HEADER TOXIN 25-APR-18 6D7Y TITLE 1.75 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF THE TOXIC C-TERMINAL TIP TITLE 2 OF CDIA FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH IMMUNE PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMAGGLUTININ; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: IMMUNE PROTEIN; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: BKN49_19035; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL-21(DE3) MAGIC; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG53; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: ENTEROBACTER CLOACAE; SOURCE 12 ORGANISM_TAXID: 550; SOURCE 13 GENE: SAMEA2273162_06031; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-MAGIC; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 2 DISEASES, CSGID, TOXIN EXPDTA X-RAY DIFFRACTION AUTHOR G.MINASOV,L.SHUVALOVA,Z.WAWRZAK,O.KIRYUKHINA,J.P.ALLEN,A.R.HAUSER, AUTHOR 2 W.F.ANDERSON,K.J.F.SATCHELL,A.JOACHIMIAK,CENTER FOR STRUCTURAL AUTHOR 3 GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 4 15-APR-20 6D7Y 1 JRNL REVDAT 3 25-MAR-20 6D7Y 1 JRNL REVDAT 2 11-MAR-20 6D7Y 1 JRNL REVDAT 1 01-MAY-19 6D7Y 0 JRNL AUTH J.P.ALLEN,E.A.OZER,G.MINASOV,L.SHUVALOVA,O.KIRYUKHINA, JRNL AUTH 2 K.J.F.SATCHELL,A.R.HAUSER JRNL TITL A COMPARATIVE GENOMICS APPROACH IDENTIFIES CONTACT-DEPENDENT JRNL TITL 2 GROWTH INHIBITION AS A VIRULENCE DETERMINANT. JRNL REF PROC.NATL.ACAD.SCI.USA V. 117 6811 2020 JRNL REFN ESSN 1091-6490 JRNL PMID 32156726 JRNL DOI 10.1073/PNAS.1919198117 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0189 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.18 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 19733 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1012 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.80 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1442 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2880 REMARK 3 BIN FREE R VALUE SET COUNT : 85 REMARK 3 BIN FREE R VALUE : 0.2800 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1974 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 98 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.84000 REMARK 3 B22 (A**2) : -0.84000 REMARK 3 B33 (A**2) : 2.73000 REMARK 3 B12 (A**2) : -0.42000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.141 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.130 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.109 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.205 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2065 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1903 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2776 ; 1.507 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4417 ; 0.880 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 255 ; 2.871 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 102 ;24.142 ;24.020 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 337 ; 9.372 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;13.449 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 286 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2336 ; 0.023 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 471 ; 0.019 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1011 ; 1.536 ; 1.826 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1010 ; 1.528 ; 1.824 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1269 ; 2.507 ; 2.727 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1270 ; 2.508 ; 2.729 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1054 ; 1.989 ; 2.058 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1054 ; 1.988 ; 2.058 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1507 ; 3.108 ; 3.012 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2284 ; 5.219 ;22.398 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2269 ; 5.183 ;22.213 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3352 A 3390 REMARK 3 ORIGIN FOR THE GROUP (A): 18.8100 50.0394 9.2394 REMARK 3 T TENSOR REMARK 3 T11: 0.0309 T22: 0.1242 REMARK 3 T33: 0.0901 T12: -0.0589 REMARK 3 T13: 0.0050 T23: -0.0162 REMARK 3 L TENSOR REMARK 3 L11: 2.9473 L22: 3.4615 REMARK 3 L33: 5.3315 L12: 0.7849 REMARK 3 L13: 0.6525 L23: 0.1372 REMARK 3 S TENSOR REMARK 3 S11: -0.0058 S12: -0.0274 S13: 0.1867 REMARK 3 S21: 0.0332 S22: -0.0349 S23: 0.5038 REMARK 3 S31: 0.2586 S32: -0.4456 S33: 0.0407 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3391 A 3406 REMARK 3 ORIGIN FOR THE GROUP (A): 18.9431 60.6565 15.1102 REMARK 3 T TENSOR REMARK 3 T11: 0.2459 T22: 0.2922 REMARK 3 T33: 0.4914 T12: 0.0622 REMARK 3 T13: 0.1296 T23: -0.0082 REMARK 3 L TENSOR REMARK 3 L11: 5.2368 L22: 4.2225 REMARK 3 L33: 9.9531 L12: 4.5873 REMARK 3 L13: 6.2621 L23: 6.0391 REMARK 3 S TENSOR REMARK 3 S11: -0.1603 S12: 0.0045 S13: 0.6170 REMARK 3 S21: -0.1141 S22: -0.0863 S23: 0.5678 REMARK 3 S31: -0.5121 S32: -0.3292 S33: 0.2466 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3407 A 3417 REMARK 3 ORIGIN FOR THE GROUP (A): 39.3531 56.8545 13.6825 REMARK 3 T TENSOR REMARK 3 T11: 0.0555 T22: 0.0960 REMARK 3 T33: 0.0640 T12: -0.0218 REMARK 3 T13: -0.0066 T23: 0.0056 REMARK 3 L TENSOR REMARK 3 L11: 7.5069 L22: 8.7542 REMARK 3 L33: 6.1155 L12: -4.9037 REMARK 3 L13: -2.8644 L23: 3.9889 REMARK 3 S TENSOR REMARK 3 S11: -0.1248 S12: -0.2051 S13: 0.0806 REMARK 3 S21: 0.4637 S22: 0.2264 S23: -0.4092 REMARK 3 S31: 0.2152 S32: 0.2644 S33: -0.1016 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3418 A 3443 REMARK 3 ORIGIN FOR THE GROUP (A): 30.1094 57.3193 13.7823 REMARK 3 T TENSOR REMARK 3 T11: 0.0327 T22: 0.0766 REMARK 3 T33: 0.0289 T12: -0.0052 REMARK 3 T13: 0.0059 T23: -0.0337 REMARK 3 L TENSOR REMARK 3 L11: 2.3218 L22: 3.9003 REMARK 3 L33: 3.5898 L12: 0.7916 REMARK 3 L13: -0.2742 L23: -0.0556 REMARK 3 S TENSOR REMARK 3 S11: -0.0624 S12: -0.1163 S13: 0.1737 REMARK 3 S21: 0.1442 S22: -0.0890 S23: 0.1811 REMARK 3 S31: 0.0192 S32: -0.1918 S33: 0.1514 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 35 REMARK 3 ORIGIN FOR THE GROUP (A): 23.4127 33.0467 5.7599 REMARK 3 T TENSOR REMARK 3 T11: 0.4324 T22: 0.2157 REMARK 3 T33: 0.1203 T12: -0.1263 REMARK 3 T13: 0.1488 T23: -0.0652 REMARK 3 L TENSOR REMARK 3 L11: 3.0012 L22: 2.7939 REMARK 3 L33: 1.1485 L12: 0.2644 REMARK 3 L13: 0.1563 L23: -0.4438 REMARK 3 S TENSOR REMARK 3 S11: -0.1561 S12: 0.1493 S13: -0.2333 REMARK 3 S21: 0.0319 S22: -0.0241 S23: 0.3244 REMARK 3 S31: 0.5834 S32: -0.2115 S33: 0.1802 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 36 B 48 REMARK 3 ORIGIN FOR THE GROUP (A): 9.0639 33.4167 9.1809 REMARK 3 T TENSOR REMARK 3 T11: 0.1809 T22: 0.2296 REMARK 3 T33: 0.1363 T12: -0.0998 REMARK 3 T13: 0.0605 T23: -0.0418 REMARK 3 L TENSOR REMARK 3 L11: 1.4895 L22: 8.7836 REMARK 3 L33: 1.4015 L12: 0.6188 REMARK 3 L13: 0.4337 L23: -3.1109 REMARK 3 S TENSOR REMARK 3 S11: 0.0807 S12: -0.2038 S13: 0.1132 REMARK 3 S21: 0.0748 S22: 0.0067 S23: 0.3754 REMARK 3 S31: 0.0290 S32: -0.1247 S33: -0.0874 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 49 B 96 REMARK 3 ORIGIN FOR THE GROUP (A): 19.5472 34.6659 4.8941 REMARK 3 T TENSOR REMARK 3 T11: 0.2852 T22: 0.1973 REMARK 3 T33: 0.0825 T12: -0.1407 REMARK 3 T13: 0.0638 T23: -0.0349 REMARK 3 L TENSOR REMARK 3 L11: 3.4586 L22: 2.9079 REMARK 3 L33: 3.2172 L12: 0.4078 REMARK 3 L13: 0.8407 L23: 0.0001 REMARK 3 S TENSOR REMARK 3 S11: -0.1967 S12: 0.1936 S13: -0.2972 REMARK 3 S21: -0.0781 S22: -0.0296 S23: 0.2225 REMARK 3 S31: 0.4878 S32: -0.2607 S33: 0.2263 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 97 B 155 REMARK 3 ORIGIN FOR THE GROUP (A): 34.9448 38.9295 2.4586 REMARK 3 T TENSOR REMARK 3 T11: 0.2536 T22: 0.1298 REMARK 3 T33: 0.0301 T12: -0.0005 REMARK 3 T13: 0.0479 T23: -0.0139 REMARK 3 L TENSOR REMARK 3 L11: 2.5464 L22: 3.0191 REMARK 3 L33: 3.3239 L12: 0.3370 REMARK 3 L13: 0.0067 L23: 1.3147 REMARK 3 S TENSOR REMARK 3 S11: -0.0707 S12: 0.2823 S13: -0.1418 REMARK 3 S21: -0.0583 S22: 0.0879 S23: -0.2335 REMARK 3 S31: 0.4631 S32: -0.0342 S33: -0.0172 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6D7Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-APR-18. REMARK 100 THE DEPOSITION ID IS D_1000234144. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-APR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : BE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20855 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : 0.07500 REMARK 200 FOR THE DATA SET : 30.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.79900 REMARK 200 R SYM FOR SHELL (I) : 0.79900 REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN: 6.4MG/ML, 0.5 SODIUM REMARK 280 CHLORIDE, 0.01M TRIS PH 8.3; SCREEN: CLASICS II (D6), 0.1M BIS- REMARK 280 TRIS PH 5.5, 25% (W/V) PEG 3350;, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 30.72050 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 30.72050 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 30.72050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 3348 REMARK 465 LYS A 3349 REMARK 465 THR A 3350 REMARK 465 VAL A 3351 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A3360 58.83 39.56 REMARK 500 SER A3362 -137.76 -146.42 REMARK 500 PHE B 41 51.97 -150.22 REMARK 500 SER B 42 -171.10 57.90 REMARK 500 ASN B 148 -124.73 50.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP95525 RELATED DB: TARGETTRACK DBREF1 6D7Y A 3348 3443 UNP A0A1X0SIL3_PSEAI DBREF2 6D7Y A A0A1X0SIL3 1406 1501 DBREF1 6D7Y B 2 155 UNP A0A157WHH8_ENTCL DBREF2 6D7Y B A0A157WHH8 2 155 SEQADV 6D7Y MSE B 1 UNP A0A157WHH INITIATING METHIONINE SEQRES 1 A 96 ILE LYS THR VAL LEU ASP THR ALA GLN ALA PRO TYR LYS SEQRES 2 A 96 GLY SER THR VAL ILE GLY HIS ALA LEU SER LYS HIS ALA SEQRES 3 A 96 GLY ARG HIS PRO GLU ILE TRP GLY LYS VAL LYS GLY SER SEQRES 4 A 96 MSE SER GLY TRP ASN GLU GLN ALA MSE LYS HIS PHE LYS SEQRES 5 A 96 GLU ILE VAL ARG ALA PRO GLY GLU PHE ARG PRO THR MSE SEQRES 6 A 96 ASN GLU LYS GLY ILE THR PHE LEU GLU LYS ARG LEU ILE SEQRES 7 A 96 ASP GLY ARG GLY VAL ARG LEU ASN LEU ASP GLY THR PHE SEQRES 8 A 96 LYS GLY PHE ILE ASP SEQRES 1 B 155 MSE LYS GLU LEU PHE GLU VAL ILE PHE GLU GLY VAL ASN SEQRES 2 B 155 THR SER ARG LEU PHE PHE LEU LEU LYS GLU ILE GLU SER SEQRES 3 B 155 LYS SER ASP ARG ILE PHE ASP PHE ASN PHE SER GLU ASP SEQRES 4 B 155 PHE PHE SER SER ASN VAL ASN VAL PHE SER GLU LEU LEU SEQRES 5 B 155 ILE ASP SER PHE LEU GLY PHE ASN GLY ASP LEU TYR PHE SEQRES 6 B 155 GLY VAL SER MSE GLU GLY PHE SER VAL LYS ASP GLY LEU SEQRES 7 B 155 LYS LEU PRO VAL VAL LEU LEU ARG VAL LEU LYS TYR GLU SEQRES 8 B 155 GLY GLY VAL ASP VAL GLY LEU CYS PHE TYR MSE ASN ASP SEQRES 9 B 155 PHE ASN SER ALA GLY LYS VAL MSE LEU GLU PHE GLN LYS SEQRES 10 B 155 TYR MSE ASN GLY ILE SER ALA ASP PHE GLY PHE GLU ASN SEQRES 11 B 155 PHE TYR GLY GLY LEU GLU PRO ALA SER ASP GLN GLU THR SEQRES 12 B 155 ARG PHE PHE THR ASN ASN ARG LEU GLY PRO LEU LEU MODRES 6D7Y MSE A 3387 MET MODIFIED RESIDUE MODRES 6D7Y MSE A 3395 MET MODIFIED RESIDUE MODRES 6D7Y MSE A 3412 MET MODIFIED RESIDUE MODRES 6D7Y MSE B 69 MET MODIFIED RESIDUE MODRES 6D7Y MSE B 102 MET MODIFIED RESIDUE MODRES 6D7Y MSE B 112 MET MODIFIED RESIDUE MODRES 6D7Y MSE B 119 MET MODIFIED RESIDUE HET MSE A3387 8 HET MSE A3395 8 HET MSE A3412 8 HET MSE B 1 8 HET MSE B 69 16 HET MSE B 102 8 HET MSE B 112 8 HET MSE B 119 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 HOH *98(H2 O) HELIX 1 AA1 VAL A 3364 HIS A 3376 1 13 HELIX 2 AA2 HIS A 3376 GLY A 3381 1 6 HELIX 3 AA3 SER A 3386 ALA A 3404 1 19 HELIX 4 AA4 ARG B 16 SER B 26 1 11 HELIX 5 AA5 SER B 49 PHE B 59 1 11 HELIX 6 AA6 ASP B 104 GLY B 127 1 24 HELIX 7 AA7 ASP B 140 GLU B 142 5 3 SHEET 1 AA1 2 PRO A3358 TYR A3359 0 SHEET 2 AA1 2 SER A3362 THR A3363 -1 O SER A3362 N TYR A3359 SHEET 1 AA2 4 ARG A3409 MSE A3412 0 SHEET 2 AA2 4 THR A3418 ARG A3423 -1 O PHE A3419 N THR A3411 SHEET 3 AA2 4 GLY A3429 ASN A3433 -1 O LEU A3432 N LEU A3420 SHEET 4 AA2 4 PHE A3438 ILE A3442 -1 O GLY A3440 N ARG A3431 SHEET 1 AA3 8 ARG B 30 PHE B 36 0 SHEET 2 AA3 8 LEU B 63 LYS B 75 -1 O GLY B 66 N ASN B 35 SHEET 3 AA3 8 LEU B 78 TYR B 90 -1 O VAL B 83 N MSE B 69 SHEET 4 AA3 8 GLY B 93 MSE B 102 -1 O GLY B 97 N ARG B 86 SHEET 5 AA3 8 GLU B 3 GLU B 10 -1 N PHE B 9 O VAL B 96 SHEET 6 AA3 8 ASN B 130 LEU B 135 -1 O ASN B 130 N GLU B 10 SHEET 7 AA3 8 ARG B 144 THR B 147 -1 O PHE B 145 N GLY B 133 SHEET 8 AA3 8 ARG B 150 LEU B 151 -1 O ARG B 150 N THR B 147 LINK C SER A3386 N MSE A3387 1555 1555 1.33 LINK C MSE A3387 N SER A3388 1555 1555 1.34 LINK C ALA A3394 N MSE A3395 1555 1555 1.33 LINK C MSE A3395 N LYS A3396 1555 1555 1.34 LINK C THR A3411 N MSE A3412 1555 1555 1.34 LINK C MSE A3412 N ASN A3413 1555 1555 1.33 LINK C MSE B 1 N LYS B 2 1555 1555 1.34 LINK C SER B 68 N AMSE B 69 1555 1555 1.32 LINK C SER B 68 N BMSE B 69 1555 1555 1.33 LINK C AMSE B 69 N GLU B 70 1555 1555 1.33 LINK C BMSE B 69 N GLU B 70 1555 1555 1.32 LINK C TYR B 101 N MSE B 102 1555 1555 1.34 LINK C MSE B 102 N ASN B 103 1555 1555 1.33 LINK C VAL B 111 N MSE B 112 1555 1555 1.33 LINK C MSE B 112 N LEU B 113 1555 1555 1.33 LINK C TYR B 118 N MSE B 119 1555 1555 1.33 LINK C MSE B 119 N ASN B 120 1555 1555 1.33 CISPEP 1 GLU B 136 PRO B 137 0 -1.46 CISPEP 2 GLY B 152 PRO B 153 0 1.71 CRYST1 76.579 76.579 61.441 90.00 90.00 120.00 P 63 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013058 0.007539 0.000000 0.00000 SCALE2 0.000000 0.015079 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016276 0.00000