HEADER LYASE 28-APR-18 6D9F TITLE PROTEIN 60 WITH ALDEHYDE DEFORMYLATING OXIDASE ACTIVITY FROM TITLE 2 KITASATOSPORA SETAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE VLMB HOMOLOG; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KITASATOSPORA SETAE (STRAIN ATCC 33774 / DSM SOURCE 3 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054); SOURCE 4 ORGANISM_COMMON: STREPTOMYCES SETAE; SOURCE 5 ORGANISM_TAXID: 452652; SOURCE 6 STRAIN: ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 SOURCE 7 / KM-6054; SOURCE 8 GENE: VLMB, KSE_09070; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FERRITIN-LIKE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR R.ARENAS,D.K.WILSON,W.S.MAK,J.B.SIEGEL REVDAT 3 13-MAR-24 6D9F 1 REMARK REVDAT 2 25-NOV-20 6D9F 1 JRNL LINK REVDAT 1 08-MAY-19 6D9F 0 JRNL AUTH W.S.MAK,X.WANG,R.ARENAS,Y.CUI,S.BERTOLANI,W.Q.DENG, JRNL AUTH 2 I.TAGKOPOULOS,D.K.WILSON,J.B.SIEGEL JRNL TITL DISCOVERY, DESIGN, AND STRUCTURAL CHARACTERIZATION OF JRNL TITL 2 ALKANE-PRODUCING ENZYMES ACROSS THE FERRITIN-LIKE JRNL TITL 3 SUPERFAMILY. JRNL REF BIOCHEMISTRY V. 59 3834 2020 JRNL REFN ISSN 0006-2960 JRNL PMID 32935984 JRNL DOI 10.1021/ACS.BIOCHEM.0C00665 REMARK 2 REMARK 2 RESOLUTION. 2.03 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0218 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 66.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 47581 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2501 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.03 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3458 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.86 REMARK 3 BIN R VALUE (WORKING SET) : 0.3430 REMARK 3 BIN FREE R VALUE SET COUNT : 204 REMARK 3 BIN FREE R VALUE : 0.3670 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5009 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 107 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.04000 REMARK 3 B22 (A**2) : -0.02000 REMARK 3 B33 (A**2) : -0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.179 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.159 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.137 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.300 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5132 ; 0.014 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4873 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6971 ; 1.588 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11189 ; 0.884 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 641 ; 5.234 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 242 ;30.191 ;22.314 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 836 ;14.027 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 64 ;18.474 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 787 ; 0.098 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5751 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1089 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2570 ; 2.845 ; 4.099 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2569 ; 2.840 ; 4.098 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3209 ; 3.893 ; 6.137 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3210 ; 3.893 ; 6.138 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2562 ; 3.654 ; 4.610 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2562 ; 3.649 ; 4.610 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3763 ; 5.448 ; 6.749 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5959 ; 6.748 ;50.164 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5954 ; 6.749 ;50.164 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6D9F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-APR-18. REMARK 100 THE DEPOSITION ID IS D_1000234182. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JAN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50138 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.030 REMARK 200 RESOLUTION RANGE LOW (A) : 66.760 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.03 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 0.36200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.075 M TRIS HYDROCHLORIDE PH 8.5, 1.5 REMARK 280 M AMMONIUM SULFATE, 25% V/V GLYCEROL, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.81500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.36500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.51500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.36500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.81500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.51500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ALA A 3 REMARK 465 PRO A 4 REMARK 465 ASP A 326 REMARK 465 HIS A 327 REMARK 465 HIS A 328 REMARK 465 HIS A 329 REMARK 465 HIS A 330 REMARK 465 HIS A 331 REMARK 465 HIS A 332 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 ALA B 3 REMARK 465 ASP B 326 REMARK 465 HIS B 327 REMARK 465 HIS B 328 REMARK 465 HIS B 329 REMARK 465 HIS B 330 REMARK 465 HIS B 331 REMARK 465 HIS B 332 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 294 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ASP B 167 CB - CG - OD1 ANGL. DEV. = 5.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 31 52.73 -92.04 REMARK 500 ARG A 163 -70.11 -95.93 REMARK 500 ILE A 179 -76.09 -107.16 REMARK 500 ASP A 198 81.68 -158.57 REMARK 500 ALA A 276 -95.22 18.04 REMARK 500 CYS B 31 51.98 -90.16 REMARK 500 VAL B 40 -63.02 -108.79 REMARK 500 ARG B 48 22.04 -143.36 REMARK 500 ALA B 56 8.38 -64.15 REMARK 500 ILE B 179 -73.78 -106.53 REMARK 500 GLU B 270 2.64 -68.33 REMARK 500 HIS B 271 46.58 -144.22 REMARK 500 ALA B 276 -72.80 -25.84 REMARK 500 PRO B 282 133.75 -37.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 402 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 84 OE1 REMARK 620 2 GLU A 114 OE1 83.5 REMARK 620 3 HIS A 117 ND1 92.4 96.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 401 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 114 OE2 REMARK 620 2 GLU A 180 OE2 94.3 REMARK 620 3 GLU A 212 OE1 136.6 128.3 REMARK 620 4 GLU A 212 OE2 172.6 78.6 50.8 REMARK 620 5 HIS A 215 ND1 82.8 86.2 105.4 94.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE B 402 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 84 OE1 REMARK 620 2 GLU B 114 OE1 80.0 REMARK 620 3 HIS B 117 ND1 85.8 100.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE B 401 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 114 OE2 REMARK 620 2 GLU B 180 OE1 88.4 REMARK 620 3 GLU B 212 OE2 165.3 80.6 REMARK 620 4 HIS B 215 ND1 80.6 86.2 88.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE B 402 DBREF 6D9F A 1 326 UNP E4N6B3 E4N6B3_KITSK 1 326 DBREF 6D9F B 1 326 UNP E4N6B3 E4N6B3_KITSK 1 326 SEQADV 6D9F HIS A 327 UNP E4N6B3 EXPRESSION TAG SEQADV 6D9F HIS A 328 UNP E4N6B3 EXPRESSION TAG SEQADV 6D9F HIS A 329 UNP E4N6B3 EXPRESSION TAG SEQADV 6D9F HIS A 330 UNP E4N6B3 EXPRESSION TAG SEQADV 6D9F HIS A 331 UNP E4N6B3 EXPRESSION TAG SEQADV 6D9F HIS A 332 UNP E4N6B3 EXPRESSION TAG SEQADV 6D9F HIS B 327 UNP E4N6B3 EXPRESSION TAG SEQADV 6D9F HIS B 328 UNP E4N6B3 EXPRESSION TAG SEQADV 6D9F HIS B 329 UNP E4N6B3 EXPRESSION TAG SEQADV 6D9F HIS B 330 UNP E4N6B3 EXPRESSION TAG SEQADV 6D9F HIS B 331 UNP E4N6B3 EXPRESSION TAG SEQADV 6D9F HIS B 332 UNP E4N6B3 EXPRESSION TAG SEQRES 1 A 332 MET SER ALA PRO ILE PRO ALA GLU THR GLY TRP ASP SER SEQRES 2 A 332 ALA PRO GLY LEU LEU GLU GLY ALA MET THR LEU ASP LEU SEQRES 3 A 332 THR PRO GLU GLN CYS ASP LEU GLY TYR TRP LEU ARG GLY SEQRES 4 A 332 VAL ALA GLN GLY THR LEU ALA GLY ARG ALA GLU THR GLY SEQRES 5 A 332 HIS THR ASP ALA GLU PRO THR PRO GLU HIS MET ARG ALA SEQRES 6 A 332 ASP GLY PRO LEU ARG ASP ALA GLN VAL LEU GLU LEU SER SEQRES 7 A 332 CYS ARG SER VAL ALA GLU ALA GLN ALA THR ARG VAL LEU SEQRES 8 A 332 ALA HIS TYR VAL ALA GLN ALA PRO ASP ILE VAL GLU LEU SEQRES 9 A 332 GLU PHE PHE THR THR GLN LEU VAL ASP GLU ALA ARG HIS SEQRES 10 A 332 SER MET VAL PHE ARG ARG HIS LEU LEU ALA MET GLY VAL SEQRES 11 A 332 PRO ALA ASP ARG LEU HIS ALA SER ILE ALA GLU VAL SER SEQRES 12 A 332 ALA GLU TYR ARG ARG GLU VAL LEU GLU PRO ILE LEU ASP SEQRES 13 A 332 PHE ALA LEU THR THR VAL ARG ASP GLU GLY ASP PHE VAL SEQRES 14 A 332 GLY GLY VAL ALA VAL PHE THR ILE ILE ILE GLU GLY VAL SEQRES 15 A 332 LEU ALA PRO ALA ALA GLU LEU SER GLU ARG LYS TRP ASN SEQRES 16 A 332 LEU LEU ASP PRO ALA ALA GLY ALA ILE ALA ARG GLY ALA SEQRES 17 A 332 ALA ILE ASP GLU VAL ARG HIS LEU THR VAL GLY SER SER SEQRES 18 A 332 VAL VAL ARG ARG HIS LEU LEU ARG ARG PRO GLU ARG LYS SEQRES 19 A 332 ALA ALA LEU LEU ASP ILE VAL ARG ARG GLY ARG GLU ILE SEQRES 20 A 332 TRP ASP GLY ILE PRO ASP ARG LYS HIS VAL LEU ARG ARG SEQRES 21 A 332 GLU GLU LEU PHE GLN ALA GLY MET ARG GLU HIS ALA ASP SEQRES 22 A 332 LEU LEU ALA GLY TYR GLU VAL TRP PRO GLY GLN PRO LEU SEQRES 23 A 332 LEU SER THR THR PRO GLU GLN ARG TYR ALA MET ALA GLU SEQRES 24 A 332 GLN TRP THR ASP ARG MET ALA ALA ALA ARG LEU VAL HIS SEQRES 25 A 332 MET GLY LEU PRO GLU ALA ILE ASP LEU LEU ARG LEU THR SEQRES 26 A 332 ASP HIS HIS HIS HIS HIS HIS SEQRES 1 B 332 MET SER ALA PRO ILE PRO ALA GLU THR GLY TRP ASP SER SEQRES 2 B 332 ALA PRO GLY LEU LEU GLU GLY ALA MET THR LEU ASP LEU SEQRES 3 B 332 THR PRO GLU GLN CYS ASP LEU GLY TYR TRP LEU ARG GLY SEQRES 4 B 332 VAL ALA GLN GLY THR LEU ALA GLY ARG ALA GLU THR GLY SEQRES 5 B 332 HIS THR ASP ALA GLU PRO THR PRO GLU HIS MET ARG ALA SEQRES 6 B 332 ASP GLY PRO LEU ARG ASP ALA GLN VAL LEU GLU LEU SER SEQRES 7 B 332 CYS ARG SER VAL ALA GLU ALA GLN ALA THR ARG VAL LEU SEQRES 8 B 332 ALA HIS TYR VAL ALA GLN ALA PRO ASP ILE VAL GLU LEU SEQRES 9 B 332 GLU PHE PHE THR THR GLN LEU VAL ASP GLU ALA ARG HIS SEQRES 10 B 332 SER MET VAL PHE ARG ARG HIS LEU LEU ALA MET GLY VAL SEQRES 11 B 332 PRO ALA ASP ARG LEU HIS ALA SER ILE ALA GLU VAL SER SEQRES 12 B 332 ALA GLU TYR ARG ARG GLU VAL LEU GLU PRO ILE LEU ASP SEQRES 13 B 332 PHE ALA LEU THR THR VAL ARG ASP GLU GLY ASP PHE VAL SEQRES 14 B 332 GLY GLY VAL ALA VAL PHE THR ILE ILE ILE GLU GLY VAL SEQRES 15 B 332 LEU ALA PRO ALA ALA GLU LEU SER GLU ARG LYS TRP ASN SEQRES 16 B 332 LEU LEU ASP PRO ALA ALA GLY ALA ILE ALA ARG GLY ALA SEQRES 17 B 332 ALA ILE ASP GLU VAL ARG HIS LEU THR VAL GLY SER SER SEQRES 18 B 332 VAL VAL ARG ARG HIS LEU LEU ARG ARG PRO GLU ARG LYS SEQRES 19 B 332 ALA ALA LEU LEU ASP ILE VAL ARG ARG GLY ARG GLU ILE SEQRES 20 B 332 TRP ASP GLY ILE PRO ASP ARG LYS HIS VAL LEU ARG ARG SEQRES 21 B 332 GLU GLU LEU PHE GLN ALA GLY MET ARG GLU HIS ALA ASP SEQRES 22 B 332 LEU LEU ALA GLY TYR GLU VAL TRP PRO GLY GLN PRO LEU SEQRES 23 B 332 LEU SER THR THR PRO GLU GLN ARG TYR ALA MET ALA GLU SEQRES 24 B 332 GLN TRP THR ASP ARG MET ALA ALA ALA ARG LEU VAL HIS SEQRES 25 B 332 MET GLY LEU PRO GLU ALA ILE ASP LEU LEU ARG LEU THR SEQRES 26 B 332 ASP HIS HIS HIS HIS HIS HIS HET FE A 401 1 HET FE A 402 1 HET SO4 A 403 5 HET SO4 A 404 5 HET EDO A 405 4 HET EDO A 406 4 HET EDO A 407 4 HET EDO A 408 4 HET FE B 401 1 HET FE B 402 1 HETNAM FE FE (III) ION HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 FE 4(FE 3+) FORMUL 5 SO4 2(O4 S 2-) FORMUL 7 EDO 4(C2 H6 O2) FORMUL 13 HOH *107(H2 O) HELIX 1 AA1 GLY A 16 LEU A 24 1 9 HELIX 2 AA2 ASP A 32 VAL A 40 1 9 HELIX 3 AA3 PRO A 60 ARG A 64 5 5 HELIX 4 AA4 GLY A 67 GLN A 97 1 31 HELIX 5 AA5 ASP A 100 MET A 128 1 29 HELIX 6 AA6 PRO A 131 ASP A 133 5 3 HELIX 7 AA7 ARG A 134 VAL A 150 1 17 HELIX 8 AA8 VAL A 150 ARG A 163 1 14 HELIX 9 AA9 ASP A 167 ILE A 178 1 12 HELIX 10 AB1 ILE A 179 ASN A 195 1 17 HELIX 11 AB2 ASP A 198 ARG A 230 1 33 HELIX 12 AB3 ARG A 233 GLY A 250 1 18 HELIX 13 AB4 PRO A 252 GLU A 270 1 19 HELIX 14 AB5 HIS A 271 LEU A 275 5 5 HELIX 15 AB6 LEU A 287 THR A 289 5 3 HELIX 16 AB7 THR A 290 GLY A 314 1 25 HELIX 17 AB8 PRO A 316 LEU A 322 1 7 HELIX 18 AB9 GLY B 16 LEU B 24 1 9 HELIX 19 AC1 ASP B 32 VAL B 40 1 9 HELIX 20 AC2 PRO B 60 ARG B 64 5 5 HELIX 21 AC3 GLY B 67 GLN B 97 1 31 HELIX 22 AC4 ASP B 100 MET B 128 1 29 HELIX 23 AC5 PRO B 131 ASP B 133 5 3 HELIX 24 AC6 ARG B 134 VAL B 150 1 17 HELIX 25 AC7 VAL B 150 ASP B 164 1 15 HELIX 26 AC8 ASP B 167 ILE B 178 1 12 HELIX 27 AC9 ILE B 179 ASP B 198 1 20 HELIX 28 AD1 ASP B 198 ARG B 230 1 33 HELIX 29 AD2 ARG B 233 GLY B 250 1 18 HELIX 30 AD3 PRO B 252 GLU B 270 1 19 HELIX 31 AD4 THR B 290 GLY B 314 1 25 HELIX 32 AD5 PRO B 316 LEU B 322 1 7 SHEET 1 AA1 2 GLU A 279 TRP A 281 0 SHEET 2 AA1 2 GLN A 284 PRO A 285 -1 O GLN A 284 N TRP A 281 SHEET 1 AA2 2 GLU B 279 TRP B 281 0 SHEET 2 AA2 2 GLN B 284 PRO B 285 -1 O GLN B 284 N TRP B 281 LINK OE1 GLU A 84 FE FE A 402 1555 1555 2.13 LINK OE2 GLU A 114 FE FE A 401 1555 1555 2.24 LINK OE1 GLU A 114 FE FE A 402 1555 1555 1.90 LINK ND1 HIS A 117 FE FE A 402 1555 1555 2.40 LINK OE2 GLU A 180 FE FE A 401 1555 1555 2.28 LINK OE1 GLU A 212 FE FE A 401 1555 1555 2.70 LINK OE2 GLU A 212 FE FE A 401 1555 1555 2.38 LINK ND1 HIS A 215 FE FE A 401 1555 1555 2.33 LINK OE1 GLU B 84 FE FE B 402 1555 1555 2.19 LINK OE2 GLU B 114 FE FE B 401 1555 1555 2.31 LINK OE1 GLU B 114 FE FE B 402 1555 1555 1.96 LINK ND1 HIS B 117 FE FE B 402 1555 1555 2.39 LINK OE1 GLU B 180 FE FE B 401 1555 1555 2.04 LINK OE2 GLU B 212 FE FE B 401 1555 1555 2.39 LINK ND1 HIS B 215 FE FE B 401 1555 1555 2.40 SITE 1 AC1 5 GLU A 114 GLU A 180 GLU A 212 HIS A 215 SITE 2 AC1 5 FE A 402 SITE 1 AC2 5 GLU A 84 GLU A 114 HIS A 117 GLU A 212 SITE 2 AC2 5 FE A 401 SITE 1 AC3 2 ARG A 147 ARG A 148 SITE 1 AC4 3 HIS A 226 ARG A 229 ARG A 230 SITE 1 AC5 2 ARG A 70 HOH A 513 SITE 1 AC6 4 GLN A 86 GLU A 152 LEU A 155 ASP A 156 SITE 1 AC7 5 ASP A 167 HIS A 226 ARG A 233 ALA A 236 SITE 2 AC7 5 LEU A 237 SITE 1 AC8 3 HIS A 136 ASP B 100 ILE B 101 SITE 1 AC9 5 GLU B 114 GLU B 180 GLU B 212 HIS B 215 SITE 2 AC9 5 FE B 402 SITE 1 AD1 5 GLU B 84 GLU B 114 HIS B 117 GLU B 212 SITE 2 AD1 5 FE B 401 CRYST1 77.630 79.030 124.730 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012882 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012653 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008017 0.00000