data_6DBE # _entry.id 6DBE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6DBE pdb_00006dbe 10.2210/pdb6dbe/pdb WWPDB D_1000234315 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'VHH isolated from same library' 6DBA unspecified PDB 'VHH isolated from same library' 6DBD unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6DBE _pdbx_database_status.recvd_initial_deposition_date 2018-05-03 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Brooks, C.L.' 1 ? 'Toride King, M.' 2 ? 'Huh, I.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J. Biol. Chem.' _citation.journal_id_ASTM JBCHA3 _citation.journal_id_CSD 0071 _citation.journal_id_ISSN 1083-351X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 293 _citation.language ? _citation.page_first 13626 _citation.page_last 13635 _citation.title 'Structural basis of VHH-mediated neutralization of the food-borne pathogenListeria monocytogenes.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1074/jbc.RA118.003888 _citation.pdbx_database_id_PubMed 29976754 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'King, M.T.' 1 ? primary 'Huh, I.' 2 ? primary 'Shenai, A.' 3 ? primary 'Brooks, T.M.' 4 ? primary 'Brooks, C.L.' 5 0000-0002-6745-6526 # _cell.entry_id 6DBE _cell.length_a 58.615 _cell.length_b 58.615 _cell.length_c 100.527 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6DBE _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'nanobody VHH R303' 15397.870 2 ? ? ? ? 2 non-polymer syn '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 238.305 1 ? ? ? ? 3 water nat water 18.015 167 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;QVKLEESGGGLVQAGGSLRLSCAASGSTFSIYTMGWFRQAPGKEREFVADISWNGGSTYYADSVKGRFTIYRDNYKNTVY LQMNSLKPEDTAVYYCNADDLMIDRDYWGQGTQVTVSSGSEQKLISEEDLNHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;QVKLEESGGGLVQAGGSLRLSCAASGSTFSIYTMGWFRQAPGKEREFVADISWNGGSTYYADSVKGRFTIYRDNYKNTVY LQMNSLKPEDTAVYYCNADDLMIDRDYWGQGTQVTVSSGSEQKLISEEDLNHHHHHH ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 VAL n 1 3 LYS n 1 4 LEU n 1 5 GLU n 1 6 GLU n 1 7 SER n 1 8 GLY n 1 9 GLY n 1 10 GLY n 1 11 LEU n 1 12 VAL n 1 13 GLN n 1 14 ALA n 1 15 GLY n 1 16 GLY n 1 17 SER n 1 18 LEU n 1 19 ARG n 1 20 LEU n 1 21 SER n 1 22 CYS n 1 23 ALA n 1 24 ALA n 1 25 SER n 1 26 GLY n 1 27 SER n 1 28 THR n 1 29 PHE n 1 30 SER n 1 31 ILE n 1 32 TYR n 1 33 THR n 1 34 MET n 1 35 GLY n 1 36 TRP n 1 37 PHE n 1 38 ARG n 1 39 GLN n 1 40 ALA n 1 41 PRO n 1 42 GLY n 1 43 LYS n 1 44 GLU n 1 45 ARG n 1 46 GLU n 1 47 PHE n 1 48 VAL n 1 49 ALA n 1 50 ASP n 1 51 ILE n 1 52 SER n 1 53 TRP n 1 54 ASN n 1 55 GLY n 1 56 GLY n 1 57 SER n 1 58 THR n 1 59 TYR n 1 60 TYR n 1 61 ALA n 1 62 ASP n 1 63 SER n 1 64 VAL n 1 65 LYS n 1 66 GLY n 1 67 ARG n 1 68 PHE n 1 69 THR n 1 70 ILE n 1 71 TYR n 1 72 ARG n 1 73 ASP n 1 74 ASN n 1 75 TYR n 1 76 LYS n 1 77 ASN n 1 78 THR n 1 79 VAL n 1 80 TYR n 1 81 LEU n 1 82 GLN n 1 83 MET n 1 84 ASN n 1 85 SER n 1 86 LEU n 1 87 LYS n 1 88 PRO n 1 89 GLU n 1 90 ASP n 1 91 THR n 1 92 ALA n 1 93 VAL n 1 94 TYR n 1 95 TYR n 1 96 CYS n 1 97 ASN n 1 98 ALA n 1 99 ASP n 1 100 ASP n 1 101 LEU n 1 102 MET n 1 103 ILE n 1 104 ASP n 1 105 ARG n 1 106 ASP n 1 107 TYR n 1 108 TRP n 1 109 GLY n 1 110 GLN n 1 111 GLY n 1 112 THR n 1 113 GLN n 1 114 VAL n 1 115 THR n 1 116 VAL n 1 117 SER n 1 118 SER n 1 119 GLY n 1 120 SER n 1 121 GLU n 1 122 GLN n 1 123 LYS n 1 124 LEU n 1 125 ILE n 1 126 SER n 1 127 GLU n 1 128 GLU n 1 129 ASP n 1 130 LEU n 1 131 ASN n 1 132 HIS n 1 133 HIS n 1 134 HIS n 1 135 HIS n 1 136 HIS n 1 137 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 137 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Lama glama' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9844 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain TG1 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pSJF2H _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6DBE _struct_ref.pdbx_db_accession 6DBE _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6DBE A 1 ? 137 ? 6DBE 1 ? 137 ? 1 137 2 1 6DBE B 1 ? 137 ? 6DBE 1 ? 137 ? 1 137 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EPE non-polymer . '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' HEPES 'C8 H18 N2 O4 S' 238.305 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6DBE _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.62 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 24.02 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1M HEPES, 25% PEG 3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details 'Vertical Focusing Mirror: ultra-low expansion (ULE) titanium siliicate flat mirror with Pt, Uncoated, and Pd strips' _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX-300' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2012-12-12 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ;ACCEL/BRUKER double crystal monochromator (DCM), featuring indirectly cryo-cooled first crystal and sagittally focusing second crystal ; _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97950 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'CLSI BEAMLINE 08ID-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97950 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 08ID-1 _diffrn_source.pdbx_synchrotron_site CLSI # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6DBE _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.650 _reflns.d_resolution_low 50.760 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 24176 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.400 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.500 _reflns.pdbx_Rmerge_I_obs 0.100 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 9.500 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.650 1.690 ? 3.800 ? ? ? ? ? 95.100 ? ? ? ? 0.497 ? ? ? ? ? ? ? ? 3.900 ? ? ? ? ? ? ? 1 1 ? ? 7.380 50.760 ? 11.400 ? ? ? ? ? 73.900 ? ? ? ? 0.050 ? ? ? ? ? ? ? ? 3.200 ? ? ? ? ? ? ? 2 1 ? ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 6DBE _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 24176 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.33 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 45.313 _refine.ls_d_res_high 1.650 _refine.ls_percent_reflns_obs 97.83 _refine.ls_R_factor_obs 0.1868 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1850 _refine.ls_R_factor_R_free 0.2227 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.10 _refine.ls_number_reflns_R_free 1233 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 6DBA _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.19 _refine.pdbx_overall_phase_error 20.57 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1752 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 15 _refine_hist.number_atoms_solvent 167 _refine_hist.number_atoms_total 1934 _refine_hist.d_res_high 1.650 _refine_hist.d_res_low 45.313 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.010 ? ? 1830 'X-RAY DIFFRACTION' ? f_angle_d 1.152 ? ? 2484 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 12.577 ? ? 1077 'X-RAY DIFFRACTION' ? f_chiral_restr 0.060 ? ? 258 'X-RAY DIFFRACTION' ? f_plane_restr 0.007 ? ? 318 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 1.6500 1.7161 2441 0.2485 95.00 0.2911 . . 132 . . . . 'X-RAY DIFFRACTION' . 1.7161 1.7942 2526 0.2162 100.00 0.2610 . . 155 . . . . 'X-RAY DIFFRACTION' . 1.7942 1.8888 2564 0.1919 100.00 0.2434 . . 151 . . . . 'X-RAY DIFFRACTION' . 1.8888 2.0071 2564 0.1786 100.00 0.2003 . . 139 . . . . 'X-RAY DIFFRACTION' . 2.0071 2.1621 2562 0.1789 100.00 0.2611 . . 144 . . . . 'X-RAY DIFFRACTION' . 2.1621 2.3797 2594 0.1867 100.00 0.2447 . . 123 . . . . 'X-RAY DIFFRACTION' . 2.3797 2.7240 2573 0.1875 99.00 0.2161 . . 143 . . . . 'X-RAY DIFFRACTION' . 2.7240 3.4317 2634 0.1742 98.00 0.2027 . . 123 . . . . 'X-RAY DIFFRACTION' . 3.4317 45.3299 2485 0.1830 90.00 0.2094 . . 123 . . . . # _struct.entry_id 6DBE _struct.title 'Crystal Structure of VHH R330' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6DBE _struct_keywords.text 'nanobody VHH Listeria, IMMUNE SYSTEM' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LYS A 87 ? THR A 91 ? LYS A 87 THR A 91 5 ? 5 HELX_P HELX_P2 AA2 ASP B 62 ? LYS B 65 ? ASP B 62 LYS B 65 5 ? 4 HELX_P HELX_P3 AA3 LYS B 87 ? THR B 91 ? LYS B 87 THR B 91 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 22 SG ? ? ? 1_555 A CYS 96 SG A ? A CYS 22 A CYS 96 1_555 ? ? ? ? ? ? ? 2.004 ? ? disulf2 disulf ? ? A CYS 22 SG ? ? ? 1_555 A CYS 96 SG B ? A CYS 22 A CYS 96 1_555 ? ? ? ? ? ? ? 2.091 ? ? disulf3 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 96 SG A ? B CYS 22 B CYS 96 1_555 ? ? ? ? ? ? ? 2.072 ? ? disulf4 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 96 SG B ? B CYS 22 B CYS 96 1_555 ? ? ? ? ? ? ? 2.025 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 6 ? AA3 ? 4 ? AA4 ? 4 ? AA5 ? 6 ? AA6 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA5 4 5 ? anti-parallel AA5 5 6 ? anti-parallel AA6 1 2 ? parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LYS A 3 ? SER A 7 ? LYS A 3 SER A 7 AA1 2 LEU A 18 ? SER A 25 ? LEU A 18 SER A 25 AA1 3 THR A 78 ? MET A 83 ? THR A 78 MET A 83 AA1 4 PHE A 68 ? ASP A 73 ? PHE A 68 ASP A 73 AA2 1 GLY A 10 ? GLN A 13 ? GLY A 10 GLN A 13 AA2 2 THR A 112 ? SER A 117 ? THR A 112 SER A 117 AA2 3 ALA A 92 ? ASP A 100 ? ALA A 92 ASP A 100 AA2 4 TYR A 32 ? GLN A 39 ? TYR A 32 GLN A 39 AA2 5 ARG A 45 ? ILE A 51 ? ARG A 45 ILE A 51 AA2 6 THR A 58 ? TYR A 60 ? THR A 58 TYR A 60 AA3 1 GLY A 10 ? GLN A 13 ? GLY A 10 GLN A 13 AA3 2 THR A 112 ? SER A 117 ? THR A 112 SER A 117 AA3 3 ALA A 92 ? ASP A 100 ? ALA A 92 ASP A 100 AA3 4 ARG A 105 ? TRP A 108 ? ARG A 105 TRP A 108 AA4 1 LYS B 3 ? SER B 7 ? LYS B 3 SER B 7 AA4 2 LEU B 18 ? SER B 25 ? LEU B 18 SER B 25 AA4 3 VAL B 79 ? MET B 83 ? VAL B 79 MET B 83 AA4 4 PHE B 68 ? ARG B 72 ? PHE B 68 ARG B 72 AA5 1 GLY B 10 ? GLN B 13 ? GLY B 10 GLN B 13 AA5 2 THR B 112 ? SER B 117 ? THR B 112 SER B 117 AA5 3 ALA B 92 ? ASP B 100 ? ALA B 92 ASP B 100 AA5 4 TYR B 32 ? GLN B 39 ? TYR B 32 GLN B 39 AA5 5 GLU B 46 ? ILE B 51 ? GLU B 46 ILE B 51 AA5 6 THR B 58 ? TYR B 60 ? THR B 58 TYR B 60 AA6 1 GLY B 10 ? GLN B 13 ? GLY B 10 GLN B 13 AA6 2 THR B 112 ? SER B 117 ? THR B 112 SER B 117 AA6 3 ALA B 92 ? ASP B 100 ? ALA B 92 ASP B 100 AA6 4 ARG B 105 ? TRP B 108 ? ARG B 105 TRP B 108 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLU A 5 ? N GLU A 5 O ALA A 23 ? O ALA A 23 AA1 2 3 N LEU A 18 ? N LEU A 18 O MET A 83 ? O MET A 83 AA1 3 4 O GLN A 82 ? O GLN A 82 N THR A 69 ? N THR A 69 AA2 1 2 N GLY A 10 ? N GLY A 10 O GLN A 113 ? O GLN A 113 AA2 2 3 O THR A 112 ? O THR A 112 N TYR A 94 ? N TYR A 94 AA2 3 4 O TYR A 95 ? O TYR A 95 N PHE A 37 ? N PHE A 37 AA2 4 5 N ARG A 38 ? N ARG A 38 O GLU A 46 ? O GLU A 46 AA2 5 6 N ASP A 50 ? N ASP A 50 O TYR A 59 ? O TYR A 59 AA3 1 2 N GLY A 10 ? N GLY A 10 O GLN A 113 ? O GLN A 113 AA3 2 3 O THR A 112 ? O THR A 112 N TYR A 94 ? N TYR A 94 AA3 3 4 N ASP A 100 ? N ASP A 100 O ARG A 105 ? O ARG A 105 AA4 1 2 N LYS B 3 ? N LYS B 3 O SER B 25 ? O SER B 25 AA4 2 3 N LEU B 18 ? N LEU B 18 O MET B 83 ? O MET B 83 AA4 3 4 O TYR B 80 ? O TYR B 80 N TYR B 71 ? N TYR B 71 AA5 1 2 N VAL B 12 ? N VAL B 12 O THR B 115 ? O THR B 115 AA5 2 3 O THR B 112 ? O THR B 112 N TYR B 94 ? N TYR B 94 AA5 3 4 O ASP B 99 ? O ASP B 99 N THR B 33 ? N THR B 33 AA5 4 5 N ARG B 38 ? N ARG B 38 O GLU B 46 ? O GLU B 46 AA5 5 6 N ASP B 50 ? N ASP B 50 O TYR B 59 ? O TYR B 59 AA6 1 2 N VAL B 12 ? N VAL B 12 O THR B 115 ? O THR B 115 AA6 2 3 O THR B 112 ? O THR B 112 N TYR B 94 ? N TYR B 94 AA6 3 4 N ASP B 100 ? N ASP B 100 O ARG B 105 ? O ARG B 105 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id B _struct_site.pdbx_auth_comp_id EPE _struct_site.pdbx_auth_seq_id 201 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 8 _struct_site.details 'binding site for residue EPE B 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 PHE A 47 ? PHE A 47 . ? 1_555 ? 2 AC1 8 ASP A 50 ? ASP A 50 . ? 1_555 ? 3 AC1 8 THR B 33 ? THR B 33 . ? 1_555 ? 4 AC1 8 ASP B 50 ? ASP B 50 . ? 1_555 ? 5 AC1 8 SER B 52 ? SER B 52 . ? 1_555 ? 6 AC1 8 TYR B 59 ? TYR B 59 . ? 1_555 ? 7 AC1 8 HOH E . ? HOH B 301 . ? 1_555 ? 8 AC1 8 HOH E . ? HOH B 319 . ? 1_555 ? # _atom_sites.entry_id 6DBE _atom_sites.fract_transf_matrix[1][1] 0.017060 _atom_sites.fract_transf_matrix[1][2] 0.009850 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019700 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009948 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 1 ? ? ? A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 LYS 3 3 3 LYS LYS A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 GLN 13 13 13 GLN GLN A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 ARG 19 19 19 ARG ARG A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 CYS 22 22 22 CYS CYS A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 SER 27 27 ? ? ? A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 PHE 29 29 29 PHE PHE A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 ILE 31 31 31 ILE ILE A . n A 1 32 TYR 32 32 32 TYR TYR A . n A 1 33 THR 33 33 33 THR THR A . n A 1 34 MET 34 34 34 MET MET A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 TRP 36 36 36 TRP TRP A . n A 1 37 PHE 37 37 37 PHE PHE A . n A 1 38 ARG 38 38 38 ARG ARG A . n A 1 39 GLN 39 39 39 GLN GLN A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 PRO 41 41 41 PRO PRO A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 ARG 45 45 45 ARG ARG A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 PHE 47 47 47 PHE PHE A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 ILE 51 51 51 ILE ILE A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 TRP 53 53 53 TRP TRP A . n A 1 54 ASN 54 54 54 ASN ASN A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 THR 58 58 58 THR THR A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 TYR 60 60 60 TYR TYR A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 ASP 62 62 62 ASP ASP A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 ARG 67 67 67 ARG ARG A . n A 1 68 PHE 68 68 68 PHE PHE A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 ILE 70 70 70 ILE ILE A . n A 1 71 TYR 71 71 71 TYR TYR A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 ASP 73 73 73 ASP ASP A . n A 1 74 ASN 74 74 74 ASN ASN A . n A 1 75 TYR 75 75 75 TYR TYR A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 ASN 77 77 77 ASN ASN A . n A 1 78 THR 78 78 78 THR THR A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 TYR 80 80 80 TYR TYR A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 GLN 82 82 82 GLN GLN A . n A 1 83 MET 83 83 83 MET MET A . n A 1 84 ASN 84 84 84 ASN ASN A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 LYS 87 87 87 LYS LYS A . n A 1 88 PRO 88 88 88 PRO PRO A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 TYR 94 94 94 TYR TYR A . n A 1 95 TYR 95 95 95 TYR TYR A . n A 1 96 CYS 96 96 96 CYS CYS A . n A 1 97 ASN 97 97 97 ASN ASN A . n A 1 98 ALA 98 98 98 ALA ALA A . n A 1 99 ASP 99 99 99 ASP ASP A . n A 1 100 ASP 100 100 100 ASP ASP A . n A 1 101 LEU 101 101 101 LEU LEU A . n A 1 102 MET 102 102 102 MET MET A . n A 1 103 ILE 103 103 103 ILE ILE A . n A 1 104 ASP 104 104 104 ASP ASP A . n A 1 105 ARG 105 105 105 ARG ARG A . n A 1 106 ASP 106 106 106 ASP ASP A . n A 1 107 TYR 107 107 107 TYR TYR A . n A 1 108 TRP 108 108 108 TRP TRP A . n A 1 109 GLY 109 109 109 GLY GLY A . n A 1 110 GLN 110 110 110 GLN GLN A . n A 1 111 GLY 111 111 111 GLY GLY A . n A 1 112 THR 112 112 112 THR THR A . n A 1 113 GLN 113 113 113 GLN GLN A . n A 1 114 VAL 114 114 114 VAL VAL A . n A 1 115 THR 115 115 115 THR THR A . n A 1 116 VAL 116 116 116 VAL VAL A . n A 1 117 SER 117 117 117 SER SER A . n A 1 118 SER 118 118 ? ? ? A . n A 1 119 GLY 119 119 ? ? ? A . n A 1 120 SER 120 120 ? ? ? A . n A 1 121 GLU 121 121 ? ? ? A . n A 1 122 GLN 122 122 ? ? ? A . n A 1 123 LYS 123 123 ? ? ? A . n A 1 124 LEU 124 124 ? ? ? A . n A 1 125 ILE 125 125 ? ? ? A . n A 1 126 SER 126 126 ? ? ? A . n A 1 127 GLU 127 127 ? ? ? A . n A 1 128 GLU 128 128 ? ? ? A . n A 1 129 ASP 129 129 ? ? ? A . n A 1 130 LEU 130 130 ? ? ? A . n A 1 131 ASN 131 131 ? ? ? A . n A 1 132 HIS 132 132 ? ? ? A . n A 1 133 HIS 133 133 ? ? ? A . n A 1 134 HIS 134 134 ? ? ? A . n A 1 135 HIS 135 135 ? ? ? A . n A 1 136 HIS 136 136 ? ? ? A . n A 1 137 HIS 137 137 ? ? ? A . n B 1 1 GLN 1 1 ? ? ? B . n B 1 2 VAL 2 2 2 VAL VAL B . n B 1 3 LYS 3 3 3 LYS LYS B . n B 1 4 LEU 4 4 4 LEU LEU B . n B 1 5 GLU 5 5 5 GLU GLU B . n B 1 6 GLU 6 6 6 GLU GLU B . n B 1 7 SER 7 7 7 SER SER B . n B 1 8 GLY 8 8 8 GLY GLY B . n B 1 9 GLY 9 9 9 GLY GLY B . n B 1 10 GLY 10 10 10 GLY GLY B . n B 1 11 LEU 11 11 11 LEU LEU B . n B 1 12 VAL 12 12 12 VAL VAL B . n B 1 13 GLN 13 13 13 GLN GLN B . n B 1 14 ALA 14 14 14 ALA ALA B . n B 1 15 GLY 15 15 15 GLY GLY B . n B 1 16 GLY 16 16 16 GLY GLY B . n B 1 17 SER 17 17 17 SER SER B . n B 1 18 LEU 18 18 18 LEU LEU B . n B 1 19 ARG 19 19 19 ARG ARG B . n B 1 20 LEU 20 20 20 LEU LEU B . n B 1 21 SER 21 21 21 SER SER B . n B 1 22 CYS 22 22 22 CYS CYS B . n B 1 23 ALA 23 23 23 ALA ALA B . n B 1 24 ALA 24 24 24 ALA ALA B . n B 1 25 SER 25 25 25 SER SER B . n B 1 26 GLY 26 26 26 GLY GLY B . n B 1 27 SER 27 27 27 SER SER B . n B 1 28 THR 28 28 ? ? ? B . n B 1 29 PHE 29 29 ? ? ? B . n B 1 30 SER 30 30 30 SER SER B . n B 1 31 ILE 31 31 31 ILE ILE B . n B 1 32 TYR 32 32 32 TYR TYR B . n B 1 33 THR 33 33 33 THR THR B . n B 1 34 MET 34 34 34 MET MET B . n B 1 35 GLY 35 35 35 GLY GLY B . n B 1 36 TRP 36 36 36 TRP TRP B . n B 1 37 PHE 37 37 37 PHE PHE B . n B 1 38 ARG 38 38 38 ARG ARG B . n B 1 39 GLN 39 39 39 GLN GLN B . n B 1 40 ALA 40 40 40 ALA ALA B . n B 1 41 PRO 41 41 41 PRO PRO B . n B 1 42 GLY 42 42 42 GLY GLY B . n B 1 43 LYS 43 43 43 LYS LYS B . n B 1 44 GLU 44 44 44 GLU GLU B . n B 1 45 ARG 45 45 45 ARG ARG B . n B 1 46 GLU 46 46 46 GLU GLU B . n B 1 47 PHE 47 47 47 PHE PHE B . n B 1 48 VAL 48 48 48 VAL VAL B . n B 1 49 ALA 49 49 49 ALA ALA B . n B 1 50 ASP 50 50 50 ASP ASP B . n B 1 51 ILE 51 51 51 ILE ILE B . n B 1 52 SER 52 52 52 SER SER B . n B 1 53 TRP 53 53 53 TRP TRP B . n B 1 54 ASN 54 54 54 ASN ASN B . n B 1 55 GLY 55 55 55 GLY GLY B . n B 1 56 GLY 56 56 56 GLY GLY B . n B 1 57 SER 57 57 57 SER SER B . n B 1 58 THR 58 58 58 THR THR B . n B 1 59 TYR 59 59 59 TYR TYR B . n B 1 60 TYR 60 60 60 TYR TYR B . n B 1 61 ALA 61 61 61 ALA ALA B . n B 1 62 ASP 62 62 62 ASP ASP B . n B 1 63 SER 63 63 63 SER SER B . n B 1 64 VAL 64 64 64 VAL VAL B . n B 1 65 LYS 65 65 65 LYS LYS B . n B 1 66 GLY 66 66 66 GLY GLY B . n B 1 67 ARG 67 67 67 ARG ARG B . n B 1 68 PHE 68 68 68 PHE PHE B . n B 1 69 THR 69 69 69 THR THR B . n B 1 70 ILE 70 70 70 ILE ILE B . n B 1 71 TYR 71 71 71 TYR TYR B . n B 1 72 ARG 72 72 72 ARG ARG B . n B 1 73 ASP 73 73 73 ASP ASP B . n B 1 74 ASN 74 74 74 ASN ASN B . n B 1 75 TYR 75 75 75 TYR TYR B . n B 1 76 LYS 76 76 ? ? ? B . n B 1 77 ASN 77 77 ? ? ? B . n B 1 78 THR 78 78 78 THR THR B . n B 1 79 VAL 79 79 79 VAL VAL B . n B 1 80 TYR 80 80 80 TYR TYR B . n B 1 81 LEU 81 81 81 LEU LEU B . n B 1 82 GLN 82 82 82 GLN GLN B . n B 1 83 MET 83 83 83 MET MET B . n B 1 84 ASN 84 84 84 ASN ASN B . n B 1 85 SER 85 85 85 SER SER B . n B 1 86 LEU 86 86 86 LEU LEU B . n B 1 87 LYS 87 87 87 LYS LYS B . n B 1 88 PRO 88 88 88 PRO PRO B . n B 1 89 GLU 89 89 89 GLU GLU B . n B 1 90 ASP 90 90 90 ASP ASP B . n B 1 91 THR 91 91 91 THR THR B . n B 1 92 ALA 92 92 92 ALA ALA B . n B 1 93 VAL 93 93 93 VAL VAL B . n B 1 94 TYR 94 94 94 TYR TYR B . n B 1 95 TYR 95 95 95 TYR TYR B . n B 1 96 CYS 96 96 96 CYS CYS B . n B 1 97 ASN 97 97 97 ASN ASN B . n B 1 98 ALA 98 98 98 ALA ALA B . n B 1 99 ASP 99 99 99 ASP ASP B . n B 1 100 ASP 100 100 100 ASP ASP B . n B 1 101 LEU 101 101 101 LEU LEU B . n B 1 102 MET 102 102 102 MET MET B . n B 1 103 ILE 103 103 103 ILE ILE B . n B 1 104 ASP 104 104 104 ASP ASP B . n B 1 105 ARG 105 105 105 ARG ARG B . n B 1 106 ASP 106 106 106 ASP ASP B . n B 1 107 TYR 107 107 107 TYR TYR B . n B 1 108 TRP 108 108 108 TRP TRP B . n B 1 109 GLY 109 109 109 GLY GLY B . n B 1 110 GLN 110 110 110 GLN GLN B . n B 1 111 GLY 111 111 111 GLY GLY B . n B 1 112 THR 112 112 112 THR THR B . n B 1 113 GLN 113 113 113 GLN GLN B . n B 1 114 VAL 114 114 114 VAL VAL B . n B 1 115 THR 115 115 115 THR THR B . n B 1 116 VAL 116 116 116 VAL VAL B . n B 1 117 SER 117 117 117 SER SER B . n B 1 118 SER 118 118 118 SER SER B . n B 1 119 GLY 119 119 ? ? ? B . n B 1 120 SER 120 120 ? ? ? B . n B 1 121 GLU 121 121 ? ? ? B . n B 1 122 GLN 122 122 ? ? ? B . n B 1 123 LYS 123 123 ? ? ? B . n B 1 124 LEU 124 124 ? ? ? B . n B 1 125 ILE 125 125 ? ? ? B . n B 1 126 SER 126 126 ? ? ? B . n B 1 127 GLU 127 127 ? ? ? B . n B 1 128 GLU 128 128 ? ? ? B . n B 1 129 ASP 129 129 ? ? ? B . n B 1 130 LEU 130 130 ? ? ? B . n B 1 131 ASN 131 131 ? ? ? B . n B 1 132 HIS 132 132 ? ? ? B . n B 1 133 HIS 133 133 ? ? ? B . n B 1 134 HIS 134 134 ? ? ? B . n B 1 135 HIS 135 135 ? ? ? B . n B 1 136 HIS 136 136 ? ? ? B . n B 1 137 HIS 137 137 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EPE 1 201 1 EPE EPE B . D 3 HOH 1 201 105 HOH HOH A . D 3 HOH 2 202 91 HOH HOH A . D 3 HOH 3 203 111 HOH HOH A . D 3 HOH 4 204 51 HOH HOH A . D 3 HOH 5 205 84 HOH HOH A . D 3 HOH 6 206 23 HOH HOH A . D 3 HOH 7 207 44 HOH HOH A . D 3 HOH 8 208 53 HOH HOH A . D 3 HOH 9 209 96 HOH HOH A . D 3 HOH 10 210 38 HOH HOH A . D 3 HOH 11 211 61 HOH HOH A . D 3 HOH 12 212 27 HOH HOH A . D 3 HOH 13 213 28 HOH HOH A . D 3 HOH 14 214 47 HOH HOH A . D 3 HOH 15 215 40 HOH HOH A . D 3 HOH 16 216 34 HOH HOH A . D 3 HOH 17 217 17 HOH HOH A . D 3 HOH 18 218 45 HOH HOH A . D 3 HOH 19 219 1 HOH HOH A . D 3 HOH 20 220 6 HOH HOH A . D 3 HOH 21 221 9 HOH HOH A . D 3 HOH 22 222 175 HOH HOH A . D 3 HOH 23 223 104 HOH HOH A . D 3 HOH 24 224 64 HOH HOH A . D 3 HOH 25 225 57 HOH HOH A . D 3 HOH 26 226 149 HOH HOH A . D 3 HOH 27 227 103 HOH HOH A . D 3 HOH 28 228 79 HOH HOH A . D 3 HOH 29 229 98 HOH HOH A . D 3 HOH 30 230 19 HOH HOH A . D 3 HOH 31 231 114 HOH HOH A . D 3 HOH 32 232 2 HOH HOH A . D 3 HOH 33 233 5 HOH HOH A . D 3 HOH 34 234 119 HOH HOH A . D 3 HOH 35 235 3 HOH HOH A . D 3 HOH 36 236 113 HOH HOH A . D 3 HOH 37 237 59 HOH HOH A . D 3 HOH 38 238 10 HOH HOH A . D 3 HOH 39 239 154 HOH HOH A . D 3 HOH 40 240 26 HOH HOH A . D 3 HOH 41 241 37 HOH HOH A . D 3 HOH 42 242 170 HOH HOH A . D 3 HOH 43 243 135 HOH HOH A . D 3 HOH 44 244 39 HOH HOH A . D 3 HOH 45 245 72 HOH HOH A . D 3 HOH 46 246 165 HOH HOH A . D 3 HOH 47 247 107 HOH HOH A . D 3 HOH 48 248 148 HOH HOH A . D 3 HOH 49 249 85 HOH HOH A . D 3 HOH 50 250 12 HOH HOH A . D 3 HOH 51 251 55 HOH HOH A . D 3 HOH 52 252 68 HOH HOH A . D 3 HOH 53 253 169 HOH HOH A . D 3 HOH 54 254 117 HOH HOH A . D 3 HOH 55 255 29 HOH HOH A . D 3 HOH 56 256 46 HOH HOH A . D 3 HOH 57 257 56 HOH HOH A . D 3 HOH 58 258 16 HOH HOH A . D 3 HOH 59 259 20 HOH HOH A . D 3 HOH 60 260 118 HOH HOH A . D 3 HOH 61 261 32 HOH HOH A . D 3 HOH 62 262 67 HOH HOH A . D 3 HOH 63 263 125 HOH HOH A . D 3 HOH 64 264 50 HOH HOH A . D 3 HOH 65 265 35 HOH HOH A . D 3 HOH 66 266 52 HOH HOH A . D 3 HOH 67 267 180 HOH HOH A . D 3 HOH 68 268 7 HOH HOH A . D 3 HOH 69 269 115 HOH HOH A . D 3 HOH 70 270 134 HOH HOH A . D 3 HOH 71 271 161 HOH HOH A . D 3 HOH 72 272 123 HOH HOH A . D 3 HOH 73 273 77 HOH HOH A . D 3 HOH 74 274 130 HOH HOH A . D 3 HOH 75 275 155 HOH HOH A . D 3 HOH 76 276 65 HOH HOH A . D 3 HOH 77 277 159 HOH HOH A . D 3 HOH 78 278 76 HOH HOH A . D 3 HOH 79 279 81 HOH HOH A . D 3 HOH 80 280 25 HOH HOH A . D 3 HOH 81 281 156 HOH HOH A . D 3 HOH 82 282 128 HOH HOH A . D 3 HOH 83 283 108 HOH HOH A . D 3 HOH 84 284 88 HOH HOH A . D 3 HOH 85 285 89 HOH HOH A . D 3 HOH 86 286 181 HOH HOH A . D 3 HOH 87 287 70 HOH HOH A . D 3 HOH 88 288 62 HOH HOH A . E 3 HOH 1 301 13 HOH HOH B . E 3 HOH 2 302 174 HOH HOH B . E 3 HOH 3 303 112 HOH HOH B . E 3 HOH 4 304 75 HOH HOH B . E 3 HOH 5 305 133 HOH HOH B . E 3 HOH 6 306 24 HOH HOH B . E 3 HOH 7 307 90 HOH HOH B . E 3 HOH 8 308 86 HOH HOH B . E 3 HOH 9 309 80 HOH HOH B . E 3 HOH 10 310 87 HOH HOH B . E 3 HOH 11 311 41 HOH HOH B . E 3 HOH 12 312 138 HOH HOH B . E 3 HOH 13 313 172 HOH HOH B . E 3 HOH 14 314 21 HOH HOH B . E 3 HOH 15 315 82 HOH HOH B . E 3 HOH 16 316 106 HOH HOH B . E 3 HOH 17 317 124 HOH HOH B . E 3 HOH 18 318 4 HOH HOH B . E 3 HOH 19 319 11 HOH HOH B . E 3 HOH 20 320 54 HOH HOH B . E 3 HOH 21 321 78 HOH HOH B . E 3 HOH 22 322 15 HOH HOH B . E 3 HOH 23 323 151 HOH HOH B . E 3 HOH 24 324 163 HOH HOH B . E 3 HOH 25 325 144 HOH HOH B . E 3 HOH 26 326 36 HOH HOH B . E 3 HOH 27 327 145 HOH HOH B . E 3 HOH 28 328 49 HOH HOH B . E 3 HOH 29 329 74 HOH HOH B . E 3 HOH 30 330 60 HOH HOH B . E 3 HOH 31 331 42 HOH HOH B . E 3 HOH 32 332 22 HOH HOH B . E 3 HOH 33 333 18 HOH HOH B . E 3 HOH 34 334 129 HOH HOH B . E 3 HOH 35 335 58 HOH HOH B . E 3 HOH 36 336 95 HOH HOH B . E 3 HOH 37 337 131 HOH HOH B . E 3 HOH 38 338 14 HOH HOH B . E 3 HOH 39 339 31 HOH HOH B . E 3 HOH 40 340 109 HOH HOH B . E 3 HOH 41 341 43 HOH HOH B . E 3 HOH 42 342 8 HOH HOH B . E 3 HOH 43 343 102 HOH HOH B . E 3 HOH 44 344 176 HOH HOH B . E 3 HOH 45 345 73 HOH HOH B . E 3 HOH 46 346 94 HOH HOH B . E 3 HOH 47 347 71 HOH HOH B . E 3 HOH 48 348 183 HOH HOH B . E 3 HOH 49 349 110 HOH HOH B . E 3 HOH 50 350 136 HOH HOH B . E 3 HOH 51 351 63 HOH HOH B . E 3 HOH 52 352 139 HOH HOH B . E 3 HOH 53 353 137 HOH HOH B . E 3 HOH 54 354 168 HOH HOH B . E 3 HOH 55 355 93 HOH HOH B . E 3 HOH 56 356 99 HOH HOH B . E 3 HOH 57 357 120 HOH HOH B . E 3 HOH 58 358 101 HOH HOH B . E 3 HOH 59 359 166 HOH HOH B . E 3 HOH 60 360 66 HOH HOH B . E 3 HOH 61 361 147 HOH HOH B . E 3 HOH 62 362 48 HOH HOH B . E 3 HOH 63 363 30 HOH HOH B . E 3 HOH 64 364 97 HOH HOH B . E 3 HOH 65 365 121 HOH HOH B . E 3 HOH 66 366 142 HOH HOH B . E 3 HOH 67 367 146 HOH HOH B . E 3 HOH 68 368 122 HOH HOH B . E 3 HOH 69 369 164 HOH HOH B . E 3 HOH 70 370 132 HOH HOH B . E 3 HOH 71 371 153 HOH HOH B . E 3 HOH 72 372 116 HOH HOH B . E 3 HOH 73 373 179 HOH HOH B . E 3 HOH 74 374 150 HOH HOH B . E 3 HOH 75 375 83 HOH HOH B . E 3 HOH 76 376 33 HOH HOH B . E 3 HOH 77 377 100 HOH HOH B . E 3 HOH 78 378 184 HOH HOH B . E 3 HOH 79 379 69 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,D 2 1 B,C,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-07-18 2 'Structure model' 1 1 2018-07-25 3 'Structure model' 1 2 2018-09-12 4 'Structure model' 1 3 2020-01-01 5 'Structure model' 1 4 2023-10-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 4 'Structure model' 'Author supporting evidence' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 3 'Structure model' citation_author 5 4 'Structure model' pdbx_audit_support 6 5 'Structure model' chem_comp_atom 7 5 'Structure model' chem_comp_bond 8 5 'Structure model' database_2 9 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_abbrev' 2 2 'Structure model' '_citation.pdbx_database_id_DOI' 3 2 'Structure model' '_citation.pdbx_database_id_PubMed' 4 2 'Structure model' '_citation.title' 5 3 'Structure model' '_citation.journal_volume' 6 3 'Structure model' '_citation.page_first' 7 3 'Structure model' '_citation.page_last' 8 3 'Structure model' '_citation.title' 9 3 'Structure model' '_citation_author.identifier_ORCID' 10 3 'Structure model' '_citation_author.name' 11 4 'Structure model' '_pdbx_audit_support.funding_organization' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 19.2105 47.0233 10.2189 0.1927 0.1780 0.1961 -0.0084 -0.0024 0.0072 0.3508 0.1616 0.4180 -0.2266 -0.2628 -0.0857 0.0396 -0.0931 0.0335 0.0261 -0.0480 0.0056 -0.0170 0.2771 0.0001 'X-RAY DIFFRACTION' 2 ? refined 3.4218 53.6276 11.7752 0.2462 0.3896 0.4574 0.1501 0.0510 -0.0032 0.9791 2.9306 3.6788 1.0708 1.4922 1.2432 -0.6203 -0.5954 -0.6799 -0.2999 -0.6506 0.0647 -0.2082 -0.5374 -1.0193 'X-RAY DIFFRACTION' 3 ? refined 13.0960 37.2378 5.1802 0.2105 0.1403 0.1814 0.0117 -0.0112 -0.0230 1.0006 0.2094 0.3046 0.5176 -0.0625 -0.0584 -0.1531 0.1189 0.0712 0.1968 0.1267 0.1034 0.1687 -0.0970 -0.0218 'X-RAY DIFFRACTION' 4 ? refined 14.8625 43.8006 0.4282 0.1860 0.1920 0.1963 0.0013 -0.0418 0.0390 0.1015 0.6187 0.6778 0.2947 0.0303 0.1119 0.3090 0.2180 -0.4792 -0.4541 0.1063 0.2555 0.4919 0.2831 0.0709 'X-RAY DIFFRACTION' 5 ? refined 24.9038 42.9862 6.6464 0.2254 0.3047 0.1920 0.0327 -0.0403 0.0286 0.4979 1.2038 0.1138 -0.5617 0.1889 -0.1266 0.0007 -0.1067 -0.3892 0.1896 0.1838 0.1509 -0.0675 0.4488 0.0015 'X-RAY DIFFRACTION' 6 ? refined 13.7536 47.9876 10.9779 0.2030 0.1408 0.1745 0.0064 0.0074 0.0031 0.4667 0.7327 0.5346 -0.2481 -0.2846 0.1576 0.0563 -0.0320 -0.0212 0.1080 0.0759 0.2886 -0.1029 -0.0204 -0.0003 'X-RAY DIFFRACTION' 7 ? refined -5.9002 19.9354 10.2955 0.2811 0.2015 0.1853 -0.0546 -0.0085 0.0298 0.9195 0.3808 -0.0148 -0.1643 0.0426 0.0799 -0.0552 0.0986 -0.0701 -0.2655 0.3542 -0.0042 0.1381 -0.0718 0.1931 'X-RAY DIFFRACTION' 8 ? refined -3.4227 30.5474 13.8293 0.2624 0.2004 0.1738 0.0081 -0.0068 -0.0088 0.8572 1.3191 0.6204 -0.4711 -0.3791 0.6437 0.0553 -0.3510 0.2218 0.4361 0.0961 -0.3559 -0.0372 -0.1653 0.0715 'X-RAY DIFFRACTION' 9 ? refined 11.3924 20.2899 12.4567 0.3329 0.2808 0.5661 0.0455 -0.0024 0.1271 2.0382 0.3759 0.1108 -0.2355 0.3948 0.0488 -0.3801 -0.7957 0.3492 -0.6226 -0.3291 -0.2069 0.0608 0.3048 -0.1123 'X-RAY DIFFRACTION' 10 ? refined 1.8584 34.6216 5.1251 0.2109 0.1206 0.1630 0.0142 0.0055 0.0306 0.8928 0.3751 0.5937 0.6005 -0.2401 -0.2612 -0.1821 0.0785 0.2490 0.1758 0.2258 -0.3207 -0.1218 -0.0875 0.0029 'X-RAY DIFFRACTION' 11 ? refined -2.9942 29.7212 2.1119 0.2952 0.1868 0.1501 0.0017 -0.0105 0.0410 0.3964 0.5031 1.0042 0.4419 0.3653 0.3459 -0.0598 0.2596 0.3799 -0.0345 -0.1177 0.1054 -0.0006 -0.6683 -0.0493 'X-RAY DIFFRACTION' 12 ? refined -9.8314 31.7681 8.6216 0.2621 0.3265 0.2504 0.0498 0.0026 0.0389 0.3071 0.0789 0.2121 -0.1962 0.1299 0.0248 -0.1053 -0.2214 0.1343 0.3080 0.2120 0.4165 0.0518 -0.5693 0.0586 'X-RAY DIFFRACTION' 13 ? refined 1.1229 23.6556 8.9961 0.2922 0.1489 0.1732 -0.0069 -0.0312 0.0120 1.0444 1.2198 0.4362 0.1574 -0.0319 -0.1889 0.0054 -0.0579 0.0168 -0.0415 0.1513 -0.3770 -0.0058 -0.2072 0.1411 'X-RAY DIFFRACTION' 14 ? refined 1.9418 35.4922 21.1425 0.3322 0.2628 0.3209 0.0041 0.0110 -0.0198 1.5308 0.3836 0.2182 -0.7422 -0.5483 0.3058 0.2545 -0.2618 0.6753 -0.0738 -0.2722 -0.3244 -0.0709 -0.2353 0.0350 'X-RAY DIFFRACTION' 15 ? refined -1.0399 13.5166 7.8286 0.3382 0.1457 0.2861 -0.0547 -0.0919 -0.0054 0.9479 0.0492 0.1590 0.1124 -0.1636 -0.0364 0.4123 -0.3853 -0.7400 0.0241 -0.3058 -0.0664 0.0857 0.0832 0.1151 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 2 through 39 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 40 through 45 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 46 through 60 ) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 61 through 73 ) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 74 through 83 ) ; 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 84 through 117 ) ; 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 2 through 17 ) ; 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 18 through 39 ) ; 'X-RAY DIFFRACTION' 9 9 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 40 through 45 ) ; 'X-RAY DIFFRACTION' 10 10 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 46 through 64 ) ; 'X-RAY DIFFRACTION' 11 11 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 65 through 72 ) ; 'X-RAY DIFFRACTION' 12 12 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 73 through 83 ) ; 'X-RAY DIFFRACTION' 13 13 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 84 through 100 ) ; 'X-RAY DIFFRACTION' 14 14 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 101 through 111 ) ; 'X-RAY DIFFRACTION' 15 15 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 112 through 118 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.12_2829: ???)' 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.24 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HE22 A GLN 39 ? ? O A LYS 43 ? ? 1.57 2 1 HZ1 A LYS 87 ? ? O A HOH 201 ? ? 1.59 3 1 O B HOH 344 ? ? O B HOH 359 ? ? 2.14 4 1 NE2 A GLN 39 ? ? O A LYS 43 ? ? 2.16 5 1 O A HOH 284 ? ? O A HOH 288 ? ? 2.18 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 229 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 247 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 4_555 _pdbx_validate_symm_contact.dist 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 29 ? ? -172.55 85.46 2 1 SER A 30 ? ? -84.35 -158.21 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 3 ? CG ? A LYS 3 CG 2 1 Y 1 A LYS 3 ? CD ? A LYS 3 CD 3 1 Y 1 A LYS 3 ? CE ? A LYS 3 CE 4 1 Y 1 A LYS 3 ? NZ ? A LYS 3 NZ 5 1 Y 1 A THR 28 ? OG1 ? A THR 28 OG1 6 1 Y 1 A THR 28 ? CG2 ? A THR 28 CG2 7 1 Y 1 A PHE 29 ? CG ? A PHE 29 CG 8 1 Y 1 A PHE 29 ? CD1 ? A PHE 29 CD1 9 1 Y 1 A PHE 29 ? CD2 ? A PHE 29 CD2 10 1 Y 1 A PHE 29 ? CE1 ? A PHE 29 CE1 11 1 Y 1 A PHE 29 ? CE2 ? A PHE 29 CE2 12 1 Y 1 A PHE 29 ? CZ ? A PHE 29 CZ 13 1 Y 1 A ARG 105 ? CG ? A ARG 105 CG 14 1 Y 1 A ARG 105 ? CD ? A ARG 105 CD 15 1 Y 1 A ARG 105 ? NE ? A ARG 105 NE 16 1 Y 1 A ARG 105 ? CZ ? A ARG 105 CZ 17 1 Y 1 A ARG 105 ? NH1 ? A ARG 105 NH1 18 1 Y 1 A ARG 105 ? NH2 ? A ARG 105 NH2 19 1 Y 1 B LYS 3 ? CG ? B LYS 3 CG 20 1 Y 1 B LYS 3 ? CD ? B LYS 3 CD 21 1 Y 1 B LYS 3 ? CE ? B LYS 3 CE 22 1 Y 1 B LYS 3 ? NZ ? B LYS 3 NZ 23 1 Y 1 B GLU 5 ? CG ? B GLU 5 CG 24 1 Y 1 B GLU 5 ? CD ? B GLU 5 CD 25 1 Y 1 B GLU 5 ? OE1 ? B GLU 5 OE1 26 1 Y 1 B GLU 5 ? OE2 ? B GLU 5 OE2 27 1 Y 1 B SER 27 ? OG ? B SER 27 OG # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 1 ? A GLN 1 2 1 Y 1 A SER 27 ? A SER 27 3 1 Y 1 A SER 118 ? A SER 118 4 1 Y 1 A GLY 119 ? A GLY 119 5 1 Y 1 A SER 120 ? A SER 120 6 1 Y 1 A GLU 121 ? A GLU 121 7 1 Y 1 A GLN 122 ? A GLN 122 8 1 Y 1 A LYS 123 ? A LYS 123 9 1 Y 1 A LEU 124 ? A LEU 124 10 1 Y 1 A ILE 125 ? A ILE 125 11 1 Y 1 A SER 126 ? A SER 126 12 1 Y 1 A GLU 127 ? A GLU 127 13 1 Y 1 A GLU 128 ? A GLU 128 14 1 Y 1 A ASP 129 ? A ASP 129 15 1 Y 1 A LEU 130 ? A LEU 130 16 1 Y 1 A ASN 131 ? A ASN 131 17 1 Y 1 A HIS 132 ? A HIS 132 18 1 Y 1 A HIS 133 ? A HIS 133 19 1 Y 1 A HIS 134 ? A HIS 134 20 1 Y 1 A HIS 135 ? A HIS 135 21 1 Y 1 A HIS 136 ? A HIS 136 22 1 Y 1 A HIS 137 ? A HIS 137 23 1 Y 1 B GLN 1 ? B GLN 1 24 1 Y 1 B THR 28 ? B THR 28 25 1 Y 1 B PHE 29 ? B PHE 29 26 1 Y 1 B LYS 76 ? B LYS 76 27 1 Y 1 B ASN 77 ? B ASN 77 28 1 Y 1 B GLY 119 ? B GLY 119 29 1 Y 1 B SER 120 ? B SER 120 30 1 Y 1 B GLU 121 ? B GLU 121 31 1 Y 1 B GLN 122 ? B GLN 122 32 1 Y 1 B LYS 123 ? B LYS 123 33 1 Y 1 B LEU 124 ? B LEU 124 34 1 Y 1 B ILE 125 ? B ILE 125 35 1 Y 1 B SER 126 ? B SER 126 36 1 Y 1 B GLU 127 ? B GLU 127 37 1 Y 1 B GLU 128 ? B GLU 128 38 1 Y 1 B ASP 129 ? B ASP 129 39 1 Y 1 B LEU 130 ? B LEU 130 40 1 Y 1 B ASN 131 ? B ASN 131 41 1 Y 1 B HIS 132 ? B HIS 132 42 1 Y 1 B HIS 133 ? B HIS 133 43 1 Y 1 B HIS 134 ? B HIS 134 44 1 Y 1 B HIS 135 ? B HIS 135 45 1 Y 1 B HIS 136 ? B HIS 136 46 1 Y 1 B HIS 137 ? B HIS 137 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EPE N1 N N N 88 EPE C2 C N N 89 EPE C3 C N N 90 EPE N4 N N N 91 EPE C5 C N N 92 EPE C6 C N N 93 EPE C7 C N N 94 EPE C8 C N N 95 EPE O8 O N N 96 EPE C9 C N N 97 EPE C10 C N N 98 EPE S S N N 99 EPE O1S O N N 100 EPE O2S O N N 101 EPE O3S O N N 102 EPE H21 H N N 103 EPE H22 H N N 104 EPE H31 H N N 105 EPE H32 H N N 106 EPE H51 H N N 107 EPE H52 H N N 108 EPE H61 H N N 109 EPE H62 H N N 110 EPE H71 H N N 111 EPE H72 H N N 112 EPE H81 H N N 113 EPE H82 H N N 114 EPE HO8 H N N 115 EPE H91 H N N 116 EPE H92 H N N 117 EPE H101 H N N 118 EPE H102 H N N 119 EPE HOS3 H N N 120 GLN N N N N 121 GLN CA C N S 122 GLN C C N N 123 GLN O O N N 124 GLN CB C N N 125 GLN CG C N N 126 GLN CD C N N 127 GLN OE1 O N N 128 GLN NE2 N N N 129 GLN OXT O N N 130 GLN H H N N 131 GLN H2 H N N 132 GLN HA H N N 133 GLN HB2 H N N 134 GLN HB3 H N N 135 GLN HG2 H N N 136 GLN HG3 H N N 137 GLN HE21 H N N 138 GLN HE22 H N N 139 GLN HXT H N N 140 GLU N N N N 141 GLU CA C N S 142 GLU C C N N 143 GLU O O N N 144 GLU CB C N N 145 GLU CG C N N 146 GLU CD C N N 147 GLU OE1 O N N 148 GLU OE2 O N N 149 GLU OXT O N N 150 GLU H H N N 151 GLU H2 H N N 152 GLU HA H N N 153 GLU HB2 H N N 154 GLU HB3 H N N 155 GLU HG2 H N N 156 GLU HG3 H N N 157 GLU HE2 H N N 158 GLU HXT H N N 159 GLY N N N N 160 GLY CA C N N 161 GLY C C N N 162 GLY O O N N 163 GLY OXT O N N 164 GLY H H N N 165 GLY H2 H N N 166 GLY HA2 H N N 167 GLY HA3 H N N 168 GLY HXT H N N 169 HIS N N N N 170 HIS CA C N S 171 HIS C C N N 172 HIS O O N N 173 HIS CB C N N 174 HIS CG C Y N 175 HIS ND1 N Y N 176 HIS CD2 C Y N 177 HIS CE1 C Y N 178 HIS NE2 N Y N 179 HIS OXT O N N 180 HIS H H N N 181 HIS H2 H N N 182 HIS HA H N N 183 HIS HB2 H N N 184 HIS HB3 H N N 185 HIS HD1 H N N 186 HIS HD2 H N N 187 HIS HE1 H N N 188 HIS HE2 H N N 189 HIS HXT H N N 190 HOH O O N N 191 HOH H1 H N N 192 HOH H2 H N N 193 ILE N N N N 194 ILE CA C N S 195 ILE C C N N 196 ILE O O N N 197 ILE CB C N S 198 ILE CG1 C N N 199 ILE CG2 C N N 200 ILE CD1 C N N 201 ILE OXT O N N 202 ILE H H N N 203 ILE H2 H N N 204 ILE HA H N N 205 ILE HB H N N 206 ILE HG12 H N N 207 ILE HG13 H N N 208 ILE HG21 H N N 209 ILE HG22 H N N 210 ILE HG23 H N N 211 ILE HD11 H N N 212 ILE HD12 H N N 213 ILE HD13 H N N 214 ILE HXT H N N 215 LEU N N N N 216 LEU CA C N S 217 LEU C C N N 218 LEU O O N N 219 LEU CB C N N 220 LEU CG C N N 221 LEU CD1 C N N 222 LEU CD2 C N N 223 LEU OXT O N N 224 LEU H H N N 225 LEU H2 H N N 226 LEU HA H N N 227 LEU HB2 H N N 228 LEU HB3 H N N 229 LEU HG H N N 230 LEU HD11 H N N 231 LEU HD12 H N N 232 LEU HD13 H N N 233 LEU HD21 H N N 234 LEU HD22 H N N 235 LEU HD23 H N N 236 LEU HXT H N N 237 LYS N N N N 238 LYS CA C N S 239 LYS C C N N 240 LYS O O N N 241 LYS CB C N N 242 LYS CG C N N 243 LYS CD C N N 244 LYS CE C N N 245 LYS NZ N N N 246 LYS OXT O N N 247 LYS H H N N 248 LYS H2 H N N 249 LYS HA H N N 250 LYS HB2 H N N 251 LYS HB3 H N N 252 LYS HG2 H N N 253 LYS HG3 H N N 254 LYS HD2 H N N 255 LYS HD3 H N N 256 LYS HE2 H N N 257 LYS HE3 H N N 258 LYS HZ1 H N N 259 LYS HZ2 H N N 260 LYS HZ3 H N N 261 LYS HXT H N N 262 MET N N N N 263 MET CA C N S 264 MET C C N N 265 MET O O N N 266 MET CB C N N 267 MET CG C N N 268 MET SD S N N 269 MET CE C N N 270 MET OXT O N N 271 MET H H N N 272 MET H2 H N N 273 MET HA H N N 274 MET HB2 H N N 275 MET HB3 H N N 276 MET HG2 H N N 277 MET HG3 H N N 278 MET HE1 H N N 279 MET HE2 H N N 280 MET HE3 H N N 281 MET HXT H N N 282 PHE N N N N 283 PHE CA C N S 284 PHE C C N N 285 PHE O O N N 286 PHE CB C N N 287 PHE CG C Y N 288 PHE CD1 C Y N 289 PHE CD2 C Y N 290 PHE CE1 C Y N 291 PHE CE2 C Y N 292 PHE CZ C Y N 293 PHE OXT O N N 294 PHE H H N N 295 PHE H2 H N N 296 PHE HA H N N 297 PHE HB2 H N N 298 PHE HB3 H N N 299 PHE HD1 H N N 300 PHE HD2 H N N 301 PHE HE1 H N N 302 PHE HE2 H N N 303 PHE HZ H N N 304 PHE HXT H N N 305 PRO N N N N 306 PRO CA C N S 307 PRO C C N N 308 PRO O O N N 309 PRO CB C N N 310 PRO CG C N N 311 PRO CD C N N 312 PRO OXT O N N 313 PRO H H N N 314 PRO HA H N N 315 PRO HB2 H N N 316 PRO HB3 H N N 317 PRO HG2 H N N 318 PRO HG3 H N N 319 PRO HD2 H N N 320 PRO HD3 H N N 321 PRO HXT H N N 322 SER N N N N 323 SER CA C N S 324 SER C C N N 325 SER O O N N 326 SER CB C N N 327 SER OG O N N 328 SER OXT O N N 329 SER H H N N 330 SER H2 H N N 331 SER HA H N N 332 SER HB2 H N N 333 SER HB3 H N N 334 SER HG H N N 335 SER HXT H N N 336 THR N N N N 337 THR CA C N S 338 THR C C N N 339 THR O O N N 340 THR CB C N R 341 THR OG1 O N N 342 THR CG2 C N N 343 THR OXT O N N 344 THR H H N N 345 THR H2 H N N 346 THR HA H N N 347 THR HB H N N 348 THR HG1 H N N 349 THR HG21 H N N 350 THR HG22 H N N 351 THR HG23 H N N 352 THR HXT H N N 353 TRP N N N N 354 TRP CA C N S 355 TRP C C N N 356 TRP O O N N 357 TRP CB C N N 358 TRP CG C Y N 359 TRP CD1 C Y N 360 TRP CD2 C Y N 361 TRP NE1 N Y N 362 TRP CE2 C Y N 363 TRP CE3 C Y N 364 TRP CZ2 C Y N 365 TRP CZ3 C Y N 366 TRP CH2 C Y N 367 TRP OXT O N N 368 TRP H H N N 369 TRP H2 H N N 370 TRP HA H N N 371 TRP HB2 H N N 372 TRP HB3 H N N 373 TRP HD1 H N N 374 TRP HE1 H N N 375 TRP HE3 H N N 376 TRP HZ2 H N N 377 TRP HZ3 H N N 378 TRP HH2 H N N 379 TRP HXT H N N 380 TYR N N N N 381 TYR CA C N S 382 TYR C C N N 383 TYR O O N N 384 TYR CB C N N 385 TYR CG C Y N 386 TYR CD1 C Y N 387 TYR CD2 C Y N 388 TYR CE1 C Y N 389 TYR CE2 C Y N 390 TYR CZ C Y N 391 TYR OH O N N 392 TYR OXT O N N 393 TYR H H N N 394 TYR H2 H N N 395 TYR HA H N N 396 TYR HB2 H N N 397 TYR HB3 H N N 398 TYR HD1 H N N 399 TYR HD2 H N N 400 TYR HE1 H N N 401 TYR HE2 H N N 402 TYR HH H N N 403 TYR HXT H N N 404 VAL N N N N 405 VAL CA C N S 406 VAL C C N N 407 VAL O O N N 408 VAL CB C N N 409 VAL CG1 C N N 410 VAL CG2 C N N 411 VAL OXT O N N 412 VAL H H N N 413 VAL H2 H N N 414 VAL HA H N N 415 VAL HB H N N 416 VAL HG11 H N N 417 VAL HG12 H N N 418 VAL HG13 H N N 419 VAL HG21 H N N 420 VAL HG22 H N N 421 VAL HG23 H N N 422 VAL HXT H N N 423 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EPE N1 C2 sing N N 83 EPE N1 C6 sing N N 84 EPE N1 C9 sing N N 85 EPE C2 C3 sing N N 86 EPE C2 H21 sing N N 87 EPE C2 H22 sing N N 88 EPE C3 N4 sing N N 89 EPE C3 H31 sing N N 90 EPE C3 H32 sing N N 91 EPE N4 C5 sing N N 92 EPE N4 C7 sing N N 93 EPE C5 C6 sing N N 94 EPE C5 H51 sing N N 95 EPE C5 H52 sing N N 96 EPE C6 H61 sing N N 97 EPE C6 H62 sing N N 98 EPE C7 C8 sing N N 99 EPE C7 H71 sing N N 100 EPE C7 H72 sing N N 101 EPE C8 O8 sing N N 102 EPE C8 H81 sing N N 103 EPE C8 H82 sing N N 104 EPE O8 HO8 sing N N 105 EPE C9 C10 sing N N 106 EPE C9 H91 sing N N 107 EPE C9 H92 sing N N 108 EPE C10 S sing N N 109 EPE C10 H101 sing N N 110 EPE C10 H102 sing N N 111 EPE S O1S doub N N 112 EPE S O2S doub N N 113 EPE S O3S sing N N 114 EPE O3S HOS3 sing N N 115 GLN N CA sing N N 116 GLN N H sing N N 117 GLN N H2 sing N N 118 GLN CA C sing N N 119 GLN CA CB sing N N 120 GLN CA HA sing N N 121 GLN C O doub N N 122 GLN C OXT sing N N 123 GLN CB CG sing N N 124 GLN CB HB2 sing N N 125 GLN CB HB3 sing N N 126 GLN CG CD sing N N 127 GLN CG HG2 sing N N 128 GLN CG HG3 sing N N 129 GLN CD OE1 doub N N 130 GLN CD NE2 sing N N 131 GLN NE2 HE21 sing N N 132 GLN NE2 HE22 sing N N 133 GLN OXT HXT sing N N 134 GLU N CA sing N N 135 GLU N H sing N N 136 GLU N H2 sing N N 137 GLU CA C sing N N 138 GLU CA CB sing N N 139 GLU CA HA sing N N 140 GLU C O doub N N 141 GLU C OXT sing N N 142 GLU CB CG sing N N 143 GLU CB HB2 sing N N 144 GLU CB HB3 sing N N 145 GLU CG CD sing N N 146 GLU CG HG2 sing N N 147 GLU CG HG3 sing N N 148 GLU CD OE1 doub N N 149 GLU CD OE2 sing N N 150 GLU OE2 HE2 sing N N 151 GLU OXT HXT sing N N 152 GLY N CA sing N N 153 GLY N H sing N N 154 GLY N H2 sing N N 155 GLY CA C sing N N 156 GLY CA HA2 sing N N 157 GLY CA HA3 sing N N 158 GLY C O doub N N 159 GLY C OXT sing N N 160 GLY OXT HXT sing N N 161 HIS N CA sing N N 162 HIS N H sing N N 163 HIS N H2 sing N N 164 HIS CA C sing N N 165 HIS CA CB sing N N 166 HIS CA HA sing N N 167 HIS C O doub N N 168 HIS C OXT sing N N 169 HIS CB CG sing N N 170 HIS CB HB2 sing N N 171 HIS CB HB3 sing N N 172 HIS CG ND1 sing Y N 173 HIS CG CD2 doub Y N 174 HIS ND1 CE1 doub Y N 175 HIS ND1 HD1 sing N N 176 HIS CD2 NE2 sing Y N 177 HIS CD2 HD2 sing N N 178 HIS CE1 NE2 sing Y N 179 HIS CE1 HE1 sing N N 180 HIS NE2 HE2 sing N N 181 HIS OXT HXT sing N N 182 HOH O H1 sing N N 183 HOH O H2 sing N N 184 ILE N CA sing N N 185 ILE N H sing N N 186 ILE N H2 sing N N 187 ILE CA C sing N N 188 ILE CA CB sing N N 189 ILE CA HA sing N N 190 ILE C O doub N N 191 ILE C OXT sing N N 192 ILE CB CG1 sing N N 193 ILE CB CG2 sing N N 194 ILE CB HB sing N N 195 ILE CG1 CD1 sing N N 196 ILE CG1 HG12 sing N N 197 ILE CG1 HG13 sing N N 198 ILE CG2 HG21 sing N N 199 ILE CG2 HG22 sing N N 200 ILE CG2 HG23 sing N N 201 ILE CD1 HD11 sing N N 202 ILE CD1 HD12 sing N N 203 ILE CD1 HD13 sing N N 204 ILE OXT HXT sing N N 205 LEU N CA sing N N 206 LEU N H sing N N 207 LEU N H2 sing N N 208 LEU CA C sing N N 209 LEU CA CB sing N N 210 LEU CA HA sing N N 211 LEU C O doub N N 212 LEU C OXT sing N N 213 LEU CB CG sing N N 214 LEU CB HB2 sing N N 215 LEU CB HB3 sing N N 216 LEU CG CD1 sing N N 217 LEU CG CD2 sing N N 218 LEU CG HG sing N N 219 LEU CD1 HD11 sing N N 220 LEU CD1 HD12 sing N N 221 LEU CD1 HD13 sing N N 222 LEU CD2 HD21 sing N N 223 LEU CD2 HD22 sing N N 224 LEU CD2 HD23 sing N N 225 LEU OXT HXT sing N N 226 LYS N CA sing N N 227 LYS N H sing N N 228 LYS N H2 sing N N 229 LYS CA C sing N N 230 LYS CA CB sing N N 231 LYS CA HA sing N N 232 LYS C O doub N N 233 LYS C OXT sing N N 234 LYS CB CG sing N N 235 LYS CB HB2 sing N N 236 LYS CB HB3 sing N N 237 LYS CG CD sing N N 238 LYS CG HG2 sing N N 239 LYS CG HG3 sing N N 240 LYS CD CE sing N N 241 LYS CD HD2 sing N N 242 LYS CD HD3 sing N N 243 LYS CE NZ sing N N 244 LYS CE HE2 sing N N 245 LYS CE HE3 sing N N 246 LYS NZ HZ1 sing N N 247 LYS NZ HZ2 sing N N 248 LYS NZ HZ3 sing N N 249 LYS OXT HXT sing N N 250 MET N CA sing N N 251 MET N H sing N N 252 MET N H2 sing N N 253 MET CA C sing N N 254 MET CA CB sing N N 255 MET CA HA sing N N 256 MET C O doub N N 257 MET C OXT sing N N 258 MET CB CG sing N N 259 MET CB HB2 sing N N 260 MET CB HB3 sing N N 261 MET CG SD sing N N 262 MET CG HG2 sing N N 263 MET CG HG3 sing N N 264 MET SD CE sing N N 265 MET CE HE1 sing N N 266 MET CE HE2 sing N N 267 MET CE HE3 sing N N 268 MET OXT HXT sing N N 269 PHE N CA sing N N 270 PHE N H sing N N 271 PHE N H2 sing N N 272 PHE CA C sing N N 273 PHE CA CB sing N N 274 PHE CA HA sing N N 275 PHE C O doub N N 276 PHE C OXT sing N N 277 PHE CB CG sing N N 278 PHE CB HB2 sing N N 279 PHE CB HB3 sing N N 280 PHE CG CD1 doub Y N 281 PHE CG CD2 sing Y N 282 PHE CD1 CE1 sing Y N 283 PHE CD1 HD1 sing N N 284 PHE CD2 CE2 doub Y N 285 PHE CD2 HD2 sing N N 286 PHE CE1 CZ doub Y N 287 PHE CE1 HE1 sing N N 288 PHE CE2 CZ sing Y N 289 PHE CE2 HE2 sing N N 290 PHE CZ HZ sing N N 291 PHE OXT HXT sing N N 292 PRO N CA sing N N 293 PRO N CD sing N N 294 PRO N H sing N N 295 PRO CA C sing N N 296 PRO CA CB sing N N 297 PRO CA HA sing N N 298 PRO C O doub N N 299 PRO C OXT sing N N 300 PRO CB CG sing N N 301 PRO CB HB2 sing N N 302 PRO CB HB3 sing N N 303 PRO CG CD sing N N 304 PRO CG HG2 sing N N 305 PRO CG HG3 sing N N 306 PRO CD HD2 sing N N 307 PRO CD HD3 sing N N 308 PRO OXT HXT sing N N 309 SER N CA sing N N 310 SER N H sing N N 311 SER N H2 sing N N 312 SER CA C sing N N 313 SER CA CB sing N N 314 SER CA HA sing N N 315 SER C O doub N N 316 SER C OXT sing N N 317 SER CB OG sing N N 318 SER CB HB2 sing N N 319 SER CB HB3 sing N N 320 SER OG HG sing N N 321 SER OXT HXT sing N N 322 THR N CA sing N N 323 THR N H sing N N 324 THR N H2 sing N N 325 THR CA C sing N N 326 THR CA CB sing N N 327 THR CA HA sing N N 328 THR C O doub N N 329 THR C OXT sing N N 330 THR CB OG1 sing N N 331 THR CB CG2 sing N N 332 THR CB HB sing N N 333 THR OG1 HG1 sing N N 334 THR CG2 HG21 sing N N 335 THR CG2 HG22 sing N N 336 THR CG2 HG23 sing N N 337 THR OXT HXT sing N N 338 TRP N CA sing N N 339 TRP N H sing N N 340 TRP N H2 sing N N 341 TRP CA C sing N N 342 TRP CA CB sing N N 343 TRP CA HA sing N N 344 TRP C O doub N N 345 TRP C OXT sing N N 346 TRP CB CG sing N N 347 TRP CB HB2 sing N N 348 TRP CB HB3 sing N N 349 TRP CG CD1 doub Y N 350 TRP CG CD2 sing Y N 351 TRP CD1 NE1 sing Y N 352 TRP CD1 HD1 sing N N 353 TRP CD2 CE2 doub Y N 354 TRP CD2 CE3 sing Y N 355 TRP NE1 CE2 sing Y N 356 TRP NE1 HE1 sing N N 357 TRP CE2 CZ2 sing Y N 358 TRP CE3 CZ3 doub Y N 359 TRP CE3 HE3 sing N N 360 TRP CZ2 CH2 doub Y N 361 TRP CZ2 HZ2 sing N N 362 TRP CZ3 CH2 sing Y N 363 TRP CZ3 HZ3 sing N N 364 TRP CH2 HH2 sing N N 365 TRP OXT HXT sing N N 366 TYR N CA sing N N 367 TYR N H sing N N 368 TYR N H2 sing N N 369 TYR CA C sing N N 370 TYR CA CB sing N N 371 TYR CA HA sing N N 372 TYR C O doub N N 373 TYR C OXT sing N N 374 TYR CB CG sing N N 375 TYR CB HB2 sing N N 376 TYR CB HB3 sing N N 377 TYR CG CD1 doub Y N 378 TYR CG CD2 sing Y N 379 TYR CD1 CE1 sing Y N 380 TYR CD1 HD1 sing N N 381 TYR CD2 CE2 doub Y N 382 TYR CD2 HD2 sing N N 383 TYR CE1 CZ doub Y N 384 TYR CE1 HE1 sing N N 385 TYR CE2 CZ sing Y N 386 TYR CE2 HE2 sing N N 387 TYR CZ OH sing N N 388 TYR OH HH sing N N 389 TYR OXT HXT sing N N 390 VAL N CA sing N N 391 VAL N H sing N N 392 VAL N H2 sing N N 393 VAL CA C sing N N 394 VAL CA CB sing N N 395 VAL CA HA sing N N 396 VAL C O doub N N 397 VAL C OXT sing N N 398 VAL CB CG1 sing N N 399 VAL CB CG2 sing N N 400 VAL CB HB sing N N 401 VAL CG1 HG11 sing N N 402 VAL CG1 HG12 sing N N 403 VAL CG1 HG13 sing N N 404 VAL CG2 HG21 sing N N 405 VAL CG2 HG22 sing N N 406 VAL CG2 HG23 sing N N 407 VAL OXT HXT sing N N 408 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number SC3GM112532 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' EPE 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6DBA _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #