HEADER MEMBRANE PROTEIN 10-MAY-18 6DDF TITLE MU OPIOID RECEPTOR-GI PROTEIN COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: GUANINE NUCLEOTIDE-BINDING PROTEIN G(I) SUBUNIT ALPHA-1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ADENYLATE CYCLASE-INHIBITING G ALPHA PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: GUANINE NUCLEOTIDE-BINDING PROTEIN G(I)/G(S)/G(T) SUBUNIT COMPND 8 BETA-1; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: TRANSDUCIN BETA CHAIN 1; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: GUANINE NUCLEOTIDE-BINDING PROTEIN G(I)/G(S)/G(O) SUBUNIT COMPND 14 GAMMA-2; COMPND 15 CHAIN: C; COMPND 16 SYNONYM: G GAMMA-I; COMPND 17 ENGINEERED: YES; COMPND 18 MOL_ID: 4; COMPND 19 MOLECULE: MU-TYPE OPIOID RECEPTOR; COMPND 20 CHAIN: R; COMPND 21 SYNONYM: MOR-1; COMPND 22 ENGINEERED: YES; COMPND 23 MOL_ID: 5; COMPND 24 MOLECULE: DAMGO; COMPND 25 CHAIN: D; COMPND 26 ENGINEERED: YES; COMPND 27 OTHER_DETAILS: ANALOGUE OF ENKEPHALIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GNAI1; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: HIGH FIVE; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PVL1392; SOURCE 12 MOL_ID: 2; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606; SOURCE 16 GENE: GNB1; SOURCE 17 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 18 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 20 EXPRESSION_SYSTEM_STRAIN: HIGH FIVE; SOURCE 21 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 22 EXPRESSION_SYSTEM_PLASMID: PVL1392; SOURCE 23 MOL_ID: 3; SOURCE 24 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 25 ORGANISM_COMMON: HUMAN; SOURCE 26 ORGANISM_TAXID: 9606; SOURCE 27 GENE: GNG2; SOURCE 28 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 29 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 30 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 31 EXPRESSION_SYSTEM_STRAIN: HIGH FIVE; SOURCE 32 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 33 EXPRESSION_SYSTEM_PLASMID: PVL1392; SOURCE 34 MOL_ID: 4; SOURCE 35 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 36 ORGANISM_COMMON: MOUSE; SOURCE 37 ORGANISM_TAXID: 10090; SOURCE 38 GENE: OPRM1, MOR, OPRM; SOURCE 39 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 40 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 41 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 42 EXPRESSION_SYSTEM_STRAIN: SF9; SOURCE 43 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 44 EXPRESSION_SYSTEM_PLASMID: PVL 1392; SOURCE 45 MOL_ID: 5; SOURCE 46 SYNTHETIC: YES; SOURCE 47 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 48 ORGANISM_COMMON: HUMAN; SOURCE 49 ORGANISM_TAXID: 9606 KEYWDS COMPLEX, TRANSMEMBRANE, MEMBRANE PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR A.KOEHL,H.HU,S.MAEDA,A.MANGLIK,B.K.KOBILKA,G.SKINIOTIS,W.I.WEIS REVDAT 5 15-NOV-23 6DDF 1 LINK ATOM REVDAT 4 11-DEC-19 6DDF 1 REMARK REVDAT 3 04-JUL-18 6DDF 1 JRNL REVDAT 2 27-JUN-18 6DDF 1 JRNL REVDAT 1 13-JUN-18 6DDF 0 JRNL AUTH A.KOEHL,H.HU,S.MAEDA,Y.ZHANG,Q.QU,J.M.PAGGI,N.R.LATORRACA, JRNL AUTH 2 D.HILGER,R.DAWSON,H.MATILE,G.F.X.SCHERTLER,S.GRANIER, JRNL AUTH 3 W.I.WEIS,R.O.DROR,A.MANGLIK,G.SKINIOTIS,B.K.KOBILKA JRNL TITL STRUCTURE OF THE MU-OPIOID RECEPTOR-GIPROTEIN COMPLEX. JRNL REF NATURE V. 558 547 2018 JRNL REFN ISSN 0028-0836 JRNL PMID 29899455 JRNL DOI 10.1038/S41586-018-0219-7 REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : GCTF, RELION, FREALIGN REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.500 REMARK 3 NUMBER OF PARTICLES : 359406 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING ONLY REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6DDF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-MAY-18. REMARK 100 THE DEPOSITION ID IS D_1000234073. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : TERNARY COMPLEX OF DAMGO REMARK 245 -ACTIVATED MU-TYPE OPIOID REMARK 245 RECEPTOR WITH HETEROTRIMERIC GI REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 7.00 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : BLOT 1 SECOND BEFORE PLUNGING REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : SIGNALING COMPLEX FORMED BY REMARK 245 INCUBATION OF DAMGO-BOUND MU-TYPE OPIOID RECEPTOR AND REMARK 245 HETEROTRIMERIC GI. EXCESS GDP REMOVED BY ADDITION OF APYRASE. REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 2642 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 3700.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : 48076 REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, R, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 REMARK 400 THE DAMGO IS PEPTIDE-LIKE, A MEMBER OF CLASS. REMARK 400 REMARK 400 GROUP: 1 REMARK 400 NAME: DAMGO REMARK 400 CHAIN: D REMARK 400 COMPONENT_1: PEPTIDE LIKE POLYMER REMARK 400 DESCRIPTION: NULL REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 CYS A 3 REMARK 465 THR A 4 REMARK 465 ILE A 56 REMARK 465 HIS A 57 REMARK 465 GLU A 58 REMARK 465 ALA A 59 REMARK 465 GLY A 60 REMARK 465 TYR A 61 REMARK 465 SER A 62 REMARK 465 GLU A 63 REMARK 465 GLU A 64 REMARK 465 GLU A 65 REMARK 465 CYS A 66 REMARK 465 LYS A 67 REMARK 465 GLN A 68 REMARK 465 TYR A 69 REMARK 465 LYS A 70 REMARK 465 ALA A 71 REMARK 465 VAL A 72 REMARK 465 VAL A 73 REMARK 465 TYR A 74 REMARK 465 SER A 75 REMARK 465 ASN A 76 REMARK 465 THR A 77 REMARK 465 ILE A 78 REMARK 465 GLN A 79 REMARK 465 SER A 80 REMARK 465 ILE A 81 REMARK 465 ILE A 82 REMARK 465 ALA A 83 REMARK 465 ILE A 84 REMARK 465 ILE A 85 REMARK 465 ARG A 86 REMARK 465 ALA A 87 REMARK 465 MET A 88 REMARK 465 GLY A 89 REMARK 465 ARG A 90 REMARK 465 LEU A 91 REMARK 465 LYS A 92 REMARK 465 ILE A 93 REMARK 465 ASP A 94 REMARK 465 PHE A 95 REMARK 465 GLY A 96 REMARK 465 ASP A 97 REMARK 465 SER A 98 REMARK 465 ALA A 99 REMARK 465 ARG A 100 REMARK 465 ALA A 101 REMARK 465 ASP A 102 REMARK 465 ASP A 103 REMARK 465 ALA A 104 REMARK 465 ARG A 105 REMARK 465 GLN A 106 REMARK 465 LEU A 107 REMARK 465 PHE A 108 REMARK 465 VAL A 109 REMARK 465 LEU A 110 REMARK 465 ALA A 111 REMARK 465 GLY A 112 REMARK 465 ALA A 113 REMARK 465 ALA A 114 REMARK 465 GLU A 115 REMARK 465 GLU A 116 REMARK 465 GLY A 117 REMARK 465 PHE A 118 REMARK 465 MET A 119 REMARK 465 THR A 120 REMARK 465 ALA A 121 REMARK 465 GLU A 122 REMARK 465 LEU A 123 REMARK 465 ALA A 124 REMARK 465 GLY A 125 REMARK 465 VAL A 126 REMARK 465 ILE A 127 REMARK 465 LYS A 128 REMARK 465 ARG A 129 REMARK 465 LEU A 130 REMARK 465 TRP A 131 REMARK 465 LYS A 132 REMARK 465 ASP A 133 REMARK 465 SER A 134 REMARK 465 GLY A 135 REMARK 465 VAL A 136 REMARK 465 GLN A 137 REMARK 465 ALA A 138 REMARK 465 CYS A 139 REMARK 465 PHE A 140 REMARK 465 ASN A 141 REMARK 465 ARG A 142 REMARK 465 SER A 143 REMARK 465 ARG A 144 REMARK 465 GLU A 145 REMARK 465 TYR A 146 REMARK 465 GLN A 147 REMARK 465 LEU A 148 REMARK 465 ASN A 149 REMARK 465 ASP A 150 REMARK 465 SER A 151 REMARK 465 ALA A 152 REMARK 465 ALA A 153 REMARK 465 TYR A 154 REMARK 465 TYR A 155 REMARK 465 LEU A 156 REMARK 465 ASN A 157 REMARK 465 ASP A 158 REMARK 465 LEU A 159 REMARK 465 ASP A 160 REMARK 465 ARG A 161 REMARK 465 ILE A 162 REMARK 465 ALA A 163 REMARK 465 GLN A 164 REMARK 465 PRO A 165 REMARK 465 ASN A 166 REMARK 465 TYR A 167 REMARK 465 ILE A 168 REMARK 465 PRO A 169 REMARK 465 THR A 170 REMARK 465 GLN A 171 REMARK 465 GLN A 172 REMARK 465 ASP A 173 REMARK 465 VAL A 174 REMARK 465 LEU A 175 REMARK 465 ARG A 176 REMARK 465 THR A 177 REMARK 465 ARG A 178 REMARK 465 VAL A 179 REMARK 465 LYS A 180 REMARK 465 THR A 181 REMARK 465 LEU A 234 REMARK 465 ALA A 235 REMARK 465 GLU A 236 REMARK 465 ASP A 237 REMARK 465 GLU A 238 REMARK 465 GLU A 239 REMARK 465 MET A 240 REMARK 465 PRO B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 SER B 0 REMARK 465 GLY B 1 REMARK 465 SER B 2 REMARK 465 GLU B 3 REMARK 465 LEU B 4 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 SER C 3 REMARK 465 ASN C 4 REMARK 465 ASN C 5 REMARK 465 THR C 6 REMARK 465 ALA C 7 REMARK 465 SER C 8 REMARK 465 ARG C 62 REMARK 465 GLU C 63 REMARK 465 LYS C 64 REMARK 465 LYS C 65 REMARK 465 PHE C 66 REMARK 465 PHE C 67 REMARK 465 CYS C 68 REMARK 465 ALA C 69 REMARK 465 ILE C 70 REMARK 465 LEU C 71 REMARK 465 ASN R 3 REMARK 465 ILE R 4 REMARK 465 SER R 5 REMARK 465 ASP R 6 REMARK 465 CYS R 7 REMARK 465 SER R 8 REMARK 465 ASP R 9 REMARK 465 PRO R 10 REMARK 465 LEU R 11 REMARK 465 ALA R 12 REMARK 465 PRO R 13 REMARK 465 ALA R 14 REMARK 465 SER R 15 REMARK 465 CYS R 16 REMARK 465 SER R 17 REMARK 465 PRO R 18 REMARK 465 ALA R 19 REMARK 465 PRO R 20 REMARK 465 GLY R 21 REMARK 465 SER R 22 REMARK 465 TRP R 23 REMARK 465 LEU R 24 REMARK 465 ASN R 25 REMARK 465 LEU R 26 REMARK 465 SER R 27 REMARK 465 HIS R 28 REMARK 465 VAL R 29 REMARK 465 ASP R 30 REMARK 465 GLY R 31 REMARK 465 ASN R 32 REMARK 465 GLN R 33 REMARK 465 SER R 34 REMARK 465 ASP R 35 REMARK 465 PRO R 36 REMARK 465 CYS R 37 REMARK 465 GLY R 38 REMARK 465 PRO R 39 REMARK 465 ASN R 40 REMARK 465 ARG R 41 REMARK 465 THR R 42 REMARK 465 GLY R 43 REMARK 465 LEU R 44 REMARK 465 GLY R 45 REMARK 465 GLU R 46 REMARK 465 ASN R 47 REMARK 465 LEU R 48 REMARK 465 TYR R 49 REMARK 465 PHE R 50 REMARK 465 GLN R 51 REMARK 465 GLY R 52 REMARK 465 SER R 53 REMARK 465 HIS R 54 REMARK 465 SER R 55 REMARK 465 LEU R 56 REMARK 465 CYS R 57 REMARK 465 PRO R 58 REMARK 465 GLN R 59 REMARK 465 THR R 60 REMARK 465 GLY R 61 REMARK 465 SER R 62 REMARK 465 PRO R 63 REMARK 465 SER R 64 REMARK 465 CYS R 346 REMARK 465 PHE R 347 REMARK 465 ARG R 348 REMARK 465 GLU R 349 REMARK 465 PHE R 350 REMARK 465 CYS R 351 REMARK 465 ILE R 352 REMARK 465 PRO R 353 REMARK 465 THR R 354 REMARK 465 SER R 355 REMARK 465 SER R 356 REMARK 465 THR R 357 REMARK 465 ILE R 358 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 5 CG CD1 CD2 REMARK 470 GLU A 28 CG CD OE1 OE2 REMARK 470 GLU A 43 CG CD OE1 OE2 REMARK 470 ILE A 55 CG1 CG2 CD1 REMARK 470 GLU A 207 CG CD OE1 OE2 REMARK 470 ASN A 241 CG OD1 ND2 REMARK 470 LYS A 270 CG CD CE NZ REMARK 470 GLU A 275 CG CD OE1 OE2 REMARK 470 LYS A 279 CG CD CE NZ REMARK 470 LYS A 280 CG CD CE NZ REMARK 470 ILE A 285 CG1 CG2 CD1 REMARK 470 CYS A 305 SG REMARK 470 GLU A 308 CG CD OE1 OE2 REMARK 470 GLU A 318 CG CD OE1 OE2 REMARK 470 THR A 327 OG1 CG2 REMARK 470 ASP A 337 CG OD1 OD2 REMARK 470 ASP A 350 CG OD1 OD2 REMARK 470 LYS B 23 CG CD CE NZ REMARK 470 CYS B 25 SG REMARK 470 SER B 31 OG REMARK 470 ARG B 46 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 130 CG CD OE1 OE2 REMARK 470 ARG B 214 CG CD NE CZ NH1 NH2 REMARK 470 MET B 217 CG SD CE REMARK 470 ASN B 237 CG OD1 ND2 REMARK 470 CYS B 271 SG REMARK 470 LYS B 301 CG CD CE NZ REMARK 470 ASP B 312 CG OD1 OD2 REMARK 470 CYS B 317 SG REMARK 470 ASP C 26 CG OD1 OD2 REMARK 470 ASP C 48 CG OD1 OD2 REMARK 470 SER C 57 OG REMARK 470 GLU C 58 CG CD OE1 OE2 REMARK 470 MET R 65 CG SD CE REMARK 470 VAL R 66 CG1 CG2 REMARK 470 THR R 67 OG1 CG2 REMARK 470 ILE R 69 CG1 CG2 CD1 REMARK 470 MET R 72 CG SD CE REMARK 470 LEU R 74 CG CD1 CD2 REMARK 470 SER R 76 OG REMARK 470 ILE R 77 CG1 CG2 CD1 REMARK 470 VAL R 80 CG1 CG2 REMARK 470 VAL R 81 CG1 CG2 REMARK 470 VAL R 94 CG1 CG2 REMARK 470 ARG R 95 CG CD NE CZ NH1 NH2 REMARK 470 LYS R 100 CG CD CE NZ REMARK 470 ASP R 114 CG OD1 OD2 REMARK 470 SER R 119 OG REMARK 470 SER R 125 OG REMARK 470 LEU R 129 CG CD1 CD2 REMARK 470 THR R 132 OG1 CG2 REMARK 470 ASN R 137 CG OD1 ND2 REMARK 470 ILE R 138 CG1 CG2 CD1 REMARK 470 LYS R 185 CG CD CE NZ REMARK 470 ILE R 186 CG1 CG2 CD1 REMARK 470 ILE R 193 CG1 CG2 CD1 REMARK 470 MET R 203 CG SD CE REMARK 470 LYS R 209 CG CD CE NZ REMARK 470 GLN R 212 CG CD OE1 NE2 REMARK 470 ILE R 215 CG1 CG2 CD1 REMARK 470 PHE R 221 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASN R 230 CG OD1 ND2 REMARK 470 LEU R 246 CG CD1 CD2 REMARK 470 VAL R 291 CG1 CG2 REMARK 470 THR R 294 OG1 CG2 REMARK 470 LYS R 303 CG CD CE NZ REMARK 470 THR R 307 OG1 CG2 REMARK 470 PHE R 313 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER R 317 OG REMARK 470 PHE R 343 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS R 344 CG CD CE NZ REMARK 470 ARG R 345 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ETA D 5 C - N - CA ANGL. DEV. = -15.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 229 37.70 -97.99 REMARK 500 ASN A 294 51.78 -95.82 REMARK 500 THR A 295 -167.16 -127.74 REMARK 500 THR B 87 -2.47 67.33 REMARK 500 CYS B 114 -168.88 -118.29 REMARK 500 THR B 143 -31.76 -130.56 REMARK 500 ASP B 163 50.20 -93.24 REMARK 500 THR B 164 -8.74 72.05 REMARK 500 LEU B 308 64.01 -101.37 REMARK 500 GLU C 47 54.27 -91.55 REMARK 500 THR R 132 -169.99 -103.41 REMARK 500 PRO R 134 44.84 -82.67 REMARK 500 THR R 207 -165.94 -79.81 REMARK 500 SER R 214 -177.80 -179.92 REMARK 500 PHE R 241 -35.52 -131.53 REMARK 500 SER R 268 76.39 59.57 REMARK 500 LEU R 339 55.61 -95.81 REMARK 500 MEA D 4 84.02 58.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-7868 RELATED DB: EMDB REMARK 900 RELATED ID: 6DDE RELATED DB: PDB REMARK 900 RELATED ID: EMD-7869 RELATED DB: EMDB DBREF 6DDF A 1 354 UNP P63096 GNAI1_HUMAN 1 354 DBREF 6DDF B 2 340 UNP P62873 GBB1_HUMAN 2 340 DBREF 6DDF C 1 71 UNP P59768 GBG2_HUMAN 1 71 DBREF 6DDF R 3 358 UNP P42866 OPRM_MOUSE 9 358 DBREF 6DDF D 1 5 PDB 6DDF 6DDF 1 5 SEQADV 6DDF PRO B -3 UNP P62873 EXPRESSION TAG SEQADV 6DDF GLY B -2 UNP P62873 EXPRESSION TAG SEQADV 6DDF SER B -1 UNP P62873 EXPRESSION TAG SEQADV 6DDF SER B 0 UNP P62873 EXPRESSION TAG SEQADV 6DDF GLY B 1 UNP P62873 EXPRESSION TAG SEQADV 6DDF GLU R 46 UNP P42866 INSERTION SEQADV 6DDF ASN R 47 UNP P42866 INSERTION SEQADV 6DDF LEU R 48 UNP P42866 INSERTION SEQADV 6DDF TYR R 49 UNP P42866 INSERTION SEQADV 6DDF PHE R 50 UNP P42866 INSERTION SEQADV 6DDF GLN R 51 UNP P42866 INSERTION SEQRES 1 A 354 MET GLY CYS THR LEU SER ALA GLU ASP LYS ALA ALA VAL SEQRES 2 A 354 GLU ARG SER LYS MET ILE ASP ARG ASN LEU ARG GLU ASP SEQRES 3 A 354 GLY GLU LYS ALA ALA ARG GLU VAL LYS LEU LEU LEU LEU SEQRES 4 A 354 GLY ALA GLY GLU SER GLY LYS SER THR ILE VAL LYS GLN SEQRES 5 A 354 MET LYS ILE ILE HIS GLU ALA GLY TYR SER GLU GLU GLU SEQRES 6 A 354 CYS LYS GLN TYR LYS ALA VAL VAL TYR SER ASN THR ILE SEQRES 7 A 354 GLN SER ILE ILE ALA ILE ILE ARG ALA MET GLY ARG LEU SEQRES 8 A 354 LYS ILE ASP PHE GLY ASP SER ALA ARG ALA ASP ASP ALA SEQRES 9 A 354 ARG GLN LEU PHE VAL LEU ALA GLY ALA ALA GLU GLU GLY SEQRES 10 A 354 PHE MET THR ALA GLU LEU ALA GLY VAL ILE LYS ARG LEU SEQRES 11 A 354 TRP LYS ASP SER GLY VAL GLN ALA CYS PHE ASN ARG SER SEQRES 12 A 354 ARG GLU TYR GLN LEU ASN ASP SER ALA ALA TYR TYR LEU SEQRES 13 A 354 ASN ASP LEU ASP ARG ILE ALA GLN PRO ASN TYR ILE PRO SEQRES 14 A 354 THR GLN GLN ASP VAL LEU ARG THR ARG VAL LYS THR THR SEQRES 15 A 354 GLY ILE VAL GLU THR HIS PHE THR PHE LYS ASP LEU HIS SEQRES 16 A 354 PHE LYS MET PHE ASP VAL GLY GLY GLN ARG SER GLU ARG SEQRES 17 A 354 LYS LYS TRP ILE HIS CYS PHE GLU GLY VAL THR ALA ILE SEQRES 18 A 354 ILE PHE CYS VAL ALA LEU SER ASP TYR ASP LEU VAL LEU SEQRES 19 A 354 ALA GLU ASP GLU GLU MET ASN ARG MET HIS GLU SER MET SEQRES 20 A 354 LYS LEU PHE ASP SER ILE CYS ASN ASN LYS TRP PHE THR SEQRES 21 A 354 ASP THR SER ILE ILE LEU PHE LEU ASN LYS LYS ASP LEU SEQRES 22 A 354 PHE GLU GLU LYS ILE LYS LYS SER PRO LEU THR ILE CYS SEQRES 23 A 354 TYR PRO GLU TYR ALA GLY SER ASN THR TYR GLU GLU ALA SEQRES 24 A 354 ALA ALA TYR ILE GLN CYS GLN PHE GLU ASP LEU ASN LYS SEQRES 25 A 354 ARG LYS ASP THR LYS GLU ILE TYR THR HIS PHE THR CYS SEQRES 26 A 354 ALA THR ASP THR LYS ASN VAL GLN PHE VAL PHE ASP ALA SEQRES 27 A 354 VAL THR ASP VAL ILE ILE LYS ASN ASN LEU LYS ASP CYS SEQRES 28 A 354 GLY LEU PHE SEQRES 1 B 344 PRO GLY SER SER GLY SER GLU LEU ASP GLN LEU ARG GLN SEQRES 2 B 344 GLU ALA GLU GLN LEU LYS ASN GLN ILE ARG ASP ALA ARG SEQRES 3 B 344 LYS ALA CYS ALA ASP ALA THR LEU SER GLN ILE THR ASN SEQRES 4 B 344 ASN ILE ASP PRO VAL GLY ARG ILE GLN MET ARG THR ARG SEQRES 5 B 344 ARG THR LEU ARG GLY HIS LEU ALA LYS ILE TYR ALA MET SEQRES 6 B 344 HIS TRP GLY THR ASP SER ARG LEU LEU VAL SER ALA SER SEQRES 7 B 344 GLN ASP GLY LYS LEU ILE ILE TRP ASP SER TYR THR THR SEQRES 8 B 344 ASN LYS VAL HIS ALA ILE PRO LEU ARG SER SER TRP VAL SEQRES 9 B 344 MET THR CYS ALA TYR ALA PRO SER GLY ASN TYR VAL ALA SEQRES 10 B 344 CYS GLY GLY LEU ASP ASN ILE CYS SER ILE TYR ASN LEU SEQRES 11 B 344 LYS THR ARG GLU GLY ASN VAL ARG VAL SER ARG GLU LEU SEQRES 12 B 344 ALA GLY HIS THR GLY TYR LEU SER CYS CYS ARG PHE LEU SEQRES 13 B 344 ASP ASP ASN GLN ILE VAL THR SER SER GLY ASP THR THR SEQRES 14 B 344 CYS ALA LEU TRP ASP ILE GLU THR GLY GLN GLN THR THR SEQRES 15 B 344 THR PHE THR GLY HIS THR GLY ASP VAL MET SER LEU SER SEQRES 16 B 344 LEU ALA PRO ASP THR ARG LEU PHE VAL SER GLY ALA CYS SEQRES 17 B 344 ASP ALA SER ALA LYS LEU TRP ASP VAL ARG GLU GLY MET SEQRES 18 B 344 CYS ARG GLN THR PHE THR GLY HIS GLU SER ASP ILE ASN SEQRES 19 B 344 ALA ILE CYS PHE PHE PRO ASN GLY ASN ALA PHE ALA THR SEQRES 20 B 344 GLY SER ASP ASP ALA THR CYS ARG LEU PHE ASP LEU ARG SEQRES 21 B 344 ALA ASP GLN GLU LEU MET THR TYR SER HIS ASP ASN ILE SEQRES 22 B 344 ILE CYS GLY ILE THR SER VAL SER PHE SER LYS SER GLY SEQRES 23 B 344 ARG LEU LEU LEU ALA GLY TYR ASP ASP PHE ASN CYS ASN SEQRES 24 B 344 VAL TRP ASP ALA LEU LYS ALA ASP ARG ALA GLY VAL LEU SEQRES 25 B 344 ALA GLY HIS ASP ASN ARG VAL SER CYS LEU GLY VAL THR SEQRES 26 B 344 ASP ASP GLY MET ALA VAL ALA THR GLY SER TRP ASP SER SEQRES 27 B 344 PHE LEU LYS ILE TRP ASN SEQRES 1 C 71 MET ALA SER ASN ASN THR ALA SER ILE ALA GLN ALA ARG SEQRES 2 C 71 LYS LEU VAL GLU GLN LEU LYS MET GLU ALA ASN ILE ASP SEQRES 3 C 71 ARG ILE LYS VAL SER LYS ALA ALA ALA ASP LEU MET ALA SEQRES 4 C 71 TYR CYS GLU ALA HIS ALA LYS GLU ASP PRO LEU LEU THR SEQRES 5 C 71 PRO VAL PRO ALA SER GLU ASN PRO PHE ARG GLU LYS LYS SEQRES 6 C 71 PHE PHE CYS ALA ILE LEU SEQRES 1 R 356 ASN ILE SER ASP CYS SER ASP PRO LEU ALA PRO ALA SER SEQRES 2 R 356 CYS SER PRO ALA PRO GLY SER TRP LEU ASN LEU SER HIS SEQRES 3 R 356 VAL ASP GLY ASN GLN SER ASP PRO CYS GLY PRO ASN ARG SEQRES 4 R 356 THR GLY LEU GLY GLU ASN LEU TYR PHE GLN GLY SER HIS SEQRES 5 R 356 SER LEU CYS PRO GLN THR GLY SER PRO SER MET VAL THR SEQRES 6 R 356 ALA ILE THR ILE MET ALA LEU TYR SER ILE VAL CYS VAL SEQRES 7 R 356 VAL GLY LEU PHE GLY ASN PHE LEU VAL MET TYR VAL ILE SEQRES 8 R 356 VAL ARG TYR THR LYS MET LYS THR ALA THR ASN ILE TYR SEQRES 9 R 356 ILE PHE ASN LEU ALA LEU ALA ASP ALA LEU ALA THR SER SEQRES 10 R 356 THR LEU PRO PHE GLN SER VAL ASN TYR LEU MET GLY THR SEQRES 11 R 356 TRP PRO PHE GLY ASN ILE LEU CYS LYS ILE VAL ILE SER SEQRES 12 R 356 ILE ASP TYR TYR ASN MET PHE THR SER ILE PHE THR LEU SEQRES 13 R 356 CYS THR MET SER VAL ASP ARG TYR ILE ALA VAL CYS HIS SEQRES 14 R 356 PRO VAL LYS ALA LEU ASP PHE ARG THR PRO ARG ASN ALA SEQRES 15 R 356 LYS ILE VAL ASN VAL CYS ASN TRP ILE LEU SER SER ALA SEQRES 16 R 356 ILE GLY LEU PRO VAL MET PHE MET ALA THR THR LYS TYR SEQRES 17 R 356 ARG GLN GLY SER ILE ASP CYS THR LEU THR PHE SER HIS SEQRES 18 R 356 PRO THR TRP TYR TRP GLU ASN LEU LEU LYS ILE CYS VAL SEQRES 19 R 356 PHE ILE PHE ALA PHE ILE MET PRO VAL LEU ILE ILE THR SEQRES 20 R 356 VAL CYS TYR GLY LEU MET ILE LEU ARG LEU LYS SER VAL SEQRES 21 R 356 ARG MET LEU SER GLY SER LYS GLU LYS ASP ARG ASN LEU SEQRES 22 R 356 ARG ARG ILE THR ARG MET VAL LEU VAL VAL VAL ALA VAL SEQRES 23 R 356 PHE ILE VAL CYS TRP THR PRO ILE HIS ILE TYR VAL ILE SEQRES 24 R 356 ILE LYS ALA LEU ILE THR ILE PRO GLU THR THR PHE GLN SEQRES 25 R 356 THR VAL SER TRP HIS PHE CYS ILE ALA LEU GLY TYR THR SEQRES 26 R 356 ASN SER CYS LEU ASN PRO VAL LEU TYR ALA PHE LEU ASP SEQRES 27 R 356 GLU ASN PHE LYS ARG CYS PHE ARG GLU PHE CYS ILE PRO SEQRES 28 R 356 THR SER SER THR ILE SEQRES 1 D 5 TYR DAL GLY MEA ETA HET DAL D 2 5 HET MEA D 4 12 HET ETA D 5 4 HETNAM DAL D-ALANINE HETNAM MEA N-METHYLPHENYLALANINE HETNAM ETA ETHANOLAMINE FORMUL 5 DAL C3 H7 N O2 FORMUL 5 MEA C10 H13 N O2 FORMUL 5 ETA C2 H7 N O HELIX 1 AA1 GLU A 8 ARG A 32 1 25 HELIX 2 AA2 SER A 47 LYS A 51 5 5 HELIX 3 AA3 GLU A 207 GLU A 216 5 10 HELIX 4 AA4 ARG A 242 ASN A 255 1 14 HELIX 5 AA5 LYS A 270 ILE A 278 1 9 HELIX 6 AA6 GLU A 298 ASP A 309 1 12 HELIX 7 AA7 LYS A 330 CYS A 351 1 22 HELIX 8 AA8 GLN B 6 CYS B 25 1 20 HELIX 9 AA9 GLN C 11 ASN C 24 1 14 HELIX 10 AB1 ALA C 34 ALA C 43 1 10 HELIX 11 AB2 THR R 70 THR R 97 1 28 HELIX 12 AB3 THR R 101 LEU R 121 1 21 HELIX 13 AB4 LEU R 121 MET R 130 1 10 HELIX 14 AB5 GLY R 136 HIS R 171 1 36 HELIX 15 AB6 LYS R 174 ARG R 179 1 6 HELIX 16 AB7 ARG R 182 PHE R 204 1 23 HELIX 17 AB8 GLU R 229 PHE R 241 1 13 HELIX 18 AB9 PHE R 241 THR R 249 1 9 HELIX 19 AC1 THR R 249 LYS R 260 1 12 HELIX 20 AC2 SER R 268 THR R 294 1 27 HELIX 21 AC3 THR R 294 ILE R 306 1 13 HELIX 22 AC4 PHE R 313 TYR R 326 1 14 HELIX 23 AC5 TYR R 326 TYR R 336 1 11 SHEET 1 AA1 4 GLU A 186 THR A 190 0 SHEET 2 AA1 4 HIS A 195 ASP A 200 -1 O MET A 198 N THR A 187 SHEET 3 AA1 4 VAL A 34 GLY A 40 1 N LEU A 36 O LYS A 197 SHEET 4 AA1 4 ALA A 220 CYS A 224 1 O ILE A 222 N LEU A 37 SHEET 1 AA2 2 LEU A 266 PHE A 267 0 SHEET 2 AA2 2 THR A 321 HIS A 322 1 O HIS A 322 N LEU A 266 SHEET 1 AA3 2 THR B 47 LEU B 51 0 SHEET 2 AA3 2 LEU B 336 TRP B 339 -1 O LEU B 336 N LEU B 51 SHEET 1 AA4 4 HIS B 62 TRP B 63 0 SHEET 2 AA4 4 LEU B 70 SER B 72 -1 O VAL B 71 N HIS B 62 SHEET 3 AA4 4 LYS B 78 TRP B 82 -1 O ILE B 80 N SER B 72 SHEET 4 AA4 4 LYS B 89 PRO B 94 -1 O HIS B 91 N ILE B 81 SHEET 1 AA5 4 ALA B 104 TYR B 105 0 SHEET 2 AA5 4 TYR B 111 ALA B 113 -1 O ALA B 113 N ALA B 104 SHEET 3 AA5 4 CYS B 121 ASN B 125 -1 O TYR B 124 N VAL B 112 SHEET 4 AA5 4 ARG B 134 LEU B 139 -1 O ARG B 134 N ASN B 125 SHEET 1 AA6 4 LEU B 146 PHE B 151 0 SHEET 2 AA6 4 GLN B 156 SER B 161 -1 O VAL B 158 N ARG B 150 SHEET 3 AA6 4 THR B 165 ASP B 170 -1 O TRP B 169 N ILE B 157 SHEET 4 AA6 4 GLN B 176 THR B 181 -1 O THR B 178 N LEU B 168 SHEET 1 AA7 4 VAL B 187 SER B 191 0 SHEET 2 AA7 4 LEU B 198 ALA B 203 -1 O GLY B 202 N MET B 188 SHEET 3 AA7 4 SER B 207 ASP B 212 -1 O LYS B 209 N SER B 201 SHEET 4 AA7 4 GLN B 220 THR B 223 -1 O PHE B 222 N ALA B 208 SHEET 1 AA8 4 ILE B 229 PHE B 234 0 SHEET 2 AA8 4 ALA B 240 SER B 245 -1 O GLY B 244 N ASN B 230 SHEET 3 AA8 4 CYS B 250 ASP B 254 -1 O ARG B 251 N THR B 243 SHEET 4 AA8 4 GLU B 260 MET B 262 -1 O MET B 262 N LEU B 252 SHEET 1 AA9 4 ILE B 273 PHE B 278 0 SHEET 2 AA9 4 LEU B 284 TYR B 289 -1 O LEU B 286 N SER B 277 SHEET 3 AA9 4 ASN B 295 ASP B 298 -1 O TRP B 297 N LEU B 285 SHEET 4 AA9 4 ARG B 304 VAL B 307 -1 O ALA B 305 N VAL B 296 SHEET 1 AB1 2 VAL B 315 VAL B 320 0 SHEET 2 AB1 2 VAL B 327 SER B 331 -1 O GLY B 330 N CYS B 317 SSBOND 1 CYS R 140 CYS R 217 1555 1555 2.03 LINK C TYR D 1 N DAL D 2 1555 1555 1.33 LINK C DAL D 2 N GLY D 3 1555 1555 1.33 LINK C GLY D 3 N MEA D 4 1555 1555 1.34 LINK C MEA D 4 N ETA D 5 1555 1555 1.43 CISPEP 1 HIS R 223 PRO R 224 0 2.35 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000