HEADER TRANSFERASE 30-APR-18 6D9S TITLE THE (P)PPGPP-BOUND CRYSTAL STRUCTURE OF HPRT (HYPOXANTHINE TITLE 2 PHOSPHORIBOSYLTRANSFERASE) COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: HPRT; COMPND 5 EC: 2.4.2.8; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS ANTHRACIS; SOURCE 3 ORGANISM_TAXID: 1392; SOURCE 4 GENE: HPT, HPRT, HPT1, TILS, BA_0063, A9486_05730, ABW01_27435, SOURCE 5 BASH2_00187, BVG01_28865, CN272_24955, CN488_12230, CN504_22375, SOURCE 6 COE56_22980, COJ30_24475, COK92_19380, COL95_25280, SOURCE 7 MCCC1A01412_27610; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLIC TRPC-HA KEYWDS HPRT, HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.A.SATYSHUR,K.DUBIEL,B.ANDERSON,C.WOLAK,J.L.KECK REVDAT 4 04-OCT-23 6D9S 1 HETSYN LINK REVDAT 3 27-NOV-19 6D9S 1 REMARK REVDAT 2 13-NOV-19 6D9S 1 JRNL REVDAT 1 01-MAY-19 6D9S 0 JRNL AUTH B.W.ANDERSON,K.LIU,C.WOLAK,K.DUBIEL,F.SHE,K.A.SATYSHUR, JRNL AUTH 2 J.L.KECK,J.D.WANG JRNL TITL EVOLUTION OF (P)PPGPP-HPRT REGULATION THROUGH JRNL TITL 2 DIVERSIFICATION OF AN ALLOSTERIC OLIGOMERIC INTERACTION. JRNL REF ELIFE V. 8 2019 JRNL REFN ESSN 2050-084X JRNL PMID 31552824 JRNL DOI 10.7554/ELIFE.47534 REMARK 2 REMARK 2 RESOLUTION. 2.11 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.11 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 40414 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.910 REMARK 3 FREE R VALUE TEST SET COUNT : 1986 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.2072 - 5.0712 0.99 2941 153 0.1762 0.2003 REMARK 3 2 5.0712 - 4.0264 0.98 2788 143 0.1383 0.1712 REMARK 3 3 4.0264 - 3.5177 1.00 2797 146 0.1796 0.2456 REMARK 3 4 3.5177 - 3.1963 1.00 2768 144 0.2195 0.2909 REMARK 3 5 3.1963 - 2.9672 1.00 2766 140 0.2528 0.3277 REMARK 3 6 2.9672 - 2.7923 1.00 2769 142 0.2704 0.3487 REMARK 3 7 2.7923 - 2.6525 1.00 2738 143 0.2615 0.3123 REMARK 3 8 2.6525 - 2.5371 1.00 2742 140 0.2503 0.2771 REMARK 3 9 2.5371 - 2.4394 1.00 2734 143 0.2578 0.2720 REMARK 3 10 2.4394 - 2.3553 1.00 2703 140 0.2768 0.3298 REMARK 3 11 2.3553 - 2.2816 0.99 2743 144 0.2892 0.3020 REMARK 3 12 2.2816 - 2.2164 0.99 2715 141 0.2966 0.3425 REMARK 3 13 2.2164 - 2.1581 0.99 2704 136 0.3239 0.3751 REMARK 3 14 2.1581 - 2.1054 0.93 2520 131 0.3390 0.3390 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.490 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2995 REMARK 3 ANGLE : 0.812 4053 REMARK 3 CHIRALITY : 0.048 472 REMARK 3 PLANARITY : 0.003 488 REMARK 3 DIHEDRAL : 14.272 1814 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 0:14) REMARK 3 ORIGIN FOR THE GROUP (A): 72.9158 -21.2705 30.8960 REMARK 3 T TENSOR REMARK 3 T11: 0.8330 T22: 0.6872 REMARK 3 T33: 0.6526 T12: 0.0620 REMARK 3 T13: -0.1227 T23: -0.0688 REMARK 3 L TENSOR REMARK 3 L11: 2.2972 L22: 2.7939 REMARK 3 L33: 2.9783 L12: -0.0506 REMARK 3 L13: 1.0287 L23: 2.5857 REMARK 3 S TENSOR REMARK 3 S11: -0.4114 S12: -0.4937 S13: -0.0730 REMARK 3 S21: 0.4491 S22: 0.2882 S23: -0.5432 REMARK 3 S31: -0.1971 S32: 1.0021 S33: -0.1083 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 15:25) REMARK 3 ORIGIN FOR THE GROUP (A): 55.4947 -28.8474 32.8526 REMARK 3 T TENSOR REMARK 3 T11: 0.8133 T22: 0.6351 REMARK 3 T33: 0.5425 T12: 0.2201 REMARK 3 T13: 0.0573 T23: -0.0198 REMARK 3 L TENSOR REMARK 3 L11: 6.3487 L22: 5.4376 REMARK 3 L33: 2.4360 L12: 5.6409 REMARK 3 L13: 1.8746 L23: 0.7500 REMARK 3 S TENSOR REMARK 3 S11: 0.3011 S12: 0.0194 S13: 0.2934 REMARK 3 S21: 1.4821 S22: -0.3736 S23: 0.5490 REMARK 3 S31: -0.3570 S32: -0.5227 S33: 0.2118 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 26:36) REMARK 3 ORIGIN FOR THE GROUP (A): 43.1085 -35.8807 24.3205 REMARK 3 T TENSOR REMARK 3 T11: 0.6312 T22: 0.7767 REMARK 3 T33: 0.5841 T12: 0.1283 REMARK 3 T13: 0.0690 T23: -0.0478 REMARK 3 L TENSOR REMARK 3 L11: 2.4563 L22: 9.7084 REMARK 3 L33: 3.9474 L12: -2.9920 REMARK 3 L13: -2.6130 L23: 5.8562 REMARK 3 S TENSOR REMARK 3 S11: -0.0115 S12: -0.0720 S13: -0.0687 REMARK 3 S21: 0.4404 S22: 0.2814 S23: 0.3648 REMARK 3 S31: 0.0936 S32: -0.8902 S33: 0.0051 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 37:74) REMARK 3 ORIGIN FOR THE GROUP (A): 57.1964 -32.4149 16.4492 REMARK 3 T TENSOR REMARK 3 T11: 0.5108 T22: 0.5474 REMARK 3 T33: 0.5420 T12: 0.2246 REMARK 3 T13: -0.0072 T23: 0.0180 REMARK 3 L TENSOR REMARK 3 L11: 3.5084 L22: 0.3702 REMARK 3 L33: 6.0624 L12: 1.1956 REMARK 3 L13: -2.2592 L23: -0.3570 REMARK 3 S TENSOR REMARK 3 S11: 0.0409 S12: 0.1927 S13: 0.1700 REMARK 3 S21: 0.2268 S22: 0.0172 S23: -0.0904 REMARK 3 S31: -0.2966 S32: 0.0224 S33: -0.1339 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 75:94) REMARK 3 ORIGIN FOR THE GROUP (A): 52.7409 -30.2985 5.5886 REMARK 3 T TENSOR REMARK 3 T11: 0.5210 T22: 0.7438 REMARK 3 T33: 0.5131 T12: 0.1716 REMARK 3 T13: -0.0544 T23: -0.0138 REMARK 3 L TENSOR REMARK 3 L11: 4.6991 L22: 4.4729 REMARK 3 L33: 8.1324 L12: 4.5475 REMARK 3 L13: -5.8697 L23: -5.9496 REMARK 3 S TENSOR REMARK 3 S11: 0.3262 S12: 0.3548 S13: -0.0606 REMARK 3 S21: 0.5347 S22: -0.0102 S23: 0.2961 REMARK 3 S31: -0.6550 S32: -0.3311 S33: -0.0185 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 95:118) REMARK 3 ORIGIN FOR THE GROUP (A): 51.6497 -24.4117 11.1388 REMARK 3 T TENSOR REMARK 3 T11: 0.6296 T22: 0.7418 REMARK 3 T33: 0.6162 T12: 0.3098 REMARK 3 T13: 0.0113 T23: -0.0390 REMARK 3 L TENSOR REMARK 3 L11: 0.4487 L22: 1.5607 REMARK 3 L33: 2.9432 L12: 0.6358 REMARK 3 L13: 0.2779 L23: -0.4048 REMARK 3 S TENSOR REMARK 3 S11: -0.0221 S12: 0.2499 S13: 0.2512 REMARK 3 S21: 0.2571 S22: 0.2699 S23: 0.2264 REMARK 3 S31: -0.7590 S32: -0.4459 S33: -0.2955 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 119:140) REMARK 3 ORIGIN FOR THE GROUP (A): 50.2136 -20.4375 17.0497 REMARK 3 T TENSOR REMARK 3 T11: 0.7522 T22: 0.6188 REMARK 3 T33: 0.5097 T12: 0.3339 REMARK 3 T13: 0.0300 T23: 0.0022 REMARK 3 L TENSOR REMARK 3 L11: 5.8962 L22: 7.4466 REMARK 3 L33: 5.5759 L12: 5.0798 REMARK 3 L13: 3.0194 L23: 4.8266 REMARK 3 S TENSOR REMARK 3 S11: -0.3640 S12: -0.1142 S13: 0.7182 REMARK 3 S21: -0.4886 S22: 0.1058 S23: 0.6717 REMARK 3 S31: -1.1486 S32: -0.6883 S33: 0.1128 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 141:179) REMARK 3 ORIGIN FOR THE GROUP (A): 67.4015 -19.7993 22.9113 REMARK 3 T TENSOR REMARK 3 T11: 0.7022 T22: 0.5001 REMARK 3 T33: 0.4758 T12: 0.1509 REMARK 3 T13: -0.0116 T23: 0.0058 REMARK 3 L TENSOR REMARK 3 L11: 7.8930 L22: 2.0397 REMARK 3 L33: 2.1808 L12: -0.2642 REMARK 3 L13: -1.2264 L23: 1.0031 REMARK 3 S TENSOR REMARK 3 S11: -0.0054 S12: 0.2095 S13: 0.5795 REMARK 3 S21: -0.0221 S22: 0.1314 S23: -0.0875 REMARK 3 S31: -0.6614 S32: 0.0175 S33: -0.0886 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN B AND RESID 0:13) REMARK 3 ORIGIN FOR THE GROUP (A): 53.3328 -50.3784 -30.4139 REMARK 3 T TENSOR REMARK 3 T11: 0.6447 T22: 0.8694 REMARK 3 T33: 0.7296 T12: 0.0159 REMARK 3 T13: -0.0222 T23: -0.1545 REMARK 3 L TENSOR REMARK 3 L11: 7.7170 L22: 5.1524 REMARK 3 L33: 4.6480 L12: -3.0235 REMARK 3 L13: 4.5573 L23: -4.6283 REMARK 3 S TENSOR REMARK 3 S11: 0.2573 S12: 0.6803 S13: -0.7226 REMARK 3 S21: -0.8608 S22: 0.1445 S23: 0.3226 REMARK 3 S31: 1.1616 S32: -0.0301 S33: -0.3622 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN B AND RESID 14:31) REMARK 3 ORIGIN FOR THE GROUP (A): 50.7992 -26.9516 -29.7259 REMARK 3 T TENSOR REMARK 3 T11: 0.5748 T22: 0.8207 REMARK 3 T33: 0.5525 T12: 0.1417 REMARK 3 T13: -0.0624 T23: 0.1034 REMARK 3 L TENSOR REMARK 3 L11: 5.4320 L22: 7.5366 REMARK 3 L33: 4.6744 L12: 0.7530 REMARK 3 L13: 0.2550 L23: 5.9428 REMARK 3 S TENSOR REMARK 3 S11: -0.0260 S12: 0.4954 S13: -0.1711 REMARK 3 S21: -0.8903 S22: -0.5566 S23: 0.6405 REMARK 3 S31: -0.6756 S32: -0.7111 S33: 0.6491 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN B AND RESID 32:69) REMARK 3 ORIGIN FOR THE GROUP (A): 57.0524 -27.5151 -18.0732 REMARK 3 T TENSOR REMARK 3 T11: 0.4167 T22: 0.7275 REMARK 3 T33: 0.5243 T12: 0.1510 REMARK 3 T13: -0.0436 T23: -0.0299 REMARK 3 L TENSOR REMARK 3 L11: 2.1742 L22: 2.0820 REMARK 3 L33: 4.8864 L12: 1.7495 REMARK 3 L13: -1.3587 L23: -0.3755 REMARK 3 S TENSOR REMARK 3 S11: -0.1531 S12: 0.1336 S13: -0.0568 REMARK 3 S21: -0.0204 S22: -0.1109 S23: -0.0900 REMARK 3 S31: -0.2843 S32: -0.2391 S33: 0.2820 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN B AND RESID 70:77) REMARK 3 ORIGIN FOR THE GROUP (A): 44.2756 -41.3643 -0.3669 REMARK 3 T TENSOR REMARK 3 T11: 0.8300 T22: 1.7893 REMARK 3 T33: 0.7051 T12: -0.0757 REMARK 3 T13: 0.1704 T23: 0.1073 REMARK 3 L TENSOR REMARK 3 L11: 8.6428 L22: 6.6326 REMARK 3 L33: 2.0992 L12: -5.4256 REMARK 3 L13: 4.1439 L23: -3.2018 REMARK 3 S TENSOR REMARK 3 S11: -0.9870 S12: -0.1893 S13: -1.2356 REMARK 3 S21: 0.4119 S22: 1.3066 S23: 0.7677 REMARK 3 S31: 0.4647 S32: -4.1668 S33: -0.5512 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN B AND RESID 78:115) REMARK 3 ORIGIN FOR THE GROUP (A): 50.4634 -29.7194 -8.2690 REMARK 3 T TENSOR REMARK 3 T11: 0.4014 T22: 0.7557 REMARK 3 T33: 0.4808 T12: 0.1881 REMARK 3 T13: 0.0217 T23: -0.0453 REMARK 3 L TENSOR REMARK 3 L11: 2.2998 L22: 2.3294 REMARK 3 L33: 5.1468 L12: 0.1959 REMARK 3 L13: 0.9290 L23: -1.2188 REMARK 3 S TENSOR REMARK 3 S11: -0.0826 S12: 0.0594 S13: 0.1349 REMARK 3 S21: 0.2026 S22: 0.1793 S23: 0.2166 REMARK 3 S31: -0.3258 S32: -0.8297 S33: -0.0595 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: (CHAIN B AND RESID 116:135) REMARK 3 ORIGIN FOR THE GROUP (A): 44.8640 -28.6618 -13.3877 REMARK 3 T TENSOR REMARK 3 T11: 0.4049 T22: 0.9335 REMARK 3 T33: 0.4624 T12: 0.2112 REMARK 3 T13: 0.0559 T23: 0.0441 REMARK 3 L TENSOR REMARK 3 L11: 3.2829 L22: 7.4654 REMARK 3 L33: 8.7358 L12: -0.5991 REMARK 3 L13: 1.0314 L23: 4.7569 REMARK 3 S TENSOR REMARK 3 S11: 0.0208 S12: 0.3517 S13: 0.0954 REMARK 3 S21: -0.1773 S22: -0.3498 S23: 0.7673 REMARK 3 S31: -0.5415 S32: -1.3602 S33: 0.3395 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: (CHAIN B AND RESID 136:149) REMARK 3 ORIGIN FOR THE GROUP (A): 40.6296 -33.2312 -19.6496 REMARK 3 T TENSOR REMARK 3 T11: 0.3405 T22: 1.2142 REMARK 3 T33: 0.5818 T12: 0.2011 REMARK 3 T13: 0.0030 T23: 0.0236 REMARK 3 L TENSOR REMARK 3 L11: 3.8678 L22: 4.3640 REMARK 3 L33: 5.2049 L12: 3.5038 REMARK 3 L13: -0.1923 L23: -2.6830 REMARK 3 S TENSOR REMARK 3 S11: -0.2651 S12: -0.2111 S13: 0.1868 REMARK 3 S21: 0.3181 S22: 0.3774 S23: 0.1070 REMARK 3 S31: -0.6550 S32: -1.5589 S33: 0.0041 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: (CHAIN B AND RESID 150:179) REMARK 3 ORIGIN FOR THE GROUP (A): 51.8808 -49.3384 -22.1644 REMARK 3 T TENSOR REMARK 3 T11: 0.4763 T22: 0.7577 REMARK 3 T33: 0.5318 T12: 0.0019 REMARK 3 T13: 0.0354 T23: 0.0563 REMARK 3 L TENSOR REMARK 3 L11: 8.6295 L22: 6.1052 REMARK 3 L33: 3.2886 L12: 1.9875 REMARK 3 L13: 4.5037 L23: -1.0285 REMARK 3 S TENSOR REMARK 3 S11: 0.1703 S12: 0.0594 S13: -0.5245 REMARK 3 S21: 0.0701 S22: 0.4548 S23: 0.1826 REMARK 3 S31: 0.6253 S32: -0.6256 S33: -0.5795 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6D9S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-MAY-18. REMARK 100 THE DEPOSITION ID IS D_1000233140. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-APR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : DIAMOND(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40594 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 8.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.4100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.220 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3H83 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM TARTRATE DIBASIC, PH REMARK 280 6.6, 20% PEG3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.30533 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 116.61067 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 116.61067 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 58.30533 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -76.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 123.91650 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 -71.54322 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ASN A 180 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ASN B 180 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 72 CG ND1 CD2 CE1 NE2 REMARK 470 HIS B 72 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP B 159 O HOH B 301 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 103 -83.16 -109.25 REMARK 500 LYS A 119 39.23 73.67 REMARK 500 LYS A 131 64.14 -117.11 REMARK 500 HIS A 150 90.39 -68.15 REMARK 500 ASP B 103 -81.66 -113.92 REMARK 500 LYS B 119 37.11 73.69 REMARK 500 ASP B 138 94.37 -65.33 REMARK 500 GLU B 162 -0.54 77.60 REMARK 500 TYR B 164 0.14 82.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 159 OD1 REMARK 620 2 G4P A 201 O1C 164.1 REMARK 620 3 G4P A 201 O1D 89.2 75.4 REMARK 620 4 HOH A 325 O 96.6 85.6 83.5 REMARK 620 5 HOH A 336 O 85.0 109.9 171.4 103.4 REMARK 620 6 HOH A 343 O 82.9 91.4 83.5 167.0 89.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 159 OD1 REMARK 620 2 ASP B 159 OD2 64.4 REMARK 620 3 G4P B 201 O2D 111.5 157.9 REMARK 620 4 HOH B 301 O 61.8 95.4 101.4 REMARK 620 5 HOH B 306 O 55.8 120.1 61.3 54.9 REMARK 620 6 HOH B 333 O 123.3 98.7 101.0 67.2 110.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue G4P A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue G4P B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 204 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3H83 RELATED DB: PDB DBREF1 6D9S A 1 180 UNP A0A1S0QLD4_BACAN DBREF2 6D9S A A0A1S0QLD4 1 180 DBREF1 6D9S B 1 180 UNP A0A1S0QLD4_BACAN DBREF2 6D9S B A0A1S0QLD4 1 180 SEQADV 6D9S SER A -2 UNP A0A1S0QLD EXPRESSION TAG SEQADV 6D9S ASN A -1 UNP A0A1S0QLD EXPRESSION TAG SEQADV 6D9S ALA A 0 UNP A0A1S0QLD EXPRESSION TAG SEQADV 6D9S SER B -2 UNP A0A1S0QLD EXPRESSION TAG SEQADV 6D9S ASN B -1 UNP A0A1S0QLD EXPRESSION TAG SEQADV 6D9S ALA B 0 UNP A0A1S0QLD EXPRESSION TAG SEQRES 1 A 183 SER ASN ALA MET MET ASN GLN ASP ILE GLU LYS VAL LEU SEQRES 2 A 183 ILE SER GLU GLU GLN ILE GLN GLU LYS VAL LEU GLU LEU SEQRES 3 A 183 GLY ALA ILE ILE ALA GLU ASP TYR LYS ASN THR VAL PRO SEQRES 4 A 183 LEU ALA ILE GLY VAL LEU LYS GLY ALA MET PRO PHE MET SEQRES 5 A 183 ALA ASP LEU LEU LYS ARG THR ASP THR TYR LEU GLU MET SEQRES 6 A 183 ASP PHE MET ALA VAL SER SER TYR GLY HIS SER THR VAL SEQRES 7 A 183 SER THR GLY GLU VAL LYS ILE LEU LYS ASP LEU ASP THR SEQRES 8 A 183 SER VAL GLU GLY ARG ASP ILE LEU ILE VAL GLU ASP ILE SEQRES 9 A 183 ILE ASP SER GLY LEU THR LEU SER TYR LEU VAL ASP LEU SEQRES 10 A 183 PHE LYS TYR ARG LYS ALA LYS SER VAL LYS ILE VAL THR SEQRES 11 A 183 LEU LEU ASP LYS PRO THR GLY ARG LYS VAL ASP LEU LYS SEQRES 12 A 183 ALA ASP TYR VAL GLY PHE THR VAL PRO HIS GLU PHE VAL SEQRES 13 A 183 VAL GLY TYR GLY LEU ASP TYR LYS GLU GLN TYR ARG ASN SEQRES 14 A 183 LEU PRO TYR VAL GLY VAL LEU LYS PRO SER VAL TYR SER SEQRES 15 A 183 ASN SEQRES 1 B 183 SER ASN ALA MET MET ASN GLN ASP ILE GLU LYS VAL LEU SEQRES 2 B 183 ILE SER GLU GLU GLN ILE GLN GLU LYS VAL LEU GLU LEU SEQRES 3 B 183 GLY ALA ILE ILE ALA GLU ASP TYR LYS ASN THR VAL PRO SEQRES 4 B 183 LEU ALA ILE GLY VAL LEU LYS GLY ALA MET PRO PHE MET SEQRES 5 B 183 ALA ASP LEU LEU LYS ARG THR ASP THR TYR LEU GLU MET SEQRES 6 B 183 ASP PHE MET ALA VAL SER SER TYR GLY HIS SER THR VAL SEQRES 7 B 183 SER THR GLY GLU VAL LYS ILE LEU LYS ASP LEU ASP THR SEQRES 8 B 183 SER VAL GLU GLY ARG ASP ILE LEU ILE VAL GLU ASP ILE SEQRES 9 B 183 ILE ASP SER GLY LEU THR LEU SER TYR LEU VAL ASP LEU SEQRES 10 B 183 PHE LYS TYR ARG LYS ALA LYS SER VAL LYS ILE VAL THR SEQRES 11 B 183 LEU LEU ASP LYS PRO THR GLY ARG LYS VAL ASP LEU LYS SEQRES 12 B 183 ALA ASP TYR VAL GLY PHE THR VAL PRO HIS GLU PHE VAL SEQRES 13 B 183 VAL GLY TYR GLY LEU ASP TYR LYS GLU GLN TYR ARG ASN SEQRES 14 B 183 LEU PRO TYR VAL GLY VAL LEU LYS PRO SER VAL TYR SER SEQRES 15 B 183 ASN HET G4P A 201 47 HET MG A 202 1 HET PEG A 203 17 HET PEG A 204 17 HET PEG A 205 17 HET PEG A 206 17 HET G4P B 201 47 HET MG B 202 1 HET PEG B 203 17 HET PEG B 204 17 HETNAM G4P GUANOSINE-5',3'-TETRAPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN G4P GUANOSINE TETRAPHOSPHATE;PPGPP FORMUL 3 G4P 2(C10 H17 N5 O17 P4) FORMUL 4 MG 2(MG 2+) FORMUL 5 PEG 6(C4 H10 O3) FORMUL 13 HOH *118(H2 O) HELIX 1 AA1 MET A 1 GLN A 4 5 4 HELIX 2 AA2 SER A 12 TYR A 31 1 20 HELIX 3 AA3 ALA A 45 ARG A 55 1 11 HELIX 4 AA4 SER A 73 GLY A 78 1 6 HELIX 5 AA5 GLY A 105 ARG A 118 1 14 HELIX 6 AA6 PRO A 132 ARG A 135 5 4 HELIX 7 AA7 PRO A 175 TYR A 178 5 4 HELIX 8 AA8 MET B 1 GLN B 4 5 4 HELIX 9 AA9 SER B 12 TYR B 31 1 20 HELIX 10 AB1 ALA B 45 LYS B 54 1 10 HELIX 11 AB2 GLY B 71 GLY B 78 1 8 HELIX 12 AB3 GLY B 105 ARG B 118 1 14 HELIX 13 AB4 PRO B 132 ARG B 135 5 4 HELIX 14 AB5 PRO B 175 TYR B 178 5 4 SHEET 1 AA1 2 ILE A 6 ILE A 11 0 SHEET 2 AA1 2 VAL A 170 LEU A 173 -1 O VAL A 172 N GLU A 7 SHEET 1 AA2 6 VAL A 80 LYS A 84 0 SHEET 2 AA2 6 GLU A 61 SER A 69 -1 N SER A 68 O LYS A 81 SHEET 3 AA2 6 LEU A 37 VAL A 41 1 N ALA A 38 O GLU A 61 SHEET 4 AA2 6 ASP A 94 ILE A 102 1 O VAL A 98 N ILE A 39 SHEET 5 AA2 6 SER A 122 ASP A 130 1 O SER A 122 N ILE A 95 SHEET 6 AA2 6 TYR A 143 THR A 147 1 O PHE A 146 N LEU A 128 SHEET 1 AA3 3 ILE B 6 ILE B 11 0 SHEET 2 AA3 3 VAL B 170 LEU B 173 -1 O VAL B 170 N LEU B 10 SHEET 3 AA3 3 VAL B 153 VAL B 154 -1 N VAL B 154 O GLY B 171 SHEET 1 AA4 6 VAL B 80 LYS B 84 0 SHEET 2 AA4 6 GLU B 61 SER B 69 -1 N ALA B 66 O LEU B 83 SHEET 3 AA4 6 LEU B 37 VAL B 41 1 N ALA B 38 O GLU B 61 SHEET 4 AA4 6 ASP B 94 ILE B 102 1 O VAL B 98 N ILE B 39 SHEET 5 AA4 6 SER B 122 ASP B 130 1 O SER B 122 N ILE B 95 SHEET 6 AA4 6 TYR B 143 THR B 147 1 O TYR B 143 N ILE B 125 LINK OD1 ASP A 159 MG MG A 202 1555 1555 2.07 LINK O1C G4P A 201 MG MG A 202 1555 1555 2.00 LINK O1D G4P A 201 MG MG A 202 1555 1555 2.20 LINK MG MG A 202 O HOH A 325 1555 1555 2.05 LINK MG MG A 202 O HOH A 336 1555 1555 2.12 LINK MG MG A 202 O HOH A 343 1555 1555 2.35 LINK OD1 ASP B 159 MG MG B 202 1555 1555 1.99 LINK OD2 ASP B 159 MG MG B 202 1555 1555 2.13 LINK O2D G4P B 201 MG MG B 202 1555 1555 2.10 LINK MG MG B 202 O HOH B 301 1555 1555 2.19 LINK MG MG B 202 O HOH B 306 1555 1555 2.96 LINK MG MG B 202 O HOH B 333 1555 1555 1.96 CISPEP 1 LEU A 42 LYS A 43 0 0.19 CISPEP 2 LEU B 42 LYS B 43 0 1.02 SITE 1 AC1 24 LEU A 42 LYS A 43 GLY A 44 ILE A 101 SITE 2 AC1 24 ASP A 103 SER A 104 GLY A 105 LEU A 106 SITE 3 AC1 24 LYS A 131 GLU A 151 PHE A 152 VAL A 153 SITE 4 AC1 24 LEU A 158 ASP A 159 ARG A 165 MG A 202 SITE 5 AC1 24 HOH A 301 HOH A 304 HOH A 323 HOH A 325 SITE 6 AC1 24 HOH A 338 HOH A 343 HOH A 346 HOH A 351 SITE 1 AC2 5 ASP A 159 G4P A 201 HOH A 325 HOH A 336 SITE 2 AC2 5 HOH A 343 SITE 1 AC3 5 ASN A 3 ILE A 6 GLU A 7 VAL A 9 SITE 2 AC3 5 TYR A 169 SITE 1 AC4 2 GLN A 163 TYR A 164 SITE 1 AC5 2 GLU A 61 GLN B 163 SITE 1 AC6 21 LEU B 42 LYS B 43 GLY B 44 ILE B 101 SITE 2 AC6 21 ILE B 102 ASP B 103 SER B 104 GLY B 105 SITE 3 AC6 21 LYS B 131 PHE B 152 VAL B 153 LEU B 158 SITE 4 AC6 21 ASP B 159 ARG B 165 MG B 202 HOH B 301 SITE 5 AC6 21 HOH B 302 HOH B 305 HOH B 306 HOH B 333 SITE 6 AC6 21 HOH B 338 SITE 1 AC7 6 ASP B 159 ARG B 165 G4P B 201 HOH B 301 SITE 2 AC7 6 HOH B 306 HOH B 333 SITE 1 AC8 3 ILE B 6 VAL B 9 TYR B 169 SITE 1 AC9 5 ASP B 94 LYS B 121 SER B 122 LYS B 124 SITE 2 AC9 5 TYR B 143 CRYST1 82.611 82.611 174.916 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012105 0.006989 0.000000 0.00000 SCALE2 0.000000 0.013978 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005717 0.00000