HEADER LYASE 16-APR-18 6D3U TITLE COMPLEX STRUCTURE OF ULVAN LYASE FROM NONLABEN ULVANIVORANS- NLR48 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ULVAN LYASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NONLABENS ULVANIVORANS; SOURCE 3 ORGANISM_TAXID: 906888; SOURCE 4 GENE: IL45_01530; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS COMPLEX STRUCTURE OF NLR48, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR T.ULAGANATHAN,M.CYGLER REVDAT 4 29-JUL-20 6D3U 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 17-APR-19 6D3U 1 REMARK REVDAT 2 19-DEC-18 6D3U 1 JRNL REVDAT 1 06-JUN-18 6D3U 0 JRNL AUTH T.ULAGANATHAN,E.BANIN,W.HELBERT,M.CYGLER JRNL TITL STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF PL28 FAMILY JRNL TITL 2 ULVAN LYASE NLR48 FROMNONLABENS ULVANIVORANS. JRNL REF J. BIOL. CHEM. V. 293 11564 2018 JRNL REFN ESSN 1083-351X JRNL PMID 29875159 JRNL DOI 10.1074/JBC.RA118.003659 REMARK 2 REMARK 2 RESOLUTION. 2.21 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.21 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.05 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 44393 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.500 REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.0549 - 5.3239 1.00 3236 157 0.1690 0.1677 REMARK 3 2 5.3239 - 4.2267 1.00 3092 144 0.1290 0.1647 REMARK 3 3 4.2267 - 3.6927 1.00 3069 146 0.1619 0.2245 REMARK 3 4 3.6927 - 3.3552 1.00 3033 144 0.1909 0.1759 REMARK 3 5 3.3552 - 3.1147 1.00 3022 146 0.2125 0.2393 REMARK 3 6 3.1147 - 2.9311 1.00 3018 139 0.2216 0.3085 REMARK 3 7 2.9311 - 2.7844 1.00 3018 140 0.2394 0.2683 REMARK 3 8 2.7844 - 2.6632 1.00 3022 140 0.2491 0.3203 REMARK 3 9 2.6632 - 2.5607 1.00 2998 145 0.2414 0.2660 REMARK 3 10 2.5607 - 2.4723 1.00 3018 144 0.2396 0.2885 REMARK 3 11 2.4723 - 2.3950 1.00 2960 137 0.2497 0.3294 REMARK 3 12 2.3950 - 2.3265 1.00 3016 143 0.2601 0.2691 REMARK 3 13 2.3265 - 2.2653 1.00 2984 138 0.2636 0.3274 REMARK 3 14 2.2653 - 2.2100 0.97 2908 136 0.2738 0.3181 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4285 REMARK 3 ANGLE : 1.091 5843 REMARK 3 CHIRALITY : 0.088 612 REMARK 3 PLANARITY : 0.006 788 REMARK 3 DIHEDRAL : 11.117 2522 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6D3U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-APR-18. REMARK 100 THE DEPOSITION ID IS D_1000233904. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44398 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.210 REMARK 200 RESOLUTION RANGE LOW (A) : 46.045 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 9.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09500 REMARK 200 FOR THE DATA SET : 14.8600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.21 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.27 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 1.09600 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.49 M SODIUM PHOSPHATE MONOBASIC REMARK 280 MONOHYDRATE, 0.91 M POTASSIUM PHOSPHATE DIBASIC, PH 6.9, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 282.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 41.23200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.51700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 51.33200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.51700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 41.23200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 51.33200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 LYS A 3 REMARK 465 LEU A 4 REMARK 465 LYS A 5 REMARK 465 TYR A 6 REMARK 465 ASN A 7 REMARK 465 THR A 8 REMARK 465 THR A 9 REMARK 465 ARG A 10 REMARK 465 VAL A 11 REMARK 465 ILE A 12 REMARK 465 LEU A 13 REMARK 465 MET A 14 REMARK 465 ILE A 15 REMARK 465 ALA A 16 REMARK 465 PHE A 17 REMARK 465 ILE A 18 REMARK 465 SER A 19 REMARK 465 LEU A 20 REMARK 465 SER A 21 REMARK 465 ALA A 22 REMARK 465 CYS A 23 REMARK 465 SER A 24 REMARK 465 SER A 25 REMARK 465 GLU A 26 REMARK 465 ASP A 27 REMARK 465 ALA A 28 REMARK 465 MET A 29 REMARK 465 ILE A 30 REMARK 465 GLU A 31 REMARK 465 GLU A 32 REMARK 465 GLU A 33 REMARK 465 GLN A 34 REMARK 465 VAL A 35 REMARK 465 ILE A 36 REMARK 465 PRO A 37 REMARK 465 ASP A 38 REMARK 465 PRO A 39 REMARK 465 ASP A 40 REMARK 465 PRO A 41 REMARK 465 VAL A 42 REMARK 465 ALA A 43 REMARK 465 MET B 1 REMARK 465 ARG B 2 REMARK 465 LYS B 3 REMARK 465 LEU B 4 REMARK 465 LYS B 5 REMARK 465 TYR B 6 REMARK 465 ASN B 7 REMARK 465 THR B 8 REMARK 465 THR B 9 REMARK 465 ARG B 10 REMARK 465 VAL B 11 REMARK 465 ILE B 12 REMARK 465 LEU B 13 REMARK 465 MET B 14 REMARK 465 ILE B 15 REMARK 465 ALA B 16 REMARK 465 PHE B 17 REMARK 465 ILE B 18 REMARK 465 SER B 19 REMARK 465 LEU B 20 REMARK 465 SER B 21 REMARK 465 ALA B 22 REMARK 465 CYS B 23 REMARK 465 SER B 24 REMARK 465 SER B 25 REMARK 465 GLU B 26 REMARK 465 ASP B 27 REMARK 465 ALA B 28 REMARK 465 MET B 29 REMARK 465 ILE B 30 REMARK 465 GLU B 31 REMARK 465 GLU B 32 REMARK 465 GLU B 33 REMARK 465 GLN B 34 REMARK 465 VAL B 35 REMARK 465 ILE B 36 REMARK 465 PRO B 37 REMARK 465 ASP B 38 REMARK 465 PRO B 39 REMARK 465 ASP B 40 REMARK 465 PRO B 41 REMARK 465 VAL B 42 REMARK 465 ALA B 43 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 44 CG CD OE1 NE2 REMARK 470 ASN A 190 CG OD1 ND2 REMARK 470 GLN A 247 CD OE1 NE2 REMARK 470 GLN B 44 CG CD OE1 NE2 REMARK 470 PRO B 245 CG CD REMARK 470 GLN B 247 OE1 NE2 REMARK 470 LYS B 255 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O4 83Y D 3 O3 GCD D 4 2.18 REMARK 500 O4 83Y C 3 O3 GCD C 4 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 80 56.46 -117.59 REMARK 500 THR A 113 -102.41 -122.81 REMARK 500 GLU A 144 147.51 -172.03 REMARK 500 ASN A 190 16.15 -142.56 REMARK 500 ASN A 227 -4.93 72.63 REMARK 500 ASN A 243 6.35 -64.03 REMARK 500 GLU A 267 60.74 70.27 REMARK 500 ARG A 282 116.68 81.91 REMARK 500 VAL A 283 89.19 -154.81 REMARK 500 ARG B 80 54.94 -118.99 REMARK 500 THR B 113 -102.20 -122.95 REMARK 500 GLU B 144 146.55 -170.96 REMARK 500 ASN B 190 16.11 -140.81 REMARK 500 ASN B 227 -4.07 72.66 REMARK 500 ASN B 243 7.88 -65.73 REMARK 500 GLU B 267 61.35 70.30 REMARK 500 ARG B 282 117.38 83.34 REMARK 500 VAL B 283 83.64 -153.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 59 O REMARK 620 2 ASN A 61 OD1 80.0 REMARK 620 3 ASP A 79 OD1 147.7 81.3 REMARK 620 4 ASP A 79 OD2 151.1 84.3 50.6 REMARK 620 5 SER A 81 O 75.3 95.1 80.5 130.6 REMARK 620 6 ALA A 84 O 91.9 170.6 108.1 101.0 87.3 REMARK 620 7 ASN A 85 OD1 78.4 92.4 128.6 78.1 150.8 81.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY B 59 O REMARK 620 2 ASN B 61 OD1 83.0 REMARK 620 3 ASP B 79 OD1 148.4 79.7 REMARK 620 4 ASP B 79 OD2 152.7 84.5 50.7 REMARK 620 5 SER B 81 O 79.0 96.7 76.9 126.6 REMARK 620 6 ALA B 84 O 90.6 173.6 106.3 100.9 82.8 REMARK 620 7 ASN B 85 OD1 76.9 95.0 130.6 80.1 151.7 82.8 REMARK 620 N 1 2 3 4 5 6 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6D2C RELATED DB: PDB DBREF1 6D3U A 1 303 UNP A0A084JZF2_9FLAO DBREF2 6D3U A A0A084JZF2 1 303 DBREF1 6D3U B 1 303 UNP A0A084JZF2_9FLAO DBREF2 6D3U B A0A084JZF2 1 303 SEQADV 6D3U MET A 162 UNP A0A084JZF LYS 162 ENGINEERED MUTATION SEQADV 6D3U MET B 162 UNP A0A084JZF LYS 162 ENGINEERED MUTATION SEQRES 1 A 303 MET ARG LYS LEU LYS TYR ASN THR THR ARG VAL ILE LEU SEQRES 2 A 303 MET ILE ALA PHE ILE SER LEU SER ALA CYS SER SER GLU SEQRES 3 A 303 ASP ALA MET ILE GLU GLU GLU GLN VAL ILE PRO ASP PRO SEQRES 4 A 303 ASP PRO VAL ALA GLN THR ASP GLU ASP THR GLY PRO VAL SEQRES 5 A 303 VAL ASP CYS THR ASN GLN GLY THR ASN PRO THR ARG ASP SEQRES 6 A 303 THR ASP ILE PRO ASN PRO ARG ASN ILE GLY ASP ILE ASP SEQRES 7 A 303 ASP ARG SER CYS TYR ALA ASN TYR SER GLU SER SER ILE SEQRES 8 A 303 LEU GLY LYS PHE TRP GLY ILE TYR ASN ILE THR ASP GLY SEQRES 9 A 303 SER ASN HIS MET ASP ALA PRO ASN THR LEU GLN PRO ARG SEQRES 10 A 303 ILE GLU ARG SER LEU SER ARG SER GLN ALA THR GLY ALA SEQRES 11 A 303 GLY SER TYR ALA ARG PHE ARG GLY VAL LEU ARG ILE LEU SEQRES 12 A 303 GLU VAL GLY ASP THR GLY THR PHE SER SER SER GLY SER SEQRES 13 A 303 TYR PHE MET GLN ALA MET GLY LYS HIS THR GLY GLY GLY SEQRES 14 A 303 GLY SER PRO ASP PRO ALA ILE CYS LEU TYR ARG ALA HIS SEQRES 15 A 303 PRO VAL TYR GLY ASP ASP GLY ASN GLY ASN GLN VAL GLN SEQRES 16 A 303 VAL SER PHE ASP ILE TRP ARG GLU GLN ILE ASN PHE ARG SEQRES 17 A 303 GLY GLY SER GLY SER ALA GLY ARG THR GLU VAL PHE LEU SEQRES 18 A 303 LYS ASN VAL LEU LYS ASN GLU GLN ILE ASP ILE GLU LEU SEQRES 19 A 303 GLU VAL GLY PHE ARG ASP ASP PRO ASN ASN PRO GLY GLN SEQRES 20 A 303 THR LEU HIS TYR ALA ASP ALA LYS ILE GLY GLY GLU GLU SEQRES 21 A 303 PHE ASN TRP ASN ILE PRO GLU PRO GLU ARG GLY ILE GLU SEQRES 22 A 303 SER GLY ILE ARG TYR GLY ALA TYR ARG VAL LYS GLY GLY SEQRES 23 A 303 ARG ALA GLN PHE ARG TRP ALA ASN THR SER TYR THR LYS SEQRES 24 A 303 ASP GLU VAL ASN SEQRES 1 B 303 MET ARG LYS LEU LYS TYR ASN THR THR ARG VAL ILE LEU SEQRES 2 B 303 MET ILE ALA PHE ILE SER LEU SER ALA CYS SER SER GLU SEQRES 3 B 303 ASP ALA MET ILE GLU GLU GLU GLN VAL ILE PRO ASP PRO SEQRES 4 B 303 ASP PRO VAL ALA GLN THR ASP GLU ASP THR GLY PRO VAL SEQRES 5 B 303 VAL ASP CYS THR ASN GLN GLY THR ASN PRO THR ARG ASP SEQRES 6 B 303 THR ASP ILE PRO ASN PRO ARG ASN ILE GLY ASP ILE ASP SEQRES 7 B 303 ASP ARG SER CYS TYR ALA ASN TYR SER GLU SER SER ILE SEQRES 8 B 303 LEU GLY LYS PHE TRP GLY ILE TYR ASN ILE THR ASP GLY SEQRES 9 B 303 SER ASN HIS MET ASP ALA PRO ASN THR LEU GLN PRO ARG SEQRES 10 B 303 ILE GLU ARG SER LEU SER ARG SER GLN ALA THR GLY ALA SEQRES 11 B 303 GLY SER TYR ALA ARG PHE ARG GLY VAL LEU ARG ILE LEU SEQRES 12 B 303 GLU VAL GLY ASP THR GLY THR PHE SER SER SER GLY SER SEQRES 13 B 303 TYR PHE MET GLN ALA MET GLY LYS HIS THR GLY GLY GLY SEQRES 14 B 303 GLY SER PRO ASP PRO ALA ILE CYS LEU TYR ARG ALA HIS SEQRES 15 B 303 PRO VAL TYR GLY ASP ASP GLY ASN GLY ASN GLN VAL GLN SEQRES 16 B 303 VAL SER PHE ASP ILE TRP ARG GLU GLN ILE ASN PHE ARG SEQRES 17 B 303 GLY GLY SER GLY SER ALA GLY ARG THR GLU VAL PHE LEU SEQRES 18 B 303 LYS ASN VAL LEU LYS ASN GLU GLN ILE ASP ILE GLU LEU SEQRES 19 B 303 GLU VAL GLY PHE ARG ASP ASP PRO ASN ASN PRO GLY GLN SEQRES 20 B 303 THR LEU HIS TYR ALA ASP ALA LYS ILE GLY GLY GLU GLU SEQRES 21 B 303 PHE ASN TRP ASN ILE PRO GLU PRO GLU ARG GLY ILE GLU SEQRES 22 B 303 SER GLY ILE ARG TYR GLY ALA TYR ARG VAL LYS GLY GLY SEQRES 23 B 303 ARG ALA GLN PHE ARG TRP ALA ASN THR SER TYR THR LYS SEQRES 24 B 303 ASP GLU VAL ASN HET 83Y C 1 24 HET BDP C 2 19 HET 83Y C 3 23 HET GCD C 4 17 HET 83Y D 1 24 HET BDP D 2 19 HET 83Y D 3 23 HET GCD D 4 17 HET CA A 401 1 HET PO4 A 402 5 HET PO4 A 403 5 HET CA B 401 1 HET PO4 B 402 5 HET PO4 B 403 5 HET EDO B 408 10 HETNAM 83Y 3-O-SULFO-ALPHA-L-RHAMNOPYRANOSE HETNAM BDP BETA-D-GLUCOPYRANURONIC ACID HETNAM GCD 4-DEOXY-ALPHA-L-THREO-HEX-4-ENOPYRANURONIC ACID HETNAM CA CALCIUM ION HETNAM PO4 PHOSPHATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN 83Y L-RHAMNOSE-3-SULPHATE HETSYN BDP D-GLUCURONIC ACID HETSYN EDO ETHYLENE GLYCOL FORMUL 3 83Y 4(C6 H12 O8 S) FORMUL 3 BDP 2(C6 H10 O7) FORMUL 3 GCD 2(C6 H8 O6) FORMUL 5 CA 2(CA 2+) FORMUL 6 PO4 4(O4 P 3-) FORMUL 11 EDO C2 H6 O2 FORMUL 12 HOH *212(H2 O) HELIX 1 AA1 THR A 56 THR A 60 5 5 HELIX 2 AA2 THR A 150 SER A 154 5 5 HELIX 3 AA3 SER A 211 GLY A 215 1 5 HELIX 4 AA4 GLU A 267 GLY A 271 5 5 HELIX 5 AA5 THR B 56 THR B 60 5 5 HELIX 6 AA6 THR B 150 SER B 154 5 5 HELIX 7 AA7 SER B 211 GLY B 215 1 5 HELIX 8 AA8 GLU B 267 GLY B 271 5 5 SHEET 1 AA1 7 ASP A 76 ARG A 80 0 SHEET 2 AA1 7 ARG A 117 SER A 121 -1 O ARG A 117 N ARG A 80 SHEET 3 AA1 7 GLY A 275 TYR A 281 -1 O TYR A 278 N ARG A 120 SHEET 4 AA1 7 SER A 156 MET A 162 -1 N TYR A 157 O TYR A 281 SHEET 5 AA1 7 ALA A 175 ASP A 187 -1 O CYS A 177 N ALA A 161 SHEET 6 AA1 7 GLN A 193 ILE A 205 -1 O VAL A 196 N VAL A 184 SHEET 7 AA1 7 ARG A 216 LEU A 225 -1 O LYS A 222 N ILE A 200 SHEET 1 AA2 7 SER A 87 ILE A 91 0 SHEET 2 AA2 7 LYS A 94 THR A 102 -1 O TRP A 96 N SER A 89 SHEET 3 AA2 7 ARG A 287 ASP A 300 -1 O TRP A 292 N GLY A 97 SHEET 4 AA2 7 SER A 132 GLU A 144 -1 N ARG A 135 O THR A 298 SHEET 5 AA2 7 ILE A 230 ASP A 240 -1 O LEU A 234 N PHE A 136 SHEET 6 AA2 7 THR A 248 ILE A 256 -1 O ASP A 253 N GLU A 235 SHEET 7 AA2 7 GLU A 259 PHE A 261 -1 O PHE A 261 N ALA A 254 SHEET 1 AA3 7 ASP B 76 ARG B 80 0 SHEET 2 AA3 7 ARG B 117 SER B 121 -1 O ARG B 117 N ARG B 80 SHEET 3 AA3 7 GLY B 275 TYR B 281 -1 O ALA B 280 N ILE B 118 SHEET 4 AA3 7 SER B 156 MET B 162 -1 N TYR B 157 O TYR B 281 SHEET 5 AA3 7 ALA B 175 ASP B 187 -1 O CYS B 177 N ALA B 161 SHEET 6 AA3 7 GLN B 193 ILE B 205 -1 O TRP B 201 N ARG B 180 SHEET 7 AA3 7 ARG B 216 LEU B 225 -1 O LYS B 222 N ILE B 200 SHEET 1 AA4 7 SER B 87 ILE B 91 0 SHEET 2 AA4 7 LYS B 94 THR B 102 -1 O ILE B 98 N SER B 87 SHEET 3 AA4 7 ARG B 287 ASP B 300 -1 O TRP B 292 N GLY B 97 SHEET 4 AA4 7 TYR B 133 GLU B 144 -1 N VAL B 139 O ALA B 293 SHEET 5 AA4 7 ILE B 230 ASP B 240 -1 O ILE B 232 N GLY B 138 SHEET 6 AA4 7 THR B 248 ILE B 256 -1 O ASP B 253 N GLU B 235 SHEET 7 AA4 7 GLU B 259 PHE B 261 -1 O PHE B 261 N ALA B 254 SSBOND 1 CYS A 55 CYS A 82 1555 1555 2.05 SSBOND 2 CYS B 55 CYS B 82 1555 1555 1.98 LINK O4 83Y C 1 C1 BDP C 2 1555 1555 1.39 LINK O4 BDP C 2 C1 83Y C 3 1555 1555 1.42 LINK O4 83Y C 3 C1 GCD C 4 1555 1555 1.41 LINK O4 83Y D 1 C1 BDP D 2 1555 1555 1.41 LINK O4 BDP D 2 C1 83Y D 3 1555 1555 1.43 LINK O4 83Y D 3 C1 GCD D 4 1555 1555 1.41 LINK O GLY A 59 CA CA A 401 1555 1555 2.68 LINK OD1 ASN A 61 CA CA A 401 1555 1555 2.22 LINK OD1 ASP A 79 CA CA A 401 1555 1555 2.64 LINK OD2 ASP A 79 CA CA A 401 1555 1555 2.45 LINK O SER A 81 CA CA A 401 1555 1555 2.27 LINK O ALA A 84 CA CA A 401 1555 1555 2.20 LINK OD1 ASN A 85 CA CA A 401 1555 1555 2.44 LINK O GLY B 59 CA CA B 401 1555 1555 2.68 LINK OD1 ASN B 61 CA CA B 401 1555 1555 2.20 LINK OD1 ASP B 79 CA CA B 401 1555 1555 2.57 LINK OD2 ASP B 79 CA CA B 401 1555 1555 2.47 LINK O SER B 81 CA CA B 401 1555 1555 2.31 LINK O ALA B 84 CA CA B 401 1555 1555 2.30 LINK OD1 ASN B 85 CA CA B 401 1555 1555 2.41 CRYST1 82.464 102.664 103.034 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012127 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009741 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009706 0.00000