HEADER RNA BINDING PROTEIN 26-APR-18 6D8A TITLE RSAGO TERNARY COMPLEX WITH GUIDE RNA AND TARGET DNA CONTAINING A-A TITLE 2 BULGE WITHIN THE SEED SEGMENT OF THE TARGET STRAND COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, F; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: RNA (5'- COMPND 7 R(P*UP*UP*AP*CP*UP*GP*CP*AP*CP*AP*GP*GP*UP*GP*AP*CP*GP*A)-3'); COMPND 8 CHAIN: C, H; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: DNA (5'- COMPND 12 D(P*TP*CP*GP*TP*CP*AP*CP*CP*TP*GP*TP*GP*CP*AP*GP*AP*AP*TP*AP*AP*C)- COMPND 13 3'); COMPND 14 CHAIN: G, J; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOBACTER SPHAEROIDES (STRAIN ATCC 17025 / SOURCE 3 ATH 2.4.3); SOURCE 4 ORGANISM_TAXID: 349102; SOURCE 5 STRAIN: ATCC 17025 / ATH 2.4.3; SOURCE 6 GENE: RSPH17025_3694; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: RHODOBACTER SPHAEROIDES ATCC 17025; SOURCE 12 ORGANISM_TAXID: 349102; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: RHODOBACTER SPHAEROIDES ATCC 17025; SOURCE 16 ORGANISM_TAXID: 349102 KEYWDS RHODOBACTER SPHAERODES ARGOUNAUTE (RSAGO); GUIDE RNA; TARGET DNA; KEYWDS 2 RNA-DNA HETERODUPLEX; NON-CANONICAL BASE PAIRS AND BULGES, RNA KEYWDS 3 BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.LIU,D.ESYUNINA,I.OLOVNIKOV,M.TEPLOVA,D.J.PATEL REVDAT 2 13-MAR-24 6D8A 1 LINK REVDAT 1 25-JUL-18 6D8A 0 JRNL AUTH Y.LIU,D.ESYUNINA,I.OLOVNIKOV,M.TEPLOVA,A.KULBACHINSKIY, JRNL AUTH 2 A.A.ARAVIN,D.J.PATEL JRNL TITL ACCOMMODATION OF HELICAL IMPERFECTIONS IN RHODOBACTER JRNL TITL 2 SPHAEROIDES ARGONAUTE TERNARY COMPLEXES WITH GUIDE RNA AND JRNL TITL 3 TARGET DNA. JRNL REF CELL REP V. 24 453 2018 JRNL REFN ESSN 2211-1247 JRNL PMID 29996105 JRNL DOI 10.1016/J.CELREP.2018.06.021 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.67 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 88571 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6D8A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-APR-18. REMARK 100 THE DEPOSITION ID IS D_1000234127. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 88612 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.65000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40% MPD, 30 MM MAGNESIUM ACETATE, 50 REMARK 280 MM SODIUM CACODYLATE PH 5.7, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 59.49250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -90.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -90.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, H, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 ASP A -6 REMARK 465 TYR A -5 REMARK 465 LYS A -4 REMARK 465 ASP A -3 REMARK 465 ASP A -2 REMARK 465 ASP A -1 REMARK 465 ASP A 0 REMARK 465 LYS A 1 REMARK 465 ALA A 2 REMARK 465 PRO A 3 REMARK 465 VAL A 4 REMARK 465 GLN A 5 REMARK 465 ALA A 6 REMARK 465 ALA A 7 REMARK 465 ASP A 8 REMARK 465 GLU A 9 REMARK 465 MET A 10 REMARK 465 TYR A 11 REMARK 465 ASP A 12 REMARK 465 SER A 13 REMARK 465 ASN A 14 REMARK 465 PRO A 15 REMARK 465 HIS A 16 REMARK 465 PRO A 17 REMARK 465 ASP A 18 REMARK 465 ARG A 19 REMARK 465 DC G -16 REMARK 465 DT G -15 REMARK 465 DG G -14 REMARK 465 DT G 8 REMARK 465 DG G 9 REMARK 465 MET F -13 REMARK 465 HIS F -12 REMARK 465 HIS F -11 REMARK 465 HIS F -10 REMARK 465 HIS F -9 REMARK 465 HIS F -8 REMARK 465 HIS F -7 REMARK 465 ASP F -6 REMARK 465 TYR F -5 REMARK 465 LYS F -4 REMARK 465 ASP F -3 REMARK 465 ASP F -2 REMARK 465 ASP F -1 REMARK 465 ASP F 0 REMARK 465 LYS F 1 REMARK 465 ALA F 2 REMARK 465 PRO F 3 REMARK 465 VAL F 4 REMARK 465 GLN F 5 REMARK 465 ALA F 6 REMARK 465 ALA F 7 REMARK 465 ASP F 8 REMARK 465 GLU F 9 REMARK 465 MET F 10 REMARK 465 TYR F 11 REMARK 465 ASP F 12 REMARK 465 SER F 13 REMARK 465 ASN F 14 REMARK 465 PRO F 15 REMARK 465 HIS F 16 REMARK 465 PRO F 17 REMARK 465 ASP F 18 REMARK 465 ARG F 19 REMARK 465 DC J -16 REMARK 465 DT J -15 REMARK 465 DT J 8 REMARK 465 DG J 9 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 36 CG CD OE1 OE2 REMARK 470 SER A 46 OG REMARK 470 LYS A 47 CG CD CE NZ REMARK 470 LYS A 49 CD CE NZ REMARK 470 GLU A 50 CG CD OE1 OE2 REMARK 470 LYS A 74 CD CE NZ REMARK 470 GLU A 83 CG CD OE1 OE2 REMARK 470 ARG A 85 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 115 CG CD CE NZ REMARK 470 LYS A 125 CG CD CE NZ REMARK 470 SER A 139 OG REMARK 470 ARG A 185 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 195 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 203 CG CD CE NZ REMARK 470 GLU A 208 CG CD OE1 OE2 REMARK 470 SER A 219 OG REMARK 470 ASP A 221 CG OD1 OD2 REMARK 470 GLN A 224 CG CD OE1 NE2 REMARK 470 HIS A 258 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 261 CG CD CE NZ REMARK 470 LYS A 262 CG CD CE NZ REMARK 470 LYS A 293 CD CE NZ REMARK 470 ARG A 297 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 315 CG CD OE1 OE2 REMARK 470 GLN A 317 CG CD OE1 NE2 REMARK 470 THR A 334 OG1 CG2 REMARK 470 LYS A 337 CD CE NZ REMARK 470 ARG A 344 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 375 CE NZ REMARK 470 LYS A 490 CG CD CE NZ REMARK 470 LYS A 518 CG CD CE NZ REMARK 470 ASP A 554 CG OD1 OD2 REMARK 470 GLU A 565 CG CD OE1 OE2 REMARK 470 GLU A 569 CG CD OE1 OE2 REMARK 470 GLU A 585 CG CD OE1 OE2 REMARK 470 LYS A 588 CG CD CE NZ REMARK 470 ARG A 651 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 654 CG CD OE1 OE2 REMARK 470 LYS A 657 CG CD CE NZ REMARK 470 SER A 659 OG REMARK 470 DA G 3 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA G 3 C2 N3 C4 REMARK 470 DC G 7 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC G 7 C6 REMARK 470 SER F 46 OG REMARK 470 LYS F 47 CG CD CE NZ REMARK 470 LYS F 49 CD CE NZ REMARK 470 GLU F 50 CG CD OE1 OE2 REMARK 470 LYS F 74 CD CE NZ REMARK 470 LYS F 110 CG CD CE NZ REMARK 470 LYS F 125 CG CD CE NZ REMARK 470 LYS F 147 CD CE NZ REMARK 470 LEU F 184 CG CD1 CD2 REMARK 470 ARG F 185 CG CD NE CZ NH1 NH2 REMARK 470 ILE F 192 CG1 CG2 CD1 REMARK 470 ARG F 195 CG CD NE CZ NH1 NH2 REMARK 470 LYS F 203 CG CD CE NZ REMARK 470 ARG F 204 CG CD NE CZ NH1 NH2 REMARK 470 GLN F 205 CG CD OE1 NE2 REMARK 470 GLU F 208 CG CD OE1 OE2 REMARK 470 ARG F 209 CG CD NE CZ NH1 NH2 REMARK 470 ARG F 216 CG CD NE CZ NH1 NH2 REMARK 470 SER F 219 OG REMARK 470 ASP F 221 CG OD1 OD2 REMARK 470 GLN F 224 CG CD OE1 NE2 REMARK 470 VAL F 236 CG1 CG2 REMARK 470 HIS F 258 CG ND1 CD2 CE1 NE2 REMARK 470 LYS F 261 CG CD CE NZ REMARK 470 LYS F 262 CG CD CE NZ REMARK 470 ARG F 279 CG CD NE CZ NH1 NH2 REMARK 470 LYS F 293 CD CE NZ REMARK 470 LYS F 294 CG CD CE NZ REMARK 470 ARG F 297 CG CD NE CZ NH1 NH2 REMARK 470 GLN F 317 CG CD OE1 NE2 REMARK 470 LYS F 326 CD CE NZ REMARK 470 ARG F 333 CD NE CZ NH1 NH2 REMARK 470 THR F 334 OG1 CG2 REMARK 470 LYS F 337 CD CE NZ REMARK 470 GLU F 340 CG CD OE1 OE2 REMARK 470 ARG F 344 CG CD NE CZ NH1 NH2 REMARK 470 GLN F 348 CG CD OE1 NE2 REMARK 470 LYS F 375 CE NZ REMARK 470 GLU F 441 CG CD OE1 OE2 REMARK 470 GLU F 488 CG CD OE1 OE2 REMARK 470 LYS F 490 CG CD CE NZ REMARK 470 ASN F 521 CG OD1 ND2 REMARK 470 LYS F 540 CG CD CE NZ REMARK 470 GLN F 542 CG CD OE1 NE2 REMARK 470 ASP F 554 CG OD1 OD2 REMARK 470 GLU F 565 CG CD OE1 OE2 REMARK 470 GLU F 569 CG CD OE1 OE2 REMARK 470 GLU F 577 CG CD OE1 OE2 REMARK 470 GLU F 585 CG CD OE1 OE2 REMARK 470 LYS F 587 CG CD CE NZ REMARK 470 LYS F 588 CG CD CE NZ REMARK 470 ARG F 589 CG CD NE CZ NH1 NH2 REMARK 470 ASN F 591 CG OD1 ND2 REMARK 470 ARG F 593 CG CD NE CZ NH1 NH2 REMARK 470 ARG F 651 CG CD NE CZ NH1 NH2 REMARK 470 GLU F 654 CG CD OE1 OE2 REMARK 470 TYR F 656 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS F 657 CG CD CE NZ REMARK 470 LYS F 756 CD CE NZ REMARK 470 DA J 3 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA J 3 C2 N3 C4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH21 ARG F 214 OE2 GLU F 227 1.48 REMARK 500 H GLY A 553 O SER A 556 1.58 REMARK 500 HH12 ARG F 363 O ALA F 439 1.58 REMARK 500 OD1 ASP F 353 HH TYR F 504 1.59 REMARK 500 O LEU F 496 HG SER F 500 1.60 REMARK 500 O HOH A 1042 O HOH A 1052 1.98 REMARK 500 O HOH F 1015 O HOH F 1053 2.03 REMARK 500 OP1 DC J -6 O HOH J 201 2.09 REMARK 500 OE1 GLU F 242 O HOH F 901 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 U C 1 P U C 1 OP3 -0.118 REMARK 500 U H 1 P U H 1 OP3 -0.133 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT G -13 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES REMARK 500 DA G 5 O4' - C4' - C3' ANGL. DEV. = -3.1 DEGREES REMARK 500 DA G 6 O4' - C1' - N9 ANGL. DEV. = 2.9 DEGREES REMARK 500 ARG F 599 CG - CD - NE ANGL. DEV. = -15.8 DEGREES REMARK 500 ARG F 599 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 DT J -5 O4' - C1' - N1 ANGL. DEV. = 4.0 DEGREES REMARK 500 DA J 2 O4' - C1' - N9 ANGL. DEV. = 2.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 64 111.91 -170.86 REMARK 500 ARG A 117 74.66 42.70 REMARK 500 PRO A 206 109.52 -36.66 REMARK 500 ASP A 230 -153.18 -114.73 REMARK 500 LEU A 231 152.47 -39.57 REMARK 500 LEU A 255 -20.77 -140.86 REMARK 500 ASN A 301 51.01 -147.65 REMARK 500 ALA A 439 171.21 -42.94 REMARK 500 ASN A 508 5.48 88.18 REMARK 500 ILE A 768 -89.86 -116.42 REMARK 500 LEU F 108 64.44 -117.93 REMARK 500 ARG F 117 60.40 37.71 REMARK 500 GLU F 127 107.98 -168.13 REMARK 500 GLN F 205 175.08 84.69 REMARK 500 ASP F 221 49.31 37.66 REMARK 500 MET F 222 -177.79 -171.37 REMARK 500 ASP F 230 -75.90 -119.00 REMARK 500 PHE F 394 80.52 -154.05 REMARK 500 ASN F 508 11.12 80.39 REMARK 500 LYS F 518 80.10 -66.13 REMARK 500 ASP F 522 138.81 -179.95 REMARK 500 ASP F 554 100.05 -58.38 REMARK 500 ASN F 591 77.88 44.70 REMARK 500 ILE F 768 -89.58 -118.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG F 599 0.13 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 101 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 777 O REMARK 620 2 LEU A 777 OXT 54.2 REMARK 620 3 HOH A 915 O 97.3 90.4 REMARK 620 4 U C 1 OP3 140.8 89.4 97.0 REMARK 620 5 A C 3 OP1 97.2 150.3 102.3 115.0 REMARK 620 6 HOH C 206 O 79.9 83.6 173.9 82.1 83.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG H 101 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU F 777 O REMARK 620 2 LEU F 777 OXT 53.0 REMARK 620 3 HOH F 950 O 93.2 90.3 REMARK 620 4 U H 1 OP3 137.9 85.3 92.4 REMARK 620 5 A H 3 OP1 105.2 155.0 104.2 113.7 REMARK 620 6 HOH H 207 O 84.7 78.9 167.8 81.4 87.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD G 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD F 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD F 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT F 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG H 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD J 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6D8P RELATED DB: PDB REMARK 900 RELATED ID: 6D8F RELATED DB: PDB REMARK 900 RELATED ID: 6D95 RELATED DB: PDB REMARK 900 RELATED ID: 6D92 RELATED DB: PDB DBREF 6D8A A 2 777 UNP A4WYU7 A4WYU7_RHOS5 2 777 DBREF 6D8A C 1 18 PDB 6D8A 6D8A 1 18 DBREF 6D8A G -16 9 PDB 6D8A 6D8A -16 9 DBREF 6D8A F 2 777 UNP A4WYU7 A4WYU7_RHOS5 2 777 DBREF 6D8A H 1 18 PDB 6D8A 6D8A 1 18 DBREF 6D8A J -16 9 PDB 6D8A 6D8A -16 9 SEQADV 6D8A MET A -13 UNP A4WYU7 INITIATING METHIONINE SEQADV 6D8A HIS A -12 UNP A4WYU7 EXPRESSION TAG SEQADV 6D8A HIS A -11 UNP A4WYU7 EXPRESSION TAG SEQADV 6D8A HIS A -10 UNP A4WYU7 EXPRESSION TAG SEQADV 6D8A HIS A -9 UNP A4WYU7 EXPRESSION TAG SEQADV 6D8A HIS A -8 UNP A4WYU7 EXPRESSION TAG SEQADV 6D8A HIS A -7 UNP A4WYU7 EXPRESSION TAG SEQADV 6D8A ASP A -6 UNP A4WYU7 EXPRESSION TAG SEQADV 6D8A TYR A -5 UNP A4WYU7 EXPRESSION TAG SEQADV 6D8A LYS A -4 UNP A4WYU7 EXPRESSION TAG SEQADV 6D8A ASP A -3 UNP A4WYU7 EXPRESSION TAG SEQADV 6D8A ASP A -2 UNP A4WYU7 EXPRESSION TAG SEQADV 6D8A ASP A -1 UNP A4WYU7 EXPRESSION TAG SEQADV 6D8A ASP A 0 UNP A4WYU7 EXPRESSION TAG SEQADV 6D8A LYS A 1 UNP A4WYU7 EXPRESSION TAG SEQADV 6D8A MET F -13 UNP A4WYU7 INITIATING METHIONINE SEQADV 6D8A HIS F -12 UNP A4WYU7 EXPRESSION TAG SEQADV 6D8A HIS F -11 UNP A4WYU7 EXPRESSION TAG SEQADV 6D8A HIS F -10 UNP A4WYU7 EXPRESSION TAG SEQADV 6D8A HIS F -9 UNP A4WYU7 EXPRESSION TAG SEQADV 6D8A HIS F -8 UNP A4WYU7 EXPRESSION TAG SEQADV 6D8A HIS F -7 UNP A4WYU7 EXPRESSION TAG SEQADV 6D8A ASP F -6 UNP A4WYU7 EXPRESSION TAG SEQADV 6D8A TYR F -5 UNP A4WYU7 EXPRESSION TAG SEQADV 6D8A LYS F -4 UNP A4WYU7 EXPRESSION TAG SEQADV 6D8A ASP F -3 UNP A4WYU7 EXPRESSION TAG SEQADV 6D8A ASP F -2 UNP A4WYU7 EXPRESSION TAG SEQADV 6D8A ASP F -1 UNP A4WYU7 EXPRESSION TAG SEQADV 6D8A ASP F 0 UNP A4WYU7 EXPRESSION TAG SEQADV 6D8A LYS F 1 UNP A4WYU7 EXPRESSION TAG SEQRES 1 A 791 MET HIS HIS HIS HIS HIS HIS ASP TYR LYS ASP ASP ASP SEQRES 2 A 791 ASP LYS ALA PRO VAL GLN ALA ALA ASP GLU MET TYR ASP SEQRES 3 A 791 SER ASN PRO HIS PRO ASP ARG ARG GLN LEU VAL SER ASN SEQRES 4 A 791 GLY PHE GLU VAL ASN LEU PRO ASP GLN VAL GLU VAL ILE SEQRES 5 A 791 VAL ARG ASP LEU PRO ASP PRO SER LYS VAL LYS GLU GLU SEQRES 6 A 791 ARG THR ARG LEU MET GLY TYR TRP PHE VAL HIS TRP PHE SEQRES 7 A 791 ASP GLY LYS LEU PHE HIS LEU ARG ILE LYS ALA GLY GLY SEQRES 8 A 791 PRO ASN VAL ASP GLY GLU HIS ARG ALA ILE ARG THR ALA SEQRES 9 A 791 GLU HIS PRO TRP LEU LEU ARG ALA ARG LEU ASP ASP ALA SEQRES 10 A 791 LEU GLU GLU ALA LEU PRO LYS TYR ALA ALA VAL LYS LYS SEQRES 11 A 791 ARG PRO PHE THR PHE LEU ALA GLN LYS ASP GLU LEU ILE SEQRES 12 A 791 ASP ALA ALA ALA THR ALA ALA GLY LEU SER HIS ARG LEU SEQRES 13 A 791 LEU ASN SER PHE LYS VAL ILE PRO ARG PHE ALA LEU SER SEQRES 14 A 791 PRO LYS ILE TYR GLU PRO VAL ASP GLY THR THR ARG VAL SEQRES 15 A 791 GLY VAL PHE VAL THR ILE GLY MET ARG TYR ASP ILE GLU SEQRES 16 A 791 ALA SER LEU ARG ASP LEU LEU GLU ALA GLY ILE ASP LEU SEQRES 17 A 791 ARG GLY MET TYR VAL VAL ARG ARG LYS ARG GLN PRO GLY SEQRES 18 A 791 GLU ARG GLY LEU LEU GLY ARG VAL ARG ALA ILE SER ASP SEQRES 19 A 791 ASP MET VAL GLN LEU PHE GLU GLU THR ASP LEU ALA SER SEQRES 20 A 791 VAL ASN VAL ASN ASP ALA LYS LEU GLU GLY SER LYS GLU SEQRES 21 A 791 ASN PHE THR ARG CYS LEU SER ALA LEU LEU GLY HIS ASN SEQRES 22 A 791 TYR LYS LYS LEU LEU ASN ALA LEU ASP ASP GLN GLU ALA SEQRES 23 A 791 GLY TYR ARG THR GLY PRO ARG PHE ASP ASP ALA VAL ARG SEQRES 24 A 791 ARG MET GLY GLU PHE LEU ALA LYS LYS PRO ILE ARG LEU SEQRES 25 A 791 ALA ASP ASN ILE ASN ALA GLN VAL GLY ASP ARG ILE VAL SEQRES 26 A 791 PHE SER ASN GLU GLY GLN ALA ARG ASN VAL ARG LEU ALA SEQRES 27 A 791 PRO LYS VAL GLU TYR VAL PHE ASP ARG THR GLY ALA LYS SEQRES 28 A 791 SER ALA GLU TYR ALA TRP ARG GLY LEU SER GLN PHE GLY SEQRES 29 A 791 PRO PHE ASP ARG PRO SER PHE ALA ASN ARG SER PRO ARG SEQRES 30 A 791 ILE LEU VAL VAL TYR PRO SER SER THR GLN GLY LYS VAL SEQRES 31 A 791 GLU ASN PHE LEU SER ALA PHE ARG ASP GLY MET GLY SER SEQRES 32 A 791 ASN TYR SER GLY PHE SER LYS GLY PHE VAL ASP LEU MET SEQRES 33 A 791 GLY LEU THR LYS VAL GLU PHE VAL MET CYS PRO VAL GLU SEQRES 34 A 791 VAL SER SER ALA ASP ARG ASN GLY ALA HIS THR LYS TYR SEQRES 35 A 791 ASN SER ALA ILE GLU ASP LYS LEU ALA GLY ALA GLY GLU SEQRES 36 A 791 VAL HIS ALA GLY ILE VAL VAL LEU PHE GLU ASP HIS ALA SEQRES 37 A 791 ARG LEU PRO ASP ASP ARG ASN PRO TYR ILE HIS THR LYS SEQRES 38 A 791 SER LEU LEU LEU THR LEU GLY VAL PRO THR GLN GLN VAL SEQRES 39 A 791 ARG MET PRO THR VAL LEU LEU GLU PRO LYS SER LEU GLN SEQRES 40 A 791 TYR THR LEU GLN ASN PHE SER ILE ALA THR TYR ALA LYS SEQRES 41 A 791 LEU ASN GLY THR PRO TRP THR VAL ASN HIS ASP LYS ALA SEQRES 42 A 791 ILE ASN ASP GLU LEU VAL VAL GLY MET GLY LEU ALA GLU SEQRES 43 A 791 LEU SER GLY SER ARG THR GLU LYS ARG GLN ARG PHE VAL SEQRES 44 A 791 GLY ILE THR THR VAL PHE ALA GLY ASP GLY SER TYR LEU SEQRES 45 A 791 LEU GLY ASN VAL SER LYS GLU CYS GLU TYR GLU GLY TYR SEQRES 46 A 791 SER ASP ALA ILE ARG GLU SER MET THR GLY ILE LEU ARG SEQRES 47 A 791 GLU LEU LYS LYS ARG ASN ASN TRP ARG PRO GLY ASP THR SEQRES 48 A 791 VAL ARG VAL VAL PHE HIS ALA HIS ARG PRO LEU LYS ARG SEQRES 49 A 791 VAL ASP VAL ALA SER ILE VAL PHE GLU CYS THR ARG GLU SEQRES 50 A 791 ILE GLY SER ASP GLN ASN ILE GLN MET ALA PHE VAL THR SEQRES 51 A 791 VAL SER HIS ASP HIS PRO PHE VAL LEU ILE ASP ARG SER SEQRES 52 A 791 GLU ARG GLY LEU GLU ALA TYR LYS GLY SER THR ALA ARG SEQRES 53 A 791 LYS GLY VAL PHE ALA PRO PRO ARG GLY ALA ILE SER ARG SEQRES 54 A 791 VAL GLY ARG LEU THR ARG LEU LEU ALA VAL ASN SER PRO SEQRES 55 A 791 GLN LEU ILE LYS ARG ALA ASN THR PRO LEU PRO THR PRO SEQRES 56 A 791 LEU LEU VAL SER LEU HIS PRO ASP SER THR PHE LYS ASP SEQRES 57 A 791 VAL ASP TYR LEU ALA GLU GLN ALA LEU LYS PHE THR SER SEQRES 58 A 791 LEU SER TRP ARG SER THR LEU PRO ALA ALA THR PRO VAL SEQRES 59 A 791 THR ILE PHE TYR SER GLU ARG ILE ALA GLU LEU LEU GLY SEQRES 60 A 791 ARG LEU LYS SER ILE PRO ASN TRP SER SER ALA ASN LEU SEQRES 61 A 791 ASN ILE LYS LEU LYS TRP SER ARG TRP PHE LEU SEQRES 1 C 18 U U A C U G C A C A G G U SEQRES 2 C 18 G A C G A SEQRES 1 G 26 DC DT DG DT DC DG DT DC DA DC DC DT DG SEQRES 2 G 26 DT DG DC DA DG DA DA DT DA DA DC DT DG SEQRES 1 F 791 MET HIS HIS HIS HIS HIS HIS ASP TYR LYS ASP ASP ASP SEQRES 2 F 791 ASP LYS ALA PRO VAL GLN ALA ALA ASP GLU MET TYR ASP SEQRES 3 F 791 SER ASN PRO HIS PRO ASP ARG ARG GLN LEU VAL SER ASN SEQRES 4 F 791 GLY PHE GLU VAL ASN LEU PRO ASP GLN VAL GLU VAL ILE SEQRES 5 F 791 VAL ARG ASP LEU PRO ASP PRO SER LYS VAL LYS GLU GLU SEQRES 6 F 791 ARG THR ARG LEU MET GLY TYR TRP PHE VAL HIS TRP PHE SEQRES 7 F 791 ASP GLY LYS LEU PHE HIS LEU ARG ILE LYS ALA GLY GLY SEQRES 8 F 791 PRO ASN VAL ASP GLY GLU HIS ARG ALA ILE ARG THR ALA SEQRES 9 F 791 GLU HIS PRO TRP LEU LEU ARG ALA ARG LEU ASP ASP ALA SEQRES 10 F 791 LEU GLU GLU ALA LEU PRO LYS TYR ALA ALA VAL LYS LYS SEQRES 11 F 791 ARG PRO PHE THR PHE LEU ALA GLN LYS ASP GLU LEU ILE SEQRES 12 F 791 ASP ALA ALA ALA THR ALA ALA GLY LEU SER HIS ARG LEU SEQRES 13 F 791 LEU ASN SER PHE LYS VAL ILE PRO ARG PHE ALA LEU SER SEQRES 14 F 791 PRO LYS ILE TYR GLU PRO VAL ASP GLY THR THR ARG VAL SEQRES 15 F 791 GLY VAL PHE VAL THR ILE GLY MET ARG TYR ASP ILE GLU SEQRES 16 F 791 ALA SER LEU ARG ASP LEU LEU GLU ALA GLY ILE ASP LEU SEQRES 17 F 791 ARG GLY MET TYR VAL VAL ARG ARG LYS ARG GLN PRO GLY SEQRES 18 F 791 GLU ARG GLY LEU LEU GLY ARG VAL ARG ALA ILE SER ASP SEQRES 19 F 791 ASP MET VAL GLN LEU PHE GLU GLU THR ASP LEU ALA SER SEQRES 20 F 791 VAL ASN VAL ASN ASP ALA LYS LEU GLU GLY SER LYS GLU SEQRES 21 F 791 ASN PHE THR ARG CYS LEU SER ALA LEU LEU GLY HIS ASN SEQRES 22 F 791 TYR LYS LYS LEU LEU ASN ALA LEU ASP ASP GLN GLU ALA SEQRES 23 F 791 GLY TYR ARG THR GLY PRO ARG PHE ASP ASP ALA VAL ARG SEQRES 24 F 791 ARG MET GLY GLU PHE LEU ALA LYS LYS PRO ILE ARG LEU SEQRES 25 F 791 ALA ASP ASN ILE ASN ALA GLN VAL GLY ASP ARG ILE VAL SEQRES 26 F 791 PHE SER ASN GLU GLY GLN ALA ARG ASN VAL ARG LEU ALA SEQRES 27 F 791 PRO LYS VAL GLU TYR VAL PHE ASP ARG THR GLY ALA LYS SEQRES 28 F 791 SER ALA GLU TYR ALA TRP ARG GLY LEU SER GLN PHE GLY SEQRES 29 F 791 PRO PHE ASP ARG PRO SER PHE ALA ASN ARG SER PRO ARG SEQRES 30 F 791 ILE LEU VAL VAL TYR PRO SER SER THR GLN GLY LYS VAL SEQRES 31 F 791 GLU ASN PHE LEU SER ALA PHE ARG ASP GLY MET GLY SER SEQRES 32 F 791 ASN TYR SER GLY PHE SER LYS GLY PHE VAL ASP LEU MET SEQRES 33 F 791 GLY LEU THR LYS VAL GLU PHE VAL MET CYS PRO VAL GLU SEQRES 34 F 791 VAL SER SER ALA ASP ARG ASN GLY ALA HIS THR LYS TYR SEQRES 35 F 791 ASN SER ALA ILE GLU ASP LYS LEU ALA GLY ALA GLY GLU SEQRES 36 F 791 VAL HIS ALA GLY ILE VAL VAL LEU PHE GLU ASP HIS ALA SEQRES 37 F 791 ARG LEU PRO ASP ASP ARG ASN PRO TYR ILE HIS THR LYS SEQRES 38 F 791 SER LEU LEU LEU THR LEU GLY VAL PRO THR GLN GLN VAL SEQRES 39 F 791 ARG MET PRO THR VAL LEU LEU GLU PRO LYS SER LEU GLN SEQRES 40 F 791 TYR THR LEU GLN ASN PHE SER ILE ALA THR TYR ALA LYS SEQRES 41 F 791 LEU ASN GLY THR PRO TRP THR VAL ASN HIS ASP LYS ALA SEQRES 42 F 791 ILE ASN ASP GLU LEU VAL VAL GLY MET GLY LEU ALA GLU SEQRES 43 F 791 LEU SER GLY SER ARG THR GLU LYS ARG GLN ARG PHE VAL SEQRES 44 F 791 GLY ILE THR THR VAL PHE ALA GLY ASP GLY SER TYR LEU SEQRES 45 F 791 LEU GLY ASN VAL SER LYS GLU CYS GLU TYR GLU GLY TYR SEQRES 46 F 791 SER ASP ALA ILE ARG GLU SER MET THR GLY ILE LEU ARG SEQRES 47 F 791 GLU LEU LYS LYS ARG ASN ASN TRP ARG PRO GLY ASP THR SEQRES 48 F 791 VAL ARG VAL VAL PHE HIS ALA HIS ARG PRO LEU LYS ARG SEQRES 49 F 791 VAL ASP VAL ALA SER ILE VAL PHE GLU CYS THR ARG GLU SEQRES 50 F 791 ILE GLY SER ASP GLN ASN ILE GLN MET ALA PHE VAL THR SEQRES 51 F 791 VAL SER HIS ASP HIS PRO PHE VAL LEU ILE ASP ARG SER SEQRES 52 F 791 GLU ARG GLY LEU GLU ALA TYR LYS GLY SER THR ALA ARG SEQRES 53 F 791 LYS GLY VAL PHE ALA PRO PRO ARG GLY ALA ILE SER ARG SEQRES 54 F 791 VAL GLY ARG LEU THR ARG LEU LEU ALA VAL ASN SER PRO SEQRES 55 F 791 GLN LEU ILE LYS ARG ALA ASN THR PRO LEU PRO THR PRO SEQRES 56 F 791 LEU LEU VAL SER LEU HIS PRO ASP SER THR PHE LYS ASP SEQRES 57 F 791 VAL ASP TYR LEU ALA GLU GLN ALA LEU LYS PHE THR SER SEQRES 58 F 791 LEU SER TRP ARG SER THR LEU PRO ALA ALA THR PRO VAL SEQRES 59 F 791 THR ILE PHE TYR SER GLU ARG ILE ALA GLU LEU LEU GLY SEQRES 60 F 791 ARG LEU LYS SER ILE PRO ASN TRP SER SER ALA ASN LEU SEQRES 61 F 791 ASN ILE LYS LEU LYS TRP SER ARG TRP PHE LEU SEQRES 1 H 18 U U A C U G C A C A G G U SEQRES 2 H 18 G A C G A SEQRES 1 J 26 DC DT DG DT DC DG DT DC DA DC DC DT DG SEQRES 2 J 26 DT DG DC DA DG DA DA DT DA DA DC DT DG HET MPD A 801 22 HET MG C 101 1 HET MPD G 101 22 HET MPD F 801 22 HET MPD F 802 22 HET ACT F 803 7 HET MG H 101 1 HET MPD J 101 22 HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM MG MAGNESIUM ION HETNAM ACT ACETATE ION FORMUL 7 MPD 5(C6 H14 O2) FORMUL 8 MG 2(MG 2+) FORMUL 12 ACT C2 H3 O2 1- FORMUL 15 HOH *421(H2 O) HELIX 1 AA1 ASP A 44 SER A 46 5 3 HELIX 2 AA2 LYS A 47 LEU A 55 1 9 HELIX 3 AA3 PRO A 93 ALA A 107 1 15 HELIX 4 AA4 GLU A 127 GLY A 137 1 11 HELIX 5 AA5 LEU A 142 ASN A 144 5 3 HELIX 6 AA6 SER A 183 ALA A 190 1 8 HELIX 7 AA7 SER A 244 GLY A 257 1 14 HELIX 8 AA8 ASN A 259 THR A 276 1 18 HELIX 9 AA9 THR A 276 LYS A 293 1 18 HELIX 10 AB1 TYR A 341 GLY A 350 1 10 HELIX 11 AB2 ASP A 353 PHE A 357 5 5 HELIX 12 AB3 THR A 372 GLY A 386 1 15 HELIX 13 AB4 TYR A 391 SER A 395 5 5 HELIX 14 AB5 GLY A 397 MET A 402 1 6 HELIX 15 AB6 GLY A 423 ALA A 439 1 17 HELIX 16 AB7 PHE A 450 ALA A 454 5 5 HELIX 17 AB8 PRO A 457 ARG A 460 5 4 HELIX 18 AB9 ASN A 461 LEU A 473 1 13 HELIX 19 AC1 MET A 482 LEU A 486 1 5 HELIX 20 AC2 GLU A 488 LEU A 507 1 20 HELIX 21 AC3 GLY A 570 ASN A 591 1 22 HELIX 22 AC4 LYS A 609 GLY A 625 1 17 HELIX 23 AC5 ASP A 714 SER A 727 1 14 HELIX 24 AC6 PRO A 739 LYS A 756 1 18 HELIX 25 AC7 SER A 763 ILE A 768 5 6 HELIX 26 AC8 ASP F 44 SER F 46 5 3 HELIX 27 AC9 LYS F 47 LEU F 55 1 9 HELIX 28 AD1 PRO F 93 LEU F 108 1 16 HELIX 29 AD2 GLU F 127 GLY F 137 1 11 HELIX 30 AD3 HIS F 140 ASN F 144 5 5 HELIX 31 AD4 SER F 183 ALA F 190 1 8 HELIX 32 AD5 SER F 244 GLY F 257 1 14 HELIX 33 AD6 ASN F 259 THR F 276 1 18 HELIX 34 AD7 THR F 276 LYS F 293 1 18 HELIX 35 AD8 TYR F 341 GLY F 350 1 10 HELIX 36 AD9 THR F 372 GLY F 386 1 15 HELIX 37 AE1 GLY F 397 GLY F 403 1 7 HELIX 38 AE2 GLY F 423 GLY F 438 1 16 HELIX 39 AE3 PRO F 457 ARG F 460 5 4 HELIX 40 AE4 ASN F 461 LEU F 473 1 13 HELIX 41 AE5 MET F 482 LEU F 486 1 5 HELIX 42 AE6 GLU F 488 LEU F 507 1 20 HELIX 43 AE7 GLY F 570 ASN F 591 1 22 HELIX 44 AE8 LYS F 609 GLY F 625 1 17 HELIX 45 AE9 SER F 687 ILE F 691 5 5 HELIX 46 AF1 ASP F 714 SER F 727 1 14 HELIX 47 AF2 PRO F 739 LYS F 756 1 18 SHEET 1 AA1 7 ALA A 113 LYS A 115 0 SHEET 2 AA1 7 PHE A 119 LEU A 122 -1 O THR A 120 N LYS A 115 SHEET 3 AA1 7 PHE A 146 VAL A 162 -1 O PHE A 152 N PHE A 121 SHEET 4 AA1 7 THR A 165 ILE A 180 -1 O PHE A 171 N SER A 155 SHEET 5 AA1 7 LEU A 22 ASN A 30 -1 N PHE A 27 O VAL A 170 SHEET 6 AA1 7 ILE A 302 PHE A 312 -1 O GLN A 305 N ASN A 30 SHEET 7 AA1 7 ILE A 296 ALA A 299 -1 N ILE A 296 O ALA A 304 SHEET 1 AA2 6 ALA A 113 LYS A 115 0 SHEET 2 AA2 6 PHE A 119 LEU A 122 -1 O THR A 120 N LYS A 115 SHEET 3 AA2 6 PHE A 146 VAL A 162 -1 O PHE A 152 N PHE A 121 SHEET 4 AA2 6 THR A 165 ILE A 180 -1 O PHE A 171 N SER A 155 SHEET 5 AA2 6 LEU A 22 ASN A 30 -1 N PHE A 27 O VAL A 170 SHEET 6 AA2 6 LEU A 645 ILE A 646 -1 O ILE A 646 N VAL A 23 SHEET 1 AA3 4 TRP A 59 PHE A 64 0 SHEET 2 AA3 4 LYS A 67 ARG A 72 -1 O PHE A 69 N HIS A 62 SHEET 3 AA3 4 GLN A 34 ASP A 41 -1 N ARG A 40 O LEU A 68 SHEET 4 AA3 4 GLU A 83 ARG A 88 -1 O ARG A 85 N VAL A 37 SHEET 1 AA4 5 SER A 233 ASN A 235 0 SHEET 2 AA4 5 MET A 222 PHE A 226 -1 N VAL A 223 O VAL A 234 SHEET 3 AA4 5 LEU A 211 ILE A 218 -1 N ARG A 216 O GLN A 224 SHEET 4 AA4 5 TYR A 198 ARG A 201 -1 N VAL A 199 O LEU A 212 SHEET 5 AA4 5 ALA A 239 LEU A 241 -1 O LYS A 240 N VAL A 200 SHEET 1 AA5 9 VAL A 321 LEU A 323 0 SHEET 2 AA5 9 ALA A 672 GLY A 677 -1 O ILE A 673 N ARG A 322 SHEET 3 AA5 9 THR A 680 LEU A 683 -1 O LEU A 682 N SER A 674 SHEET 4 AA5 9 LEU A 702 LEU A 706 -1 O LEU A 702 N LEU A 683 SHEET 5 AA5 9 ASN A 629 SER A 638 -1 N THR A 636 O SER A 705 SHEET 6 AA5 9 THR A 597 ALA A 604 1 N VAL A 600 O GLN A 631 SHEET 7 AA5 9 ASP A 522 LEU A 533 1 N VAL A 526 O VAL A 601 SHEET 8 AA5 9 GLN A 542 ALA A 552 -1 O GLN A 542 N LEU A 533 SHEET 9 AA5 9 TYR A 557 VAL A 562 -1 O LEU A 558 N PHE A 551 SHEET 1 AA6 3 SER A 338 ALA A 339 0 SHEET 2 AA6 3 TYR A 329 VAL A 330 -1 N TYR A 329 O ALA A 339 SHEET 3 AA6 3 THR A 513 VAL A 514 -1 O THR A 513 N VAL A 330 SHEET 1 AA7 4 GLU A 408 VAL A 414 0 SHEET 2 AA7 4 ARG A 363 PRO A 369 1 N ILE A 364 O GLU A 408 SHEET 3 AA7 4 ALA A 444 LEU A 449 1 O VAL A 448 N VAL A 367 SHEET 4 AA7 4 THR A 477 ARG A 481 1 O GLN A 478 N GLY A 445 SHEET 1 AA8 2 LEU A 653 GLU A 654 0 SHEET 2 AA8 2 ARG A 662 LYS A 663 -1 O LYS A 663 N LEU A 653 SHEET 1 AA9 6 PHE F 119 LEU F 122 0 SHEET 2 AA9 6 PHE F 146 VAL F 162 -1 O PHE F 152 N PHE F 121 SHEET 3 AA9 6 THR F 165 ILE F 180 -1 O ASP F 179 N LYS F 147 SHEET 4 AA9 6 GLN F 21 ASN F 30 -1 N ASN F 25 O VAL F 172 SHEET 5 AA9 6 ILE F 302 SER F 313 -1 O PHE F 312 N LEU F 22 SHEET 6 AA9 6 ILE F 296 ALA F 299 -1 N ILE F 296 O ALA F 304 SHEET 1 AB1 5 PHE F 119 LEU F 122 0 SHEET 2 AB1 5 PHE F 146 VAL F 162 -1 O PHE F 152 N PHE F 121 SHEET 3 AB1 5 THR F 165 ILE F 180 -1 O ASP F 179 N LYS F 147 SHEET 4 AB1 5 GLN F 21 ASN F 30 -1 N ASN F 25 O VAL F 172 SHEET 5 AB1 5 LEU F 645 ILE F 646 -1 O ILE F 646 N VAL F 23 SHEET 1 AB2 4 TRP F 59 PHE F 64 0 SHEET 2 AB2 4 LYS F 67 ARG F 72 -1 O LEU F 71 N PHE F 60 SHEET 3 AB2 4 GLN F 34 ASP F 41 -1 N ARG F 40 O LEU F 68 SHEET 4 AB2 4 GLU F 83 ARG F 88 -1 O GLU F 83 N VAL F 39 SHEET 1 AB3 4 GLN F 224 PHE F 226 0 SHEET 2 AB3 4 LEU F 211 ALA F 217 -1 N ARG F 214 O PHE F 226 SHEET 3 AB3 4 TYR F 198 ARG F 201 -1 N VAL F 199 O LEU F 212 SHEET 4 AB3 4 ALA F 239 LEU F 241 -1 O LYS F 240 N VAL F 200 SHEET 1 AB4 9 VAL F 321 LEU F 323 0 SHEET 2 AB4 9 ALA F 672 GLY F 677 -1 O ILE F 673 N ARG F 322 SHEET 3 AB4 9 THR F 680 LEU F 683 -1 O LEU F 682 N SER F 674 SHEET 4 AB4 9 LEU F 702 LEU F 706 -1 O VAL F 704 N ARG F 681 SHEET 5 AB4 9 ASN F 629 SER F 638 -1 N SER F 638 O LEU F 703 SHEET 6 AB4 9 THR F 597 ALA F 604 1 N VAL F 598 O ASN F 629 SHEET 7 AB4 9 ASP F 522 LEU F 533 1 N LEU F 524 O VAL F 601 SHEET 8 AB4 9 GLN F 542 GLY F 553 -1 O VAL F 550 N VAL F 525 SHEET 9 AB4 9 SER F 556 VAL F 562 -1 O LEU F 558 N PHE F 551 SHEET 1 AB5 3 SER F 338 ALA F 339 0 SHEET 2 AB5 3 TYR F 329 VAL F 330 -1 N TYR F 329 O ALA F 339 SHEET 3 AB5 3 THR F 513 VAL F 514 -1 O THR F 513 N VAL F 330 SHEET 1 AB6 4 GLU F 408 VAL F 414 0 SHEET 2 AB6 4 ARG F 363 PRO F 369 1 N ILE F 364 O GLU F 408 SHEET 3 AB6 4 ALA F 444 LEU F 449 1 O ILE F 446 N LEU F 365 SHEET 4 AB6 4 THR F 477 ARG F 481 1 O VAL F 480 N LEU F 449 LINK O LEU A 777 MG MG C 101 1555 1555 2.28 LINK OXT LEU A 777 MG MG C 101 1555 1555 2.31 LINK O HOH A 915 MG MG C 101 1555 1555 2.14 LINK OP3 U C 1 MG MG C 101 1555 1555 1.93 LINK OP1 A C 3 MG MG C 101 1555 1555 1.88 LINK MG MG C 101 O HOH C 206 1555 1555 1.99 LINK O LEU F 777 MG MG H 101 1555 1555 2.18 LINK OXT LEU F 777 MG MG H 101 1555 1555 2.50 LINK O HOH F 950 MG MG H 101 1555 1555 2.03 LINK OP3 U H 1 MG MG H 101 1555 1555 2.11 LINK OP1 A H 3 MG MG H 101 1555 1555 1.78 LINK MG MG H 101 O HOH H 207 1555 1555 1.96 CISPEP 1 GLY A 77 PRO A 78 0 14.06 CISPEP 2 ARG A 117 PRO A 118 0 3.51 CISPEP 3 GLY A 257 HIS A 258 0 -8.83 CISPEP 4 GLY F 77 PRO F 78 0 2.98 CISPEP 5 ARG F 117 PRO F 118 0 26.77 CISPEP 6 GLY F 257 HIS F 258 0 5.82 CISPEP 7 LYS F 657 GLY F 658 0 0.74 SITE 1 AC1 9 PRO A 607 LEU A 608 PHE A 634 VAL A 635 SITE 2 AC1 9 THR A 636 SER A 705 LEU A 706 HIS A 707 SITE 3 AC1 9 PRO A 708 SITE 1 AC2 6 LEU A 777 HOH A 915 U C 1 U C 2 SITE 2 AC2 6 A C 3 HOH C 206 SITE 1 AC3 4 A C 3 DA G 0 DG G 1 DT G 4 SITE 1 AC4 2 LYS F 115 G H 11 SITE 1 AC5 8 GLU F 28 TYR F 159 PRO F 161 ARG F 167 SITE 2 AC5 8 ARG F 309 ILE F 310 VAL F 311 HOH F 918 SITE 1 AC6 4 MET F 528 ARG F 606 PRO F 607 G H 14 SITE 1 AC7 6 LEU F 777 HOH F 950 U H 1 U H 2 SITE 2 AC7 6 A H 3 HOH H 207 SITE 1 AC8 1 DG J -14 CRYST1 68.411 118.985 118.818 90.00 95.51 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014618 0.000000 0.001410 0.00000 SCALE2 0.000000 0.008404 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008455 0.00000