HEADER TRANSPORT PROTEIN 13-MAY-18 6DET TITLE THE CRYSTAL STRUCTURE OF TV2483 BOUND TO L-ARGININE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TV2483; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TREPONEMA VINCENTII; SOURCE 3 ORGANISM_TAXID: 69710; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ABC TRANSPORTER, AMINO-ACID-BINDING PROTEIN, LIGAND-BINDING PROTEIN, KEYWDS 2 TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.A.BRAUTIGAM,M.V.NORGARD REVDAT 3 13-MAR-24 6DET 1 REMARK REVDAT 2 18-DEC-19 6DET 1 REMARK REVDAT 1 20-MAR-19 6DET 0 JRNL AUTH R.K.DEKA,W.Z.LIU,S.C.TSO,M.V.NORGARD,C.A.BRAUTIGAM JRNL TITL BIOPHYSICAL INSIGHTS INTO A HIGHLY SELECTIVE JRNL TITL 2 L-ARGININE-BINDING LIPOPROTEIN OF A PATHOGENIC TREPONEME. JRNL REF PROTEIN SCI. V. 27 2037 2018 JRNL REFN ESSN 1469-896X JRNL PMID 30242931 JRNL DOI 10.1002/PRO.3510 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10_2155) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 3 NUMBER OF REFLECTIONS : 32941 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 1667 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.0139 - 4.0064 0.97 2796 150 0.1485 0.1584 REMARK 3 2 4.0064 - 3.1804 1.00 2761 143 0.1738 0.1979 REMARK 3 3 3.1804 - 2.7784 0.95 2594 124 0.1931 0.2272 REMARK 3 4 2.7784 - 2.5244 0.99 2676 151 0.1887 0.2074 REMARK 3 5 2.5244 - 2.3435 0.99 2676 140 0.1823 0.1957 REMARK 3 6 2.3435 - 2.2054 0.99 2649 159 0.1808 0.2093 REMARK 3 7 2.2054 - 2.0949 0.94 2549 131 0.1875 0.2400 REMARK 3 8 2.0949 - 2.0037 0.98 2602 157 0.1943 0.2201 REMARK 3 9 2.0037 - 1.9266 0.98 2640 135 0.2040 0.2271 REMARK 3 10 1.9266 - 1.8601 0.96 2549 124 0.2222 0.2797 REMARK 3 11 1.8601 - 1.8019 0.93 2476 143 0.2288 0.2711 REMARK 3 12 1.8019 - 1.7504 0.87 2306 110 0.2426 0.2756 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.950 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 1979 REMARK 3 ANGLE : 0.976 2690 REMARK 3 CHIRALITY : 0.059 314 REMARK 3 PLANARITY : 0.007 346 REMARK 3 DIHEDRAL : 12.868 1194 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.6159 11.2424 1.0306 REMARK 3 T TENSOR REMARK 3 T11: 0.3734 T22: 0.2789 REMARK 3 T33: 0.4718 T12: -0.0250 REMARK 3 T13: 0.1615 T23: -0.0725 REMARK 3 L TENSOR REMARK 3 L11: 6.8000 L22: 1.5594 REMARK 3 L33: 1.1410 L12: 0.0915 REMARK 3 L13: -0.7587 L23: 0.0175 REMARK 3 S TENSOR REMARK 3 S11: -0.4020 S12: 0.2161 S13: -0.3354 REMARK 3 S21: -0.2108 S22: 0.0813 S23: -0.2351 REMARK 3 S31: 0.2565 S32: 0.0282 S33: 0.3151 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 33 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.6656 12.9366 -6.8868 REMARK 3 T TENSOR REMARK 3 T11: 0.3822 T22: 0.3359 REMARK 3 T33: 0.2949 T12: -0.0508 REMARK 3 T13: 0.0806 T23: -0.1203 REMARK 3 L TENSOR REMARK 3 L11: 5.3410 L22: 5.6236 REMARK 3 L33: 1.4623 L12: 1.4187 REMARK 3 L13: -2.2484 L23: -1.9438 REMARK 3 S TENSOR REMARK 3 S11: -0.1757 S12: 0.6122 S13: -0.4281 REMARK 3 S21: -0.6377 S22: 0.1554 S23: 0.0923 REMARK 3 S31: 0.1046 S32: 0.0110 S33: -0.0088 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 53 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.4353 12.1498 8.7379 REMARK 3 T TENSOR REMARK 3 T11: 0.2697 T22: 0.2333 REMARK 3 T33: 0.3327 T12: -0.0053 REMARK 3 T13: 0.1087 T23: -0.0148 REMARK 3 L TENSOR REMARK 3 L11: 3.0181 L22: 2.7761 REMARK 3 L33: 2.2832 L12: 0.2383 REMARK 3 L13: -0.8686 L23: -0.1299 REMARK 3 S TENSOR REMARK 3 S11: -0.3018 S12: -0.0872 S13: -0.5227 REMARK 3 S21: -0.0095 S22: 0.0181 S23: -0.2654 REMARK 3 S31: 0.2392 S32: 0.0965 S33: 0.2939 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 100 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.5325 15.5013 17.3711 REMARK 3 T TENSOR REMARK 3 T11: 0.2906 T22: 0.3975 REMARK 3 T33: 0.3552 T12: 0.0402 REMARK 3 T13: 0.1245 T23: -0.0065 REMARK 3 L TENSOR REMARK 3 L11: 4.1573 L22: 3.3485 REMARK 3 L33: 3.8851 L12: 0.5707 REMARK 3 L13: -1.4489 L23: -1.4780 REMARK 3 S TENSOR REMARK 3 S11: -0.2233 S12: -0.4210 S13: -0.1785 REMARK 3 S21: 0.3012 S22: 0.3017 S23: 0.3190 REMARK 3 S31: -0.0721 S32: -0.4888 S33: -0.0248 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 139 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.1533 12.4012 23.7443 REMARK 3 T TENSOR REMARK 3 T11: 0.3417 T22: 0.5582 REMARK 3 T33: 0.5044 T12: -0.0143 REMARK 3 T13: 0.1636 T23: -0.0084 REMARK 3 L TENSOR REMARK 3 L11: 9.1598 L22: 2.8202 REMARK 3 L33: 9.3566 L12: -0.4130 REMARK 3 L13: -6.4952 L23: -2.3564 REMARK 3 S TENSOR REMARK 3 S11: 0.0101 S12: -1.4342 S13: 0.0259 REMARK 3 S21: 0.9147 S22: 0.1635 S23: 0.6332 REMARK 3 S31: -0.0725 S32: 0.7553 S33: 0.0220 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 155 THROUGH 207 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.0876 14.6464 9.3509 REMARK 3 T TENSOR REMARK 3 T11: 0.2862 T22: 0.3350 REMARK 3 T33: 0.3377 T12: -0.0186 REMARK 3 T13: 0.0804 T23: -0.0732 REMARK 3 L TENSOR REMARK 3 L11: 5.5636 L22: 1.8303 REMARK 3 L33: 1.9832 L12: 0.8286 REMARK 3 L13: -1.1943 L23: 0.0564 REMARK 3 S TENSOR REMARK 3 S11: -0.0105 S12: 0.2594 S13: -0.4596 REMARK 3 S21: 0.0626 S22: -0.1156 S23: 0.3473 REMARK 3 S31: 0.1023 S32: -0.4998 S33: 0.1060 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 208 THROUGH 235 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.0385 23.8520 -3.8431 REMARK 3 T TENSOR REMARK 3 T11: 0.3712 T22: 0.3169 REMARK 3 T33: 0.2978 T12: -0.0633 REMARK 3 T13: 0.0653 T23: -0.0660 REMARK 3 L TENSOR REMARK 3 L11: 2.2892 L22: 1.5621 REMARK 3 L33: 1.7217 L12: 0.0415 REMARK 3 L13: 0.3984 L23: -0.1287 REMARK 3 S TENSOR REMARK 3 S11: -0.0258 S12: 0.3680 S13: -0.1785 REMARK 3 S21: -0.3316 S22: 0.0364 S23: -0.1092 REMARK 3 S31: -0.0153 S32: 0.1068 S33: 0.0347 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 236 THROUGH 246 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.3796 29.7817 2.5982 REMARK 3 T TENSOR REMARK 3 T11: 0.2925 T22: 0.2361 REMARK 3 T33: 0.2301 T12: -0.0168 REMARK 3 T13: 0.0015 T23: -0.0165 REMARK 3 L TENSOR REMARK 3 L11: 5.6384 L22: 9.1580 REMARK 3 L33: 9.0946 L12: 0.1119 REMARK 3 L13: 3.4851 L23: 1.8936 REMARK 3 S TENSOR REMARK 3 S11: -0.3613 S12: -0.1020 S13: -0.0540 REMARK 3 S21: 0.3176 S22: 0.2225 S23: -0.4617 REMARK 3 S31: -0.2200 S32: -0.1329 S33: 0.0234 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 500 THROUGH 500 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.1157 12.3421 9.8254 REMARK 3 T TENSOR REMARK 3 T11: 0.3766 T22: 0.3550 REMARK 3 T33: 0.3295 T12: -0.0758 REMARK 3 T13: 0.1226 T23: -0.0408 REMARK 3 L TENSOR REMARK 3 L11: 3.8947 L22: 4.6929 REMARK 3 L33: 3.6775 L12: 2.5707 REMARK 3 L13: -1.6232 L23: 0.1399 REMARK 3 S TENSOR REMARK 3 S11: -0.6918 S12: -0.0063 S13: -0.9086 REMARK 3 S21: -0.1588 S22: 0.0570 S23: 0.0469 REMARK 3 S31: 0.5761 S32: 0.4324 S33: 0.6437 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6DET COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-MAY-18. REMARK 100 THE DEPOSITION ID IS D_1000234483. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-DEC-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97953 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 X 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33458 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 81.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.5, 10% (V/V) REMARK 280 ISOPROPANOL, 20% (W/V) PEG4000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y+1/2,-Z REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 52.29300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 65.21800 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 52.29300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 65.21800 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 52.29300 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 65.21800 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 52.29300 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 65.21800 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 628 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 640 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 674 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -13 REMARK 465 GLY A -12 REMARK 465 SER A -11 REMARK 465 ASP A -10 REMARK 465 LYS A -9 REMARK 465 ILE A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 GLU A -1 REMARK 465 ASN A 0 REMARK 465 LEU A 1 REMARK 465 TYR A 2 REMARK 465 PHE A 3 REMARK 465 GLN A 4 REMARK 465 GLY A 5 REMARK 465 LYS A 6 REMARK 465 VAL A 7 REMARK 465 GLU A 8 REMARK 465 TYR A 9 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 34 -47.25 66.14 REMARK 500 SER A 36 93.43 -168.45 REMARK 500 ALA A 86 -143.62 -121.44 REMARK 500 SER A 87 35.74 70.41 REMARK 500 ASN A 190 51.88 -114.12 REMARK 500 PRO A 191 15.14 -66.69 REMARK 500 GLU A 231 4.43 80.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ARG A 500 DBREF 6DET A 6 252 UNP S3MDF0 S3MDF0_9SPIO 26 272 SEQADV 6DET MET A -13 UNP S3MDF0 EXPRESSION TAG SEQADV 6DET GLY A -12 UNP S3MDF0 EXPRESSION TAG SEQADV 6DET SER A -11 UNP S3MDF0 EXPRESSION TAG SEQADV 6DET ASP A -10 UNP S3MDF0 EXPRESSION TAG SEQADV 6DET LYS A -9 UNP S3MDF0 EXPRESSION TAG SEQADV 6DET ILE A -8 UNP S3MDF0 EXPRESSION TAG SEQADV 6DET HIS A -7 UNP S3MDF0 EXPRESSION TAG SEQADV 6DET HIS A -6 UNP S3MDF0 EXPRESSION TAG SEQADV 6DET HIS A -5 UNP S3MDF0 EXPRESSION TAG SEQADV 6DET HIS A -4 UNP S3MDF0 EXPRESSION TAG SEQADV 6DET HIS A -3 UNP S3MDF0 EXPRESSION TAG SEQADV 6DET HIS A -2 UNP S3MDF0 EXPRESSION TAG SEQADV 6DET GLU A -1 UNP S3MDF0 EXPRESSION TAG SEQADV 6DET ASN A 0 UNP S3MDF0 EXPRESSION TAG SEQADV 6DET LEU A 1 UNP S3MDF0 EXPRESSION TAG SEQADV 6DET TYR A 2 UNP S3MDF0 EXPRESSION TAG SEQADV 6DET PHE A 3 UNP S3MDF0 EXPRESSION TAG SEQADV 6DET GLN A 4 UNP S3MDF0 EXPRESSION TAG SEQADV 6DET GLY A 5 UNP S3MDF0 EXPRESSION TAG SEQRES 1 A 266 MET GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS GLU SEQRES 2 A 266 ASN LEU TYR PHE GLN GLY LYS VAL GLU TYR ILE GLU ASP SEQRES 3 A 266 PRO SER TRP SER LYS VAL GLN VAL LYS SER ALA LEU VAL SEQRES 4 A 266 ILE GLY VAL SER ASP PHE VAL PRO ILE LEU SER PHE ARG SEQRES 5 A 266 ASN GLU LYS ASN GLU ILE VAL GLY TYR ASP ILE ASP ILE SEQRES 6 A 266 PHE THR GLU LEU CYS ARG ARG LEU GLY ILE HIS PRO ILE SEQRES 7 A 266 PHE TYR PRO ILE GLN TRP ALA GLN LYS GLU ILE LEU LEU SEQRES 8 A 266 ASN THR GLY VAL ILE ASP CYS ILE ALA SER GLY PHE SER SEQRES 9 A 266 VAL THR GLU GLU ARG LYS GLN HIS TYR ARG MET CYS THR SEQRES 10 A 266 PRO TYR LEU GLN ASN ALA LYS ILE VAL VAL THR LEU ALA SEQRES 11 A 266 GLY ARG GLY TYR GLN THR LEU ALA GLN LEU GLN ASN ARG SEQRES 12 A 266 THR ILE ALA VAL GLU ALA ASP THR ALA GLY ASP GLU ALA SEQRES 13 A 266 LEU LEU ASN VAL GLU ALA LEU LYS ASP HIS VAL ILE ILE SEQRES 14 A 266 LYS ALA MET ALA THR ILE ASP GLN LEU TYR GLU ALA LEU SEQRES 15 A 266 ASP SER GLY THR CYS ASP ALA ILE VAL VAL ASP LEU ILE SEQRES 16 A 266 TYR SER LEU ASP THR LEU ASP LYS ASN PRO GLN TYR SER SEQRES 17 A 266 ILE ILE ASN GLU ALA ILE SER THR GLU TYR TYR THR PHE SEQRES 18 A 266 ALA PHE ARG GLN ALA ASP ALA SER LEU VAL ALA LYS ILE SEQRES 19 A 266 GLU SER VAL LEU ALA GLU MET ASN GLU ASP GLU THR ILE SEQRES 20 A 266 PRO ASN PHE SER ARG LYS TRP PHE GLY SER ASN LEU SER SEQRES 21 A 266 ILE LEU ASN VAL ARG PHE HET ARG A 500 24 HETNAM ARG ARGININE FORMUL 2 ARG C6 H15 N4 O2 1+ FORMUL 3 HOH *100(H2 O) HELIX 1 AA1 PRO A 13 SER A 22 1 10 HELIX 2 AA2 GLY A 46 GLY A 60 1 15 HELIX 3 AA3 GLN A 69 ALA A 71 5 3 HELIX 4 AA4 GLN A 72 THR A 79 1 8 HELIX 5 AA5 GLU A 93 HIS A 98 5 6 HELIX 6 AA6 GLY A 117 GLY A 119 5 3 HELIX 7 AA7 THR A 122 GLN A 127 5 6 HELIX 8 AA8 ALA A 138 ASN A 145 1 8 HELIX 9 AA9 THR A 160 GLY A 171 1 12 HELIX 10 AB1 LEU A 180 LEU A 184 1 5 HELIX 11 AB2 ASP A 185 ASN A 190 1 6 HELIX 12 AB3 ASP A 213 ASP A 230 1 18 HELIX 13 AB4 GLU A 231 GLY A 242 1 12 SHEET 1 AA1 8 HIS A 62 PRO A 67 0 SHEET 2 AA1 8 ALA A 23 VAL A 28 1 N ILE A 26 O ILE A 64 SHEET 3 AA1 8 CYS A 84 SER A 90 1 O CYS A 84 N GLY A 27 SHEET 4 AA1 8 SER A 201 PHE A 209 -1 O THR A 206 N PHE A 89 SHEET 5 AA1 8 LEU A 106 LEU A 115 -1 N ASN A 108 O GLU A 203 SHEET 6 AA1 8 ALA A 175 ASP A 179 -1 O ILE A 176 N VAL A 113 SHEET 7 AA1 8 ARG A 129 GLU A 134 1 N ALA A 132 O ALA A 175 SHEET 8 AA1 8 VAL A 153 MET A 158 1 O ILE A 154 N ILE A 131 SHEET 1 AA2 4 ARG A 100 MET A 101 0 SHEET 2 AA2 4 SER A 201 PHE A 209 -1 O PHE A 209 N ARG A 100 SHEET 3 AA2 4 LEU A 106 LEU A 115 -1 N ASN A 108 O GLU A 203 SHEET 4 AA2 4 TYR A 193 ILE A 195 -1 O SER A 194 N THR A 114 SHEET 1 AA3 2 PHE A 37 ARG A 38 0 SHEET 2 AA3 2 ILE A 44 VAL A 45 -1 O VAL A 45 N PHE A 37 SITE 1 AC1 13 SER A 29 VAL A 32 TRP A 70 SER A 87 SITE 2 AC1 13 GLY A 88 PHE A 89 SER A 90 ARG A 95 SITE 3 AC1 13 GLU A 134 ASP A 136 THR A 137 ASP A 179 SITE 4 AC1 13 HOH A 608 CRYST1 104.586 130.436 48.991 90.00 90.00 90.00 C 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009562 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007667 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020412 0.00000