HEADER RNA BINDING PROTEIN/RNA 07-MAY-18 6DCL TITLE CRYSTAL STRUCTURE OF UP1 BOUND TO PRI-MIRNA-18A TERMINAL LOOP COMPND MOL_ID: 1; COMPND 2 MOLECULE: HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: HNRNP A1,HELIX-DESTABILIZING PROTEIN,SINGLE-STRAND RNA- COMPND 5 BINDING PROTEIN,HNRNP CORE PROTEIN A1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: RNA (5'-R(*AP*GP*UP*AP*GP*AP*UP*UP*AP*GP*C)-3'); COMPND 9 CHAIN: C, D; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HNRNPA1, HNRPA1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606 KEYWDS RRM, HNRNP A1, RNA, COMPLEX, RNA BINDING PROTEIN, RNA BINDING KEYWDS 2 PROTEIN-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR H.KOOSHAPUR,M.SATTLER REVDAT 4 13-MAR-24 6DCL 1 REMARK REVDAT 3 08-JAN-20 6DCL 1 REMARK REVDAT 2 11-JUL-18 6DCL 1 JRNL REVDAT 1 27-JUN-18 6DCL 0 JRNL AUTH H.KOOSHAPUR,N.R.CHOUDHURY,B.SIMON,M.MUHLBAUER,A.JUSSUPOW, JRNL AUTH 2 N.FERNANDEZ,A.N.JONES,A.DALLMANN,F.GABEL,C.CAMILLONI, JRNL AUTH 3 G.MICHLEWSKI,J.F.CACERES,M.SATTLER JRNL TITL STRUCTURAL BASIS FOR TERMINAL LOOP RECOGNITION AND JRNL TITL 2 STIMULATION OF PRI-MIRNA-18A PROCESSING BY HNRNP A1. JRNL REF NAT COMMUN V. 9 2479 2018 JRNL REFN ESSN 2041-1723 JRNL PMID 29946118 JRNL DOI 10.1038/S41467-018-04871-9 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.07 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 24892 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 1259 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.0748 - 5.1924 1.00 2849 144 0.1749 0.1925 REMARK 3 2 5.1924 - 4.1221 1.00 2647 164 0.1573 0.2009 REMARK 3 3 4.1221 - 3.6012 1.00 2624 146 0.1753 0.2021 REMARK 3 4 3.6012 - 3.2720 1.00 2608 146 0.2140 0.2176 REMARK 3 5 3.2720 - 3.0376 1.00 2603 137 0.2488 0.2607 REMARK 3 6 3.0376 - 2.8585 1.00 2599 125 0.2575 0.2831 REMARK 3 7 2.8585 - 2.7153 1.00 2587 128 0.2625 0.3258 REMARK 3 8 2.7153 - 2.5972 1.00 2560 143 0.2762 0.3412 REMARK 3 9 2.5972 - 2.4972 0.99 2556 126 0.3222 0.3692 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.440 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 52.22 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 72.34 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3410 REMARK 3 ANGLE : 1.072 4684 REMARK 3 CHIRALITY : 0.060 520 REMARK 3 PLANARITY : 0.006 532 REMARK 3 DIHEDRAL : 13.294 1999 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 8 THROUGH 88 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.0295 18.9667 -11.4928 REMARK 3 T TENSOR REMARK 3 T11: 0.2563 T22: 0.4269 REMARK 3 T33: 0.2894 T12: 0.1756 REMARK 3 T13: 0.0330 T23: -0.0415 REMARK 3 L TENSOR REMARK 3 L11: 1.3226 L22: 6.2044 REMARK 3 L33: 1.9400 L12: 2.2141 REMARK 3 L13: 0.7001 L23: -0.3871 REMARK 3 S TENSOR REMARK 3 S11: 0.0073 S12: -0.0893 S13: 0.0840 REMARK 3 S21: 0.2875 S22: -0.1608 S23: 0.1640 REMARK 3 S31: -0.1633 S32: -0.0045 S33: 0.1393 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 89 THROUGH 105 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.9464 24.4001 -26.4352 REMARK 3 T TENSOR REMARK 3 T11: 0.4698 T22: 0.7804 REMARK 3 T33: 0.4291 T12: 0.2568 REMARK 3 T13: -0.0354 T23: -0.0007 REMARK 3 L TENSOR REMARK 3 L11: 9.1536 L22: 7.4829 REMARK 3 L33: 7.3034 L12: 1.3928 REMARK 3 L13: -5.7625 L23: 1.3601 REMARK 3 S TENSOR REMARK 3 S11: 0.1153 S12: 1.6870 S13: 0.4507 REMARK 3 S21: -0.8966 S22: -0.0009 S23: 0.8041 REMARK 3 S31: -0.3130 S32: -1.0864 S33: -0.1026 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 106 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.9527 38.5269 -33.9568 REMARK 3 T TENSOR REMARK 3 T11: 0.8689 T22: 0.8563 REMARK 3 T33: 0.6576 T12: 0.3987 REMARK 3 T13: 0.2495 T23: 0.1792 REMARK 3 L TENSOR REMARK 3 L11: 3.4862 L22: 2.9632 REMARK 3 L33: 5.5513 L12: 1.8330 REMARK 3 L13: 0.8435 L23: -1.2616 REMARK 3 S TENSOR REMARK 3 S11: 0.4329 S12: 1.0208 S13: 0.6848 REMARK 3 S21: -1.0400 S22: -0.0423 S23: -0.0693 REMARK 3 S31: -0.6970 S32: 0.1545 S33: -0.3767 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 8 THROUGH 88 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.3446 56.1483 -29.4791 REMARK 3 T TENSOR REMARK 3 T11: 1.2151 T22: 0.8459 REMARK 3 T33: 0.7897 T12: 0.7606 REMARK 3 T13: 0.1638 T23: 0.1494 REMARK 3 L TENSOR REMARK 3 L11: 1.4810 L22: 1.4370 REMARK 3 L33: 0.5416 L12: -0.9202 REMARK 3 L13: 0.1155 L23: 0.1099 REMARK 3 S TENSOR REMARK 3 S11: 0.1311 S12: 0.2496 S13: 0.5145 REMARK 3 S21: -0.4007 S22: -0.1302 S23: -0.2500 REMARK 3 S31: -0.3694 S32: -0.0481 S33: 0.1221 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 89 THROUGH 105 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.7350 39.0780 -29.1127 REMARK 3 T TENSOR REMARK 3 T11: 0.9767 T22: 0.9200 REMARK 3 T33: 0.7231 T12: 0.6386 REMARK 3 T13: 0.0790 T23: 0.0546 REMARK 3 L TENSOR REMARK 3 L11: 7.5680 L22: 0.4478 REMARK 3 L33: 1.6115 L12: -1.1236 REMARK 3 L13: -2.8771 L23: 0.8081 REMARK 3 S TENSOR REMARK 3 S11: 0.1231 S12: 0.6097 S13: -1.2270 REMARK 3 S21: -0.5827 S22: -0.4688 S23: 0.2881 REMARK 3 S31: 0.0636 S32: -0.0819 S33: 0.3016 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 106 THROUGH 183 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.1434 33.0126 -12.8201 REMARK 3 T TENSOR REMARK 3 T11: 0.5422 T22: 0.8975 REMARK 3 T33: 0.4787 T12: 0.3587 REMARK 3 T13: 0.0994 T23: 0.0243 REMARK 3 L TENSOR REMARK 3 L11: 4.9376 L22: 7.7438 REMARK 3 L33: 1.5558 L12: -2.6907 REMARK 3 L13: 1.1287 L23: -0.3024 REMARK 3 S TENSOR REMARK 3 S11: 0.1169 S12: -0.1428 S13: -0.0176 REMARK 3 S21: 0.3156 S22: -0.0634 S23: 0.5616 REMARK 3 S31: -0.2170 S32: -0.8907 S33: -0.0437 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 11 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.6310 16.9556 -20.7373 REMARK 3 T TENSOR REMARK 3 T11: 0.4303 T22: 0.8999 REMARK 3 T33: 0.5909 T12: 0.2576 REMARK 3 T13: 0.0240 T23: -0.1102 REMARK 3 L TENSOR REMARK 3 L11: 1.9199 L22: 3.4004 REMARK 3 L33: 0.0516 L12: -2.5363 REMARK 3 L13: 0.1414 L23: -0.1933 REMARK 3 S TENSOR REMARK 3 S11: -0.5104 S12: -0.5226 S13: -0.5063 REMARK 3 S21: 0.4700 S22: 0.1942 S23: 0.9534 REMARK 3 S31: -0.0283 S32: -0.7218 S33: 0.2952 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 11 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.2262 43.3204 -40.9288 REMARK 3 T TENSOR REMARK 3 T11: 1.2255 T22: 1.4184 REMARK 3 T33: 0.6438 T12: 0.7978 REMARK 3 T13: 0.1291 T23: 0.2039 REMARK 3 L TENSOR REMARK 3 L11: 0.1758 L22: 2.9751 REMARK 3 L33: 0.0151 L12: -0.7279 REMARK 3 L13: -0.0513 L23: 0.2179 REMARK 3 S TENSOR REMARK 3 S11: 0.5727 S12: 1.4130 S13: 0.3844 REMARK 3 S21: -0.5350 S22: -0.6320 S23: -0.0003 REMARK 3 S31: -0.0810 S32: 0.1399 S33: -0.0028 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN C AND RESID 3 THROUGH 10) REMARK 3 SELECTION : (CHAIN D AND RESID 3 THROUGH 10) REMARK 3 ATOM PAIRS NUMBER : 186 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 8 THROUGH 22 OR RESID REMARK 3 24 THROUGH 52 OR RESID 54 THROUGH 96 OR REMARK 3 RESID 98 THROUGH 131 OR RESID 133 THROUGH REMARK 3 139 OR RESID 145 THROUGH 182)) REMARK 3 SELECTION : (CHAIN B AND (RESID 8 THROUGH 22 OR RESID REMARK 3 24 THROUGH 52 OR RESID 54 THROUGH 96 OR REMARK 3 RESID 98 THROUGH 131 OR RESID 133 THROUGH REMARK 3 182)) REMARK 3 ATOM PAIRS NUMBER : 1605 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6DCL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-MAY-18. REMARK 100 THE DEPOSITION ID IS D_1000232489. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8726 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.9 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24934 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.497 REMARK 200 RESOLUTION RANGE LOW (A) : 48.070 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.800 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 9.20 REMARK 200 R MERGE FOR SHELL (I) : 0.95300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM CITRATE, 20% PEG 3350, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 98.04267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 49.02133 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 98.04267 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 49.02133 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 98.04267 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 49.02133 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 98.04267 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 49.02133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C 110 LIES ON A SPECIAL POSITION. REMARK 375 HOH C 111 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 ALA A -1 REMARK 465 MET A 0 REMARK 465 GLY A 1 REMARK 465 SER A 2 REMARK 465 LYS A 3 REMARK 465 SER A 4 REMARK 465 GLU A 5 REMARK 465 SER A 6 REMARK 465 GLY B -2 REMARK 465 ALA B -1 REMARK 465 MET B 0 REMARK 465 GLY B 1 REMARK 465 SER B 2 REMARK 465 LYS B 3 REMARK 465 SER B 4 REMARK 465 GLU B 5 REMARK 465 SER B 6 REMARK 465 PRO B 7 REMARK 465 ARG B 140 REMARK 465 GLY B 141 REMARK 465 SER B 142 REMARK 465 GLY B 143 REMARK 465 LYS B 144 REMARK 465 GLN B 184 REMARK 465 GLU B 185 REMARK 465 MET B 186 REMARK 465 ALA B 187 REMARK 465 SER B 188 REMARK 465 A C 12 REMARK 465 A D 12 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 C D 11 O5' C5' C4' O4' C3' O3' C2' REMARK 470 C D 11 O2' C1' N1 C2 O2 N3 C4 REMARK 470 C D 11 N4 C5 C6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG A 97 O HOH A 301 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 347 O HOH A 350 11555 1.87 REMARK 500 NH1 ARG B 82 OP2 U D 3 4565 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 8 -176.34 -61.60 REMARK 500 CYS A 43 118.75 -161.95 REMARK 500 ALA A 187 76.25 -69.39 REMARK 500 CYS B 43 117.23 -162.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 201 DBREF 6DCL A 2 188 UNP P09651 ROA1_HUMAN 2 188 DBREF 6DCL B 2 188 UNP P09651 ROA1_HUMAN 2 188 DBREF 6DCL C 1 12 PDB 6DCL 6DCL 1 12 DBREF 6DCL D 1 12 PDB 6DCL 6DCL 1 12 SEQADV 6DCL GLY A -2 UNP P09651 EXPRESSION TAG SEQADV 6DCL ALA A -1 UNP P09651 EXPRESSION TAG SEQADV 6DCL MET A 0 UNP P09651 EXPRESSION TAG SEQADV 6DCL GLY A 1 UNP P09651 EXPRESSION TAG SEQADV 6DCL GLY B -2 UNP P09651 EXPRESSION TAG SEQADV 6DCL ALA B -1 UNP P09651 EXPRESSION TAG SEQADV 6DCL MET B 0 UNP P09651 EXPRESSION TAG SEQADV 6DCL GLY B 1 UNP P09651 EXPRESSION TAG SEQRES 1 A 191 GLY ALA MET GLY SER LYS SER GLU SER PRO LYS GLU PRO SEQRES 2 A 191 GLU GLN LEU ARG LYS LEU PHE ILE GLY GLY LEU SER PHE SEQRES 3 A 191 GLU THR THR ASP GLU SER LEU ARG SER HIS PHE GLU GLN SEQRES 4 A 191 TRP GLY THR LEU THR ASP CYS VAL VAL MET ARG ASP PRO SEQRES 5 A 191 ASN THR LYS ARG SER ARG GLY PHE GLY PHE VAL THR TYR SEQRES 6 A 191 ALA THR VAL GLU GLU VAL ASP ALA ALA MET ASN ALA ARG SEQRES 7 A 191 PRO HIS LYS VAL ASP GLY ARG VAL VAL GLU PRO LYS ARG SEQRES 8 A 191 ALA VAL SER ARG GLU ASP SER GLN ARG PRO GLY ALA HIS SEQRES 9 A 191 LEU THR VAL LYS LYS ILE PHE VAL GLY GLY ILE LYS GLU SEQRES 10 A 191 ASP THR GLU GLU HIS HIS LEU ARG ASP TYR PHE GLU GLN SEQRES 11 A 191 TYR GLY LYS ILE GLU VAL ILE GLU ILE MET THR ASP ARG SEQRES 12 A 191 GLY SER GLY LYS LYS ARG GLY PHE ALA PHE VAL THR PHE SEQRES 13 A 191 ASP ASP HIS ASP SER VAL ASP LYS ILE VAL ILE GLN LYS SEQRES 14 A 191 TYR HIS THR VAL ASN GLY HIS ASN CYS GLU VAL ARG LYS SEQRES 15 A 191 ALA LEU SER LYS GLN GLU MET ALA SER SEQRES 1 B 191 GLY ALA MET GLY SER LYS SER GLU SER PRO LYS GLU PRO SEQRES 2 B 191 GLU GLN LEU ARG LYS LEU PHE ILE GLY GLY LEU SER PHE SEQRES 3 B 191 GLU THR THR ASP GLU SER LEU ARG SER HIS PHE GLU GLN SEQRES 4 B 191 TRP GLY THR LEU THR ASP CYS VAL VAL MET ARG ASP PRO SEQRES 5 B 191 ASN THR LYS ARG SER ARG GLY PHE GLY PHE VAL THR TYR SEQRES 6 B 191 ALA THR VAL GLU GLU VAL ASP ALA ALA MET ASN ALA ARG SEQRES 7 B 191 PRO HIS LYS VAL ASP GLY ARG VAL VAL GLU PRO LYS ARG SEQRES 8 B 191 ALA VAL SER ARG GLU ASP SER GLN ARG PRO GLY ALA HIS SEQRES 9 B 191 LEU THR VAL LYS LYS ILE PHE VAL GLY GLY ILE LYS GLU SEQRES 10 B 191 ASP THR GLU GLU HIS HIS LEU ARG ASP TYR PHE GLU GLN SEQRES 11 B 191 TYR GLY LYS ILE GLU VAL ILE GLU ILE MET THR ASP ARG SEQRES 12 B 191 GLY SER GLY LYS LYS ARG GLY PHE ALA PHE VAL THR PHE SEQRES 13 B 191 ASP ASP HIS ASP SER VAL ASP LYS ILE VAL ILE GLN LYS SEQRES 14 B 191 TYR HIS THR VAL ASN GLY HIS ASN CYS GLU VAL ARG LYS SEQRES 15 B 191 ALA LEU SER LYS GLN GLU MET ALA SER SEQRES 1 C 12 A G U A G A U U A G C A SEQRES 1 D 12 A G U A G A U U A G C A HET EDO A 201 4 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 5 EDO C2 H6 O2 FORMUL 6 HOH *72(H2 O) HELIX 1 AA1 GLU A 11 LEU A 13 5 3 HELIX 2 AA2 THR A 26 GLU A 35 1 10 HELIX 3 AA3 GLN A 36 GLY A 38 5 3 HELIX 4 AA4 THR A 64 ALA A 74 1 11 HELIX 5 AA5 SER A 91 GLN A 96 1 6 HELIX 6 AA6 GLU A 117 GLU A 126 1 10 HELIX 7 AA7 GLN A 127 GLY A 129 5 3 HELIX 8 AA8 ASP A 155 ILE A 164 1 10 HELIX 9 AA9 SER A 182 ALA A 187 1 6 HELIX 10 AB1 PRO B 10 LEU B 13 5 4 HELIX 11 AB2 THR B 26 GLU B 35 1 10 HELIX 12 AB3 GLN B 36 GLY B 38 5 3 HELIX 13 AB4 THR B 64 ALA B 74 1 11 HELIX 14 AB5 SER B 91 GLN B 96 1 6 HELIX 15 AB6 GLU B 117 GLU B 126 1 10 HELIX 16 AB7 GLN B 127 GLY B 129 5 3 HELIX 17 AB8 ASP B 155 ILE B 164 1 10 SHEET 1 AA1 5 LEU A 40 ARG A 47 0 SHEET 2 AA1 5 SER A 54 TYR A 62 -1 O ARG A 55 N MET A 46 SHEET 3 AA1 5 LYS A 15 GLY A 19 -1 N ILE A 18 O GLY A 58 SHEET 4 AA1 5 ARG A 82 ARG A 88 -1 O LYS A 87 N PHE A 17 SHEET 5 AA1 5 HIS A 77 VAL A 79 -1 N VAL A 79 O ARG A 82 SHEET 1 AA2 4 ILE A 131 THR A 138 0 SHEET 2 AA2 4 LYS A 145 PHE A 153 -1 O THR A 152 N VAL A 133 SHEET 3 AA2 4 LYS A 106 GLY A 110 -1 N VAL A 109 O ALA A 149 SHEET 4 AA2 4 GLU A 176 LYS A 179 -1 O ARG A 178 N PHE A 108 SHEET 1 AA3 2 THR A 169 VAL A 170 0 SHEET 2 AA3 2 HIS A 173 ASN A 174 -1 O HIS A 173 N VAL A 170 SHEET 1 AA4 5 LEU B 40 ARG B 47 0 SHEET 2 AA4 5 SER B 54 TYR B 62 -1 O ARG B 55 N MET B 46 SHEET 3 AA4 5 LYS B 15 GLY B 19 -1 N ILE B 18 O GLY B 58 SHEET 4 AA4 5 ARG B 82 ARG B 88 -1 O GLU B 85 N GLY B 19 SHEET 5 AA4 5 HIS B 77 VAL B 79 -1 N VAL B 79 O ARG B 82 SHEET 1 AA5 4 ILE B 131 ILE B 136 0 SHEET 2 AA5 4 PHE B 148 PHE B 153 -1 O THR B 152 N GLU B 132 SHEET 3 AA5 4 LYS B 106 GLY B 110 -1 N VAL B 109 O ALA B 149 SHEET 4 AA5 4 GLU B 176 LYS B 179 -1 O ARG B 178 N PHE B 108 SHEET 1 AA6 2 THR B 169 VAL B 170 0 SHEET 2 AA6 2 HIS B 173 ASN B 174 -1 O HIS B 173 N VAL B 170 CISPEP 1 ARG A 75 PRO A 76 0 -1.90 CISPEP 2 ARG B 75 PRO B 76 0 0.01 SITE 1 AC1 2 LYS A 15 G C 5 CRYST1 127.028 127.028 147.064 90.00 90.00 120.00 P 62 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007872 0.004545 0.000000 0.00000 SCALE2 0.000000 0.009090 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006800 0.00000