data_6DG0 # _entry.id 6DG0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.313 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6DG0 WWPDB D_1000233189 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6DG0 _pdbx_database_status.recvd_initial_deposition_date 2018-05-16 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Mackereth, C.D.' 1 0000-0002-0776-7947 'Soufari, H.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structure of MEC-8 RRM2 in complex with AGCACA' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Soufari, H.' 1 ? primary 'Mackereth, C.D.' 2 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 122.40 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6DG0 _cell.details ? _cell.formula_units_Z ? _cell.length_a 72.075 _cell.length_a_esd ? _cell.length_b 68.714 _cell.length_b_esd ? _cell.length_c 57.531 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6DG0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Mec-8 protein' 9582.746 2 ? C227A,C266A ? ? 2 polymer syn ;DNA (5'-D(*AP*GP*CP*AP*CP*A)-3') ; 1802.233 2 ? ? ? ? 3 water nat water 18.015 102 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;SAASTLFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGSAVAFVEYSDLQKATQAMISLQGFQITANDRGGLRIEYAR NKMADVNG ; ;SAASTLFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGSAVAFVEYSDLQKATQAMISLQGFQITANDRGGLRIEYAR NKMADVNG ; A,B ? 2 polydeoxyribonucleotide no no '(DA)(DG)(DC)(DA)(DC)(DA)' AGCACA C,D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ALA n 1 3 ALA n 1 4 SER n 1 5 THR n 1 6 LEU n 1 7 PHE n 1 8 VAL n 1 9 ALA n 1 10 ASN n 1 11 LEU n 1 12 SER n 1 13 ALA n 1 14 GLU n 1 15 VAL n 1 16 ASN n 1 17 GLU n 1 18 ASP n 1 19 THR n 1 20 LEU n 1 21 ARG n 1 22 GLY n 1 23 VAL n 1 24 PHE n 1 25 LYS n 1 26 ALA n 1 27 PHE n 1 28 SER n 1 29 GLY n 1 30 PHE n 1 31 THR n 1 32 ARG n 1 33 LEU n 1 34 ARG n 1 35 LEU n 1 36 HIS n 1 37 ASN n 1 38 LYS n 1 39 ASN n 1 40 GLY n 1 41 SER n 1 42 ALA n 1 43 VAL n 1 44 ALA n 1 45 PHE n 1 46 VAL n 1 47 GLU n 1 48 TYR n 1 49 SER n 1 50 ASP n 1 51 LEU n 1 52 GLN n 1 53 LYS n 1 54 ALA n 1 55 THR n 1 56 GLN n 1 57 ALA n 1 58 MET n 1 59 ILE n 1 60 SER n 1 61 LEU n 1 62 GLN n 1 63 GLY n 1 64 PHE n 1 65 GLN n 1 66 ILE n 1 67 THR n 1 68 ALA n 1 69 ASN n 1 70 ASP n 1 71 ARG n 1 72 GLY n 1 73 GLY n 1 74 LEU n 1 75 ARG n 1 76 ILE n 1 77 GLU n 1 78 TYR n 1 79 ALA n 1 80 ARG n 1 81 ASN n 1 82 LYS n 1 83 MET n 1 84 ALA n 1 85 ASP n 1 86 VAL n 1 87 ASN n 1 88 GLY n 2 1 DA n 2 2 DG n 2 3 DC n 2 4 DA n 2 5 DC n 2 6 DA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 88 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene mec-8 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Caenorhabditis elegans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 6239 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant pLysY _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-GB1a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 6 _pdbx_entity_src_syn.organism_scientific 'Caenorhabditis elegans' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 6239 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP Q22039_CAEEL Q22039 ? 1 ;CSTLFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLQKATQAMISLQGFQITANDRGGLRIEYARNK MADVNG ; 227 2 PDB 6DG0 6DG0 ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6DG0 A 3 ? 88 ? Q22039 227 ? 312 ? 20 105 2 1 6DG0 B 3 ? 88 ? Q22039 227 ? 312 ? 20 105 3 2 6DG0 C 1 ? 6 ? 6DG0 0 ? 5 ? 0 5 4 2 6DG0 D 1 ? 6 ? 6DG0 0 ? 5 ? 0 5 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6DG0 SER A 1 ? UNP Q22039 ? ? 'expression tag' 18 1 1 6DG0 ALA A 2 ? UNP Q22039 ? ? 'expression tag' 19 2 1 6DG0 ALA A 3 ? UNP Q22039 CYS 227 'engineered mutation' 20 3 1 6DG0 ALA A 42 ? UNP Q22039 CYS 266 'engineered mutation' 59 4 2 6DG0 SER B 1 ? UNP Q22039 ? ? 'expression tag' 18 5 2 6DG0 ALA B 2 ? UNP Q22039 ? ? 'expression tag' 19 6 2 6DG0 ALA B 3 ? UNP Q22039 CYS 227 'engineered mutation' 20 7 2 6DG0 ALA B 42 ? UNP Q22039 CYS 266 'engineered mutation' 59 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6DG0 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.73 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 54.98 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '1mM MES ph6.5, PEG 8000 25%' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 200K' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-01-01 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU FR-X' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate 31.75 _reflns.entry_id 6DG0 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.457 _reflns.d_resolution_low 28.082 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 8221 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 94.1 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 1.8 _reflns.pdbx_Rmerge_I_obs 0.05359 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 9.64 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.07579 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.996 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.457 _reflns_shell.d_res_low 2.544 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.56 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 658 _reflns_shell.percent_possible_all 76.33 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.2121 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 1.4 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.932 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6DG0 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.457 _refine.ls_d_res_low 28.082 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 8221 _refine.ls_number_reflns_R_free 413 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 94.16 _refine.ls_percent_reflns_R_free 5.02 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2376 _refine.ls_R_factor_R_free 0.2871 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2350 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1URN _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 31.51 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.37 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1278 _refine_hist.pdbx_number_atoms_nucleic_acid 240 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 102 _refine_hist.number_atoms_total 1620 _refine_hist.d_res_high 2.457 _refine_hist.d_res_low 28.082 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.003 ? 1571 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.779 ? 2161 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 17.758 ? 573 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.032 ? 244 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.002 ? 243 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.4567 2.8119 . . 133 2426 89.00 . . . 0.3764 . 0.2913 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8119 3.5415 . . 141 2732 99.00 . . . 0.3519 . 0.2615 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.5415 28.0835 . . 139 2650 95.00 . . . 0.2284 . 0.2024 . . . . . . . . . . # _struct.entry_id 6DG0 _struct.title 'MEC-8 C-terminal RRM domain bound to AGCACA' _struct.pdbx_descriptor 'Mec-8 protein/DNA Complex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6DG0 _struct_keywords.text 'RNA recognition motif, splicing factor, RNA-binding, RNA BINDING PROTEIN, RNA BINDING PROTEIN-DNA complex' _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 16 ? LYS A 25 ? ASN A 33 LYS A 42 1 ? 10 HELX_P HELX_P2 AA2 ASP A 50 ? GLN A 62 ? ASP A 67 GLN A 79 1 ? 13 HELX_P HELX_P3 AA3 ASN B 16 ? LYS B 25 ? ASN B 33 LYS B 42 1 ? 10 HELX_P HELX_P4 AA4 ASP B 50 ? GLN B 62 ? ASP B 67 GLN B 79 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PHE A 30 ? ASN A 37 ? PHE A 47 ASN A 54 AA1 2 ALA A 42 ? TYR A 48 ? ALA A 59 TYR A 65 AA1 3 SER A 4 ? LEU A 11 ? SER A 21 LEU A 28 AA1 4 ARG A 75 ? TYR A 78 ? ARG A 92 TYR A 95 AA2 1 PHE B 30 ? ASN B 37 ? PHE B 47 ASN B 54 AA2 2 ALA B 42 ? TYR B 48 ? ALA B 59 TYR B 65 AA2 3 SER B 4 ? LEU B 11 ? SER B 21 LEU B 28 AA2 4 ARG B 75 ? TYR B 78 ? ARG B 92 TYR B 95 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ARG A 32 ? N ARG A 49 O GLU A 47 ? O GLU A 64 AA1 2 3 O VAL A 46 ? O VAL A 63 N LEU A 6 ? N LEU A 23 AA1 3 4 N PHE A 7 ? N PHE A 24 O GLU A 77 ? O GLU A 94 AA2 1 2 N ARG B 32 ? N ARG B 49 O GLU B 47 ? O GLU B 64 AA2 2 3 O VAL B 46 ? O VAL B 63 N LEU B 6 ? N LEU B 23 AA2 3 4 N PHE B 7 ? N PHE B 24 O GLU B 77 ? O GLU B 94 # _atom_sites.entry_id 6DG0 _atom_sites.fract_transf_matrix[1][1] 0.013874 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.008804 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014553 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020586 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 18 ? ? ? A . n A 1 2 ALA 2 19 19 ALA ALA A . n A 1 3 ALA 3 20 20 ALA ALA A . n A 1 4 SER 4 21 21 SER SER A . n A 1 5 THR 5 22 22 THR THR A . n A 1 6 LEU 6 23 23 LEU LEU A . n A 1 7 PHE 7 24 24 PHE PHE A . n A 1 8 VAL 8 25 25 VAL VAL A . n A 1 9 ALA 9 26 26 ALA ALA A . n A 1 10 ASN 10 27 27 ASN ASN A . n A 1 11 LEU 11 28 28 LEU LEU A . n A 1 12 SER 12 29 29 SER SER A . n A 1 13 ALA 13 30 30 ALA ALA A . n A 1 14 GLU 14 31 31 GLU GLU A . n A 1 15 VAL 15 32 32 VAL VAL A . n A 1 16 ASN 16 33 33 ASN ASN A . n A 1 17 GLU 17 34 34 GLU GLU A . n A 1 18 ASP 18 35 35 ASP ASP A . n A 1 19 THR 19 36 36 THR THR A . n A 1 20 LEU 20 37 37 LEU LEU A . n A 1 21 ARG 21 38 38 ARG ARG A . n A 1 22 GLY 22 39 39 GLY GLY A . n A 1 23 VAL 23 40 40 VAL VAL A . n A 1 24 PHE 24 41 41 PHE PHE A . n A 1 25 LYS 25 42 42 LYS LYS A . n A 1 26 ALA 26 43 43 ALA ALA A . n A 1 27 PHE 27 44 44 PHE PHE A . n A 1 28 SER 28 45 45 SER SER A . n A 1 29 GLY 29 46 46 GLY GLY A . n A 1 30 PHE 30 47 47 PHE PHE A . n A 1 31 THR 31 48 48 THR THR A . n A 1 32 ARG 32 49 49 ARG ARG A . n A 1 33 LEU 33 50 50 LEU LEU A . n A 1 34 ARG 34 51 51 ARG ARG A . n A 1 35 LEU 35 52 52 LEU LEU A . n A 1 36 HIS 36 53 53 HIS HIS A . n A 1 37 ASN 37 54 54 ASN ASN A . n A 1 38 LYS 38 55 55 LYS LYS A . n A 1 39 ASN 39 56 56 ASN ASN A . n A 1 40 GLY 40 57 57 GLY GLY A . n A 1 41 SER 41 58 58 SER SER A . n A 1 42 ALA 42 59 59 ALA ALA A . n A 1 43 VAL 43 60 60 VAL VAL A . n A 1 44 ALA 44 61 61 ALA ALA A . n A 1 45 PHE 45 62 62 PHE PHE A . n A 1 46 VAL 46 63 63 VAL VAL A . n A 1 47 GLU 47 64 64 GLU GLU A . n A 1 48 TYR 48 65 65 TYR TYR A . n A 1 49 SER 49 66 66 SER SER A . n A 1 50 ASP 50 67 67 ASP ASP A . n A 1 51 LEU 51 68 68 LEU LEU A . n A 1 52 GLN 52 69 69 GLN GLN A . n A 1 53 LYS 53 70 70 LYS LYS A . n A 1 54 ALA 54 71 71 ALA ALA A . n A 1 55 THR 55 72 72 THR THR A . n A 1 56 GLN 56 73 73 GLN GLN A . n A 1 57 ALA 57 74 74 ALA ALA A . n A 1 58 MET 58 75 75 MET MET A . n A 1 59 ILE 59 76 76 ILE ILE A . n A 1 60 SER 60 77 77 SER SER A . n A 1 61 LEU 61 78 78 LEU LEU A . n A 1 62 GLN 62 79 79 GLN GLN A . n A 1 63 GLY 63 80 80 GLY GLY A . n A 1 64 PHE 64 81 81 PHE PHE A . n A 1 65 GLN 65 82 82 GLN GLN A . n A 1 66 ILE 66 83 ? ? ? A . n A 1 67 THR 67 84 84 THR THR A . n A 1 68 ALA 68 85 85 ALA ALA A . n A 1 69 ASN 69 86 86 ASN ASN A . n A 1 70 ASP 70 87 87 ASP ASP A . n A 1 71 ARG 71 88 88 ARG ARG A . n A 1 72 GLY 72 89 89 GLY GLY A . n A 1 73 GLY 73 90 90 GLY GLY A . n A 1 74 LEU 74 91 91 LEU LEU A . n A 1 75 ARG 75 92 92 ARG ARG A . n A 1 76 ILE 76 93 93 ILE ILE A . n A 1 77 GLU 77 94 94 GLU GLU A . n A 1 78 TYR 78 95 95 TYR TYR A . n A 1 79 ALA 79 96 96 ALA ALA A . n A 1 80 ARG 80 97 97 ARG ARG A . n A 1 81 ASN 81 98 98 ASN ASN A . n A 1 82 LYS 82 99 99 LYS LYS A . n A 1 83 MET 83 100 100 MET MET A . n A 1 84 ALA 84 101 101 ALA ALA A . n A 1 85 ASP 85 102 102 ASP ASP A . n A 1 86 VAL 86 103 103 VAL VAL A . n A 1 87 ASN 87 104 ? ? ? A . n A 1 88 GLY 88 105 ? ? ? A . n B 1 1 SER 1 18 18 SER SER B . n B 1 2 ALA 2 19 19 ALA ALA B . n B 1 3 ALA 3 20 20 ALA ALA B . n B 1 4 SER 4 21 21 SER SER B . n B 1 5 THR 5 22 22 THR THR B . n B 1 6 LEU 6 23 23 LEU LEU B . n B 1 7 PHE 7 24 24 PHE PHE B . n B 1 8 VAL 8 25 25 VAL VAL B . n B 1 9 ALA 9 26 26 ALA ALA B . n B 1 10 ASN 10 27 27 ASN ASN B . n B 1 11 LEU 11 28 28 LEU LEU B . n B 1 12 SER 12 29 29 SER SER B . n B 1 13 ALA 13 30 30 ALA ALA B . n B 1 14 GLU 14 31 31 GLU GLU B . n B 1 15 VAL 15 32 32 VAL VAL B . n B 1 16 ASN 16 33 33 ASN ASN B . n B 1 17 GLU 17 34 34 GLU GLU B . n B 1 18 ASP 18 35 35 ASP ASP B . n B 1 19 THR 19 36 36 THR THR B . n B 1 20 LEU 20 37 37 LEU LEU B . n B 1 21 ARG 21 38 38 ARG ARG B . n B 1 22 GLY 22 39 39 GLY GLY B . n B 1 23 VAL 23 40 40 VAL VAL B . n B 1 24 PHE 24 41 41 PHE PHE B . n B 1 25 LYS 25 42 42 LYS LYS B . n B 1 26 ALA 26 43 43 ALA ALA B . n B 1 27 PHE 27 44 44 PHE PHE B . n B 1 28 SER 28 45 45 SER SER B . n B 1 29 GLY 29 46 46 GLY GLY B . n B 1 30 PHE 30 47 47 PHE PHE B . n B 1 31 THR 31 48 48 THR THR B . n B 1 32 ARG 32 49 49 ARG ARG B . n B 1 33 LEU 33 50 50 LEU LEU B . n B 1 34 ARG 34 51 51 ARG ARG B . n B 1 35 LEU 35 52 52 LEU LEU B . n B 1 36 HIS 36 53 53 HIS HIS B . n B 1 37 ASN 37 54 54 ASN ASN B . n B 1 38 LYS 38 55 55 LYS LYS B . n B 1 39 ASN 39 56 56 ASN ASN B . n B 1 40 GLY 40 57 57 GLY GLY B . n B 1 41 SER 41 58 58 SER SER B . n B 1 42 ALA 42 59 59 ALA ALA B . n B 1 43 VAL 43 60 60 VAL VAL B . n B 1 44 ALA 44 61 61 ALA ALA B . n B 1 45 PHE 45 62 62 PHE PHE B . n B 1 46 VAL 46 63 63 VAL VAL B . n B 1 47 GLU 47 64 64 GLU GLU B . n B 1 48 TYR 48 65 65 TYR TYR B . n B 1 49 SER 49 66 66 SER SER B . n B 1 50 ASP 50 67 67 ASP ASP B . n B 1 51 LEU 51 68 68 LEU LEU B . n B 1 52 GLN 52 69 69 GLN GLN B . n B 1 53 LYS 53 70 70 LYS LYS B . n B 1 54 ALA 54 71 71 ALA ALA B . n B 1 55 THR 55 72 72 THR THR B . n B 1 56 GLN 56 73 73 GLN GLN B . n B 1 57 ALA 57 74 74 ALA ALA B . n B 1 58 MET 58 75 75 MET MET B . n B 1 59 ILE 59 76 76 ILE ILE B . n B 1 60 SER 60 77 77 SER SER B . n B 1 61 LEU 61 78 78 LEU LEU B . n B 1 62 GLN 62 79 79 GLN GLN B . n B 1 63 GLY 63 80 80 GLY GLY B . n B 1 64 PHE 64 81 81 PHE PHE B . n B 1 65 GLN 65 82 82 GLN GLN B . n B 1 66 ILE 66 83 ? ? ? B . n B 1 67 THR 67 84 84 THR THR B . n B 1 68 ALA 68 85 85 ALA ALA B . n B 1 69 ASN 69 86 86 ASN ASN B . n B 1 70 ASP 70 87 87 ASP ASP B . n B 1 71 ARG 71 88 88 ARG ARG B . n B 1 72 GLY 72 89 89 GLY GLY B . n B 1 73 GLY 73 90 90 GLY GLY B . n B 1 74 LEU 74 91 91 LEU LEU B . n B 1 75 ARG 75 92 92 ARG ARG B . n B 1 76 ILE 76 93 93 ILE ILE B . n B 1 77 GLU 77 94 94 GLU GLU B . n B 1 78 TYR 78 95 95 TYR TYR B . n B 1 79 ALA 79 96 96 ALA ALA B . n B 1 80 ARG 80 97 97 ARG ARG B . n B 1 81 ASN 81 98 98 ASN ASN B . n B 1 82 LYS 82 99 99 LYS LYS B . n B 1 83 MET 83 100 100 MET MET B . n B 1 84 ALA 84 101 101 ALA ALA B . n B 1 85 ASP 85 102 102 ASP ASP B . n B 1 86 VAL 86 103 ? ? ? B . n B 1 87 ASN 87 104 ? ? ? B . n B 1 88 GLY 88 105 ? ? ? B . n C 2 1 DA 1 0 0 DA DA C . n C 2 2 DG 2 1 1 DG DG C . n C 2 3 DC 3 2 2 DC DC C . n C 2 4 DA 4 3 3 DA DA C . n C 2 5 DC 5 4 4 DC DC C . n C 2 6 DA 6 5 5 DA DA C . n D 2 1 DA 1 0 0 DA DA D . n D 2 2 DG 2 1 1 DG DG D . n D 2 3 DC 3 2 2 DC DC D . n D 2 4 DA 4 3 3 DA DA D . n D 2 5 DC 5 4 4 DC DC D . n D 2 6 DA 6 5 5 DA DA D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HOH 1 201 32 HOH HOH A . E 3 HOH 2 202 100 HOH HOH A . E 3 HOH 3 203 109 HOH HOH A . E 3 HOH 4 204 85 HOH HOH A . E 3 HOH 5 205 60 HOH HOH A . E 3 HOH 6 206 2 HOH HOH A . E 3 HOH 7 207 94 HOH HOH A . E 3 HOH 8 208 16 HOH HOH A . E 3 HOH 9 209 17 HOH HOH A . E 3 HOH 10 210 37 HOH HOH A . E 3 HOH 11 211 10 HOH HOH A . E 3 HOH 12 212 13 HOH HOH A . E 3 HOH 13 213 79 HOH HOH A . E 3 HOH 14 214 26 HOH HOH A . E 3 HOH 15 215 61 HOH HOH A . E 3 HOH 16 216 66 HOH HOH A . E 3 HOH 17 217 103 HOH HOH A . E 3 HOH 18 218 22 HOH HOH A . E 3 HOH 19 219 31 HOH HOH A . E 3 HOH 20 220 89 HOH HOH A . E 3 HOH 21 221 70 HOH HOH A . E 3 HOH 22 222 36 HOH HOH A . E 3 HOH 23 223 28 HOH HOH A . E 3 HOH 24 224 80 HOH HOH A . E 3 HOH 25 225 119 HOH HOH A . E 3 HOH 26 226 81 HOH HOH A . E 3 HOH 27 227 58 HOH HOH A . E 3 HOH 28 228 49 HOH HOH A . E 3 HOH 29 229 86 HOH HOH A . E 3 HOH 30 230 84 HOH HOH A . E 3 HOH 31 231 12 HOH HOH A . E 3 HOH 32 232 14 HOH HOH A . E 3 HOH 33 233 40 HOH HOH A . E 3 HOH 34 234 77 HOH HOH A . E 3 HOH 35 235 20 HOH HOH A . E 3 HOH 36 236 56 HOH HOH A . E 3 HOH 37 237 90 HOH HOH A . E 3 HOH 38 238 101 HOH HOH A . E 3 HOH 39 239 30 HOH HOH A . E 3 HOH 40 240 50 HOH HOH A . E 3 HOH 41 241 24 HOH HOH A . E 3 HOH 42 242 48 HOH HOH A . E 3 HOH 43 243 25 HOH HOH A . E 3 HOH 44 244 82 HOH HOH A . F 3 HOH 1 201 9 HOH HOH B . F 3 HOH 2 202 34 HOH HOH B . F 3 HOH 3 203 111 HOH HOH B . F 3 HOH 4 204 93 HOH HOH B . F 3 HOH 5 205 4 HOH HOH B . F 3 HOH 6 206 11 HOH HOH B . F 3 HOH 7 207 39 HOH HOH B . F 3 HOH 8 208 33 HOH HOH B . F 3 HOH 9 209 41 HOH HOH B . F 3 HOH 10 210 88 HOH HOH B . F 3 HOH 11 211 15 HOH HOH B . F 3 HOH 12 212 6 HOH HOH B . F 3 HOH 13 213 1 HOH HOH B . F 3 HOH 14 214 59 HOH HOH B . F 3 HOH 15 215 72 HOH HOH B . F 3 HOH 16 216 107 HOH HOH B . F 3 HOH 17 217 19 HOH HOH B . F 3 HOH 18 218 63 HOH HOH B . F 3 HOH 19 219 5 HOH HOH B . F 3 HOH 20 220 47 HOH HOH B . F 3 HOH 21 221 83 HOH HOH B . F 3 HOH 22 222 115 HOH HOH B . F 3 HOH 23 223 8 HOH HOH B . F 3 HOH 24 224 112 HOH HOH B . F 3 HOH 25 225 95 HOH HOH B . F 3 HOH 26 226 67 HOH HOH B . F 3 HOH 27 227 69 HOH HOH B . F 3 HOH 28 228 18 HOH HOH B . F 3 HOH 29 229 42 HOH HOH B . F 3 HOH 30 230 44 HOH HOH B . F 3 HOH 31 231 87 HOH HOH B . F 3 HOH 32 232 64 HOH HOH B . F 3 HOH 33 233 117 HOH HOH B . F 3 HOH 34 234 116 HOH HOH B . F 3 HOH 35 235 92 HOH HOH B . F 3 HOH 36 236 52 HOH HOH B . F 3 HOH 37 237 110 HOH HOH B . F 3 HOH 38 238 106 HOH HOH B . F 3 HOH 39 239 105 HOH HOH B . F 3 HOH 40 240 68 HOH HOH B . F 3 HOH 41 241 114 HOH HOH B . F 3 HOH 42 242 45 HOH HOH B . F 3 HOH 43 243 108 HOH HOH B . F 3 HOH 44 244 76 HOH HOH B . G 3 HOH 1 101 53 HOH HOH C . G 3 HOH 2 102 43 HOH HOH C . G 3 HOH 3 103 96 HOH HOH C . G 3 HOH 4 104 97 HOH HOH C . G 3 HOH 5 105 21 HOH HOH C . G 3 HOH 6 106 104 HOH HOH C . G 3 HOH 7 107 75 HOH HOH C . G 3 HOH 8 108 57 HOH HOH C . H 3 HOH 1 101 113 HOH HOH D . H 3 HOH 2 102 78 HOH HOH D . H 3 HOH 3 103 71 HOH HOH D . H 3 HOH 4 104 51 HOH HOH D . H 3 HOH 5 105 23 HOH HOH D . H 3 HOH 6 106 35 HOH HOH D . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 author_defined_assembly ? dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,D,E,H 2 1 B,C,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 213 ? E HOH . 2 1 B HOH 217 ? F HOH . 3 1 B HOH 225 ? F HOH . 4 1 B HOH 238 ? F HOH . 5 1 B HOH 241 ? F HOH . # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2019-08-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1692 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 ND2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASN _pdbx_validate_close_contact.auth_seq_id_1 27 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 GLY _pdbx_validate_close_contact.auth_seq_id_2 90 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.15 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 55 ? ? -124.22 -108.92 2 1 ASN A 86 ? ? -104.06 -62.67 3 1 ALA B 19 ? ? -100.99 57.81 4 1 LYS B 55 ? ? -124.74 -121.48 5 1 ALA B 85 ? ? -106.19 -89.47 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 55 ? CG ? A LYS 38 CG 2 1 Y 1 A LYS 55 ? CD ? A LYS 38 CD 3 1 Y 1 A LYS 55 ? CE ? A LYS 38 CE 4 1 Y 1 A LYS 55 ? NZ ? A LYS 38 NZ 5 1 Y 1 A ASN 56 ? CG ? A ASN 39 CG 6 1 Y 1 A ASN 56 ? OD1 ? A ASN 39 OD1 7 1 Y 1 A ASN 56 ? ND2 ? A ASN 39 ND2 8 1 Y 1 B GLU 31 ? CG ? B GLU 14 CG 9 1 Y 1 B GLU 31 ? CD ? B GLU 14 CD 10 1 Y 1 B GLU 31 ? OE1 ? B GLU 14 OE1 11 1 Y 1 B GLU 31 ? OE2 ? B GLU 14 OE2 12 1 Y 1 B LYS 55 ? CG ? B LYS 38 CG 13 1 Y 1 B LYS 55 ? CD ? B LYS 38 CD 14 1 Y 1 B LYS 55 ? CE ? B LYS 38 CE 15 1 Y 1 B LYS 55 ? NZ ? B LYS 38 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 18 ? A SER 1 2 1 Y 1 A ILE 83 ? A ILE 66 3 1 Y 1 A ASN 104 ? A ASN 87 4 1 Y 1 A GLY 105 ? A GLY 88 5 1 Y 1 B ILE 83 ? B ILE 66 6 1 Y 1 B VAL 103 ? B VAL 86 7 1 Y 1 B ASN 104 ? B ASN 87 8 1 Y 1 B GLY 105 ? B GLY 88 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #