HEADER TRANSCRIPTION/INHIBITOR 02-MAY-18 6DB0 TITLE N-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH A TETRAHYDROQUINOLINE TITLE 2 ANALOGUE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BROMODOMAIN-CONTAINING PROTEIN 2; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: O27.1.1,REALLY INTERESTING NEW GENE 3 PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BRD2, KIAA9001, RING3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A(+) KEYWDS BET, BRD2, BROMODOMAIN, INHIBITOR, COMPLEX, TRANSCRIPTION, KEYWDS 2 TRANSCRIPTION-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.W.WHITE,M.YUN REVDAT 2 04-OCT-23 6DB0 1 REMARK REVDAT 1 13-NOV-19 6DB0 0 JRNL AUTH S.W.WHITE,M.YUN JRNL TITL N-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH A JRNL TITL 2 TETRAHYDROQUINOLINE ANALOGUE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 46172 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.290 REMARK 3 FREE R VALUE TEST SET COUNT : 1982 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.4038 - 4.0955 0.96 3211 145 0.1559 0.1635 REMARK 3 2 4.0955 - 3.2518 0.97 3189 135 0.1531 0.1924 REMARK 3 3 3.2518 - 2.8411 0.99 3199 142 0.1680 0.2026 REMARK 3 4 2.8411 - 2.5814 1.00 3245 145 0.1651 0.1776 REMARK 3 5 2.5814 - 2.3965 1.00 3228 148 0.1588 0.1833 REMARK 3 6 2.3965 - 2.2552 0.93 2998 133 0.1605 0.1815 REMARK 3 7 2.2552 - 2.1423 0.96 3085 147 0.1565 0.1787 REMARK 3 8 2.1423 - 2.0491 0.97 3148 137 0.1659 0.2098 REMARK 3 9 2.0491 - 1.9702 0.98 3162 139 0.1702 0.1887 REMARK 3 10 1.9702 - 1.9022 0.98 3164 141 0.1677 0.1810 REMARK 3 11 1.9022 - 1.8428 0.98 3123 148 0.1633 0.1954 REMARK 3 12 1.8428 - 1.7901 0.99 3164 151 0.2038 0.2374 REMARK 3 13 1.7901 - 1.7430 0.98 3175 137 0.2310 0.2456 REMARK 3 14 1.7430 - 1.7004 0.96 3099 134 0.2608 0.3136 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.450 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.35 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2910 REMARK 3 ANGLE : 0.881 3943 REMARK 3 CHIRALITY : 0.051 411 REMARK 3 PLANARITY : 0.006 491 REMARK 3 DIHEDRAL : 4.314 1968 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 75 THROUGH 183) REMARK 3 ORIGIN FOR THE GROUP (A): 125.4171 5.1944 69.6662 REMARK 3 T TENSOR REMARK 3 T11: 0.1550 T22: 0.1340 REMARK 3 T33: 0.2056 T12: 0.0085 REMARK 3 T13: 0.0029 T23: 0.0016 REMARK 3 L TENSOR REMARK 3 L11: 3.0575 L22: 2.1839 REMARK 3 L33: 3.1011 L12: -0.7475 REMARK 3 L13: -0.5727 L23: 0.3770 REMARK 3 S TENSOR REMARK 3 S11: -0.0963 S12: -0.0764 S13: -0.1174 REMARK 3 S21: 0.1710 S22: 0.0118 S23: 0.2691 REMARK 3 S31: 0.1302 S32: -0.2526 S33: 0.0682 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 73 THROUGH 186) REMARK 3 ORIGIN FOR THE GROUP (A): 143.1297 7.4527 79.5193 REMARK 3 T TENSOR REMARK 3 T11: 0.2194 T22: 0.1297 REMARK 3 T33: 0.1867 T12: 0.0085 REMARK 3 T13: -0.0555 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 2.0809 L22: 3.2062 REMARK 3 L33: 3.3748 L12: -0.0702 REMARK 3 L13: 0.1186 L23: -0.1513 REMARK 3 S TENSOR REMARK 3 S11: 0.0310 S12: -0.2312 S13: 0.0707 REMARK 3 S21: 0.4073 S22: 0.0404 S23: -0.0987 REMARK 3 S31: -0.1340 S32: 0.0448 S33: -0.0891 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN 'C' AND RESID 76 THROUGH 182) REMARK 3 ORIGIN FOR THE GROUP (A): 107.1675 17.2786 92.1036 REMARK 3 T TENSOR REMARK 3 T11: 0.1344 T22: 0.2512 REMARK 3 T33: 0.1194 T12: 0.0043 REMARK 3 T13: 0.0165 T23: 0.0120 REMARK 3 L TENSOR REMARK 3 L11: 2.3049 L22: 3.6616 REMARK 3 L33: 4.2055 L12: 0.2008 REMARK 3 L13: 0.7733 L23: -0.5254 REMARK 3 S TENSOR REMARK 3 S11: -0.0225 S12: 0.1578 S13: 0.0430 REMARK 3 S21: -0.2975 S22: 0.1286 S23: 0.0031 REMARK 3 S31: -0.1157 S32: 0.0844 S33: -0.1053 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 302) REMARK 3 ORIGIN FOR THE GROUP (A): 127.3770 9.9460 56.9394 REMARK 3 T TENSOR REMARK 3 T11: 1.2667 T22: 1.0056 REMARK 3 T33: 0.6563 T12: 0.0748 REMARK 3 T13: -0.3096 T23: -0.2513 REMARK 3 L TENSOR REMARK 3 L11: 1.9574 L22: 2.7586 REMARK 3 L33: 0.9607 L12: -1.0923 REMARK 3 L13: 1.2892 L23: -0.4373 REMARK 3 S TENSOR REMARK 3 S11: 0.1374 S12: 0.0761 S13: -0.0146 REMARK 3 S21: -0.2271 S22: -0.0743 S23: 0.0103 REMARK 3 S31: -0.3164 S32: 0.0076 S33: -0.0454 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 301) REMARK 3 ORIGIN FOR THE GROUP (A): 152.5528 2.0807 69.7863 REMARK 3 T TENSOR REMARK 3 T11: 0.7000 T22: 0.6021 REMARK 3 T33: 1.3261 T12: -0.0791 REMARK 3 T13: 0.0937 T23: -0.0870 REMARK 3 L TENSOR REMARK 3 L11: 3.0084 L22: 1.3885 REMARK 3 L33: 2.1101 L12: 0.2158 REMARK 3 L13: 1.7579 L23: -1.0934 REMARK 3 S TENSOR REMARK 3 S11: -0.2230 S12: 0.1123 S13: -0.0035 REMARK 3 S21: -0.2490 S22: -0.0540 S23: -0.0502 REMARK 3 S31: 0.0963 S32: 0.1581 S33: 0.2542 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 302) REMARK 3 ORIGIN FOR THE GROUP (A): 155.6512 -4.4395 78.2460 REMARK 3 T TENSOR REMARK 3 T11: 0.7173 T22: 0.8338 REMARK 3 T33: 0.5807 T12: 0.2386 REMARK 3 T13: -0.1888 T23: 0.0681 REMARK 3 L TENSOR REMARK 3 L11: 2.2129 L22: 2.9002 REMARK 3 L33: 5.9055 L12: 2.4899 REMARK 3 L13: -3.5887 L23: -4.1293 REMARK 3 S TENSOR REMARK 3 S11: -0.1071 S12: 0.4731 S13: 0.1208 REMARK 3 S21: -0.2627 S22: -0.0910 S23: -0.3485 REMARK 3 S31: 0.2042 S32: 0.0065 S33: 0.1908 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6DB0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-MAY-18. REMARK 100 THE DEPOSITION ID IS D_1000234265. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-FEB-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46199 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.72400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4UYH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, AMMONIUM SULFATE, HEPES, PH REMARK 280 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 57.15800 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.89800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 57.15800 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 27.89800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 212.25544 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 204.43411 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C 442 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 63 REMARK 465 SER A 64 REMARK 465 HIS A 65 REMARK 465 MET A 66 REMARK 465 SER A 67 REMARK 465 ASN A 68 REMARK 465 PRO A 69 REMARK 465 LYS A 70 REMARK 465 LYS A 71 REMARK 465 PRO A 72 REMARK 465 GLY A 73 REMARK 465 ARG A 74 REMARK 465 GLU A 184 REMARK 465 GLN A 185 REMARK 465 GLU A 186 REMARK 465 LEU A 187 REMARK 465 VAL A 188 REMARK 465 VAL A 189 REMARK 465 THR A 190 REMARK 465 ILE A 191 REMARK 465 PRO A 192 REMARK 465 LYS A 193 REMARK 465 ASN A 194 REMARK 465 SER A 195 REMARK 465 HIS A 196 REMARK 465 LYS A 197 REMARK 465 LYS A 198 REMARK 465 GLY A 199 REMARK 465 ALA A 200 REMARK 465 GLY B 63 REMARK 465 SER B 64 REMARK 465 HIS B 65 REMARK 465 MET B 66 REMARK 465 SER B 67 REMARK 465 ASN B 68 REMARK 465 PRO B 69 REMARK 465 LYS B 70 REMARK 465 LYS B 71 REMARK 465 LEU B 187 REMARK 465 VAL B 188 REMARK 465 VAL B 189 REMARK 465 THR B 190 REMARK 465 ILE B 191 REMARK 465 PRO B 192 REMARK 465 LYS B 193 REMARK 465 ASN B 194 REMARK 465 SER B 195 REMARK 465 HIS B 196 REMARK 465 LYS B 197 REMARK 465 LYS B 198 REMARK 465 GLY B 199 REMARK 465 ALA B 200 REMARK 465 GLY C 63 REMARK 465 SER C 64 REMARK 465 HIS C 65 REMARK 465 MET C 66 REMARK 465 SER C 67 REMARK 465 ASN C 68 REMARK 465 PRO C 69 REMARK 465 LYS C 70 REMARK 465 LYS C 71 REMARK 465 PRO C 72 REMARK 465 GLY C 73 REMARK 465 ARG C 74 REMARK 465 VAL C 75 REMARK 465 GLU C 183 REMARK 465 GLU C 184 REMARK 465 GLN C 185 REMARK 465 GLU C 186 REMARK 465 LEU C 187 REMARK 465 VAL C 188 REMARK 465 VAL C 189 REMARK 465 THR C 190 REMARK 465 ILE C 191 REMARK 465 PRO C 192 REMARK 465 LYS C 193 REMARK 465 ASN C 194 REMARK 465 SER C 195 REMARK 465 HIS C 196 REMARK 465 LYS C 197 REMARK 465 LYS C 198 REMARK 465 GLY C 199 REMARK 465 ALA C 200 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 75 CG1 CG2 REMARK 470 GLU A 183 CG CD OE1 OE2 REMARK 470 GLU B 183 CG CD OE1 OE2 REMARK 470 GLN B 185 CG CD OE1 NE2 REMARK 470 THR C 76 OG1 CG2 REMARK 470 GLN C 119 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU C 110 72.57 -117.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue G3J A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue G3J B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EPE B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 301 DBREF 6DB0 A 67 200 UNP P25440 BRD2_HUMAN 20 153 DBREF 6DB0 B 67 200 UNP P25440 BRD2_HUMAN 20 153 DBREF 6DB0 C 67 200 UNP P25440 BRD2_HUMAN 20 153 SEQADV 6DB0 GLY A 63 UNP P25440 EXPRESSION TAG SEQADV 6DB0 SER A 64 UNP P25440 EXPRESSION TAG SEQADV 6DB0 HIS A 65 UNP P25440 EXPRESSION TAG SEQADV 6DB0 MET A 66 UNP P25440 EXPRESSION TAG SEQADV 6DB0 GLY B 63 UNP P25440 EXPRESSION TAG SEQADV 6DB0 SER B 64 UNP P25440 EXPRESSION TAG SEQADV 6DB0 HIS B 65 UNP P25440 EXPRESSION TAG SEQADV 6DB0 MET B 66 UNP P25440 EXPRESSION TAG SEQADV 6DB0 GLY C 63 UNP P25440 EXPRESSION TAG SEQADV 6DB0 SER C 64 UNP P25440 EXPRESSION TAG SEQADV 6DB0 HIS C 65 UNP P25440 EXPRESSION TAG SEQADV 6DB0 MET C 66 UNP P25440 EXPRESSION TAG SEQRES 1 A 138 GLY SER HIS MET SER ASN PRO LYS LYS PRO GLY ARG VAL SEQRES 2 A 138 THR ASN GLN LEU GLN TYR LEU HIS LYS VAL VAL MET LYS SEQRES 3 A 138 ALA LEU TRP LYS HIS GLN PHE ALA TRP PRO PHE ARG GLN SEQRES 4 A 138 PRO VAL ASP ALA VAL LYS LEU GLY LEU PRO ASP TYR HIS SEQRES 5 A 138 LYS ILE ILE LYS GLN PRO MET ASP MET GLY THR ILE LYS SEQRES 6 A 138 ARG ARG LEU GLU ASN ASN TYR TYR TRP ALA ALA SER GLU SEQRES 7 A 138 CYS MET GLN ASP PHE ASN THR MET PHE THR ASN CYS TYR SEQRES 8 A 138 ILE TYR ASN LYS PRO THR ASP ASP ILE VAL LEU MET ALA SEQRES 9 A 138 GLN THR LEU GLU LYS ILE PHE LEU GLN LYS VAL ALA SER SEQRES 10 A 138 MET PRO GLN GLU GLU GLN GLU LEU VAL VAL THR ILE PRO SEQRES 11 A 138 LYS ASN SER HIS LYS LYS GLY ALA SEQRES 1 B 138 GLY SER HIS MET SER ASN PRO LYS LYS PRO GLY ARG VAL SEQRES 2 B 138 THR ASN GLN LEU GLN TYR LEU HIS LYS VAL VAL MET LYS SEQRES 3 B 138 ALA LEU TRP LYS HIS GLN PHE ALA TRP PRO PHE ARG GLN SEQRES 4 B 138 PRO VAL ASP ALA VAL LYS LEU GLY LEU PRO ASP TYR HIS SEQRES 5 B 138 LYS ILE ILE LYS GLN PRO MET ASP MET GLY THR ILE LYS SEQRES 6 B 138 ARG ARG LEU GLU ASN ASN TYR TYR TRP ALA ALA SER GLU SEQRES 7 B 138 CYS MET GLN ASP PHE ASN THR MET PHE THR ASN CYS TYR SEQRES 8 B 138 ILE TYR ASN LYS PRO THR ASP ASP ILE VAL LEU MET ALA SEQRES 9 B 138 GLN THR LEU GLU LYS ILE PHE LEU GLN LYS VAL ALA SER SEQRES 10 B 138 MET PRO GLN GLU GLU GLN GLU LEU VAL VAL THR ILE PRO SEQRES 11 B 138 LYS ASN SER HIS LYS LYS GLY ALA SEQRES 1 C 138 GLY SER HIS MET SER ASN PRO LYS LYS PRO GLY ARG VAL SEQRES 2 C 138 THR ASN GLN LEU GLN TYR LEU HIS LYS VAL VAL MET LYS SEQRES 3 C 138 ALA LEU TRP LYS HIS GLN PHE ALA TRP PRO PHE ARG GLN SEQRES 4 C 138 PRO VAL ASP ALA VAL LYS LEU GLY LEU PRO ASP TYR HIS SEQRES 5 C 138 LYS ILE ILE LYS GLN PRO MET ASP MET GLY THR ILE LYS SEQRES 6 C 138 ARG ARG LEU GLU ASN ASN TYR TYR TRP ALA ALA SER GLU SEQRES 7 C 138 CYS MET GLN ASP PHE ASN THR MET PHE THR ASN CYS TYR SEQRES 8 C 138 ILE TYR ASN LYS PRO THR ASP ASP ILE VAL LEU MET ALA SEQRES 9 C 138 GLN THR LEU GLU LYS ILE PHE LEU GLN LYS VAL ALA SER SEQRES 10 C 138 MET PRO GLN GLU GLU GLN GLU LEU VAL VAL THR ILE PRO SEQRES 11 C 138 LYS ASN SER HIS LYS LYS GLY ALA HET SO4 A 301 5 HET G3J A 302 27 HET G3J B 301 27 HET EPE B 302 15 HET EDO C 301 4 HETNAM SO4 SULFATE ION HETNAM G3J 1-[(2S,4R)-4-[(2-CHLOROPHENYL)AMINO]-2-METHYL-6-(1H- HETNAM 2 G3J PYRAZOL-3-YL)-3,4-DIHYDROQUINOLIN-1(2H)-YL]ETHAN-1-ONE HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETNAM EDO 1,2-ETHANEDIOL HETSYN EPE HEPES HETSYN EDO ETHYLENE GLYCOL FORMUL 4 SO4 O4 S 2- FORMUL 5 G3J 2(C21 H21 CL N4 O) FORMUL 7 EPE C8 H18 N2 O4 S FORMUL 8 EDO C2 H6 O2 FORMUL 9 HOH *202(H2 O) HELIX 1 AA1 THR A 76 VAL A 85 1 10 HELIX 2 AA2 VAL A 85 LYS A 92 1 8 HELIX 3 AA3 ALA A 96 ARG A 100 5 5 HELIX 4 AA4 ASP A 104 GLY A 109 1 6 HELIX 5 AA5 ASP A 112 ILE A 117 1 6 HELIX 6 AA6 ASP A 122 ASN A 132 1 11 HELIX 7 AA7 ALA A 137 ASN A 156 1 20 HELIX 8 AA8 ASP A 160 ALA A 178 1 19 HELIX 9 AA9 THR B 76 VAL B 85 1 10 HELIX 10 AB1 VAL B 85 LYS B 92 1 8 HELIX 11 AB2 ALA B 96 ARG B 100 5 5 HELIX 12 AB3 ASP B 104 GLY B 109 1 6 HELIX 13 AB4 ASP B 112 ILE B 117 1 6 HELIX 14 AB5 ASP B 122 ASN B 132 1 11 HELIX 15 AB6 ALA B 137 ASN B 156 1 20 HELIX 16 AB7 ASP B 160 ALA B 178 1 19 HELIX 17 AB8 ASN C 77 VAL C 85 1 9 HELIX 18 AB9 VAL C 85 LYS C 92 1 8 HELIX 19 AC1 ALA C 96 ARG C 100 5 5 HELIX 20 AC2 ASP C 112 ILE C 117 1 6 HELIX 21 AC3 ASP C 122 ASN C 132 1 11 HELIX 22 AC4 ALA C 137 ASN C 156 1 20 HELIX 23 AC5 ASP C 160 SER C 179 1 20 SITE 1 AC1 4 ARG A 100 HOH A 411 HOH A 434 HOH A 457 SITE 1 AC2 10 TRP A 97 PRO A 98 PHE A 99 LYS A 107 SITE 2 AC2 10 LEU A 108 LEU A 110 ASN A 156 ILE A 162 SITE 3 AC2 10 HOH A 408 GLN B 94 SITE 1 AC3 12 GLN A 94 TRP B 97 PRO B 98 PHE B 99 SITE 2 AC3 12 LEU B 108 LEU B 110 ASN B 156 ILE B 162 SITE 3 AC3 12 EPE B 302 HOH B 405 HOH B 443 HOH B 462 SITE 1 AC4 10 TRP B 97 ARG B 100 G3J B 301 HOH B 403 SITE 2 AC4 10 HOH B 414 HOH B 450 ARG C 128 ARG C 129 SITE 3 AC4 10 ASN C 132 TYR C 134 SITE 1 AC5 3 TYR C 113 ASN C 156 HOH C 403 CRYST1 114.316 55.796 68.363 90.00 94.58 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008748 0.000000 0.000701 0.00000 SCALE2 0.000000 0.017922 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014675 0.00000