A 1 8  ARG 8  8  8  ARG ARG A . n 
A 1 9  ARG 9  9  9  ARG ARG A . n 
A 1 10 ILE 10 10 10 ILE ILE A . n 
A 1 11 4J5 11 11 11 4J5 NOR A . n 
A 1 12 ILE 12 12 12 ILE ILE A . n 
A 1 13 DPR 13 13 13 DPR DPR A . n 
A 1 14 PRO 14 14 14 PRO PRO A . n 
B 2 1  G   1  17 17 G   G   B . n 
B 2 2  G   2  18 18 G   G   B . n 
B 2 3  C   3  19 19 C   C   B . n 
B 2 4  A   4  20 20 A   A   B . n 
B 2 5  G   5  21 21 G   G   B . n 
B 2 6  A   6  22 22 A   A   B . n 
B 2 7  U   7  23 23 U   U   B . n 
B 2 8  C   8  24 24 C   C   B . n 
B 2 9  U   9  25 25 U   U   B . n 
B 2 10 G   10 26 26 G   G   B . n 
B 2 11 A   11 27 27 A   A   B . n 
B 2 12 G   12 28 28 G   G   B . n 
B 2 13 C   13 29 29 C   C   B . n 
B 2 14 C   14 30 30 C   C   B . n 
B 2 15 U   15 31 31 U   U   B . n 
B 2 16 G   16 32 32 G   G   B . n 
B 2 17 G   17 33 33 G   G   B . n 
B 2 18 G   18 34 34 G   G   B . n 
B 2 19 A   19 35 35 A   A   B . n 
B 2 20 G   20 36 36 G   G   B . n 
B 2 21 C   21 37 37 C   C   B . n 
B 2 22 U   22 38 38 U   U   B . n 
B 2 23 C   23 39 39 C   C   B . n 
B 2 24 U   24 40 40 U   U   B . n 
B 2 25 C   25 41 41 C   C   B . n 
B 2 26 U   26 42 42 U   U   B . n 
B 2 27 G   27 43 43 G   G   B . n 
B 2 28 C   28 44 44 C   C   B . n 
B 2 29 C   29 45 45 C   C   B . n 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_defined_assembly 
_pdbx_struct_assembly.method_details       ? 
_pdbx_struct_assembly.oligomeric_details   dimeric 
_pdbx_struct_assembly.oligomeric_count     2 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1 
_pdbx_struct_assembly_gen.asym_id_list      A,B 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   ? 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 2018-12-12 
2 'Structure model' 1 1 2019-07-03 
3 'Structure model' 1 2 2020-01-01 
4 'Structure model' 1 3 2023-06-14 
5 'Structure model' 1 4 2023-11-15 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Data collection'            
2 2 'Structure model' 'Database references'        
3 3 'Structure model' 'Author supporting evidence' 
4 4 'Structure model' 'Database references'        
5 4 'Structure model' 'Derived calculations'       
6 4 'Structure model' Other                        
7 5 'Structure model' 'Data collection'            
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 2 'Structure model' citation              
2 2 'Structure model' pdbx_nmr_software     
3 2 'Structure model' pdbx_nmr_spectrometer 
4 3 'Structure model' pdbx_audit_support    
5 4 'Structure model' database_2            
6 4 'Structure model' pdbx_database_status  
7 4 'Structure model' struct_conn           
8 5 'Structure model' chem_comp_atom        
9 5 'Structure model' chem_comp_bond        
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1  2 'Structure model' '_citation.journal_volume'                   
2  2 'Structure model' '_citation.page_first'                       
3  2 'Structure model' '_citation.page_last'                        
4  2 'Structure model' '_citation.year'                             
5  2 'Structure model' '_pdbx_nmr_software.name'                    
6  2 'Structure model' '_pdbx_nmr_spectrometer.model'               
7  3 'Structure model' '_pdbx_audit_support.funding_organization'   
8  4 'Structure model' '_database_2.pdbx_DOI'                       
9  4 'Structure model' '_database_2.pdbx_database_accession'        
10 4 'Structure model' '_pdbx_database_status.status_code_nmr_data' 
11 4 'Structure model' '_struct_conn.pdbx_dist_value'               
12 4 'Structure model' '_struct_conn.ptnr1_label_atom_id'           
13 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id'            
14 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id'             
15 4 'Structure model' '_struct_conn.ptnr2_label_atom_id'           
16 4 'Structure model' '_struct_conn.ptnr2_label_comp_id'           
17 4 'Structure model' '_struct_conn.ptnr2_label_seq_id'            
# 
loop_
_pdbx_nmr_exptl_sample.solution_id 
_pdbx_nmr_exptl_sample.component 
_pdbx_nmr_exptl_sample.concentration 
_pdbx_nmr_exptl_sample.concentration_range 
_pdbx_nmr_exptl_sample.concentration_units 
_pdbx_nmr_exptl_sample.isotopic_labeling 
1 DAB-VAL-ARG-THR-ARG-LYS-GLY-ARG-ARG-ILE-NOR-ILE-DPR-PRO 1.7  ? mM 'natural abundance'      
1 'RNA (29-MER)'                                          1.2  ? mM 'natural abundance'      
1 EDTA                                                    0.01 ? mM 'natural abundance'      
1 'potassium phosphate'                                   20   ? mM 'natural abundance'      
1 'sodium chloride'                                       10   ? mM 'natural abundance'      
2 DAB-VAL-ARG-THR-ARG-LYS-GLY-ARG-ARG-ILE-NOR-ILE-DPR-PRO 1.7  ? mM 'natural abundance'      
2 'RNA (29-MER)'                                          1.2  ? mM 'natural abundance'      
2 EDTA                                                    0.01 ? mM 'natural abundance'      
2 'potassium phosphate'                                   20   ? mM 'natural abundance'      
2 'sodium chloride'                                       10   ? mM 'natural abundance'      
3 DAB-VAL-ARG-THR-ARG-LYS-GLY-ARG-ARG-ILE-NOR-ILE-DPR-PRO 1.5  ? mM 'natural abundance'      
3 'RNA (29-MER)'                                          1.0  ? mM '[U-99% 13C; U-99% 15N]' 
3 EDTA                                                    0.01 ? mM 'natural abundance'      
3 'potassium phosphate'                                   20   ? mM 'natural abundance'      
3 'sodium chloride'                                       10   ? mM 'natural abundance'      
4 DAB-VAL-ARG-THR-ARG-LYS-GLY-ARG-ARG-ILE-NOR-ILE-DPR-PRO 1.5  ? mM 'natural abundance'      
4 'RNA (29-MER)'                                          1.0  ? mM '[U-99% 13C; U-99% 15N]' 
4 EDTA                                                    0.01 ? mM 'natural abundance'      
4 'potassium phosphate'                                   20   ? mM 'natural abundance'      
4 'sodium chloride'                                       10   ? mM 'natural abundance'      
# 
loop_
_pdbx_validate_close_contact.id 
_pdbx_validate_close_contact.PDB_model_num 
_pdbx_validate_close_contact.auth_atom_id_1 
_pdbx_validate_close_contact.auth_asym_id_1 
_pdbx_validate_close_contact.auth_comp_id_1 
_pdbx_validate_close_contact.auth_seq_id_1 
_pdbx_validate_close_contact.PDB_ins_code_1 
_pdbx_validate_close_contact.label_alt_id_1 
_pdbx_validate_close_contact.auth_atom_id_2 
_pdbx_validate_close_contact.auth_asym_id_2 
_pdbx_validate_close_contact.auth_comp_id_2 
_pdbx_validate_close_contact.auth_seq_id_2 
_pdbx_validate_close_contact.PDB_ins_code_2 
_pdbx_validate_close_contact.label_alt_id_2 
_pdbx_validate_close_contact.dist 
1  1  "O2'"  B U   23 ? ? "H1'" B U 25 ? ? 1.52 
2  2  "HO2'" B C   30 ? ? "O4'" B U 31 ? ? 1.48 
3  3  "HO2'" B G   33 ? ? "O5'" B G 34 ? ? 1.26 
4  3  "H5''" B C   24 ? ? "O4'" B U 25 ? ? 1.58 
5  3  "O3'"  B G   33 ? ? H22   B G 34 ? ? 1.58 
6  3  "HO2'" B U   25 ? ? "O5'" B G 26 ? ? 1.60 
7  4  "H5''" B G   34 ? ? "O4'" B G 36 ? ? 1.51 
8  4  "HO2'" B C   24 ? ? OP1   B U 25 ? ? 1.53 
9  4  "H4'"  B U   31 ? ? "O4'" B G 32 ? ? 1.54 
10 5  "O2'"  B U   23 ? ? "H1'" B U 25 ? ? 1.55 
11 6  "O3'"  B G   33 ? ? H22   B G 34 ? ? 1.33 
12 6  "HO2'" B G   32 ? ? "O5'" B G 33 ? ? 1.34 
13 6  "O2'"  B G   32 ? ? "H3'" B G 33 ? ? 1.57 
14 7  "O2'"  B G   33 ? ? "H3'" B G 34 ? ? 1.46 
15 7  "H5''" B C   24 ? ? "O4'" B U 25 ? ? 1.49 
16 7  "O3'"  B G   33 ? ? H22   B G 34 ? ? 1.55 
17 8  HH12   A ARG 8  ? ? H42   B C 30 ? ? 1.25 
18 8  HH21   A ARG 8  ? ? H22   B G 32 ? ? 1.28 
19 8  HH22   A ARG 8  ? ? H42   B C 30 ? ? 1.28 
20 8  "O2'"  B C   30 ? ? "H5'" B U 31 ? ? 1.47 
21 8  H6     B U   25 ? ? OP2   B A 27 ? ? 1.58 
22 9  "O2'"  B G   32 ? ? "H3'" B G 33 ? ? 1.53 
23 10 "HO2'" B G   33 ? ? "O5'" B G 34 ? ? 1.49 
24 10 "O2'"  B U   23 ? ? "H1'" B U 25 ? ? 1.54 
# 
_pdbx_validate_rmsd_angle.id                         1 
_pdbx_validate_rmsd_angle.PDB_model_num              8 
_pdbx_validate_rmsd_angle.auth_atom_id_1             C 
_pdbx_validate_rmsd_angle.auth_asym_id_1             A 
_pdbx_validate_rmsd_angle.auth_comp_id_1             ILE 
_pdbx_validate_rmsd_angle.auth_seq_id_1              12 
_pdbx_validate_rmsd_angle.PDB_ins_code_1             ? 
_pdbx_validate_rmsd_angle.label_alt_id_1             ? 
_pdbx_validate_rmsd_angle.auth_atom_id_2             N 
_pdbx_validate_rmsd_angle.auth_asym_id_2             A 
_pdbx_validate_rmsd_angle.auth_comp_id_2             DPR 
_pdbx_validate_rmsd_angle.auth_seq_id_2              13 
_pdbx_validate_rmsd_angle.PDB_ins_code_2             ? 
_pdbx_validate_rmsd_angle.label_alt_id_2             ? 
_pdbx_validate_rmsd_angle.auth_atom_id_3             CD 
_pdbx_validate_rmsd_angle.auth_asym_id_3             A 
_pdbx_validate_rmsd_angle.auth_comp_id_3             DPR 
_pdbx_validate_rmsd_angle.auth_seq_id_3              13 
_pdbx_validate_rmsd_angle.PDB_ins_code_3             ? 
_pdbx_validate_rmsd_angle.label_alt_id_3             ? 
_pdbx_validate_rmsd_angle.angle_value                114.12 
_pdbx_validate_rmsd_angle.angle_target_value         128.40 
_pdbx_validate_rmsd_angle.angle_deviation            -14.28 
_pdbx_validate_rmsd_angle.angle_standard_deviation   2.10 
_pdbx_validate_rmsd_angle.linker_flag                Y 
# 
loop_
_pdbx_validate_torsion.id 
_pdbx_validate_torsion.PDB_model_num 
_pdbx_validate_torsion.auth_comp_id 
_pdbx_validate_torsion.auth_asym_id 
_pdbx_validate_torsion.auth_seq_id 
_pdbx_validate_torsion.PDB_ins_code 
_pdbx_validate_torsion.label_alt_id 
_pdbx_validate_torsion.phi 
_pdbx_validate_torsion.psi 
1  1  LYS A 6  ? ? 9.23    59.96   
2  1  DPR A 13 ? ? 47.41   -97.78  
3  2  LYS A 6  ? ? 39.00   55.50   
4  2  DPR A 13 ? ? 49.71   -108.00 
5  3  LYS A 6  ? ? 1.95    71.12   
6  3  DPR A 13 ? ? 48.86   -107.46 
7  4  LYS A 6  ? ? -39.89  78.03   
8  4  ILE A 12 ? ? -109.54 78.76   
9  4  DPR A 13 ? ? 51.39   -106.79 
10 5  LYS A 6  ? ? -48.48  76.92   
11 5  ILE A 10 ? ? -129.94 -168.63 
12 5  DPR A 13 ? ? 25.33   -83.75  
13 6  LYS A 6  ? ? 13.03   73.81   
14 6  DPR A 13 ? ? 46.19   -105.16 
15 7  LYS A 6  ? ? -49.17  75.95   
16 7  DPR A 13 ? ? 45.20   -104.09 
17 8  LYS A 6  ? ? 29.29   78.76   
18 8  DPR A 13 ? ? 49.13   -107.31 
19 9  LYS A 6  ? ? -43.24  81.51   
20 9  DPR A 13 ? ? 46.55   -106.23 
21 10 LYS A 6  ? ? 33.79   73.03   
22 10 ILE A 12 ? ? -109.54 79.61   
23 10 DPR A 13 ? ? 49.85   -106.02 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
4J5 OXT    O N N 1   
4J5 C      C N N 2   
4J5 N      N N N 3   
4J5 O      O N N 4   
4J5 CA     C N S 5   
4J5 CB     C N N 6   
4J5 ND     N N N 7   
4J5 CE     C N N 8   
4J5 CG     C N N 9   
4J5 NH1    N N N 10  
4J5 NH2    N N N 11  
4J5 H      H N N 12  
4J5 HA     H N N 13  
4J5 HD     H N N 14  
4J5 HB2    H N N 15  
4J5 HB3    H N N 16  
4J5 HG2    H N N 17  
4J5 HG3    H N N 18  
4J5 HH11   H N N 19  
4J5 HH12   H N N 20  
4J5 HH21   H N N 21  
4J5 HH22   H N N 22  
4J5 H2     H N N 23  
4J5 HXT    H N N 24  
A   OP3    O N N 25  
A   P      P N N 26  
A   OP1    O N N 27  
A   OP2    O N N 28  
A   "O5'"  O N N 29  
A   "C5'"  C N N 30  
A   "C4'"  C N R 31  
A   "O4'"  O N N 32  
A   "C3'"  C N S 33  
A   "O3'"  O N N 34  
A   "C2'"  C N R 35  
A   "O2'"  O N N 36  
A   "C1'"  C N R 37  
A   N9     N Y N 38  
A   C8     C Y N 39  
A   N7     N Y N 40  
A   C5     C Y N 41  
A   C6     C Y N 42  
A   N6     N N N 43  
A   N1     N Y N 44  
A   C2     C Y N 45  
A   N3     N Y N 46  
A   C4     C Y N 47  
A   HOP3   H N N 48  
A   HOP2   H N N 49  
A   "H5'"  H N N 50  
A   "H5''" H N N 51  
A   "H4'"  H N N 52  
A   "H3'"  H N N 53  
A   "HO3'" H N N 54  
A   "H2'"  H N N 55  
A   "HO2'" H N N 56  
A   "H1'"  H N N 57  
A   H8     H N N 58  
A   H61    H N N 59  
A   H62    H N N 60  
A   H2     H N N 61  
ARG N      N N N 62  
ARG CA     C N S 63  
ARG C      C N N 64  
ARG O      O N N 65  
ARG CB     C N N 66  
ARG CG     C N N 67  
ARG CD     C N N 68  
ARG NE     N N N 69  
ARG CZ     C N N 70  
ARG NH1    N N N 71  
ARG NH2    N N N 72  
ARG OXT    O N N 73  
ARG H      H N N 74  
ARG H2     H N N 75  
ARG HA     H N N 76  
ARG HB2    H N N 77  
ARG HB3    H N N 78  
ARG HG2    H N N 79  
ARG HG3    H N N 80  
ARG HD2    H N N 81  
ARG HD3    H N N 82  
ARG HE     H N N 83  
ARG HH11   H N N 84  
ARG HH12   H N N 85  
ARG HH21   H N N 86  
ARG HH22   H N N 87  
ARG HXT    H N N 88  
C   OP3    O N N 89  
C   P      P N N 90  
C   OP1    O N N 91  
C   OP2    O N N 92  
C   "O5'"  O N N 93  
C   "C5'"  C N N 94  
C   "C4'"  C N R 95  
C   "O4'"  O N N 96  
C   "C3'"  C N S 97  
C   "O3'"  O N N 98  
C   "C2'"  C N R 99  
C   "O2'"  O N N 100 
C   "C1'"  C N R 101 
C   N1     N N N 102 
C   C2     C N N 103 
C   O2     O N N 104 
C   N3     N N N 105 
C   C4     C N N 106 
C   N4     N N N 107 
C   C5     C N N 108 
C   C6     C N N 109 
C   HOP3   H N N 110 
C   HOP2   H N N 111 
C   "H5'"  H N N 112 
C   "H5''" H N N 113 
C   "H4'"  H N N 114 
C   "H3'"  H N N 115 
C   "HO3'" H N N 116 
C   "H2'"  H N N 117 
C   "HO2'" H N N 118 
C   "H1'"  H N N 119 
C   H41    H N N 120 
C   H42    H N N 121 
C   H5     H N N 122 
C   H6     H N N 123 
DAB N      N N N 124 
DAB CA     C N S 125 
DAB C      C N N 126 
DAB O      O N N 127 
DAB CB     C N N 128 
DAB CG     C N N 129 
DAB ND     N N N 130 
DAB OXT    O N N 131 
DAB H      H N N 132 
DAB H2     H N N 133 
DAB HA     H N N 134 
DAB HB2    H N N 135 
DAB HB3    H N N 136 
DAB HG2    H N N 137 
DAB HG3    H N N 138 
DAB HD1    H N N 139 
DAB HD2    H N N 140 
DAB HXT    H N N 141 
DPR N      N N N 142 
DPR CA     C N R 143 
DPR CB     C N N 144 
DPR CG     C N N 145 
DPR CD     C N N 146 
DPR C      C N N 147 
DPR O      O N N 148 
DPR OXT    O N N 149 
DPR H      H N N 150 
DPR HA     H N N 151 
DPR HB2    H N N 152 
DPR HB3    H N N 153 
DPR HG2    H N N 154 
DPR HG3    H N N 155 
DPR HD2    H N N 156 
DPR HD3    H N N 157 
DPR HXT    H N N 158 
G   OP3    O N N 159 
G   P      P N N 160 
G   OP1    O N N 161 
G   OP2    O N N 162 
G   "O5'"  O N N 163 
G   "C5'"  C N N 164 
G   "C4'"  C N R 165 
G   "O4'"  O N N 166 
G   "C3'"  C N S 167 
G   "O3'"  O N N 168 
G   "C2'"  C N R 169 
G   "O2'"  O N N 170 
G   "C1'"  C N R 171 
G   N9     N Y N 172 
G   C8     C Y N 173 
G   N7     N Y N 174 
G   C5     C Y N 175 
G   C6     C N N 176 
G   O6     O N N 177 
G   N1     N N N 178 
G   C2     C N N 179 
G   N2     N N N 180 
G   N3     N N N 181 
G   C4     C Y N 182 
G   HOP3   H N N 183 
G   HOP2   H N N 184 
G   "H5'"  H N N 185 
G   "H5''" H N N 186 
G   "H4'"  H N N 187 
G   "H3'"  H N N 188 
G   "HO3'" H N N 189 
G   "H2'"  H N N 190 
G   "HO2'" H N N 191 
G   "H1'"  H N N 192 
G   H8     H N N 193 
G   H1     H N N 194 
G   H21    H N N 195 
G   H22    H N N 196 
GLY N      N N N 197 
GLY CA     C N N 198 
GLY C      C N N 199 
GLY O      O N N 200 
GLY OXT    O N N 201 
GLY H      H N N 202 
GLY H2     H N N 203 
GLY HA2    H N N 204 
GLY HA3    H N N 205 
GLY HXT    H N N 206 
ILE N      N N N 207 
ILE CA     C N S 208 
ILE C      C N N 209 
ILE O      O N N 210 
ILE CB     C N S 211 
ILE CG1    C N N 212 
ILE CG2    C N N 213 
ILE CD1    C N N 214 
ILE OXT    O N N 215 
ILE H      H N N 216 
ILE H2     H N N 217 
ILE HA     H N N 218 
ILE HB     H N N 219 
ILE HG12   H N N 220 
ILE HG13   H N N 221 
ILE HG21   H N N 222 
ILE HG22   H N N 223 
ILE HG23   H N N 224 
ILE HD11   H N N 225 
ILE HD12   H N N 226 
ILE HD13   H N N 227 
ILE HXT    H N N 228 
LYS N      N N N 229 
LYS CA     C N S 230 
LYS C      C N N 231 
LYS O      O N N 232 
LYS CB     C N N 233 
LYS CG     C N N 234 
LYS CD     C N N 235 
LYS CE     C N N 236 
LYS NZ     N N N 237 
LYS OXT    O N N 238 
LYS H      H N N 239 
LYS H2     H N N 240 
LYS HA     H N N 241 
LYS HB2    H N N 242 
LYS HB3    H N N 243 
LYS HG2    H N N 244 
LYS HG3    H N N 245 
LYS HD2    H N N 246 
LYS HD3    H N N 247 
LYS HE2    H N N 248 
LYS HE3    H N N 249 
LYS HZ1    H N N 250 
LYS HZ2    H N N 251 
LYS HZ3    H N N 252 
LYS HXT    H N N 253 
PRO N      N N N 254 
PRO CA     C N S 255 
PRO C      C N N 256 
PRO O      O N N 257 
PRO CB     C N N 258 
PRO CG     C N N 259 
PRO CD     C N N 260 
PRO OXT    O N N 261 
PRO H      H N N 262 
PRO HA     H N N 263 
PRO HB2    H N N 264 
PRO HB3    H N N 265 
PRO HG2    H N N 266 
PRO HG3    H N N 267 
PRO HD2    H N N 268 
PRO HD3    H N N 269 
PRO HXT    H N N 270 
THR N      N N N 271 
THR CA     C N S 272 
THR C      C N N 273 
THR O      O N N 274 
THR CB     C N R 275 
THR OG1    O N N 276 
THR CG2    C N N 277 
THR OXT    O N N 278 
THR H      H N N 279 
THR H2     H N N 280 
THR HA     H N N 281 
THR HB     H N N 282 
THR HG1    H N N 283 
THR HG21   H N N 284 
THR HG22   H N N 285 
THR HG23   H N N 286 
THR HXT    H N N 287 
U   OP3    O N N 288 
U   P      P N N 289 
U   OP1    O N N 290 
U   OP2    O N N 291 
U   "O5'"  O N N 292 
U   "C5'"  C N N 293 
U   "C4'"  C N R 294 
U   "O4'"  O N N 295 
U   "C3'"  C N S 296 
U   "O3'"  O N N 297 
U   "C2'"  C N R 298 
U   "O2'"  O N N 299 
U   "C1'"  C N R 300 
U   N1     N N N 301 
U   C2     C N N 302 
U   O2     O N N 303 
U   N3     N N N 304 
U   C4     C N N 305 
U   O4     O N N 306 
U   C5     C N N 307 
U   C6     C N N 308 
U   HOP3   H N N 309 
U   HOP2   H N N 310 
U   "H5'"  H N N 311 
U   "H5''" H N N 312 
U   "H4'"  H N N 313 
U   "H3'"  H N N 314 
U   "HO3'" H N N 315 
U   "H2'"  H N N 316 
U   "HO2'" H N N 317 
U   "H1'"  H N N 318 
U   H3     H N N 319 
U   H5     H N N 320 
U   H6     H N N 321 
VAL N      N N N 322 
VAL CA     C N S 323 
VAL C      C N N 324 
VAL O      O N N 325 
VAL CB     C N N 326 
VAL CG1    C N N 327 
VAL CG2    C N N 328 
VAL OXT    O N N 329 
VAL H      H N N 330 
VAL H2     H N N 331 
VAL HA     H N N 332 
VAL HB     H N N 333 
VAL HG11   H N N 334 
VAL HG12   H N N 335 
VAL HG13   H N N 336 
VAL HG21   H N N 337 
VAL HG22   H N N 338 
VAL HG23   H N N 339 
VAL HXT    H N N 340 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
4J5 O     C      doub N N 1   
4J5 CA    C      sing N N 2   
4J5 C     OXT    sing N N 3   
4J5 CA    N      sing N N 4   
4J5 N     H      sing N N 5   
4J5 N     H2     sing N N 6   
4J5 OXT   HXT    sing N N 7   
4J5 HA    CA     sing N N 8   
4J5 CA    CB     sing N N 9   
4J5 HB2   CB     sing N N 10  
4J5 CB    HB3    sing N N 11  
4J5 CB    CG     sing N N 12  
4J5 HD    ND     sing N N 13  
4J5 CE    ND     sing N N 14  
4J5 ND    CG     sing N N 15  
4J5 NH1   CE     sing N N 16  
4J5 CE    NH2    doub N N 17  
4J5 CG    HG3    sing N N 18  
4J5 CG    HG2    sing N N 19  
4J5 HH11  NH1    sing N N 20  
4J5 HH12  NH1    sing N N 21  
4J5 HH22  NH2    sing N N 22  
4J5 NH2   HH21   sing N N 23  
A   OP3   P      sing N N 24  
A   OP3   HOP3   sing N N 25  
A   P     OP1    doub N N 26  
A   P     OP2    sing N N 27  
A   P     "O5'"  sing N N 28  
A   OP2   HOP2   sing N N 29  
A   "O5'" "C5'"  sing N N 30  
A   "C5'" "C4'"  sing N N 31  
A   "C5'" "H5'"  sing N N 32  
A   "C5'" "H5''" sing N N 33  
A   "C4'" "O4'"  sing N N 34  
A   "C4'" "C3'"  sing N N 35  
A   "C4'" "H4'"  sing N N 36  
A   "O4'" "C1'"  sing N N 37  
A   "C3'" "O3'"  sing N N 38  
A   "C3'" "C2'"  sing N N 39  
A   "C3'" "H3'"  sing N N 40  
A   "O3'" "HO3'" sing N N 41  
A   "C2'" "O2'"  sing N N 42  
A   "C2'" "C1'"  sing N N 43  
A   "C2'" "H2'"  sing N N 44  
A   "O2'" "HO2'" sing N N 45  
A   "C1'" N9     sing N N 46  
A   "C1'" "H1'"  sing N N 47  
A   N9    C8     sing Y N 48  
A   N9    C4     sing Y N 49  
A   C8    N7     doub Y N 50  
A   C8    H8     sing N N 51  
A   N7    C5     sing Y N 52  
A   C5    C6     sing Y N 53  
A   C5    C4     doub Y N 54  
A   C6    N6     sing N N 55  
A   C6    N1     doub Y N 56  
A   N6    H61    sing N N 57  
A   N6    H62    sing N N 58  
A   N1    C2     sing Y N 59  
A   C2    N3     doub Y N 60  
A   C2    H2     sing N N 61  
A   N3    C4     sing Y N 62  
ARG N     CA     sing N N 63  
ARG N     H      sing N N 64  
ARG N     H2     sing N N 65  
ARG CA    C      sing N N 66  
ARG CA    CB     sing N N 67  
ARG CA    HA     sing N N 68  
ARG C     O      doub N N 69  
ARG C     OXT    sing N N 70  
ARG CB    CG     sing N N 71  
ARG CB    HB2    sing N N 72  
ARG CB    HB3    sing N N 73  
ARG CG    CD     sing N N 74  
ARG CG    HG2    sing N N 75  
ARG CG    HG3    sing N N 76  
ARG CD    NE     sing N N 77  
ARG CD    HD2    sing N N 78  
ARG CD    HD3    sing N N 79  
ARG NE    CZ     sing N N 80  
ARG NE    HE     sing N N 81  
ARG CZ    NH1    sing N N 82  
ARG CZ    NH2    doub N N 83  
ARG NH1   HH11   sing N N 84  
ARG NH1   HH12   sing N N 85  
ARG NH2   HH21   sing N N 86  
ARG NH2   HH22   sing N N 87  
ARG OXT   HXT    sing N N 88  
C   OP3   P      sing N N 89  
C   OP3   HOP3   sing N N 90  
C   P     OP1    doub N N 91  
C   P     OP2    sing N N 92  
C   P     "O5'"  sing N N 93  
C   OP2   HOP2   sing N N 94  
C   "O5'" "C5'"  sing N N 95  
C   "C5'" "C4'"  sing N N 96  
C   "C5'" "H5'"  sing N N 97  
C   "C5'" "H5''" sing N N 98  
C   "C4'" "O4'"  sing N N 99  
C   "C4'" "C3'"  sing N N 100 
C   "C4'" "H4'"  sing N N 101 
C   "O4'" "C1'"  sing N N 102 
C   "C3'" "O3'"  sing N N 103 
C   "C3'" "C2'"  sing N N 104 
C   "C3'" "H3'"  sing N N 105 
C   "O3'" "HO3'" sing N N 106 
C   "C2'" "O2'"  sing N N 107 
C   "C2'" "C1'"  sing N N 108 
C   "C2'" "H2'"  sing N N 109 
C   "O2'" "HO2'" sing N N 110 
C   "C1'" N1     sing N N 111 
C   "C1'" "H1'"  sing N N 112 
C   N1    C2     sing N N 113 
C   N1    C6     sing N N 114 
C   C2    O2     doub N N 115 
C   C2    N3     sing N N 116 
C   N3    C4     doub N N 117 
C   C4    N4     sing N N 118 
C   C4    C5     sing N N 119 
C   N4    H41    sing N N 120 
C   N4    H42    sing N N 121 
C   C5    C6     doub N N 122 
C   C5    H5     sing N N 123 
C   C6    H6     sing N N 124 
DAB N     CA     sing N N 125 
DAB N     H      sing N N 126 
DAB N     H2     sing N N 127 
DAB CA    C      sing N N 128 
DAB CA    CB     sing N N 129 
DAB CA    HA     sing N N 130 
DAB C     O      doub N N 131 
DAB C     OXT    sing N N 132 
DAB CB    CG     sing N N 133 
DAB CB    HB2    sing N N 134 
DAB CB    HB3    sing N N 135 
DAB CG    ND     sing N N 136 
DAB CG    HG2    sing N N 137 
DAB CG    HG3    sing N N 138 
DAB ND    HD1    sing N N 139 
DAB ND    HD2    sing N N 140 
DAB OXT   HXT    sing N N 141 
DPR N     CA     sing N N 142 
DPR N     CD     sing N N 143 
DPR N     H      sing N N 144 
DPR CA    CB     sing N N 145 
DPR CA    C      sing N N 146 
DPR CA    HA     sing N N 147 
DPR CB    CG     sing N N 148 
DPR CB    HB2    sing N N 149 
DPR CB    HB3    sing N N 150 
DPR CG    CD     sing N N 151 
DPR CG    HG2    sing N N 152 
DPR CG    HG3    sing N N 153 
DPR CD    HD2    sing N N 154 
DPR CD    HD3    sing N N 155 
DPR C     O      doub N N 156 
DPR C     OXT    sing N N 157 
DPR OXT   HXT    sing N N 158 
G   OP3   P      sing N N 159 
G   OP3   HOP3   sing N N 160 
G   P     OP1    doub N N 161 
G   P     OP2    sing N N 162 
G   P     "O5'"  sing N N 163 
G   OP2   HOP2   sing N N 164 
G   "O5'" "C5'"  sing N N 165 
G   "C5'" "C4'"  sing N N 166 
G   "C5'" "H5'"  sing N N 167 
G   "C5'" "H5''" sing N N 168 
G   "C4'" "O4'"  sing N N 169 
G   "C4'" "C3'"  sing N N 170 
G   "C4'" "H4'"  sing N N 171 
G   "O4'" "C1'"  sing N N 172 
G   "C3'" "O3'"  sing N N 173 
G   "C3'" "C2'"  sing N N 174 
G   "C3'" "H3'"  sing N N 175 
G   "O3'" "HO3'" sing N N 176 
G   "C2'" "O2'"  sing N N 177 
G   "C2'" "C1'"  sing N N 178 
G   "C2'" "H2'"  sing N N 179 
G   "O2'" "HO2'" sing N N 180 
G   "C1'" N9     sing N N 181 
G   "C1'" "H1'"  sing N N 182 
G   N9    C8     sing Y N 183 
G   N9    C4     sing Y N 184 
G   C8    N7     doub Y N 185 
G   C8    H8     sing N N 186 
G   N7    C5     sing Y N 187 
G   C5    C6     sing N N 188 
G   C5    C4     doub Y N 189 
G   C6    O6     doub N N 190 
G   C6    N1     sing N N 191 
G   N1    C2     sing N N 192 
G   N1    H1     sing N N 193 
G   C2    N2     sing N N 194 
G   C2    N3     doub N N 195 
G   N2    H21    sing N N 196 
G   N2    H22    sing N N 197 
G   N3    C4     sing N N 198 
GLY N     CA     sing N N 199 
GLY N     H      sing N N 200 
GLY N     H2     sing N N 201 
GLY CA    C      sing N N 202 
GLY CA    HA2    sing N N 203 
GLY CA    HA3    sing N N 204 
GLY C     O      doub N N 205 
GLY C     OXT    sing N N 206 
GLY OXT   HXT    sing N N 207 
ILE N     CA     sing N N 208 
ILE N     H      sing N N 209 
ILE N     H2     sing N N 210 
ILE CA    C      sing N N 211 
ILE CA    CB     sing N N 212 
ILE CA    HA     sing N N 213 
ILE C     O      doub N N 214 
ILE C     OXT    sing N N 215 
ILE CB    CG1    sing N N 216 
ILE CB    CG2    sing N N 217 
ILE CB    HB     sing N N 218 
ILE CG1   CD1    sing N N 219 
ILE CG1   HG12   sing N N 220 
ILE CG1   HG13   sing N N 221 
ILE CG2   HG21   sing N N 222 
ILE CG2   HG22   sing N N 223 
ILE CG2   HG23   sing N N 224 
ILE CD1   HD11   sing N N 225 
ILE CD1   HD12   sing N N 226 
ILE CD1   HD13   sing N N 227 
ILE OXT   HXT    sing N N 228 
LYS N     CA     sing N N 229 
LYS N     H      sing N N 230 
LYS N     H2     sing N N 231 
LYS CA    C      sing N N 232 
LYS CA    CB     sing N N 233 
LYS CA    HA     sing N N 234 
LYS C     O      doub N N 235 
LYS C     OXT    sing N N 236 
LYS CB    CG     sing N N 237 
LYS CB    HB2    sing N N 238 
LYS CB    HB3    sing N N 239 
LYS CG    CD     sing N N 240 
LYS CG    HG2    sing N N 241 
LYS CG    HG3    sing N N 242 
LYS CD    CE     sing N N 243 
LYS CD    HD2    sing N N 244 
LYS CD    HD3    sing N N 245 
LYS CE    NZ     sing N N 246 
LYS CE    HE2    sing N N 247 
LYS CE    HE3    sing N N 248 
LYS NZ    HZ1    sing N N 249 
LYS NZ    HZ2    sing N N 250 
LYS NZ    HZ3    sing N N 251 
LYS OXT   HXT    sing N N 252 
PRO N     CA     sing N N 253 
PRO N     CD     sing N N 254 
PRO N     H      sing N N 255 
PRO CA    C      sing N N 256 
PRO CA    CB     sing N N 257 
PRO CA    HA     sing N N 258 
PRO C     O      doub N N 259 
PRO C     OXT    sing N N 260 
PRO CB    CG     sing N N 261 
PRO CB    HB2    sing N N 262 
PRO CB    HB3    sing N N 263 
PRO CG    CD     sing N N 264 
PRO CG    HG2    sing N N 265 
PRO CG    HG3    sing N N 266 
PRO CD    HD2    sing N N 267 
PRO CD    HD3    sing N N 268 
PRO OXT   HXT    sing N N 269 
THR N     CA     sing N N 270 
THR N     H      sing N N 271 
THR N     H2     sing N N 272 
THR CA    C      sing N N 273 
THR CA    CB     sing N N 274 
THR CA    HA     sing N N 275 
THR C     O      doub N N 276 
THR C     OXT    sing N N 277 
THR CB    OG1    sing N N 278 
THR CB    CG2    sing N N 279 
THR CB    HB     sing N N 280 
THR OG1   HG1    sing N N 281 
THR CG2   HG21   sing N N 282 
THR CG2   HG22   sing N N 283 
THR CG2   HG23   sing N N 284 
THR OXT   HXT    sing N N 285 
U   OP3   P      sing N N 286 
U   OP3   HOP3   sing N N 287 
U   P     OP1    doub N N 288 
U   P     OP2    sing N N 289 
U   P     "O5'"  sing N N 290 
U   OP2   HOP2   sing N N 291 
U   "O5'" "C5'"  sing N N 292 
U   "C5'" "C4'"  sing N N 293 
U   "C5'" "H5'"  sing N N 294 
U   "C5'" "H5''" sing N N 295 
U   "C4'" "O4'"  sing N N 296 
U   "C4'" "C3'"  sing N N 297 
U   "C4'" "H4'"  sing N N 298 
U   "O4'" "C1'"  sing N N 299 
U   "C3'" "O3'"  sing N N 300 
U   "C3'" "C2'"  sing N N 301 
U   "C3'" "H3'"  sing N N 302 
U   "O3'" "HO3'" sing N N 303 
U   "C2'" "O2'"  sing N N 304 
U   "C2'" "C1'"  sing N N 305 
U   "C2'" "H2'"  sing N N 306 
U   "O2'" "HO2'" sing N N 307 
U   "C1'" N1     sing N N 308 
U   "C1'" "H1'"  sing N N 309 
U   N1    C2     sing N N 310 
U   N1    C6     sing N N 311 
U   C2    O2     doub N N 312 
U   C2    N3     sing N N 313 
U   N3    C4     sing N N 314 
U   N3    H3     sing N N 315 
U   C4    O4     doub N N 316 
U   C4    C5     sing N N 317 
U   C5    C6     doub N N 318 
U   C5    H5     sing N N 319 
U   C6    H6     sing N N 320 
VAL N     CA     sing N N 321 
VAL N     H      sing N N 322 
VAL N     H2     sing N N 323 
VAL CA    C      sing N N 324 
VAL CA    CB     sing N N 325 
VAL CA    HA     sing N N 326 
VAL C     O      doub N N 327 
VAL C     OXT    sing N N 328 
VAL CB    CG1    sing N N 329 
VAL CB    CG2    sing N N 330 
VAL CB    HB     sing N N 331 
VAL CG1   HG11   sing N N 332 
VAL CG1   HG12   sing N N 333 
VAL CG1   HG13   sing N N 334 
VAL CG2   HG21   sing N N 335 
VAL CG2   HG22   sing N N 336 
VAL CG2   HG23   sing N N 337 
VAL OXT   HXT    sing N N 338 
# 
_ndb_struct_conf_na.entry_id   6D2U 
_ndb_struct_conf_na.feature    'a-form double helix' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 B G 1  1_555 B C 29 1_555 -0.156 -0.178 -0.084 -1.995  -3.265  -1.693  1  B_G17:C45_B B 17 ? B 45 ? 19 1 
1 B G 2  1_555 B C 28 1_555 -0.121 -0.196 -0.239 -1.664  -11.585 -0.530  2  B_G18:C44_B B 18 ? B 44 ? 19 1 
1 B C 3  1_555 B G 27 1_555 0.129  -0.214 -0.294 -0.005  -11.225 -0.007  3  B_C19:G43_B B 19 ? B 43 ? 19 1 
1 B A 4  1_555 B U 26 1_555 0.213  -0.180 0.131  -4.751  -10.525 1.987   4  B_A20:U42_B B 20 ? B 42 ? 20 1 
1 B G 5  1_555 B C 25 1_555 -0.114 -0.203 -0.019 -5.592  -11.856 -2.284  5  B_G21:C41_B B 21 ? B 41 ? 19 1 
1 B A 6  1_555 B U 24 1_555 0.339  -0.154 0.227  -7.909  -1.004  -1.373  6  B_A22:U40_B B 22 ? B 40 ? 20 1 
1 B G 10 1_555 B C 23 1_555 -0.061 -0.159 -0.154 -27.790 14.177  2.616   7  B_G26:C39_B B 26 ? B 39 ? 19 1 
1 B A 11 1_555 B U 22 1_555 -0.221 -0.279 0.180  -8.544  -0.389  1.129   8  B_A27:U38_B B 27 ? B 38 ? 20 1 
1 B G 12 1_555 B C 21 1_555 -0.137 -0.218 -0.152 1.981   -8.235  -2.344  9  B_G28:C37_B B 28 ? B 37 ? 19 1 
1 B C 13 1_555 B G 20 1_555 0.127  -0.193 -0.105 -2.142  -8.439  -2.042  10 B_C29:G36_B B 29 ? B 36 ? 19 1 
1 B C 14 1_555 B G 18 1_555 -0.112 -0.766 1.625  -3.661  -14.677 -12.651 11 B_C30:G34_B B 30 ? B 34 ? 19 1 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 B G 1  1_555 B C 29 1_555 B G 2  1_555 B C 28 1_555 0.063  -1.722 3.366 0.997   8.131  30.003 -4.714 0.065  2.814 15.348  -1.882 
31.077 1  BB_G17G18:C44C45_BB B 17 ? B 45 ? B 18 ? B 44 ? 
1 B G 2  1_555 B C 28 1_555 B C 3  1_555 B G 27 1_555 0.068  -1.511 3.275 0.238   6.494  32.003 -3.767 -0.081 2.921 11.629  -0.427 
32.639 2  BB_G18C19:G43C44_BB B 18 ? B 44 ? B 19 ? B 43 ? 
1 B C 3  1_555 B G 27 1_555 B A 4  1_555 B U 26 1_555 0.141  -1.609 3.403 -1.330  10.537 30.849 -4.633 -0.474 2.713 19.111  2.412  
32.584 3  BB_C19A20:U42G43_BB B 19 ? B 43 ? B 20 ? B 42 ? 
1 B A 4  1_555 B U 26 1_555 B G 5  1_555 B C 25 1_555 -0.264 -1.628 3.231 0.697   10.765 29.203 -4.897 0.612  2.482 20.490  -1.326 
31.091 4  BB_A20G21:C41U42_BB B 20 ? B 42 ? B 21 ? B 41 ? 
1 B G 5  1_555 B C 25 1_555 B A 6  1_555 B U 24 1_555 0.270  -1.602 3.570 -1.913  9.734  31.716 -4.469 -0.800 2.943 17.290  3.398  
33.193 5  BB_G21A22:U40C41_BB B 21 ? B 41 ? B 22 ? B 40 ? 
1 B A 6  1_555 B U 24 1_555 B G 10 1_555 B C 23 1_555 -2.396 -1.803 3.809 -9.509  -0.444 45.744 -2.229 2.039  4.215 -0.564  12.078 
46.672 6  BB_A22G26:C39U40_BB B 22 ? B 40 ? B 26 ? B 39 ? 
1 B G 10 1_555 B C 23 1_555 B A 11 1_555 B U 22 1_555 -0.462 -2.241 3.171 4.134   -5.327 25.304 -3.462 2.174  3.445 -11.893 -9.229 
26.173 7  BB_G26A27:U38C39_BB B 26 ? B 39 ? B 27 ? B 38 ? 
1 B A 11 1_555 B U 22 1_555 B G 12 1_555 B C 21 1_555 -0.146 -1.756 2.738 2.044   13.815 27.847 -5.169 0.552  1.684 26.685  -3.948 
31.090 8  BB_A27G28:C37U38_BB B 27 ? B 38 ? B 28 ? B 37 ? 
1 B G 12 1_555 B C 21 1_555 B C 13 1_555 B G 20 1_555 0.312  -1.839 3.663 0.462   6.018  31.657 -4.462 -0.475 3.271 10.908  -0.837 
32.213 9  BB_G28C29:G36C37_BB B 28 ? B 37 ? B 29 ? B 36 ? 
1 B C 13 1_555 B G 20 1_555 B C 14 1_555 B G 18 1_555 0.350  -1.466 3.961 -10.944 5.216  38.471 -2.821 -1.959 3.517 7.686   16.127 
40.267 10 BB_C29C30:G34G36_BB B 29 ? B 36 ? B 30 ? B 34 ? 
# 
_pdbx_audit_support.funding_organization   
'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 
_pdbx_audit_support.country                'United States' 
_pdbx_audit_support.grant_number           5R01GM110569 
_pdbx_audit_support.ordinal                1 
# 
_pdbx_struct_assembly_auth_evidence.id                     1 
_pdbx_struct_assembly_auth_evidence.assembly_id            1 
_pdbx_struct_assembly_auth_evidence.experimental_support   none 
_pdbx_struct_assembly_auth_evidence.details                ? 
#