HEADER HYDROLASE 10-MAY-18 6DDU TITLE MOUSE BETA-MANNOSIDASE BOUND TO BETA-D-MANNOSE (MANBA) COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-MANNOSIDASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: LYSOSOMAL BETA A MANNOSIDASE,MANNANASE,MANNASE; COMPND 5 EC: 3.2.1.25; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: MANBA, BMN; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS MANNOSIDASE LYSOSOMAL GLYCOSIDASE GH2, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR H.GYTZ,J.LIANG,Y.LIANG,A.GORELIK,K.ILLES,B.NAGAR REVDAT 5 11-OCT-23 6DDU 1 HETSYN LINK REVDAT 4 29-JUL-20 6DDU 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 08-JAN-20 6DDU 1 REMARK REVDAT 2 17-APR-19 6DDU 1 JRNL REVDAT 1 09-JAN-19 6DDU 0 JRNL AUTH H.GYTZ,J.LIANG,Y.LIANG,A.GORELIK,K.ILLES,B.NAGAR JRNL TITL THE STRUCTURE OF MAMMALIAN BETA-MANNOSIDASE PROVIDES INSIGHT JRNL TITL 2 INTO BETA-MANNOSIDOSIS AND NYSTAGMUS. JRNL REF FEBS J. V. 286 1319 2019 JRNL REFN ISSN 1742-4658 JRNL PMID 30552791 JRNL DOI 10.1111/FEBS.14731 REMARK 2 REMARK 2 RESOLUTION. 2.67 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.67 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.39 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 77.2 REMARK 3 NUMBER OF REFLECTIONS : 24414 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.180 REMARK 3 FREE R VALUE TEST SET COUNT : 1996 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.3997 - 6.4258 1.00 2156 198 0.1935 0.2691 REMARK 3 2 6.4258 - 5.1024 1.00 2096 187 0.1907 0.2292 REMARK 3 3 5.1024 - 4.4581 1.00 2085 186 0.1510 0.1906 REMARK 3 4 4.4581 - 4.0507 0.99 2050 177 0.1622 0.1910 REMARK 3 5 4.0507 - 3.7605 0.98 2010 187 0.1803 0.2377 REMARK 3 6 3.7605 - 3.5389 0.93 1940 174 0.2005 0.2591 REMARK 3 7 3.5389 - 3.3617 0.90 1842 158 0.2211 0.2581 REMARK 3 8 3.3617 - 3.2154 0.84 1742 160 0.2379 0.2836 REMARK 3 9 3.2154 - 3.0917 0.77 1584 123 0.2616 0.3373 REMARK 3 10 3.0917 - 2.9850 0.67 1370 125 0.2586 0.2994 REMARK 3 11 2.9850 - 2.8917 0.60 1216 123 0.2664 0.3061 REMARK 3 12 2.8917 - 2.8090 0.49 1016 88 0.2754 0.3019 REMARK 3 13 2.8090 - 2.7351 0.40 823 65 0.2938 0.2742 REMARK 3 14 2.7351 - 2.6684 0.23 488 45 0.2927 0.3232 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.510 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 7369 REMARK 3 ANGLE : 0.512 10031 REMARK 3 CHIRALITY : 0.042 1092 REMARK 3 PLANARITY : 0.003 1261 REMARK 3 DIHEDRAL : 12.563 2673 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 18 THROUGH 212 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.0551 62.4766 121.9234 REMARK 3 T TENSOR REMARK 3 T11: 0.2057 T22: 0.0966 REMARK 3 T33: 0.1864 T12: -0.0309 REMARK 3 T13: -0.0347 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 0.0987 L22: 0.0776 REMARK 3 L33: 0.2054 L12: 0.0829 REMARK 3 L13: 0.0371 L23: 0.0718 REMARK 3 S TENSOR REMARK 3 S11: 0.0045 S12: -0.0072 S13: -0.0867 REMARK 3 S21: 0.0569 S22: 0.0352 S23: -0.1020 REMARK 3 S31: -0.2092 S32: 0.1107 S33: 0.0358 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 213 THROUGH 357 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.2579 68.5495 148.5899 REMARK 3 T TENSOR REMARK 3 T11: 0.4197 T22: 0.2097 REMARK 3 T33: 0.2052 T12: -0.0897 REMARK 3 T13: 0.0310 T23: -0.0752 REMARK 3 L TENSOR REMARK 3 L11: 0.0257 L22: 0.0082 REMARK 3 L33: 0.0161 L12: 0.0066 REMARK 3 L13: 0.0175 L23: -0.0001 REMARK 3 S TENSOR REMARK 3 S11: -0.0003 S12: -0.0429 S13: 0.0349 REMARK 3 S21: 0.0694 S22: -0.0644 S23: 0.0299 REMARK 3 S31: -0.0848 S32: -0.0836 S33: -0.0103 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 358 THROUGH 516 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.2500 51.4490 138.3587 REMARK 3 T TENSOR REMARK 3 T11: 0.2392 T22: 0.0805 REMARK 3 T33: 0.1744 T12: 0.0047 REMARK 3 T13: -0.0874 T23: -0.0063 REMARK 3 L TENSOR REMARK 3 L11: 0.0762 L22: 0.0075 REMARK 3 L33: 0.1785 L12: -0.0233 REMARK 3 L13: -0.0498 L23: 0.0128 REMARK 3 S TENSOR REMARK 3 S11: 0.0263 S12: 0.0120 S13: -0.0219 REMARK 3 S21: 0.1010 S22: -0.0989 S23: -0.0540 REMARK 3 S31: 0.0640 S32: -0.0247 S33: -0.0165 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 517 THROUGH 879 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.5695 37.6367 126.0247 REMARK 3 T TENSOR REMARK 3 T11: 0.2554 T22: 0.3803 REMARK 3 T33: 0.2914 T12: -0.1848 REMARK 3 T13: -0.0305 T23: -0.0918 REMARK 3 L TENSOR REMARK 3 L11: 0.0011 L22: 0.0256 REMARK 3 L33: 0.2198 L12: -0.0008 REMARK 3 L13: -0.0106 L23: 0.0747 REMARK 3 S TENSOR REMARK 3 S11: -0.0167 S12: 0.0299 S13: -0.0426 REMARK 3 S21: 0.0265 S22: -0.0735 S23: 0.1797 REMARK 3 S31: 0.1605 S32: -0.3204 S33: -0.3835 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6DDU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-MAY-18. REMARK 100 THE DEPOSITION ID IS D_1000234448. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-SEP-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24414 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.668 REMARK 200 RESOLUTION RANGE LOW (A) : 46.393 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 77.2 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.67 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.77 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6DDT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 9-21% PEG 5000, 0.1 M HEPES, PH 7, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 32.82550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 12 REMARK 465 ARG A 13 REMARK 465 HIS A 14 REMARK 465 HIS A 15 REMARK 465 HIS A 16 REMARK 465 HIS A 17 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O TYR A 62 HH22 ARG A 585 1.49 REMARK 500 OD2 ASP A 661 HG SER A 667 1.49 REMARK 500 HZ1 LYS A 631 OD1 ASN A 786 1.51 REMARK 500 OD1 ASP A 539 HE2 HIS A 602 1.53 REMARK 500 O LYS A 444 HH22 ARG A 500 1.59 REMARK 500 HH TYR A 524 O HOH A 1005 1.59 REMARK 500 O HOH A 1038 O HOH A 1067 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 19 43.59 -87.32 REMARK 500 ARG A 64 -115.34 46.17 REMARK 500 PRO A 87 30.36 -91.15 REMARK 500 THR A 105 -58.10 -140.40 REMARK 500 ASP A 120 14.71 -156.75 REMARK 500 HIS A 177 33.25 73.46 REMARK 500 SER A 189 160.73 92.69 REMARK 500 PRO A 197 91.31 -67.06 REMARK 500 ILE A 212 -74.33 71.04 REMARK 500 ARG A 324 139.91 -172.42 REMARK 500 GLU A 330 72.14 -111.01 REMARK 500 VAL A 389 97.26 -69.63 REMARK 500 ASN A 488 -71.90 -110.98 REMARK 500 TRP A 518 8.47 82.73 REMARK 500 TYR A 555 139.17 176.11 REMARK 500 TRP A 575 58.91 -90.68 REMARK 500 HIS A 602 -6.53 -140.48 REMARK 500 LEU A 659 -72.11 -82.25 REMARK 500 SER A 738 70.40 -100.86 REMARK 500 LYS A 779 -45.22 66.73 REMARK 500 ALA A 823 -171.22 -174.03 REMARK 500 SER A 871 126.31 -170.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 901 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 508 O REMARK 620 2 ASN A 509 OD1 76.2 REMARK 620 3 PRO A 523 O 92.1 82.5 REMARK 620 4 SER A 525 O 153.6 110.3 114.0 REMARK 620 5 TYR A 528 O 87.1 91.6 174.1 67.4 REMARK 620 6 ASP A 530 O 68.7 143.6 89.2 105.5 95.9 REMARK 620 N 1 2 3 4 5 DBREF 6DDU A 22 879 UNP Q8K2I4 MANBA_MOUSE 22 879 SEQADV 6DDU ASP A 12 UNP Q8K2I4 EXPRESSION TAG SEQADV 6DDU ARG A 13 UNP Q8K2I4 EXPRESSION TAG SEQADV 6DDU HIS A 14 UNP Q8K2I4 EXPRESSION TAG SEQADV 6DDU HIS A 15 UNP Q8K2I4 EXPRESSION TAG SEQADV 6DDU HIS A 16 UNP Q8K2I4 EXPRESSION TAG SEQADV 6DDU HIS A 17 UNP Q8K2I4 EXPRESSION TAG SEQADV 6DDU HIS A 18 UNP Q8K2I4 EXPRESSION TAG SEQADV 6DDU HIS A 19 UNP Q8K2I4 EXPRESSION TAG SEQADV 6DDU LYS A 20 UNP Q8K2I4 EXPRESSION TAG SEQADV 6DDU LEU A 21 UNP Q8K2I4 EXPRESSION TAG SEQRES 1 A 868 ASP ARG HIS HIS HIS HIS HIS HIS LYS LEU SER TYR SER SEQRES 2 A 868 LEU SER GLY SER TRP ARG VAL SER ASN GLY ASN GLY SER SEQRES 3 A 868 LEU GLU LEU PRO ALA THR VAL PRO GLY TYR VAL HIS SER SEQRES 4 A 868 ALA LEU HIS GLN HIS GLY LEU ILE GLN ASP PRO TYR TYR SEQRES 5 A 868 ARG PHE ASN ASP LEU ASN TYR ARG TRP ILE SER LEU ASP SEQRES 6 A 868 ASN TRP THR TYR SER THR GLU PHE LYS ILE PRO PHE ASN SEQRES 7 A 868 LEU SER GLU TRP GLN LYS VAL LYS LEU ILE PHE ASP GLY SEQRES 8 A 868 VAL ASP THR VAL ALA GLU ILE LEU PHE ASN ASN VAL THR SEQRES 9 A 868 ILE GLY LYS THR ASP ASN MET PHE THR GLY TYR SER PHE SEQRES 10 A 868 ASP ILE THR ASN VAL VAL LYS ASP VAL ASN SER LEU LYS SEQRES 11 A 868 LEU GLN PHE ARG SER ALA VAL GLN TYR ALA GLU CYS GLN SEQRES 12 A 868 SER LYS ALA HIS THR SER TYR ARG VAL PRO PRO GLU CYS SEQRES 13 A 868 PRO PRO VAL GLU GLN LYS GLY GLU CYS HIS VAL ASN PHE SEQRES 14 A 868 ILE ARG LYS ALA GLN CYS SER PHE SER TRP ASP TRP GLY SEQRES 15 A 868 PRO SER PHE PRO SER GLN GLY ILE TRP LYS ASP VAL ARG SEQRES 16 A 868 ILE GLU ALA TYR ASN ILE ALA HIS LEU ASP TYR LEU THR SEQRES 17 A 868 PHE LEU PRO VAL TYR ASP ASN ALA SER GLN ALA TRP ASN SEQRES 18 A 868 ILE GLU ILE LYS ALA SER PHE ASP VAL ALA SER SER LYS SEQRES 19 A 868 SER VAL GLY GLY GLN VAL THR VAL ALA ILE PRO GLN LEU SEQRES 20 A 868 LYS THR GLN GLN THR ASN ASP ILE GLU LEU GLN GLN GLU SEQRES 21 A 868 GLN ARG ILE VAL LYS LEU LEU VAL LYS ILE ARG LYS ASP SEQRES 22 A 868 VAL ALA VAL GLU THR TRP TRP PRO ARG GLY HIS GLY ASN SEQRES 23 A 868 GLN THR GLY TYR ASN MET THR ILE LEU PHE ALA LEU ASP SEQRES 24 A 868 GLY GLY LEU LYS ILE GLU LYS ALA ALA LYS VAL TYR PHE SEQRES 25 A 868 ARG THR VAL GLN LEU ILE GLU GLU GLY ILE LYS GLY SER SEQRES 26 A 868 PRO GLY LEU SER PHE TYR PHE LYS ILE ASN GLY LEU PRO SEQRES 27 A 868 ILE PHE LEU LYS GLY SER ASN TRP ILE PRO ALA ASP SER SEQRES 28 A 868 PHE GLN ASP LYS VAL THR SER ASP ARG LEU GLN LEU LEU SEQRES 29 A 868 PHE GLN SER VAL VAL ASP ALA ASN MET ASN THR LEU ARG SEQRES 30 A 868 VAL TRP GLY GLY GLY ILE TYR GLU GLN ASP GLU PHE TYR SEQRES 31 A 868 ALA LEU CYS ASP GLU LEU GLY ILE MET VAL TRP GLN ASP SEQRES 32 A 868 PHE MET PHE ALA SER ALA LEU TYR PRO THR GLU PRO GLY SEQRES 33 A 868 PHE LEU ALA SER VAL ARG LYS GLU VAL THR TYR GLN VAL SEQRES 34 A 868 ARG ARG LEU LYS SER HIS PRO SER ILE ILE ILE TRP SER SEQRES 35 A 868 GLY ASN ASN GLU ASN GLU VAL ALA LEU SER VAL ASN TRP SEQRES 36 A 868 PHE HIS VAL ASN PRO ARG ASP MET LYS THR TYR ILE ASP SEQRES 37 A 868 ASP TYR VAL THR LEU TYR VAL LYS ASN ILE ARG LYS ILE SEQRES 38 A 868 VAL LEU SER GLU ASP LYS SER ARG PRO PHE ILE ALA SER SEQRES 39 A 868 SER PRO THR ASN GLY MET LYS THR MET GLU GLU GLY TRP SEQRES 40 A 868 ILE SER TYR ASP PRO TYR SER ILE GLN TYR GLY ASP ILE SEQRES 41 A 868 HIS PHE TYR ASN TYR ALA ASP ASP CYS TRP ASN TRP LYS SEQRES 42 A 868 ILE PHE PRO LYS ALA ARG LEU VAL SER GLU TYR GLY TYR SEQRES 43 A 868 GLN SER TRP PRO SER PHE SER THR LEU GLU LYS VAL SER SEQRES 44 A 868 SER GLN GLU ASP TRP ALA TYR ASN SER ARG PHE SER LEU SEQRES 45 A 868 HIS ARG GLN HIS HIS GLU ASP GLY ASN HIS GLN MET LEU SEQRES 46 A 868 HIS GLN VAL LYS MET HIS PHE LYS LEU PRO GLN GLY THR SEQRES 47 A 868 ASP PRO LEU ARG THR PHE LYS ASP THR ILE TYR LEU THR SEQRES 48 A 868 GLN VAL MET GLN ALA GLN CYS ILE LYS THR GLU THR GLU SEQRES 49 A 868 PHE TYR LEU ARG SER ARG SER GLU ILE VAL ASP GLY LYS SEQRES 50 A 868 GLY HIS THR MET GLY ALA LEU TYR TRP GLN LEU ASN ASP SEQRES 51 A 868 ILE TRP GLN ALA PRO SER TRP ALA SER LEU GLU TYR GLY SEQRES 52 A 868 GLY LYS TRP LYS MET LEU HIS TYR PHE ALA ARG ARG PHE SEQRES 53 A 868 PHE ALA PRO LEU LEU PRO VAL GLY PHE GLU ASP GLU GLY SEQRES 54 A 868 VAL PHE TYR VAL TYR GLY VAL SER ASP LEU HIS LYS ASP SEQRES 55 A 868 HIS HIS THR GLN LEU THR VAL ARG LEU HIS HIS TRP SER SEQRES 56 A 868 SER PRO LYS PRO LEU CYS SER LEU VAL ASN SER SER ILE SEQRES 57 A 868 VAL VAL LYS ALA GLY GLU ALA VAL VAL LEU PHE GLN MET SEQRES 58 A 868 PRO VAL SER GLU LEU LEU LYS ARG CYS ARG GLY CYS THR SEQRES 59 A 868 ARG GLU THR CYS VAL VAL SER PHE TYR PHE SER THR ASP SEQRES 60 A 868 LYS GLU LEU PHE SER PRO THR ASN TYR HIS PHE LEU SER SEQRES 61 A 868 SER LEU LYS ASP ALA LYS GLY LEU LEU GLU ALA ASN ILE SEQRES 62 A 868 THR VAL ASN ILE SER GLN LYS GLY ASN VAL PHE VAL PHE SEQRES 63 A 868 ASP LEU GLU THR SER ALA VAL ALA PRO PHE VAL TRP LEU SEQRES 64 A 868 ASP VAL GLY SER ILE PRO GLY ARG PHE SER ASP ASN GLY SEQRES 65 A 868 PHE LEU MET ILE ARG LYS LYS LEU SER VAL LEU PHE TYR SEQRES 66 A 868 PRO TRP LYS PRO THR SER LYS SER GLU LEU GLN GLN ALA SEQRES 67 A 868 PHE SER VAL THR SER LEU THR ASP THR TYR HET NAG B 1 26 HET FUC B 2 20 HET NAG C 1 26 HET NAG C 2 27 HET NAG D 1 25 HET FUC D 2 20 HET CA A 901 1 HET NAG A 902 27 HET NAG A 909 27 HET NAG A 910 27 HET BMA A 911 24 HET EDO A 912 10 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM CA CALCIUM ION HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM EDO 1,2-ETHANEDIOL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN EDO ETHYLENE GLYCOL FORMUL 2 NAG 7(C8 H15 N O6) FORMUL 2 FUC 2(C6 H12 O5) FORMUL 5 CA CA 2+ FORMUL 9 BMA C6 H12 O6 FORMUL 10 EDO C2 H6 O2 FORMUL 11 HOH *69(H2 O) HELIX 1 AA1 VAL A 48 HIS A 55 1 8 HELIX 2 AA2 PHE A 65 TYR A 70 1 6 HELIX 3 AA3 TYR A 70 ASP A 76 1 7 HELIX 4 AA4 ASN A 89 TRP A 93 5 5 HELIX 5 AA5 SER A 146 HIS A 158 1 13 HELIX 6 AA6 PRO A 169 LYS A 173 5 5 HELIX 7 AA7 HIS A 177 ILE A 181 5 5 HELIX 8 AA8 ALA A 184 SER A 189 5 6 HELIX 9 AA9 PRO A 256 LYS A 259 5 4 HELIX 10 AB1 PHE A 363 VAL A 367 5 5 HELIX 11 AB2 THR A 368 ASP A 381 1 14 HELIX 12 AB3 GLN A 397 GLY A 408 1 12 HELIX 13 AB4 GLU A 425 LYS A 444 1 20 HELIX 14 AB5 GLU A 457 VAL A 464 1 8 HELIX 15 AB6 ASP A 473 VAL A 486 1 14 HELIX 16 AB7 ASN A 488 ASP A 497 1 10 HELIX 17 AB8 GLY A 510 GLU A 516 1 7 HELIX 18 AB9 ASN A 542 PHE A 546 5 5 HELIX 19 AC1 SER A 562 LYS A 568 1 7 HELIX 20 AC2 VAL A 569 SER A 570 5 2 HELIX 21 AC3 SER A 571 TRP A 575 5 5 HELIX 22 AC4 SER A 579 GLN A 586 1 8 HELIX 23 AC5 ASP A 590 LYS A 600 1 11 HELIX 24 AC6 ASP A 610 SER A 640 1 31 HELIX 25 AC7 LYS A 678 PHE A 688 1 11 HELIX 26 AC8 VAL A 754 CYS A 761 1 8 HELIX 27 AC9 SER A 792 ALA A 796 5 5 HELIX 28 AD1 SER A 862 PHE A 870 1 9 HELIX 29 AD2 SER A 874 TYR A 879 5 6 SHEET 1 AA1 4 LYS A 20 SER A 24 0 SHEET 2 AA1 4 VAL A 205 TYR A 210 -1 O ILE A 207 N TYR A 23 SHEET 3 AA1 4 LYS A 95 PHE A 100 -1 N LYS A 97 O GLU A 208 SHEET 4 AA1 4 TYR A 126 ASP A 129 -1 O TYR A 126 N PHE A 100 SHEET 1 AA2 6 GLU A 39 VAL A 44 0 SHEET 2 AA2 6 GLY A 27 SER A 32 -1 N TRP A 29 O ALA A 42 SHEET 3 AA2 6 THR A 79 LYS A 85 -1 O SER A 81 N ARG A 30 SHEET 4 AA2 6 VAL A 137 PHE A 144 -1 O LEU A 142 N TYR A 80 SHEET 5 AA2 6 ALA A 107 PHE A 111 -1 N GLU A 108 O GLN A 143 SHEET 6 AA2 6 THR A 115 THR A 119 -1 O GLY A 117 N ILE A 109 SHEET 1 AA3 2 GLY A 46 TYR A 47 0 SHEET 2 AA3 2 GLY A 200 ILE A 201 -1 O ILE A 201 N GLY A 46 SHEET 1 AA4 3 ALA A 213 TYR A 224 0 SHEET 2 AA4 3 TRP A 231 VAL A 241 -1 O ASN A 232 N VAL A 223 SHEET 3 AA4 3 ILE A 274 LYS A 280 -1 O VAL A 275 N ALA A 237 SHEET 1 AA5 4 THR A 260 LEU A 268 0 SHEET 2 AA5 4 VAL A 247 ILE A 255 -1 N VAL A 253 O GLN A 262 SHEET 3 AA5 4 TYR A 301 LEU A 309 -1 O ALA A 308 N GLN A 250 SHEET 4 AA5 4 LEU A 313 VAL A 321 -1 O VAL A 321 N TYR A 301 SHEET 1 AA6 3 VAL A 326 ILE A 329 0 SHEET 2 AA6 3 TYR A 342 ILE A 345 -1 O LYS A 344 N GLN A 327 SHEET 3 AA6 3 LEU A 348 ILE A 350 -1 O LEU A 348 N ILE A 345 SHEET 1 AA7 6 PHE A 502 ILE A 503 0 SHEET 2 AA7 6 ILE A 449 SER A 453 1 N TRP A 452 O ILE A 503 SHEET 3 AA7 6 MET A 410 ASP A 414 1 N VAL A 411 O ILE A 450 SHEET 4 AA7 6 THR A 386 VAL A 389 1 N LEU A 387 O MET A 410 SHEET 5 AA7 6 LEU A 352 TRP A 357 1 N TRP A 357 O ARG A 388 SHEET 6 AA7 6 GLY A 653 TYR A 656 1 O ALA A 654 N LEU A 352 SHEET 1 AA8 2 ASP A 530 PHE A 533 0 SHEET 2 AA8 2 LEU A 551 TYR A 555 1 O LEU A 551 N ILE A 531 SHEET 1 AA9 2 ILE A 644 VAL A 645 0 SHEET 2 AA9 2 LYS A 648 GLY A 649 -1 O LYS A 648 N VAL A 645 SHEET 1 AB1 3 LEU A 691 GLU A 697 0 SHEET 2 AB1 3 VAL A 701 SER A 708 -1 O TYR A 703 N PHE A 696 SHEET 3 AB1 3 ALA A 746 PRO A 753 -1 O LEU A 749 N VAL A 704 SHEET 1 AB2 4 CYS A 732 VAL A 741 0 SHEET 2 AB2 4 HIS A 714 HIS A 724 -1 N VAL A 720 O LEU A 734 SHEET 3 AB2 4 CYS A 769 PHE A 775 -1 O SER A 772 N ARG A 721 SHEET 4 AB2 4 ASN A 786 PHE A 789 -1 O ASN A 786 N PHE A 773 SHEET 1 AB3 4 THR A 805 LYS A 811 0 SHEET 2 AB3 4 VAL A 814 GLU A 820 -1 O VAL A 816 N SER A 809 SHEET 3 AB3 4 LYS A 850 PRO A 857 -1 O LEU A 851 N LEU A 819 SHEET 4 AB3 4 GLY A 837 PHE A 839 -1 N ARG A 838 O TYR A 856 SHEET 1 AB4 2 TRP A 829 ASP A 831 0 SHEET 2 AB4 2 SER A 871 THR A 873 -1 O THR A 873 N TRP A 829 SSBOND 1 CYS A 167 CYS A 176 1555 1555 2.04 SSBOND 2 CYS A 540 CYS A 629 1555 1555 2.03 SSBOND 3 CYS A 732 CYS A 761 1555 1555 2.03 SSBOND 4 CYS A 764 CYS A 769 1555 1555 2.03 LINK ND2 ASN A 35 C1 NAG A 910 1555 1555 1.44 LINK ND2 ASN A 77 C1 NAG A 902 1555 1555 1.44 LINK ND2 ASN A 113 C1 NAG B 1 1555 1555 1.44 LINK ND2 ASN A 297 C1 NAG A 909 1555 1555 1.44 LINK ND2 ASN A 302 C1 NAG C 1 1555 1555 1.45 LINK ND2 ASN A 803 C1 NAG D 1 1555 1555 1.44 LINK O6 NAG B 1 C1 FUC B 2 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O6 NAG D 1 C1 FUC D 2 1555 1555 1.44 LINK O THR A 508 CA CA A 901 1555 1555 2.84 LINK OD1 ASN A 509 CA CA A 901 1555 1555 2.49 LINK O PRO A 523 CA CA A 901 1555 1555 2.45 LINK O SER A 525 CA CA A 901 1555 1555 2.67 LINK O TYR A 528 CA CA A 901 1555 1555 2.68 LINK O ASP A 530 CA CA A 901 1555 1555 2.95 CISPEP 1 VAL A 44 PRO A 45 0 0.01 CISPEP 2 ASP A 104 THR A 105 0 2.54 CISPEP 3 PRO A 164 PRO A 165 0 -3.86 CISPEP 4 SER A 506 PRO A 507 0 2.10 CISPEP 5 TRP A 657 GLN A 658 0 -2.71 CRYST1 81.162 65.651 104.531 90.00 92.73 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012321 0.000000 0.000589 0.00000 SCALE2 0.000000 0.015232 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009577 0.00000