HEADER OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR 11-MAY-18 6DE4 TITLE HOMO SAPIENS DIHYDROFOLATE REDUCTASE COMPLEXED WITH BETA-NADPH AND 3'- TITLE 2 [(2R)-4-(2,4-DIAMINO-6-ETHYLPHENYL)BUT-3-YN-2-YL]-5'-METHOXY-[1,1'- TITLE 3 BIPHENYL]-4-CARBOXYLIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDROFOLATE REDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.5.1.3; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DHFR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DHFR, ANTIFOLATES, OXIDOREDUCTASE-OXIDOREDUCTASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR B.HAJIAN,D.WRIGHT REVDAT 4 11-OCT-23 6DE4 1 REMARK REVDAT 3 18-DEC-19 6DE4 1 REMARK REVDAT 2 10-JUL-19 6DE4 1 JRNL REVDAT 1 23-MAY-18 6DE4 0 JRNL AUTH B.HAJIAN,E.SCOCCHERA,C.SHOEN,J.KRUCINSKA,K.VISWANATHAN, JRNL AUTH 2 N.G-DAYANANDAN,H.ERLANDSEN,A.ESTRADA,K.MIKUSOVA, JRNL AUTH 3 J.KORDULAKOVA,M.CYNAMON,D.WRIGHT JRNL TITL DRUGGING THE FOLATE PATHWAY IN MYCOBACTERIUM TUBERCULOSIS: JRNL TITL 2 THE ROLE OF MULTI-TARGETING AGENTS. JRNL REF CELL CHEM BIOL V. 26 781 2019 JRNL REFN ESSN 2451-9456 JRNL PMID 30930162 JRNL DOI 10.1016/J.CHEMBIOL.2019.02.013 REMARK 2 REMARK 2 RESOLUTION. 2.41 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.41 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.36 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 30735 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.460 REMARK 3 FREE R VALUE TEST SET COUNT : 1987 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.3708 - 5.8055 0.99 2171 153 0.1997 0.2476 REMARK 3 2 5.8055 - 4.6098 1.00 2102 145 0.1634 0.1638 REMARK 3 3 4.6098 - 4.0276 1.00 2082 142 0.1426 0.1935 REMARK 3 4 4.0276 - 3.6596 1.00 2070 143 0.1685 0.2123 REMARK 3 5 3.6596 - 3.3974 1.00 2072 143 0.1713 0.2378 REMARK 3 6 3.3974 - 3.1972 1.00 2047 136 0.2012 0.2468 REMARK 3 7 3.1972 - 3.0371 1.00 2075 138 0.2199 0.2186 REMARK 3 8 3.0371 - 2.9049 1.00 2030 139 0.1992 0.2598 REMARK 3 9 2.9049 - 2.7931 1.00 2044 146 0.1888 0.2176 REMARK 3 10 2.7931 - 2.6968 1.00 2040 144 0.1921 0.2465 REMARK 3 11 2.6968 - 2.6124 1.00 2038 141 0.1985 0.2457 REMARK 3 12 2.6124 - 2.5378 1.00 2023 143 0.2136 0.2588 REMARK 3 13 2.5378 - 2.4710 1.00 2027 140 0.2163 0.2573 REMARK 3 14 2.4710 - 2.4107 0.95 1927 134 0.2154 0.2522 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.990 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3395 REMARK 3 ANGLE : 1.057 4620 REMARK 3 CHIRALITY : 0.041 477 REMARK 3 PLANARITY : 0.004 593 REMARK 3 DIHEDRAL : 16.352 1310 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6DE4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-MAY-18. REMARK 100 THE DEPOSITION ID IS D_1000234469. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-MAY-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30735 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.411 REMARK 200 RESOLUTION RANGE LOW (A) : 42.364 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08200 REMARK 200 FOR THE DATA SET : 7.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.41 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.45 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.77900 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 4KAK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS PH 7.6,0.2M LISO4, 15MM REMARK 280 CACL2, 6% ETOH, 15% ETHYLENE GLYCOL, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.16650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.16650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 52.30550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 52.33000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 52.30550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 52.33000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 72.16650 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 52.30550 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 52.33000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 72.16650 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 52.30550 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 52.33000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 322 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 328 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 316 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 323 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 123 N6A NDP A 201 1.99 REMARK 500 NH1 ARG A 91 O HOH A 301 2.01 REMARK 500 O2 SO4 B 207 O HOH B 301 2.04 REMARK 500 NZ LYS A 157 O HOH A 302 2.05 REMARK 500 CL CL A 203 O HOH A 337 2.05 REMARK 500 O2 SO4 B 206 O HOH B 302 2.06 REMARK 500 NZ LYS B 157 O HOH B 303 2.10 REMARK 500 OE1 GLU B 123 O HOH B 304 2.14 REMARK 500 O1X NDP A 201 O HOH A 303 2.14 REMARK 500 O EOH A 206 O HOH A 304 2.15 REMARK 500 NZ LYS A 68 O HOH A 305 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CL CL B 205 O HOH B 333 3657 1.93 REMARK 500 O EOH A 207 O EOH B 209 7557 2.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 18 116.91 -161.73 REMARK 500 ASN A 107 -45.77 72.13 REMARK 500 ASP A 110 -88.09 -95.32 REMARK 500 ASP A 110 -88.95 -95.32 REMARK 500 SER B 3 113.51 64.72 REMARK 500 LYS B 18 116.79 -160.17 REMARK 500 ASN B 107 -40.72 73.51 REMARK 500 ASP B 110 -89.05 -97.26 REMARK 500 ASP B 110 -90.06 -97.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NDP A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue G6Y A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EOH A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EOH A 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NDP B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue G6Y B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EOH B 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EOH B 209 DBREF 6DE4 A 1 186 UNP P00374 DYR_HUMAN 2 187 DBREF 6DE4 B 1 186 UNP P00374 DYR_HUMAN 2 187 SEQRES 1 A 186 VAL GLY SER LEU ASN CYS ILE VAL ALA VAL SER GLN ASN SEQRES 2 A 186 MET GLY ILE GLY LYS ASN GLY ASP LEU PRO TRP PRO PRO SEQRES 3 A 186 LEU ARG ASN GLU PHE ARG TYR PHE GLN ARG MET THR THR SEQRES 4 A 186 THR SER SER VAL GLU GLY LYS GLN ASN LEU VAL ILE MET SEQRES 5 A 186 GLY LYS LYS THR TRP PHE SER ILE PRO GLU LYS ASN ARG SEQRES 6 A 186 PRO LEU LYS GLY ARG ILE ASN LEU VAL LEU SER ARG GLU SEQRES 7 A 186 LEU LYS GLU PRO PRO GLN GLY ALA HIS PHE LEU SER ARG SEQRES 8 A 186 SER LEU ASP ASP ALA LEU LYS LEU THR GLU GLN PRO GLU SEQRES 9 A 186 LEU ALA ASN LYS VAL ASP MET VAL TRP ILE VAL GLY GLY SEQRES 10 A 186 SER SER VAL TYR LYS GLU ALA MET ASN HIS PRO GLY HIS SEQRES 11 A 186 LEU LYS LEU PHE VAL THR ARG ILE MET GLN ASP PHE GLU SEQRES 12 A 186 SER ASP THR PHE PHE PRO GLU ILE ASP LEU GLU LYS TYR SEQRES 13 A 186 LYS LEU LEU PRO GLU TYR PRO GLY VAL LEU SER ASP VAL SEQRES 14 A 186 GLN GLU GLU LYS GLY ILE LYS TYR LYS PHE GLU VAL TYR SEQRES 15 A 186 GLU LYS ASN ASP SEQRES 1 B 186 VAL GLY SER LEU ASN CYS ILE VAL ALA VAL SER GLN ASN SEQRES 2 B 186 MET GLY ILE GLY LYS ASN GLY ASP LEU PRO TRP PRO PRO SEQRES 3 B 186 LEU ARG ASN GLU PHE ARG TYR PHE GLN ARG MET THR THR SEQRES 4 B 186 THR SER SER VAL GLU GLY LYS GLN ASN LEU VAL ILE MET SEQRES 5 B 186 GLY LYS LYS THR TRP PHE SER ILE PRO GLU LYS ASN ARG SEQRES 6 B 186 PRO LEU LYS GLY ARG ILE ASN LEU VAL LEU SER ARG GLU SEQRES 7 B 186 LEU LYS GLU PRO PRO GLN GLY ALA HIS PHE LEU SER ARG SEQRES 8 B 186 SER LEU ASP ASP ALA LEU LYS LEU THR GLU GLN PRO GLU SEQRES 9 B 186 LEU ALA ASN LYS VAL ASP MET VAL TRP ILE VAL GLY GLY SEQRES 10 B 186 SER SER VAL TYR LYS GLU ALA MET ASN HIS PRO GLY HIS SEQRES 11 B 186 LEU LYS LEU PHE VAL THR ARG ILE MET GLN ASP PHE GLU SEQRES 12 B 186 SER ASP THR PHE PHE PRO GLU ILE ASP LEU GLU LYS TYR SEQRES 13 B 186 LYS LEU LEU PRO GLU TYR PRO GLY VAL LEU SER ASP VAL SEQRES 14 B 186 GLN GLU GLU LYS GLY ILE LYS TYR LYS PHE GLU VAL TYR SEQRES 15 B 186 GLU LYS ASN ASP HET NDP A 201 48 HET G6Y A 202 31 HET CL A 203 1 HET GOL A 204 14 HET GOL A 205 14 HET EOH A 206 9 HET EOH A 207 9 HET NDP B 201 48 HET G6Y B 202 31 HET CA B 203 1 HET CA B 204 1 HET CL B 205 1 HET SO4 B 206 5 HET SO4 B 207 5 HET EOH B 208 9 HET EOH B 209 9 HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE HETNAM G6Y 3'-[(2R)-4-(2,4-DIAMINO-6-ETHYLPYRIMIDIN-5-YL)BUT-3-YN- HETNAM 2 G6Y 2-YL]-5'-METHOXY[1,1'-BIPHENYL]-4-CARBOXYLIC ACID HETNAM CL CHLORIDE ION HETNAM GOL GLYCEROL HETNAM EOH ETHANOL HETNAM CA CALCIUM ION HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 NDP 2(C21 H30 N7 O17 P3) FORMUL 4 G6Y 2(C24 H24 N4 O3) FORMUL 5 CL 2(CL 1-) FORMUL 6 GOL 2(C3 H8 O3) FORMUL 8 EOH 4(C2 H6 O) FORMUL 12 CA 2(CA 2+) FORMUL 15 SO4 2(O4 S 2-) FORMUL 19 HOH *70(H2 O) HELIX 1 AA1 LEU A 27 THR A 40 1 14 HELIX 2 AA2 LYS A 54 ILE A 60 1 7 HELIX 3 AA3 PRO A 61 ARG A 65 5 5 HELIX 4 AA4 SER A 92 THR A 100 1 9 HELIX 5 AA5 GLY A 117 HIS A 127 1 11 HELIX 6 AA6 LEU B 27 THR B 40 1 14 HELIX 7 AA7 LYS B 54 ILE B 60 1 7 HELIX 8 AA8 PRO B 61 ARG B 65 5 5 HELIX 9 AA9 SER B 92 THR B 100 1 9 HELIX 10 AB1 GLY B 117 HIS B 127 1 11 SHEET 1 AA1 8 PHE A 88 SER A 90 0 SHEET 2 AA1 8 ARG A 70 LEU A 75 1 N VAL A 74 O SER A 90 SHEET 3 AA1 8 GLN A 47 GLY A 53 1 N VAL A 50 O ILE A 71 SHEET 4 AA1 8 VAL A 109 ILE A 114 1 O TRP A 113 N ILE A 51 SHEET 5 AA1 8 LEU A 4 VAL A 10 1 N ASN A 5 O ILE A 114 SHEET 6 AA1 8 LEU A 131 ILE A 138 1 O THR A 136 N VAL A 10 SHEET 7 AA1 8 ILE A 175 LYS A 184 -1 O GLU A 180 N VAL A 135 SHEET 8 AA1 8 LYS A 157 LEU A 158 -1 N LYS A 157 O GLU A 183 SHEET 1 AA2 8 PHE A 88 SER A 90 0 SHEET 2 AA2 8 ARG A 70 LEU A 75 1 N VAL A 74 O SER A 90 SHEET 3 AA2 8 GLN A 47 GLY A 53 1 N VAL A 50 O ILE A 71 SHEET 4 AA2 8 VAL A 109 ILE A 114 1 O TRP A 113 N ILE A 51 SHEET 5 AA2 8 LEU A 4 VAL A 10 1 N ASN A 5 O ILE A 114 SHEET 6 AA2 8 LEU A 131 ILE A 138 1 O THR A 136 N VAL A 10 SHEET 7 AA2 8 ILE A 175 LYS A 184 -1 O GLU A 180 N VAL A 135 SHEET 8 AA2 8 GLN A 170 GLU A 172 -1 N GLN A 170 O TYR A 177 SHEET 1 AA3 2 GLY A 15 GLY A 17 0 SHEET 2 AA3 2 THR A 146 PHE A 147 -1 O THR A 146 N ILE A 16 SHEET 1 AA4 8 PHE B 88 SER B 90 0 SHEET 2 AA4 8 ILE B 71 LEU B 75 1 N VAL B 74 O SER B 90 SHEET 3 AA4 8 GLN B 47 GLY B 53 1 N VAL B 50 O ILE B 71 SHEET 4 AA4 8 VAL B 109 ILE B 114 1 O TRP B 113 N LEU B 49 SHEET 5 AA4 8 LEU B 4 VAL B 10 1 N ASN B 5 O ILE B 114 SHEET 6 AA4 8 LEU B 131 ILE B 138 1 O PHE B 134 N CYS B 6 SHEET 7 AA4 8 ILE B 175 LYS B 184 -1 O GLU B 180 N VAL B 135 SHEET 8 AA4 8 LYS B 157 LEU B 158 -1 N LYS B 157 O GLU B 183 SHEET 1 AA5 8 PHE B 88 SER B 90 0 SHEET 2 AA5 8 ILE B 71 LEU B 75 1 N VAL B 74 O SER B 90 SHEET 3 AA5 8 GLN B 47 GLY B 53 1 N VAL B 50 O ILE B 71 SHEET 4 AA5 8 VAL B 109 ILE B 114 1 O TRP B 113 N LEU B 49 SHEET 5 AA5 8 LEU B 4 VAL B 10 1 N ASN B 5 O ILE B 114 SHEET 6 AA5 8 LEU B 131 ILE B 138 1 O PHE B 134 N CYS B 6 SHEET 7 AA5 8 ILE B 175 LYS B 184 -1 O GLU B 180 N VAL B 135 SHEET 8 AA5 8 GLN B 170 GLU B 172 -1 N GLN B 170 O TYR B 177 SHEET 1 AA6 2 GLY B 15 GLY B 17 0 SHEET 2 AA6 2 THR B 146 PHE B 147 -1 O THR B 146 N ILE B 16 CISPEP 1 ARG A 65 PRO A 66 0 1.49 CISPEP 2 GLY A 116 GLY A 117 0 2.97 CISPEP 3 ARG B 65 PRO B 66 0 0.12 CISPEP 4 GLY B 116 GLY B 117 0 4.82 SITE 1 AC1 29 VAL A 8 ALA A 9 ILE A 16 GLY A 17 SITE 2 AC1 29 GLY A 20 ASP A 21 LEU A 22 GLY A 53 SITE 3 AC1 29 LYS A 54 LYS A 55 THR A 56 SER A 59 SITE 4 AC1 29 LEU A 75 SER A 76 ARG A 77 GLU A 78 SITE 5 AC1 29 ARG A 91 VAL A 115 GLY A 116 GLY A 117 SITE 6 AC1 29 SER A 118 VAL A 120 TYR A 121 GLU A 123 SITE 7 AC1 29 THR A 146 G6Y A 202 HOH A 303 HOH A 306 SITE 8 AC1 29 HOH A 307 SITE 1 AC2 13 ILE A 7 VAL A 8 ALA A 9 GLU A 30 SITE 2 AC2 13 PHE A 31 PHE A 34 SER A 59 ASN A 64 SITE 3 AC2 13 VAL A 115 TYR A 121 THR A 136 NDP A 201 SITE 4 AC2 13 GOL A 204 SITE 1 AC3 3 ARG A 32 ARG A 36 HOH A 337 SITE 1 AC4 7 LEU A 22 TRP A 24 PRO A 26 LEU A 27 SITE 2 AC4 7 GLU A 30 PHE A 31 G6Y A 202 SITE 1 AC5 6 GLY A 2 SER A 3 SER A 42 ASP A 110 SITE 2 AC5 6 MET A 111 LYS A 132 SITE 1 AC6 2 ARG A 28 HOH A 304 SITE 1 AC7 4 PHE B 31 GLN B 35 EOH B 209 HOH B 306 SITE 1 AC8 28 VAL B 8 ALA B 9 ILE B 16 GLY B 17 SITE 2 AC8 28 GLY B 20 ASP B 21 GLY B 53 LYS B 54 SITE 3 AC8 28 LYS B 55 THR B 56 SER B 59 LEU B 75 SITE 4 AC8 28 SER B 76 ARG B 77 GLU B 78 ARG B 91 SITE 5 AC8 28 VAL B 115 GLY B 116 GLY B 117 SER B 118 SITE 6 AC8 28 SER B 119 VAL B 120 TYR B 121 GLU B 123 SITE 7 AC8 28 THR B 146 G6Y B 202 HOH B 304 HOH B 308 SITE 1 AC9 13 ILE B 7 VAL B 8 ALA B 9 ASP B 21 SITE 2 AC9 13 GLU B 30 PHE B 31 PHE B 34 SER B 59 SITE 3 AC9 13 ASN B 64 VAL B 115 TYR B 121 THR B 136 SITE 4 AC9 13 NDP B 201 SITE 1 AD1 2 ARG B 77 ARG B 91 SITE 1 AD2 1 GLY B 85 SITE 1 AD3 3 ARG B 32 ARG B 36 HOH B 333 SITE 1 AD4 5 GLU A 172 LYS A 173 GLY A 174 LYS B 98 SITE 2 AD4 5 HOH B 302 SITE 1 AD5 5 LYS A 98 GLU B 172 LYS B 173 GLY B 174 SITE 2 AD5 5 HOH B 301 SITE 1 AD6 4 GLN A 84 GLY A 85 LYS B 157 HOH B 303 SITE 1 AD7 4 ARG A 91 EOH A 207 HOH A 308 HOH B 306 CRYST1 104.611 104.660 144.333 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009559 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009555 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006928 0.00000