data_6DI7 # _entry.id 6DI7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6DI7 pdb_00006di7 10.2210/pdb6di7/pdb WWPDB D_1000234670 ? ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details . _pdbx_database_related.db_id EMD-7874 _pdbx_database_related.content_type 'other EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6DI7 _pdbx_database_status.recvd_initial_deposition_date 2018-05-22 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Varlakhanova, N.V.' 1 0000-0002-9776-4423 'Brady, T.M.' 2 ? 'Ford, M.G.J.' 3 0000-0002-9115-4413 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J. Cell Biol.' _citation.journal_id_ASTM JCLBA3 _citation.journal_id_CSD 2019 _citation.journal_id_ISSN 1540-8140 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 217 _citation.language ? _citation.page_first 3608 _citation.page_last 3624 _citation.title 'Structures of the fungal dynamin-related protein Vps1 reveal a unique, open helical architecture.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1083/jcb.201712021 _citation.pdbx_database_id_PubMed 30087125 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Varlakhanova, N.V.' 1 ? primary 'Alvarez, F.J.D.' 2 ? primary 'Brady, T.M.' 3 ? primary 'Tornabene, B.A.' 4 ? primary 'Hosford, C.J.' 5 ? primary 'Chappie, J.S.' 6 ? primary 'Zhang, P.' 7 ? primary 'Ford, M.G.J.' 8 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 6DI7 _cell.details ? _cell.formula_units_Z ? _cell.length_a 84.979 _cell.length_a_esd ? _cell.length_b 84.979 _cell.length_b_esd ? _cell.length_c 271.502 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 18 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6DI7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative sorting protein' 42381.285 1 ? ? 'UNP residues 1-358' ? 2 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 water nat water 18.015 86 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name Vps1 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSSHHHHHHSSGLVPRGSHMTADAPAGTLAQPGGISDPNLIKLVNKLQDVFTTVGVNNPIDLPQIVVVGSQSSGKSSVL ENIVGRDFLPRGQGIVTRRPLVLQLINRQSSGNANGFDERLADSTDKAANLDEWGEFLHLPGQKFYDFNKIRDEINRETE AKVGRNAGISPAPINLRIYSPHVLNLTLVDLPGLTRVPVGDQPRDIERQIRDMILKYIQKPNAIILAVTAANVDLANSDG LKLAREVDPEGQRTIGVLTKVDLMDEGTDVVDILAGRIIPLRLGYVPVVNRGQRDIDNKKPITAALEAEKAFFENHKAYR NKSAYCGTPYLARKLNLILMMHIKQTLPDIKQRISSSLQKYQQELEALGPSLLGNSANAGLEVLFQ ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSHMTADAPAGTLAQPGGISDPNLIKLVNKLQDVFTTVGVNNPIDLPQIVVVGSQSSGKSSVL ENIVGRDFLPRGQGIVTRRPLVLQLINRQSSGNANGFDERLADSTDKAANLDEWGEFLHLPGQKFYDFNKIRDEINRETE AKVGRNAGISPAPINLRIYSPHVLNLTLVDLPGLTRVPVGDQPRDIERQIRDMILKYIQKPNAIILAVTAANVDLANSDG LKLAREVDPEGQRTIGVLTKVDLMDEGTDVVDILAGRIIPLRLGYVPVVNRGQRDIDNKKPITAALEAEKAFFENHKAYR NKSAYCGTPYLARKLNLILMMHIKQTLPDIKQRISSSLQKYQQELEALGPSLLGNSANAGLEVLFQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MET n 1 22 THR n 1 23 ALA n 1 24 ASP n 1 25 ALA n 1 26 PRO n 1 27 ALA n 1 28 GLY n 1 29 THR n 1 30 LEU n 1 31 ALA n 1 32 GLN n 1 33 PRO n 1 34 GLY n 1 35 GLY n 1 36 ILE n 1 37 SER n 1 38 ASP n 1 39 PRO n 1 40 ASN n 1 41 LEU n 1 42 ILE n 1 43 LYS n 1 44 LEU n 1 45 VAL n 1 46 ASN n 1 47 LYS n 1 48 LEU n 1 49 GLN n 1 50 ASP n 1 51 VAL n 1 52 PHE n 1 53 THR n 1 54 THR n 1 55 VAL n 1 56 GLY n 1 57 VAL n 1 58 ASN n 1 59 ASN n 1 60 PRO n 1 61 ILE n 1 62 ASP n 1 63 LEU n 1 64 PRO n 1 65 GLN n 1 66 ILE n 1 67 VAL n 1 68 VAL n 1 69 VAL n 1 70 GLY n 1 71 SER n 1 72 GLN n 1 73 SER n 1 74 SER n 1 75 GLY n 1 76 LYS n 1 77 SER n 1 78 SER n 1 79 VAL n 1 80 LEU n 1 81 GLU n 1 82 ASN n 1 83 ILE n 1 84 VAL n 1 85 GLY n 1 86 ARG n 1 87 ASP n 1 88 PHE n 1 89 LEU n 1 90 PRO n 1 91 ARG n 1 92 GLY n 1 93 GLN n 1 94 GLY n 1 95 ILE n 1 96 VAL n 1 97 THR n 1 98 ARG n 1 99 ARG n 1 100 PRO n 1 101 LEU n 1 102 VAL n 1 103 LEU n 1 104 GLN n 1 105 LEU n 1 106 ILE n 1 107 ASN n 1 108 ARG n 1 109 GLN n 1 110 SER n 1 111 SER n 1 112 GLY n 1 113 ASN n 1 114 ALA n 1 115 ASN n 1 116 GLY n 1 117 PHE n 1 118 ASP n 1 119 GLU n 1 120 ARG n 1 121 LEU n 1 122 ALA n 1 123 ASP n 1 124 SER n 1 125 THR n 1 126 ASP n 1 127 LYS n 1 128 ALA n 1 129 ALA n 1 130 ASN n 1 131 LEU n 1 132 ASP n 1 133 GLU n 1 134 TRP n 1 135 GLY n 1 136 GLU n 1 137 PHE n 1 138 LEU n 1 139 HIS n 1 140 LEU n 1 141 PRO n 1 142 GLY n 1 143 GLN n 1 144 LYS n 1 145 PHE n 1 146 TYR n 1 147 ASP n 1 148 PHE n 1 149 ASN n 1 150 LYS n 1 151 ILE n 1 152 ARG n 1 153 ASP n 1 154 GLU n 1 155 ILE n 1 156 ASN n 1 157 ARG n 1 158 GLU n 1 159 THR n 1 160 GLU n 1 161 ALA n 1 162 LYS n 1 163 VAL n 1 164 GLY n 1 165 ARG n 1 166 ASN n 1 167 ALA n 1 168 GLY n 1 169 ILE n 1 170 SER n 1 171 PRO n 1 172 ALA n 1 173 PRO n 1 174 ILE n 1 175 ASN n 1 176 LEU n 1 177 ARG n 1 178 ILE n 1 179 TYR n 1 180 SER n 1 181 PRO n 1 182 HIS n 1 183 VAL n 1 184 LEU n 1 185 ASN n 1 186 LEU n 1 187 THR n 1 188 LEU n 1 189 VAL n 1 190 ASP n 1 191 LEU n 1 192 PRO n 1 193 GLY n 1 194 LEU n 1 195 THR n 1 196 ARG n 1 197 VAL n 1 198 PRO n 1 199 VAL n 1 200 GLY n 1 201 ASP n 1 202 GLN n 1 203 PRO n 1 204 ARG n 1 205 ASP n 1 206 ILE n 1 207 GLU n 1 208 ARG n 1 209 GLN n 1 210 ILE n 1 211 ARG n 1 212 ASP n 1 213 MET n 1 214 ILE n 1 215 LEU n 1 216 LYS n 1 217 TYR n 1 218 ILE n 1 219 GLN n 1 220 LYS n 1 221 PRO n 1 222 ASN n 1 223 ALA n 1 224 ILE n 1 225 ILE n 1 226 LEU n 1 227 ALA n 1 228 VAL n 1 229 THR n 1 230 ALA n 1 231 ALA n 1 232 ASN n 1 233 VAL n 1 234 ASP n 1 235 LEU n 1 236 ALA n 1 237 ASN n 1 238 SER n 1 239 ASP n 1 240 GLY n 1 241 LEU n 1 242 LYS n 1 243 LEU n 1 244 ALA n 1 245 ARG n 1 246 GLU n 1 247 VAL n 1 248 ASP n 1 249 PRO n 1 250 GLU n 1 251 GLY n 1 252 GLN n 1 253 ARG n 1 254 THR n 1 255 ILE n 1 256 GLY n 1 257 VAL n 1 258 LEU n 1 259 THR n 1 260 LYS n 1 261 VAL n 1 262 ASP n 1 263 LEU n 1 264 MET n 1 265 ASP n 1 266 GLU n 1 267 GLY n 1 268 THR n 1 269 ASP n 1 270 VAL n 1 271 VAL n 1 272 ASP n 1 273 ILE n 1 274 LEU n 1 275 ALA n 1 276 GLY n 1 277 ARG n 1 278 ILE n 1 279 ILE n 1 280 PRO n 1 281 LEU n 1 282 ARG n 1 283 LEU n 1 284 GLY n 1 285 TYR n 1 286 VAL n 1 287 PRO n 1 288 VAL n 1 289 VAL n 1 290 ASN n 1 291 ARG n 1 292 GLY n 1 293 GLN n 1 294 ARG n 1 295 ASP n 1 296 ILE n 1 297 ASP n 1 298 ASN n 1 299 LYS n 1 300 LYS n 1 301 PRO n 1 302 ILE n 1 303 THR n 1 304 ALA n 1 305 ALA n 1 306 LEU n 1 307 GLU n 1 308 ALA n 1 309 GLU n 1 310 LYS n 1 311 ALA n 1 312 PHE n 1 313 PHE n 1 314 GLU n 1 315 ASN n 1 316 HIS n 1 317 LYS n 1 318 ALA n 1 319 TYR n 1 320 ARG n 1 321 ASN n 1 322 LYS n 1 323 SER n 1 324 ALA n 1 325 TYR n 1 326 CYS n 1 327 GLY n 1 328 THR n 1 329 PRO n 1 330 TYR n 1 331 LEU n 1 332 ALA n 1 333 ARG n 1 334 LYS n 1 335 LEU n 1 336 ASN n 1 337 LEU n 1 338 ILE n 1 339 LEU n 1 340 MET n 1 341 MET n 1 342 HIS n 1 343 ILE n 1 344 LYS n 1 345 GLN n 1 346 THR n 1 347 LEU n 1 348 PRO n 1 349 ASP n 1 350 ILE n 1 351 LYS n 1 352 GLN n 1 353 ARG n 1 354 ILE n 1 355 SER n 1 356 SER n 1 357 SER n 1 358 LEU n 1 359 GLN n 1 360 LYS n 1 361 TYR n 1 362 GLN n 1 363 GLN n 1 364 GLU n 1 365 LEU n 1 366 GLU n 1 367 ALA n 1 368 LEU n 1 369 GLY n 1 370 PRO n 1 371 SER n 1 372 LEU n 1 373 LEU n 1 374 GLY n 1 375 ASN n 1 376 SER n 1 377 ALA n 1 378 ASN n 1 379 ALA n 1 380 GLY n 1 381 LEU n 1 382 GLU n 1 383 VAL n 1 384 LEU n 1 385 PHE n 1 386 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 386 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CTHT_0061810 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'DSM 1495 / CBS 144.50 / IMI 039719' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Chaetomium thermophilum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 759272 _entity_src_gen.pdbx_gene_src_variant 'thermophilum DSM 1495' _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code G0SFF0_CHATD _struct_ref.pdbx_db_accession G0SFF0 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTADAPAGTLAQPGGISDPNLIKLVNKLQDVFTTVGVNNPIDLPQIVVVGSQSSGKSSVLENIVGRDFLPRGQGIVTRRP LVLQLINRQSSGNANGFDERLADSTDKAANLDEWGEFLHLPGQKFYDFNKIRDEINRETEAKVGRNAGISPAPINLRIYS PHVLNLTLVDLPGLTRVPVGDQPRDIERQIRDMILKYIQKPNAIILAVTAANVDLANSDGLKLAREVDPEGQRTIGVLTK VDLMDEGTDVVDILAGRIIPLRLGYVPVVNRGQRDIDNKKPITAALEAEKAFFENHKAYRNKSAYCGTPYLARKLNLILM MHIKQTLPDIKQRISSSLQKYQQELEALGPSLLGNSAN ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6DI7 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 21 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 378 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession G0SFF0 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 358 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 358 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6DI7 MET A 1 ? UNP G0SFF0 ? ? 'expression tag' -19 1 1 6DI7 GLY A 2 ? UNP G0SFF0 ? ? 'expression tag' -18 2 1 6DI7 SER A 3 ? UNP G0SFF0 ? ? 'expression tag' -17 3 1 6DI7 SER A 4 ? UNP G0SFF0 ? ? 'expression tag' -16 4 1 6DI7 HIS A 5 ? UNP G0SFF0 ? ? 'expression tag' -15 5 1 6DI7 HIS A 6 ? UNP G0SFF0 ? ? 'expression tag' -14 6 1 6DI7 HIS A 7 ? UNP G0SFF0 ? ? 'expression tag' -13 7 1 6DI7 HIS A 8 ? UNP G0SFF0 ? ? 'expression tag' -12 8 1 6DI7 HIS A 9 ? UNP G0SFF0 ? ? 'expression tag' -11 9 1 6DI7 HIS A 10 ? UNP G0SFF0 ? ? 'expression tag' -10 10 1 6DI7 SER A 11 ? UNP G0SFF0 ? ? 'expression tag' -9 11 1 6DI7 SER A 12 ? UNP G0SFF0 ? ? 'expression tag' -8 12 1 6DI7 GLY A 13 ? UNP G0SFF0 ? ? 'expression tag' -7 13 1 6DI7 LEU A 14 ? UNP G0SFF0 ? ? 'expression tag' -6 14 1 6DI7 VAL A 15 ? UNP G0SFF0 ? ? 'expression tag' -5 15 1 6DI7 PRO A 16 ? UNP G0SFF0 ? ? 'expression tag' -4 16 1 6DI7 ARG A 17 ? UNP G0SFF0 ? ? 'expression tag' -3 17 1 6DI7 GLY A 18 ? UNP G0SFF0 ? ? 'expression tag' -2 18 1 6DI7 SER A 19 ? UNP G0SFF0 ? ? 'expression tag' -1 19 1 6DI7 HIS A 20 ? UNP G0SFF0 ? ? 'expression tag' 0 20 1 6DI7 ALA A 379 ? UNP G0SFF0 ? ? 'expression tag' 359 21 1 6DI7 GLY A 380 ? UNP G0SFF0 ? ? 'expression tag' 360 22 1 6DI7 LEU A 381 ? UNP G0SFF0 ? ? 'expression tag' 361 23 1 6DI7 GLU A 382 ? UNP G0SFF0 ? ? 'expression tag' 362 24 1 6DI7 VAL A 383 ? UNP G0SFF0 ? ? 'expression tag' 363 25 1 6DI7 LEU A 384 ? UNP G0SFF0 ? ? 'expression tag' 364 26 1 6DI7 PHE A 385 ? UNP G0SFF0 ? ? 'expression tag' 365 27 1 6DI7 GLN A 386 ? UNP G0SFF0 ? ? 'expression tag' 366 28 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6DI7 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.23 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 44.74 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '14-19% PEG4000, 0.07-0.1 M trisodium citrate, 20% isopropanol' _exptl_crystal_grow.pdbx_pH_range 7.4 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-07-30 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'double crystal Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 39.24 _reflns.entry_id 6DI7 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.3 _reflns.d_resolution_low 49.895 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 17235 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11 _reflns.pdbx_Rmerge_I_obs 0.093 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 17.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.098 _reflns.pdbx_Rpim_I_all 0.029 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.38 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.9 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1670 _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.74 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 11.1 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.776 _reflns_shell.pdbx_Rpim_I_all 0.232 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.894 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6DI7 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.300 _refine.ls_d_res_low 49.895 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 17234 _refine.ls_number_reflns_R_free 820 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.99 _refine.ls_percent_reflns_R_free 4.76 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1784 _refine.ls_R_factor_R_free 0.1993 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1773 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB entry 2X2E' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details 'Random selection' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 20.57 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.20 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2164 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 29 _refine_hist.number_atoms_solvent 86 _refine_hist.number_atoms_total 2279 _refine_hist.d_res_high 2.300 _refine_hist.d_res_low 49.895 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.002 ? 2236 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.532 ? 3041 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 10.903 ? 1387 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.043 ? 355 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.003 ? 411 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.3001 2.4442 . . 134 2677 100.00 . . . 0.2446 . 0.2018 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4442 2.6329 . . 135 2695 100.00 . . . 0.2798 . 0.2028 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6329 2.8978 . . 136 2698 100.00 . . . 0.2499 . 0.2084 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8978 3.3171 . . 131 2733 100.00 . . . 0.2279 . 0.2026 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.3171 4.1789 . . 144 2735 100.00 . . . 0.2124 . 0.1600 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.1789 49.9063 . . 140 2876 100.00 . . . 0.1419 . 0.1612 . . . . . . . . . . # _struct.entry_id 6DI7 _struct.title 'Vps1 GTPase-BSE fusion complexed with GDP' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6DI7 _struct_keywords.text 'Vps1, vacuolar protein sorting 1, GDP, dynamin-related protein, DRP, dynamin, vacuole, endosome, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 75 ? GLY A 85 ? GLY A 55 GLY A 65 1 ? 11 HELX_P HELX_P2 AA2 ASP A 118 ? ALA A 122 ? ASP A 98 ALA A 102 5 ? 5 HELX_P HELX_P3 AA3 ASP A 147 ? GLY A 164 ? ASP A 127 GLY A 144 1 ? 18 HELX_P HELX_P4 AA4 ASP A 205 ? GLN A 219 ? ASP A 185 GLN A 199 1 ? 15 HELX_P HELX_P5 AA5 ASP A 234 ? ASN A 237 ? ASP A 214 ASN A 217 5 ? 4 HELX_P HELX_P6 AA6 SER A 238 ? ASP A 248 ? SER A 218 ASP A 228 1 ? 11 HELX_P HELX_P7 AA7 LYS A 260 ? MET A 264 ? LYS A 240 MET A 244 5 ? 5 HELX_P HELX_P8 AA8 VAL A 270 ? ALA A 275 ? VAL A 250 ALA A 255 1 ? 6 HELX_P HELX_P9 AA9 GLY A 292 ? ASN A 298 ? GLY A 272 ASN A 278 1 ? 7 HELX_P HELX_P10 AB1 PRO A 301 ? HIS A 316 ? PRO A 281 HIS A 296 1 ? 16 HELX_P HELX_P11 AB2 TYR A 319 ? CYS A 326 ? TYR A 299 CYS A 306 5 ? 8 HELX_P HELX_P12 AB3 GLY A 327 ? GLN A 345 ? GLY A 307 GLN A 325 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A SER 77 OG ? ? ? 1_555 C MG . MG ? ? A SER 57 A MG 1002 1_555 ? ? ? ? ? ? ? 2.481 ? ? metalc2 metalc ? ? A THR 97 OG1 ? ? ? 1_555 C MG . MG ? ? A THR 77 A MG 1002 1_555 ? ? ? ? ? ? ? 2.392 ? ? metalc3 metalc ? ? B GDP . O3B ? ? ? 1_555 C MG . MG ? ? A GDP 1001 A MG 1002 1_555 ? ? ? ? ? ? ? 2.606 ? ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 1002 A HOH 1131 1_555 ? ? ? ? ? ? ? 2.800 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? anti-parallel AA1 4 5 ? parallel AA1 5 6 ? parallel AA1 6 7 ? parallel AA1 7 8 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TRP A 134 ? PHE A 137 ? TRP A 114 PHE A 117 AA1 2 ILE A 174 ? SER A 180 ? ILE A 154 SER A 160 AA1 3 LEU A 101 ? ASN A 107 ? LEU A 81 ASN A 87 AA1 4 LEU A 186 ? ASP A 190 ? LEU A 166 ASP A 170 AA1 5 GLN A 65 ? GLY A 70 ? GLN A 45 GLY A 50 AA1 6 ALA A 223 ? ALA A 230 ? ALA A 203 ALA A 210 AA1 7 THR A 254 ? THR A 259 ? THR A 234 THR A 239 AA1 8 TYR A 285 ? PRO A 287 ? TYR A 265 PRO A 267 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLU A 136 ? N GLU A 116 O ARG A 177 ? O ARG A 157 AA1 2 3 O ILE A 178 ? O ILE A 158 N ILE A 106 ? N ILE A 86 AA1 3 4 N LEU A 103 ? N LEU A 83 O LEU A 188 ? O LEU A 168 AA1 4 5 O THR A 187 ? O THR A 167 N ILE A 66 ? N ILE A 46 AA1 5 6 N VAL A 67 ? N VAL A 47 O ILE A 224 ? O ILE A 204 AA1 6 7 N ILE A 225 ? N ILE A 205 O ILE A 255 ? O ILE A 235 AA1 7 8 N LEU A 258 ? N LEU A 238 O VAL A 286 ? O VAL A 266 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GDP 1001 ? 21 'binding site for residue GDP A 1001' AC2 Software A MG 1002 ? 5 'binding site for residue MG A 1002' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 21 SER A 73 ? SER A 53 . ? 1_555 ? 2 AC1 21 SER A 74 ? SER A 54 . ? 1_555 ? 3 AC1 21 GLY A 75 ? GLY A 55 . ? 1_555 ? 4 AC1 21 LYS A 76 ? LYS A 56 . ? 1_555 ? 5 AC1 21 SER A 77 ? SER A 57 . ? 1_555 ? 6 AC1 21 SER A 78 ? SER A 58 . ? 1_555 ? 7 AC1 21 ARG A 91 ? ARG A 71 . ? 1_555 ? 8 AC1 21 LYS A 260 ? LYS A 240 . ? 1_555 ? 9 AC1 21 ASP A 262 ? ASP A 242 . ? 1_555 ? 10 AC1 21 LEU A 263 ? LEU A 243 . ? 1_555 ? 11 AC1 21 ASP A 265 ? ASP A 245 . ? 17_555 ? 12 AC1 21 VAL A 289 ? VAL A 269 . ? 1_555 ? 13 AC1 21 ASN A 290 ? ASN A 270 . ? 1_555 ? 14 AC1 21 ARG A 291 ? ARG A 271 . ? 1_555 ? 15 AC1 21 GLY A 292 ? GLY A 272 . ? 1_555 ? 16 AC1 21 GLN A 293 ? GLN A 273 . ? 1_555 ? 17 AC1 21 ILE A 296 ? ILE A 276 . ? 1_555 ? 18 AC1 21 MG C . ? MG A 1002 . ? 1_555 ? 19 AC1 21 HOH D . ? HOH A 1102 . ? 1_555 ? 20 AC1 21 HOH D . ? HOH A 1113 . ? 1_555 ? 21 AC1 21 HOH D . ? HOH A 1131 . ? 1_555 ? 22 AC2 5 SER A 77 ? SER A 57 . ? 1_555 ? 23 AC2 5 THR A 97 ? THR A 77 . ? 1_555 ? 24 AC2 5 ASP A 190 ? ASP A 170 . ? 1_555 ? 25 AC2 5 GDP B . ? GDP A 1001 . ? 1_555 ? 26 AC2 5 HOH D . ? HOH A 1131 . ? 1_555 ? # _atom_sites.entry_id 6DI7 _atom_sites.fract_transf_matrix[1][1] 0.011768 _atom_sites.fract_transf_matrix[1][2] 0.006794 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013588 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003683 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -19 ? ? ? A . n A 1 2 GLY 2 -18 ? ? ? A . n A 1 3 SER 3 -17 ? ? ? A . n A 1 4 SER 4 -16 ? ? ? A . n A 1 5 HIS 5 -15 ? ? ? A . n A 1 6 HIS 6 -14 ? ? ? A . n A 1 7 HIS 7 -13 ? ? ? A . n A 1 8 HIS 8 -12 ? ? ? A . n A 1 9 HIS 9 -11 ? ? ? A . n A 1 10 HIS 10 -10 ? ? ? A . n A 1 11 SER 11 -9 ? ? ? A . n A 1 12 SER 12 -8 ? ? ? A . n A 1 13 GLY 13 -7 ? ? ? A . n A 1 14 LEU 14 -6 ? ? ? A . n A 1 15 VAL 15 -5 ? ? ? A . n A 1 16 PRO 16 -4 ? ? ? A . n A 1 17 ARG 17 -3 ? ? ? A . n A 1 18 GLY 18 -2 ? ? ? A . n A 1 19 SER 19 -1 ? ? ? A . n A 1 20 HIS 20 0 ? ? ? A . n A 1 21 MET 21 1 ? ? ? A . n A 1 22 THR 22 2 ? ? ? A . n A 1 23 ALA 23 3 ? ? ? A . n A 1 24 ASP 24 4 ? ? ? A . n A 1 25 ALA 25 5 ? ? ? A . n A 1 26 PRO 26 6 ? ? ? A . n A 1 27 ALA 27 7 ? ? ? A . n A 1 28 GLY 28 8 ? ? ? A . n A 1 29 THR 29 9 ? ? ? A . n A 1 30 LEU 30 10 ? ? ? A . n A 1 31 ALA 31 11 ? ? ? A . n A 1 32 GLN 32 12 ? ? ? A . n A 1 33 PRO 33 13 ? ? ? A . n A 1 34 GLY 34 14 ? ? ? A . n A 1 35 GLY 35 15 ? ? ? A . n A 1 36 ILE 36 16 ? ? ? A . n A 1 37 SER 37 17 ? ? ? A . n A 1 38 ASP 38 18 ? ? ? A . n A 1 39 PRO 39 19 ? ? ? A . n A 1 40 ASN 40 20 ? ? ? A . n A 1 41 LEU 41 21 ? ? ? A . n A 1 42 ILE 42 22 ? ? ? A . n A 1 43 LYS 43 23 ? ? ? A . n A 1 44 LEU 44 24 ? ? ? A . n A 1 45 VAL 45 25 ? ? ? A . n A 1 46 ASN 46 26 ? ? ? A . n A 1 47 LYS 47 27 ? ? ? A . n A 1 48 LEU 48 28 ? ? ? A . n A 1 49 GLN 49 29 ? ? ? A . n A 1 50 ASP 50 30 ? ? ? A . n A 1 51 VAL 51 31 ? ? ? A . n A 1 52 PHE 52 32 ? ? ? A . n A 1 53 THR 53 33 ? ? ? A . n A 1 54 THR 54 34 ? ? ? A . n A 1 55 VAL 55 35 ? ? ? A . n A 1 56 GLY 56 36 ? ? ? A . n A 1 57 VAL 57 37 ? ? ? A . n A 1 58 ASN 58 38 ? ? ? A . n A 1 59 ASN 59 39 ? ? ? A . n A 1 60 PRO 60 40 ? ? ? A . n A 1 61 ILE 61 41 ? ? ? A . n A 1 62 ASP 62 42 42 ASP ASP A . n A 1 63 LEU 63 43 43 LEU LEU A . n A 1 64 PRO 64 44 44 PRO PRO A . n A 1 65 GLN 65 45 45 GLN GLN A . n A 1 66 ILE 66 46 46 ILE ILE A . n A 1 67 VAL 67 47 47 VAL VAL A . n A 1 68 VAL 68 48 48 VAL VAL A . n A 1 69 VAL 69 49 49 VAL VAL A . n A 1 70 GLY 70 50 50 GLY GLY A . n A 1 71 SER 71 51 51 SER SER A . n A 1 72 GLN 72 52 52 GLN GLN A . n A 1 73 SER 73 53 53 SER SER A . n A 1 74 SER 74 54 54 SER SER A . n A 1 75 GLY 75 55 55 GLY GLY A . n A 1 76 LYS 76 56 56 LYS LYS A . n A 1 77 SER 77 57 57 SER SER A . n A 1 78 SER 78 58 58 SER SER A . n A 1 79 VAL 79 59 59 VAL VAL A . n A 1 80 LEU 80 60 60 LEU LEU A . n A 1 81 GLU 81 61 61 GLU GLU A . n A 1 82 ASN 82 62 62 ASN ASN A . n A 1 83 ILE 83 63 63 ILE ILE A . n A 1 84 VAL 84 64 64 VAL VAL A . n A 1 85 GLY 85 65 65 GLY GLY A . n A 1 86 ARG 86 66 66 ARG ARG A . n A 1 87 ASP 87 67 67 ASP ASP A . n A 1 88 PHE 88 68 68 PHE PHE A . n A 1 89 LEU 89 69 69 LEU LEU A . n A 1 90 PRO 90 70 70 PRO PRO A . n A 1 91 ARG 91 71 71 ARG ARG A . n A 1 92 GLY 92 72 72 GLY GLY A . n A 1 93 GLN 93 73 73 GLN GLN A . n A 1 94 GLY 94 74 74 GLY GLY A . n A 1 95 ILE 95 75 75 ILE ILE A . n A 1 96 VAL 96 76 76 VAL VAL A . n A 1 97 THR 97 77 77 THR THR A . n A 1 98 ARG 98 78 78 ARG ARG A . n A 1 99 ARG 99 79 79 ARG ARG A . n A 1 100 PRO 100 80 80 PRO PRO A . n A 1 101 LEU 101 81 81 LEU LEU A . n A 1 102 VAL 102 82 82 VAL VAL A . n A 1 103 LEU 103 83 83 LEU LEU A . n A 1 104 GLN 104 84 84 GLN GLN A . n A 1 105 LEU 105 85 85 LEU LEU A . n A 1 106 ILE 106 86 86 ILE ILE A . n A 1 107 ASN 107 87 87 ASN ASN A . n A 1 108 ARG 108 88 88 ARG ARG A . n A 1 109 GLN 109 89 89 GLN GLN A . n A 1 110 SER 110 90 90 SER SER A . n A 1 111 SER 111 91 ? ? ? A . n A 1 112 GLY 112 92 ? ? ? A . n A 1 113 ASN 113 93 ? ? ? A . n A 1 114 ALA 114 94 ? ? ? A . n A 1 115 ASN 115 95 ? ? ? A . n A 1 116 GLY 116 96 ? ? ? A . n A 1 117 PHE 117 97 ? ? ? A . n A 1 118 ASP 118 98 98 ASP ASP A . n A 1 119 GLU 119 99 99 GLU GLU A . n A 1 120 ARG 120 100 100 ARG ARG A . n A 1 121 LEU 121 101 101 LEU LEU A . n A 1 122 ALA 122 102 102 ALA ALA A . n A 1 123 ASP 123 103 103 ASP ASP A . n A 1 124 SER 124 104 104 SER SER A . n A 1 125 THR 125 105 105 THR THR A . n A 1 126 ASP 126 106 106 ASP ASP A . n A 1 127 LYS 127 107 107 LYS LYS A . n A 1 128 ALA 128 108 108 ALA ALA A . n A 1 129 ALA 129 109 109 ALA ALA A . n A 1 130 ASN 130 110 110 ASN ASN A . n A 1 131 LEU 131 111 111 LEU LEU A . n A 1 132 ASP 132 112 112 ASP ASP A . n A 1 133 GLU 133 113 113 GLU GLU A . n A 1 134 TRP 134 114 114 TRP TRP A . n A 1 135 GLY 135 115 115 GLY GLY A . n A 1 136 GLU 136 116 116 GLU GLU A . n A 1 137 PHE 137 117 117 PHE PHE A . n A 1 138 LEU 138 118 118 LEU LEU A . n A 1 139 HIS 139 119 119 HIS HIS A . n A 1 140 LEU 140 120 120 LEU LEU A . n A 1 141 PRO 141 121 121 PRO PRO A . n A 1 142 GLY 142 122 122 GLY GLY A . n A 1 143 GLN 143 123 123 GLN GLN A . n A 1 144 LYS 144 124 124 LYS LYS A . n A 1 145 PHE 145 125 125 PHE PHE A . n A 1 146 TYR 146 126 126 TYR TYR A . n A 1 147 ASP 147 127 127 ASP ASP A . n A 1 148 PHE 148 128 128 PHE PHE A . n A 1 149 ASN 149 129 129 ASN ASN A . n A 1 150 LYS 150 130 130 LYS LYS A . n A 1 151 ILE 151 131 131 ILE ILE A . n A 1 152 ARG 152 132 132 ARG ARG A . n A 1 153 ASP 153 133 133 ASP ASP A . n A 1 154 GLU 154 134 134 GLU GLU A . n A 1 155 ILE 155 135 135 ILE ILE A . n A 1 156 ASN 156 136 136 ASN ASN A . n A 1 157 ARG 157 137 137 ARG ARG A . n A 1 158 GLU 158 138 138 GLU GLU A . n A 1 159 THR 159 139 139 THR THR A . n A 1 160 GLU 160 140 140 GLU GLU A . n A 1 161 ALA 161 141 141 ALA ALA A . n A 1 162 LYS 162 142 142 LYS LYS A . n A 1 163 VAL 163 143 143 VAL VAL A . n A 1 164 GLY 164 144 144 GLY GLY A . n A 1 165 ARG 165 145 145 ARG ARG A . n A 1 166 ASN 166 146 146 ASN ASN A . n A 1 167 ALA 167 147 147 ALA ALA A . n A 1 168 GLY 168 148 148 GLY GLY A . n A 1 169 ILE 169 149 149 ILE ILE A . n A 1 170 SER 170 150 150 SER SER A . n A 1 171 PRO 171 151 151 PRO PRO A . n A 1 172 ALA 172 152 152 ALA ALA A . n A 1 173 PRO 173 153 153 PRO PRO A . n A 1 174 ILE 174 154 154 ILE ILE A . n A 1 175 ASN 175 155 155 ASN ASN A . n A 1 176 LEU 176 156 156 LEU LEU A . n A 1 177 ARG 177 157 157 ARG ARG A . n A 1 178 ILE 178 158 158 ILE ILE A . n A 1 179 TYR 179 159 159 TYR TYR A . n A 1 180 SER 180 160 160 SER SER A . n A 1 181 PRO 181 161 161 PRO PRO A . n A 1 182 HIS 182 162 162 HIS HIS A . n A 1 183 VAL 183 163 163 VAL VAL A . n A 1 184 LEU 184 164 164 LEU LEU A . n A 1 185 ASN 185 165 165 ASN ASN A . n A 1 186 LEU 186 166 166 LEU LEU A . n A 1 187 THR 187 167 167 THR THR A . n A 1 188 LEU 188 168 168 LEU LEU A . n A 1 189 VAL 189 169 169 VAL VAL A . n A 1 190 ASP 190 170 170 ASP ASP A . n A 1 191 LEU 191 171 171 LEU LEU A . n A 1 192 PRO 192 172 172 PRO PRO A . n A 1 193 GLY 193 173 173 GLY GLY A . n A 1 194 LEU 194 174 174 LEU LEU A . n A 1 195 THR 195 175 175 THR THR A . n A 1 196 ARG 196 176 176 ARG ARG A . n A 1 197 VAL 197 177 177 VAL VAL A . n A 1 198 PRO 198 178 178 PRO PRO A . n A 1 199 VAL 199 179 179 VAL VAL A . n A 1 200 GLY 200 180 180 GLY GLY A . n A 1 201 ASP 201 181 181 ASP ASP A . n A 1 202 GLN 202 182 182 GLN GLN A . n A 1 203 PRO 203 183 183 PRO PRO A . n A 1 204 ARG 204 184 184 ARG ARG A . n A 1 205 ASP 205 185 185 ASP ASP A . n A 1 206 ILE 206 186 186 ILE ILE A . n A 1 207 GLU 207 187 187 GLU GLU A . n A 1 208 ARG 208 188 188 ARG ARG A . n A 1 209 GLN 209 189 189 GLN GLN A . n A 1 210 ILE 210 190 190 ILE ILE A . n A 1 211 ARG 211 191 191 ARG ARG A . n A 1 212 ASP 212 192 192 ASP ASP A . n A 1 213 MET 213 193 193 MET MET A . n A 1 214 ILE 214 194 194 ILE ILE A . n A 1 215 LEU 215 195 195 LEU LEU A . n A 1 216 LYS 216 196 196 LYS LYS A . n A 1 217 TYR 217 197 197 TYR TYR A . n A 1 218 ILE 218 198 198 ILE ILE A . n A 1 219 GLN 219 199 199 GLN GLN A . n A 1 220 LYS 220 200 200 LYS LYS A . n A 1 221 PRO 221 201 201 PRO PRO A . n A 1 222 ASN 222 202 202 ASN ASN A . n A 1 223 ALA 223 203 203 ALA ALA A . n A 1 224 ILE 224 204 204 ILE ILE A . n A 1 225 ILE 225 205 205 ILE ILE A . n A 1 226 LEU 226 206 206 LEU LEU A . n A 1 227 ALA 227 207 207 ALA ALA A . n A 1 228 VAL 228 208 208 VAL VAL A . n A 1 229 THR 229 209 209 THR THR A . n A 1 230 ALA 230 210 210 ALA ALA A . n A 1 231 ALA 231 211 211 ALA ALA A . n A 1 232 ASN 232 212 212 ASN ASN A . n A 1 233 VAL 233 213 213 VAL VAL A . n A 1 234 ASP 234 214 214 ASP ASP A . n A 1 235 LEU 235 215 215 LEU LEU A . n A 1 236 ALA 236 216 216 ALA ALA A . n A 1 237 ASN 237 217 217 ASN ASN A . n A 1 238 SER 238 218 218 SER SER A . n A 1 239 ASP 239 219 219 ASP ASP A . n A 1 240 GLY 240 220 220 GLY GLY A . n A 1 241 LEU 241 221 221 LEU LEU A . n A 1 242 LYS 242 222 222 LYS LYS A . n A 1 243 LEU 243 223 223 LEU LEU A . n A 1 244 ALA 244 224 224 ALA ALA A . n A 1 245 ARG 245 225 225 ARG ARG A . n A 1 246 GLU 246 226 226 GLU GLU A . n A 1 247 VAL 247 227 227 VAL VAL A . n A 1 248 ASP 248 228 228 ASP ASP A . n A 1 249 PRO 249 229 229 PRO PRO A . n A 1 250 GLU 250 230 230 GLU GLU A . n A 1 251 GLY 251 231 231 GLY GLY A . n A 1 252 GLN 252 232 232 GLN GLN A . n A 1 253 ARG 253 233 233 ARG ARG A . n A 1 254 THR 254 234 234 THR THR A . n A 1 255 ILE 255 235 235 ILE ILE A . n A 1 256 GLY 256 236 236 GLY GLY A . n A 1 257 VAL 257 237 237 VAL VAL A . n A 1 258 LEU 258 238 238 LEU LEU A . n A 1 259 THR 259 239 239 THR THR A . n A 1 260 LYS 260 240 240 LYS LYS A . n A 1 261 VAL 261 241 241 VAL VAL A . n A 1 262 ASP 262 242 242 ASP ASP A . n A 1 263 LEU 263 243 243 LEU LEU A . n A 1 264 MET 264 244 244 MET MET A . n A 1 265 ASP 265 245 245 ASP ASP A . n A 1 266 GLU 266 246 246 GLU GLU A . n A 1 267 GLY 267 247 247 GLY GLY A . n A 1 268 THR 268 248 248 THR THR A . n A 1 269 ASP 269 249 249 ASP ASP A . n A 1 270 VAL 270 250 250 VAL VAL A . n A 1 271 VAL 271 251 251 VAL VAL A . n A 1 272 ASP 272 252 252 ASP ASP A . n A 1 273 ILE 273 253 253 ILE ILE A . n A 1 274 LEU 274 254 254 LEU LEU A . n A 1 275 ALA 275 255 255 ALA ALA A . n A 1 276 GLY 276 256 256 GLY GLY A . n A 1 277 ARG 277 257 257 ARG ARG A . n A 1 278 ILE 278 258 258 ILE ILE A . n A 1 279 ILE 279 259 259 ILE ILE A . n A 1 280 PRO 280 260 260 PRO PRO A . n A 1 281 LEU 281 261 261 LEU LEU A . n A 1 282 ARG 282 262 262 ARG ARG A . n A 1 283 LEU 283 263 263 LEU LEU A . n A 1 284 GLY 284 264 264 GLY GLY A . n A 1 285 TYR 285 265 265 TYR TYR A . n A 1 286 VAL 286 266 266 VAL VAL A . n A 1 287 PRO 287 267 267 PRO PRO A . n A 1 288 VAL 288 268 268 VAL VAL A . n A 1 289 VAL 289 269 269 VAL VAL A . n A 1 290 ASN 290 270 270 ASN ASN A . n A 1 291 ARG 291 271 271 ARG ARG A . n A 1 292 GLY 292 272 272 GLY GLY A . n A 1 293 GLN 293 273 273 GLN GLN A . n A 1 294 ARG 294 274 274 ARG ARG A . n A 1 295 ASP 295 275 275 ASP ASP A . n A 1 296 ILE 296 276 276 ILE ILE A . n A 1 297 ASP 297 277 277 ASP ASP A . n A 1 298 ASN 298 278 278 ASN ASN A . n A 1 299 LYS 299 279 279 LYS LYS A . n A 1 300 LYS 300 280 280 LYS LYS A . n A 1 301 PRO 301 281 281 PRO PRO A . n A 1 302 ILE 302 282 282 ILE ILE A . n A 1 303 THR 303 283 283 THR THR A . n A 1 304 ALA 304 284 284 ALA ALA A . n A 1 305 ALA 305 285 285 ALA ALA A . n A 1 306 LEU 306 286 286 LEU LEU A . n A 1 307 GLU 307 287 287 GLU GLU A . n A 1 308 ALA 308 288 288 ALA ALA A . n A 1 309 GLU 309 289 289 GLU GLU A . n A 1 310 LYS 310 290 290 LYS LYS A . n A 1 311 ALA 311 291 291 ALA ALA A . n A 1 312 PHE 312 292 292 PHE PHE A . n A 1 313 PHE 313 293 293 PHE PHE A . n A 1 314 GLU 314 294 294 GLU GLU A . n A 1 315 ASN 315 295 295 ASN ASN A . n A 1 316 HIS 316 296 296 HIS HIS A . n A 1 317 LYS 317 297 297 LYS LYS A . n A 1 318 ALA 318 298 298 ALA ALA A . n A 1 319 TYR 319 299 299 TYR TYR A . n A 1 320 ARG 320 300 300 ARG ARG A . n A 1 321 ASN 321 301 301 ASN ASN A . n A 1 322 LYS 322 302 302 LYS LYS A . n A 1 323 SER 323 303 303 SER SER A . n A 1 324 ALA 324 304 304 ALA ALA A . n A 1 325 TYR 325 305 305 TYR TYR A . n A 1 326 CYS 326 306 306 CYS CYS A . n A 1 327 GLY 327 307 307 GLY GLY A . n A 1 328 THR 328 308 308 THR THR A . n A 1 329 PRO 329 309 309 PRO PRO A . n A 1 330 TYR 330 310 310 TYR TYR A . n A 1 331 LEU 331 311 311 LEU LEU A . n A 1 332 ALA 332 312 312 ALA ALA A . n A 1 333 ARG 333 313 313 ARG ARG A . n A 1 334 LYS 334 314 314 LYS LYS A . n A 1 335 LEU 335 315 315 LEU LEU A . n A 1 336 ASN 336 316 316 ASN ASN A . n A 1 337 LEU 337 317 317 LEU LEU A . n A 1 338 ILE 338 318 318 ILE ILE A . n A 1 339 LEU 339 319 319 LEU LEU A . n A 1 340 MET 340 320 320 MET MET A . n A 1 341 MET 341 321 321 MET MET A . n A 1 342 HIS 342 322 322 HIS HIS A . n A 1 343 ILE 343 323 323 ILE ILE A . n A 1 344 LYS 344 324 324 LYS LYS A . n A 1 345 GLN 345 325 325 GLN GLN A . n A 1 346 THR 346 326 326 THR THR A . n A 1 347 LEU 347 327 327 LEU LEU A . n A 1 348 PRO 348 328 ? ? ? A . n A 1 349 ASP 349 329 ? ? ? A . n A 1 350 ILE 350 330 ? ? ? A . n A 1 351 LYS 351 331 ? ? ? A . n A 1 352 GLN 352 332 ? ? ? A . n A 1 353 ARG 353 333 ? ? ? A . n A 1 354 ILE 354 334 ? ? ? A . n A 1 355 SER 355 335 ? ? ? A . n A 1 356 SER 356 336 ? ? ? A . n A 1 357 SER 357 337 ? ? ? A . n A 1 358 LEU 358 338 ? ? ? A . n A 1 359 GLN 359 339 ? ? ? A . n A 1 360 LYS 360 340 ? ? ? A . n A 1 361 TYR 361 341 ? ? ? A . n A 1 362 GLN 362 342 ? ? ? A . n A 1 363 GLN 363 343 ? ? ? A . n A 1 364 GLU 364 344 ? ? ? A . n A 1 365 LEU 365 345 ? ? ? A . n A 1 366 GLU 366 346 ? ? ? A . n A 1 367 ALA 367 347 ? ? ? A . n A 1 368 LEU 368 348 ? ? ? A . n A 1 369 GLY 369 349 ? ? ? A . n A 1 370 PRO 370 350 ? ? ? A . n A 1 371 SER 371 351 ? ? ? A . n A 1 372 LEU 372 352 ? ? ? A . n A 1 373 LEU 373 353 ? ? ? A . n A 1 374 GLY 374 354 ? ? ? A . n A 1 375 ASN 375 355 ? ? ? A . n A 1 376 SER 376 356 ? ? ? A . n A 1 377 ALA 377 357 ? ? ? A . n A 1 378 ASN 378 358 ? ? ? A . n A 1 379 ALA 379 359 ? ? ? A . n A 1 380 GLY 380 360 ? ? ? A . n A 1 381 LEU 381 361 ? ? ? A . n A 1 382 GLU 382 362 ? ? ? A . n A 1 383 VAL 383 363 ? ? ? A . n A 1 384 LEU 384 364 ? ? ? A . n A 1 385 PHE 385 365 ? ? ? A . n A 1 386 GLN 386 366 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDP 1 1001 1001 GDP GDP A . C 3 MG 1 1002 1002 MG MG A . D 4 HOH 1 1101 58 HOH HOH A . D 4 HOH 2 1102 26 HOH HOH A . D 4 HOH 3 1103 11 HOH HOH A . D 4 HOH 4 1104 68 HOH HOH A . D 4 HOH 5 1105 44 HOH HOH A . D 4 HOH 6 1106 59 HOH HOH A . D 4 HOH 7 1107 7 HOH HOH A . D 4 HOH 8 1108 32 HOH HOH A . D 4 HOH 9 1109 77 HOH HOH A . D 4 HOH 10 1110 47 HOH HOH A . D 4 HOH 11 1111 2 HOH HOH A . D 4 HOH 12 1112 30 HOH HOH A . D 4 HOH 13 1113 40 HOH HOH A . D 4 HOH 14 1114 15 HOH HOH A . D 4 HOH 15 1115 45 HOH HOH A . D 4 HOH 16 1116 1 HOH HOH A . D 4 HOH 17 1117 66 HOH HOH A . D 4 HOH 18 1118 8 HOH HOH A . D 4 HOH 19 1119 5 HOH HOH A . D 4 HOH 20 1120 56 HOH HOH A . D 4 HOH 21 1121 54 HOH HOH A . D 4 HOH 22 1122 23 HOH HOH A . D 4 HOH 23 1123 74 HOH HOH A . D 4 HOH 24 1124 9 HOH HOH A . D 4 HOH 25 1125 38 HOH HOH A . D 4 HOH 26 1126 13 HOH HOH A . D 4 HOH 27 1127 62 HOH HOH A . D 4 HOH 28 1128 22 HOH HOH A . D 4 HOH 29 1129 70 HOH HOH A . D 4 HOH 30 1130 36 HOH HOH A . D 4 HOH 31 1131 53 HOH HOH A . D 4 HOH 32 1132 35 HOH HOH A . D 4 HOH 33 1133 12 HOH HOH A . D 4 HOH 34 1134 3 HOH HOH A . D 4 HOH 35 1135 18 HOH HOH A . D 4 HOH 36 1136 57 HOH HOH A . D 4 HOH 37 1137 41 HOH HOH A . D 4 HOH 38 1138 76 HOH HOH A . D 4 HOH 39 1139 43 HOH HOH A . D 4 HOH 40 1140 51 HOH HOH A . D 4 HOH 41 1141 60 HOH HOH A . D 4 HOH 42 1142 10 HOH HOH A . D 4 HOH 43 1143 34 HOH HOH A . D 4 HOH 44 1144 14 HOH HOH A . D 4 HOH 45 1145 6 HOH HOH A . D 4 HOH 46 1146 4 HOH HOH A . D 4 HOH 47 1147 21 HOH HOH A . D 4 HOH 48 1148 33 HOH HOH A . D 4 HOH 49 1149 25 HOH HOH A . D 4 HOH 50 1150 20 HOH HOH A . D 4 HOH 51 1151 72 HOH HOH A . D 4 HOH 52 1152 64 HOH HOH A . D 4 HOH 53 1153 28 HOH HOH A . D 4 HOH 54 1154 61 HOH HOH A . D 4 HOH 55 1155 37 HOH HOH A . D 4 HOH 56 1156 69 HOH HOH A . D 4 HOH 57 1157 65 HOH HOH A . D 4 HOH 58 1158 52 HOH HOH A . D 4 HOH 59 1159 78 HOH HOH A . D 4 HOH 60 1160 24 HOH HOH A . D 4 HOH 61 1161 83 HOH HOH A . D 4 HOH 62 1162 46 HOH HOH A . D 4 HOH 63 1163 17 HOH HOH A . D 4 HOH 64 1164 55 HOH HOH A . D 4 HOH 65 1165 86 HOH HOH A . D 4 HOH 66 1166 29 HOH HOH A . D 4 HOH 67 1167 85 HOH HOH A . D 4 HOH 68 1168 80 HOH HOH A . D 4 HOH 69 1169 84 HOH HOH A . D 4 HOH 70 1170 63 HOH HOH A . D 4 HOH 71 1171 19 HOH HOH A . D 4 HOH 72 1172 82 HOH HOH A . D 4 HOH 73 1173 39 HOH HOH A . D 4 HOH 74 1174 42 HOH HOH A . D 4 HOH 75 1175 81 HOH HOH A . D 4 HOH 76 1176 27 HOH HOH A . D 4 HOH 77 1177 67 HOH HOH A . D 4 HOH 78 1178 49 HOH HOH A . D 4 HOH 79 1179 73 HOH HOH A . D 4 HOH 80 1180 16 HOH HOH A . D 4 HOH 81 1181 48 HOH HOH A . D 4 HOH 82 1182 31 HOH HOH A . D 4 HOH 83 1183 50 HOH HOH A . D 4 HOH 84 1184 79 HOH HOH A . D 4 HOH 85 1185 71 HOH HOH A . D 4 HOH 86 1186 75 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 900 ? 1 MORE -18 ? 1 'SSA (A^2)' 14060 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 1121 ? D HOH . 2 1 A HOH 1185 ? D HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG ? A SER 77 ? A SER 57 ? 1_555 MG ? C MG . ? A MG 1002 ? 1_555 OG1 ? A THR 97 ? A THR 77 ? 1_555 94.0 ? 2 OG ? A SER 77 ? A SER 57 ? 1_555 MG ? C MG . ? A MG 1002 ? 1_555 O3B ? B GDP . ? A GDP 1001 ? 1_555 70.2 ? 3 OG1 ? A THR 97 ? A THR 77 ? 1_555 MG ? C MG . ? A MG 1002 ? 1_555 O3B ? B GDP . ? A GDP 1001 ? 1_555 149.1 ? 4 OG ? A SER 77 ? A SER 57 ? 1_555 MG ? C MG . ? A MG 1002 ? 1_555 O ? D HOH . ? A HOH 1131 ? 1_555 97.2 ? 5 OG1 ? A THR 97 ? A THR 77 ? 1_555 MG ? C MG . ? A MG 1002 ? 1_555 O ? D HOH . ? A HOH 1131 ? 1_555 82.4 ? 6 O3B ? B GDP . ? A GDP 1001 ? 1_555 MG ? C MG . ? A MG 1002 ? 1_555 O ? D HOH . ? A HOH 1131 ? 1_555 73.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-08-22 2 'Structure model' 1 1 2018-10-17 3 'Structure model' 1 2 2020-01-01 4 'Structure model' 1 3 2023-10-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' pdbx_audit_support 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' database_2 7 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation_author.identifier_ORCID' 5 3 'Structure model' '_pdbx_audit_support.funding_organization' 6 4 'Structure model' '_database_2.pdbx_DOI' 7 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 5.8047 15.7729 115.4237 0.6024 0.3893 0.3929 -0.0441 -0.0803 0.1086 3.5935 2.5829 5.8315 -0.8005 1.6549 -2.2713 0.1662 -0.5516 -0.4290 0.4101 -0.0615 -0.1298 0.7331 -0.1502 -0.0825 'X-RAY DIFFRACTION' 2 ? refined 5.5371 29.8114 104.0245 0.3084 0.2085 0.2696 0.0010 -0.0511 0.0226 2.3941 1.9083 1.8495 0.2734 0.2143 0.4719 0.1130 -0.1887 -0.0300 0.2778 -0.0728 -0.0675 0.0931 0.0071 -0.0064 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 42 through 153 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 154 through 327 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.13_2998: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? MOSFLM ? ? ? 7.2.1 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.5.14 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? 2.5.6 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 HH22 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ARG _pdbx_validate_close_contact.auth_seq_id_1 176 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OD1 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 ASP _pdbx_validate_close_contact.auth_seq_id_2 219 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.58 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 176 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 176 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 176 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 124.47 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 4.17 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 68 ? ? -158.90 9.56 2 1 ASP A 103 ? ? -103.34 57.10 3 1 LEU A 120 ? ? -117.30 70.14 4 1 ALA A 147 ? ? -114.80 -142.53 5 1 ASP A 185 ? ? -99.35 34.00 6 1 ARG A 233 ? ? -141.08 30.68 7 1 ILE A 258 ? ? -108.91 -75.79 8 1 GLN A 325 ? ? -102.14 59.93 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 89 ? CG ? A GLN 109 CG 2 1 Y 1 A GLN 89 ? CD ? A GLN 109 CD 3 1 Y 1 A GLN 89 ? OE1 ? A GLN 109 OE1 4 1 Y 1 A GLN 89 ? NE2 ? A GLN 109 NE2 5 1 Y 1 A GLU 99 ? CG ? A GLU 119 CG 6 1 Y 1 A GLU 99 ? CD ? A GLU 119 CD 7 1 Y 1 A GLU 99 ? OE1 ? A GLU 119 OE1 8 1 Y 1 A GLU 99 ? OE2 ? A GLU 119 OE2 9 1 Y 1 A LYS 107 ? CG ? A LYS 127 CG 10 1 Y 1 A LYS 107 ? CD ? A LYS 127 CD 11 1 Y 1 A LYS 107 ? CE ? A LYS 127 CE 12 1 Y 1 A LYS 107 ? NZ ? A LYS 127 NZ 13 1 Y 1 A ARG 145 ? CG ? A ARG 165 CG 14 1 Y 1 A ARG 145 ? CD ? A ARG 165 CD 15 1 Y 1 A ARG 145 ? NE ? A ARG 165 NE 16 1 Y 1 A ARG 145 ? CZ ? A ARG 165 CZ 17 1 Y 1 A ARG 145 ? NH1 ? A ARG 165 NH1 18 1 Y 1 A ARG 145 ? NH2 ? A ARG 165 NH2 19 1 Y 1 A LYS 196 ? CG ? A LYS 216 CG 20 1 Y 1 A LYS 196 ? CD ? A LYS 216 CD 21 1 Y 1 A LYS 196 ? CE ? A LYS 216 CE 22 1 Y 1 A LYS 196 ? NZ ? A LYS 216 NZ 23 1 Y 1 A GLU 246 ? CG ? A GLU 266 CG 24 1 Y 1 A GLU 246 ? CD ? A GLU 266 CD 25 1 Y 1 A GLU 246 ? OE1 ? A GLU 266 OE1 26 1 Y 1 A GLU 246 ? OE2 ? A GLU 266 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -19 ? A MET 1 2 1 Y 1 A GLY -18 ? A GLY 2 3 1 Y 1 A SER -17 ? A SER 3 4 1 Y 1 A SER -16 ? A SER 4 5 1 Y 1 A HIS -15 ? A HIS 5 6 1 Y 1 A HIS -14 ? A HIS 6 7 1 Y 1 A HIS -13 ? A HIS 7 8 1 Y 1 A HIS -12 ? A HIS 8 9 1 Y 1 A HIS -11 ? A HIS 9 10 1 Y 1 A HIS -10 ? A HIS 10 11 1 Y 1 A SER -9 ? A SER 11 12 1 Y 1 A SER -8 ? A SER 12 13 1 Y 1 A GLY -7 ? A GLY 13 14 1 Y 1 A LEU -6 ? A LEU 14 15 1 Y 1 A VAL -5 ? A VAL 15 16 1 Y 1 A PRO -4 ? A PRO 16 17 1 Y 1 A ARG -3 ? A ARG 17 18 1 Y 1 A GLY -2 ? A GLY 18 19 1 Y 1 A SER -1 ? A SER 19 20 1 Y 1 A HIS 0 ? A HIS 20 21 1 Y 1 A MET 1 ? A MET 21 22 1 Y 1 A THR 2 ? A THR 22 23 1 Y 1 A ALA 3 ? A ALA 23 24 1 Y 1 A ASP 4 ? A ASP 24 25 1 Y 1 A ALA 5 ? A ALA 25 26 1 Y 1 A PRO 6 ? A PRO 26 27 1 Y 1 A ALA 7 ? A ALA 27 28 1 Y 1 A GLY 8 ? A GLY 28 29 1 Y 1 A THR 9 ? A THR 29 30 1 Y 1 A LEU 10 ? A LEU 30 31 1 Y 1 A ALA 11 ? A ALA 31 32 1 Y 1 A GLN 12 ? A GLN 32 33 1 Y 1 A PRO 13 ? A PRO 33 34 1 Y 1 A GLY 14 ? A GLY 34 35 1 Y 1 A GLY 15 ? A GLY 35 36 1 Y 1 A ILE 16 ? A ILE 36 37 1 Y 1 A SER 17 ? A SER 37 38 1 Y 1 A ASP 18 ? A ASP 38 39 1 Y 1 A PRO 19 ? A PRO 39 40 1 Y 1 A ASN 20 ? A ASN 40 41 1 Y 1 A LEU 21 ? A LEU 41 42 1 Y 1 A ILE 22 ? A ILE 42 43 1 Y 1 A LYS 23 ? A LYS 43 44 1 Y 1 A LEU 24 ? A LEU 44 45 1 Y 1 A VAL 25 ? A VAL 45 46 1 Y 1 A ASN 26 ? A ASN 46 47 1 Y 1 A LYS 27 ? A LYS 47 48 1 Y 1 A LEU 28 ? A LEU 48 49 1 Y 1 A GLN 29 ? A GLN 49 50 1 Y 1 A ASP 30 ? A ASP 50 51 1 Y 1 A VAL 31 ? A VAL 51 52 1 Y 1 A PHE 32 ? A PHE 52 53 1 Y 1 A THR 33 ? A THR 53 54 1 Y 1 A THR 34 ? A THR 54 55 1 Y 1 A VAL 35 ? A VAL 55 56 1 Y 1 A GLY 36 ? A GLY 56 57 1 Y 1 A VAL 37 ? A VAL 57 58 1 Y 1 A ASN 38 ? A ASN 58 59 1 Y 1 A ASN 39 ? A ASN 59 60 1 Y 1 A PRO 40 ? A PRO 60 61 1 Y 1 A ILE 41 ? A ILE 61 62 1 Y 1 A SER 91 ? A SER 111 63 1 Y 1 A GLY 92 ? A GLY 112 64 1 Y 1 A ASN 93 ? A ASN 113 65 1 Y 1 A ALA 94 ? A ALA 114 66 1 Y 1 A ASN 95 ? A ASN 115 67 1 Y 1 A GLY 96 ? A GLY 116 68 1 Y 1 A PHE 97 ? A PHE 117 69 1 Y 1 A PRO 328 ? A PRO 348 70 1 Y 1 A ASP 329 ? A ASP 349 71 1 Y 1 A ILE 330 ? A ILE 350 72 1 Y 1 A LYS 331 ? A LYS 351 73 1 Y 1 A GLN 332 ? A GLN 352 74 1 Y 1 A ARG 333 ? A ARG 353 75 1 Y 1 A ILE 334 ? A ILE 354 76 1 Y 1 A SER 335 ? A SER 355 77 1 Y 1 A SER 336 ? A SER 356 78 1 Y 1 A SER 337 ? A SER 357 79 1 Y 1 A LEU 338 ? A LEU 358 80 1 Y 1 A GLN 339 ? A GLN 359 81 1 Y 1 A LYS 340 ? A LYS 360 82 1 Y 1 A TYR 341 ? A TYR 361 83 1 Y 1 A GLN 342 ? A GLN 362 84 1 Y 1 A GLN 343 ? A GLN 363 85 1 Y 1 A GLU 344 ? A GLU 364 86 1 Y 1 A LEU 345 ? A LEU 365 87 1 Y 1 A GLU 346 ? A GLU 366 88 1 Y 1 A ALA 347 ? A ALA 367 89 1 Y 1 A LEU 348 ? A LEU 368 90 1 Y 1 A GLY 349 ? A GLY 369 91 1 Y 1 A PRO 350 ? A PRO 370 92 1 Y 1 A SER 351 ? A SER 371 93 1 Y 1 A LEU 352 ? A LEU 372 94 1 Y 1 A LEU 353 ? A LEU 373 95 1 Y 1 A GLY 354 ? A GLY 374 96 1 Y 1 A ASN 355 ? A ASN 375 97 1 Y 1 A SER 356 ? A SER 376 98 1 Y 1 A ALA 357 ? A ALA 377 99 1 Y 1 A ASN 358 ? A ASN 378 100 1 Y 1 A ALA 359 ? A ALA 379 101 1 Y 1 A GLY 360 ? A GLY 380 102 1 Y 1 A LEU 361 ? A LEU 381 103 1 Y 1 A GLU 362 ? A GLU 382 104 1 Y 1 A VAL 363 ? A VAL 383 105 1 Y 1 A LEU 364 ? A LEU 384 106 1 Y 1 A PHE 365 ? A PHE 385 107 1 Y 1 A GLN 366 ? A GLN 386 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GDP PB P N N 88 GDP O1B O N N 89 GDP O2B O N N 90 GDP O3B O N N 91 GDP O3A O N N 92 GDP PA P N N 93 GDP O1A O N N 94 GDP O2A O N N 95 GDP "O5'" O N N 96 GDP "C5'" C N N 97 GDP "C4'" C N R 98 GDP "O4'" O N N 99 GDP "C3'" C N S 100 GDP "O3'" O N N 101 GDP "C2'" C N R 102 GDP "O2'" O N N 103 GDP "C1'" C N R 104 GDP N9 N Y N 105 GDP C8 C Y N 106 GDP N7 N Y N 107 GDP C5 C Y N 108 GDP C6 C N N 109 GDP O6 O N N 110 GDP N1 N N N 111 GDP C2 C N N 112 GDP N2 N N N 113 GDP N3 N N N 114 GDP C4 C Y N 115 GDP HOB2 H N N 116 GDP HOB3 H N N 117 GDP HOA2 H N N 118 GDP "H5'" H N N 119 GDP "H5''" H N N 120 GDP "H4'" H N N 121 GDP "H3'" H N N 122 GDP "HO3'" H N N 123 GDP "H2'" H N N 124 GDP "HO2'" H N N 125 GDP "H1'" H N N 126 GDP H8 H N N 127 GDP HN1 H N N 128 GDP HN21 H N N 129 GDP HN22 H N N 130 GLN N N N N 131 GLN CA C N S 132 GLN C C N N 133 GLN O O N N 134 GLN CB C N N 135 GLN CG C N N 136 GLN CD C N N 137 GLN OE1 O N N 138 GLN NE2 N N N 139 GLN OXT O N N 140 GLN H H N N 141 GLN H2 H N N 142 GLN HA H N N 143 GLN HB2 H N N 144 GLN HB3 H N N 145 GLN HG2 H N N 146 GLN HG3 H N N 147 GLN HE21 H N N 148 GLN HE22 H N N 149 GLN HXT H N N 150 GLU N N N N 151 GLU CA C N S 152 GLU C C N N 153 GLU O O N N 154 GLU CB C N N 155 GLU CG C N N 156 GLU CD C N N 157 GLU OE1 O N N 158 GLU OE2 O N N 159 GLU OXT O N N 160 GLU H H N N 161 GLU H2 H N N 162 GLU HA H N N 163 GLU HB2 H N N 164 GLU HB3 H N N 165 GLU HG2 H N N 166 GLU HG3 H N N 167 GLU HE2 H N N 168 GLU HXT H N N 169 GLY N N N N 170 GLY CA C N N 171 GLY C C N N 172 GLY O O N N 173 GLY OXT O N N 174 GLY H H N N 175 GLY H2 H N N 176 GLY HA2 H N N 177 GLY HA3 H N N 178 GLY HXT H N N 179 HIS N N N N 180 HIS CA C N S 181 HIS C C N N 182 HIS O O N N 183 HIS CB C N N 184 HIS CG C Y N 185 HIS ND1 N Y N 186 HIS CD2 C Y N 187 HIS CE1 C Y N 188 HIS NE2 N Y N 189 HIS OXT O N N 190 HIS H H N N 191 HIS H2 H N N 192 HIS HA H N N 193 HIS HB2 H N N 194 HIS HB3 H N N 195 HIS HD1 H N N 196 HIS HD2 H N N 197 HIS HE1 H N N 198 HIS HE2 H N N 199 HIS HXT H N N 200 HOH O O N N 201 HOH H1 H N N 202 HOH H2 H N N 203 ILE N N N N 204 ILE CA C N S 205 ILE C C N N 206 ILE O O N N 207 ILE CB C N S 208 ILE CG1 C N N 209 ILE CG2 C N N 210 ILE CD1 C N N 211 ILE OXT O N N 212 ILE H H N N 213 ILE H2 H N N 214 ILE HA H N N 215 ILE HB H N N 216 ILE HG12 H N N 217 ILE HG13 H N N 218 ILE HG21 H N N 219 ILE HG22 H N N 220 ILE HG23 H N N 221 ILE HD11 H N N 222 ILE HD12 H N N 223 ILE HD13 H N N 224 ILE HXT H N N 225 LEU N N N N 226 LEU CA C N S 227 LEU C C N N 228 LEU O O N N 229 LEU CB C N N 230 LEU CG C N N 231 LEU CD1 C N N 232 LEU CD2 C N N 233 LEU OXT O N N 234 LEU H H N N 235 LEU H2 H N N 236 LEU HA H N N 237 LEU HB2 H N N 238 LEU HB3 H N N 239 LEU HG H N N 240 LEU HD11 H N N 241 LEU HD12 H N N 242 LEU HD13 H N N 243 LEU HD21 H N N 244 LEU HD22 H N N 245 LEU HD23 H N N 246 LEU HXT H N N 247 LYS N N N N 248 LYS CA C N S 249 LYS C C N N 250 LYS O O N N 251 LYS CB C N N 252 LYS CG C N N 253 LYS CD C N N 254 LYS CE C N N 255 LYS NZ N N N 256 LYS OXT O N N 257 LYS H H N N 258 LYS H2 H N N 259 LYS HA H N N 260 LYS HB2 H N N 261 LYS HB3 H N N 262 LYS HG2 H N N 263 LYS HG3 H N N 264 LYS HD2 H N N 265 LYS HD3 H N N 266 LYS HE2 H N N 267 LYS HE3 H N N 268 LYS HZ1 H N N 269 LYS HZ2 H N N 270 LYS HZ3 H N N 271 LYS HXT H N N 272 MET N N N N 273 MET CA C N S 274 MET C C N N 275 MET O O N N 276 MET CB C N N 277 MET CG C N N 278 MET SD S N N 279 MET CE C N N 280 MET OXT O N N 281 MET H H N N 282 MET H2 H N N 283 MET HA H N N 284 MET HB2 H N N 285 MET HB3 H N N 286 MET HG2 H N N 287 MET HG3 H N N 288 MET HE1 H N N 289 MET HE2 H N N 290 MET HE3 H N N 291 MET HXT H N N 292 MG MG MG N N 293 PHE N N N N 294 PHE CA C N S 295 PHE C C N N 296 PHE O O N N 297 PHE CB C N N 298 PHE CG C Y N 299 PHE CD1 C Y N 300 PHE CD2 C Y N 301 PHE CE1 C Y N 302 PHE CE2 C Y N 303 PHE CZ C Y N 304 PHE OXT O N N 305 PHE H H N N 306 PHE H2 H N N 307 PHE HA H N N 308 PHE HB2 H N N 309 PHE HB3 H N N 310 PHE HD1 H N N 311 PHE HD2 H N N 312 PHE HE1 H N N 313 PHE HE2 H N N 314 PHE HZ H N N 315 PHE HXT H N N 316 PRO N N N N 317 PRO CA C N S 318 PRO C C N N 319 PRO O O N N 320 PRO CB C N N 321 PRO CG C N N 322 PRO CD C N N 323 PRO OXT O N N 324 PRO H H N N 325 PRO HA H N N 326 PRO HB2 H N N 327 PRO HB3 H N N 328 PRO HG2 H N N 329 PRO HG3 H N N 330 PRO HD2 H N N 331 PRO HD3 H N N 332 PRO HXT H N N 333 SER N N N N 334 SER CA C N S 335 SER C C N N 336 SER O O N N 337 SER CB C N N 338 SER OG O N N 339 SER OXT O N N 340 SER H H N N 341 SER H2 H N N 342 SER HA H N N 343 SER HB2 H N N 344 SER HB3 H N N 345 SER HG H N N 346 SER HXT H N N 347 THR N N N N 348 THR CA C N S 349 THR C C N N 350 THR O O N N 351 THR CB C N R 352 THR OG1 O N N 353 THR CG2 C N N 354 THR OXT O N N 355 THR H H N N 356 THR H2 H N N 357 THR HA H N N 358 THR HB H N N 359 THR HG1 H N N 360 THR HG21 H N N 361 THR HG22 H N N 362 THR HG23 H N N 363 THR HXT H N N 364 TRP N N N N 365 TRP CA C N S 366 TRP C C N N 367 TRP O O N N 368 TRP CB C N N 369 TRP CG C Y N 370 TRP CD1 C Y N 371 TRP CD2 C Y N 372 TRP NE1 N Y N 373 TRP CE2 C Y N 374 TRP CE3 C Y N 375 TRP CZ2 C Y N 376 TRP CZ3 C Y N 377 TRP CH2 C Y N 378 TRP OXT O N N 379 TRP H H N N 380 TRP H2 H N N 381 TRP HA H N N 382 TRP HB2 H N N 383 TRP HB3 H N N 384 TRP HD1 H N N 385 TRP HE1 H N N 386 TRP HE3 H N N 387 TRP HZ2 H N N 388 TRP HZ3 H N N 389 TRP HH2 H N N 390 TRP HXT H N N 391 TYR N N N N 392 TYR CA C N S 393 TYR C C N N 394 TYR O O N N 395 TYR CB C N N 396 TYR CG C Y N 397 TYR CD1 C Y N 398 TYR CD2 C Y N 399 TYR CE1 C Y N 400 TYR CE2 C Y N 401 TYR CZ C Y N 402 TYR OH O N N 403 TYR OXT O N N 404 TYR H H N N 405 TYR H2 H N N 406 TYR HA H N N 407 TYR HB2 H N N 408 TYR HB3 H N N 409 TYR HD1 H N N 410 TYR HD2 H N N 411 TYR HE1 H N N 412 TYR HE2 H N N 413 TYR HH H N N 414 TYR HXT H N N 415 VAL N N N N 416 VAL CA C N S 417 VAL C C N N 418 VAL O O N N 419 VAL CB C N N 420 VAL CG1 C N N 421 VAL CG2 C N N 422 VAL OXT O N N 423 VAL H H N N 424 VAL H2 H N N 425 VAL HA H N N 426 VAL HB H N N 427 VAL HG11 H N N 428 VAL HG12 H N N 429 VAL HG13 H N N 430 VAL HG21 H N N 431 VAL HG22 H N N 432 VAL HG23 H N N 433 VAL HXT H N N 434 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GDP PB O1B doub N N 83 GDP PB O2B sing N N 84 GDP PB O3B sing N N 85 GDP PB O3A sing N N 86 GDP O2B HOB2 sing N N 87 GDP O3B HOB3 sing N N 88 GDP O3A PA sing N N 89 GDP PA O1A doub N N 90 GDP PA O2A sing N N 91 GDP PA "O5'" sing N N 92 GDP O2A HOA2 sing N N 93 GDP "O5'" "C5'" sing N N 94 GDP "C5'" "C4'" sing N N 95 GDP "C5'" "H5'" sing N N 96 GDP "C5'" "H5''" sing N N 97 GDP "C4'" "O4'" sing N N 98 GDP "C4'" "C3'" sing N N 99 GDP "C4'" "H4'" sing N N 100 GDP "O4'" "C1'" sing N N 101 GDP "C3'" "O3'" sing N N 102 GDP "C3'" "C2'" sing N N 103 GDP "C3'" "H3'" sing N N 104 GDP "O3'" "HO3'" sing N N 105 GDP "C2'" "O2'" sing N N 106 GDP "C2'" "C1'" sing N N 107 GDP "C2'" "H2'" sing N N 108 GDP "O2'" "HO2'" sing N N 109 GDP "C1'" N9 sing N N 110 GDP "C1'" "H1'" sing N N 111 GDP N9 C8 sing Y N 112 GDP N9 C4 sing Y N 113 GDP C8 N7 doub Y N 114 GDP C8 H8 sing N N 115 GDP N7 C5 sing Y N 116 GDP C5 C6 sing N N 117 GDP C5 C4 doub Y N 118 GDP C6 O6 doub N N 119 GDP C6 N1 sing N N 120 GDP N1 C2 sing N N 121 GDP N1 HN1 sing N N 122 GDP C2 N2 sing N N 123 GDP C2 N3 doub N N 124 GDP N2 HN21 sing N N 125 GDP N2 HN22 sing N N 126 GDP N3 C4 sing N N 127 GLN N CA sing N N 128 GLN N H sing N N 129 GLN N H2 sing N N 130 GLN CA C sing N N 131 GLN CA CB sing N N 132 GLN CA HA sing N N 133 GLN C O doub N N 134 GLN C OXT sing N N 135 GLN CB CG sing N N 136 GLN CB HB2 sing N N 137 GLN CB HB3 sing N N 138 GLN CG CD sing N N 139 GLN CG HG2 sing N N 140 GLN CG HG3 sing N N 141 GLN CD OE1 doub N N 142 GLN CD NE2 sing N N 143 GLN NE2 HE21 sing N N 144 GLN NE2 HE22 sing N N 145 GLN OXT HXT sing N N 146 GLU N CA sing N N 147 GLU N H sing N N 148 GLU N H2 sing N N 149 GLU CA C sing N N 150 GLU CA CB sing N N 151 GLU CA HA sing N N 152 GLU C O doub N N 153 GLU C OXT sing N N 154 GLU CB CG sing N N 155 GLU CB HB2 sing N N 156 GLU CB HB3 sing N N 157 GLU CG CD sing N N 158 GLU CG HG2 sing N N 159 GLU CG HG3 sing N N 160 GLU CD OE1 doub N N 161 GLU CD OE2 sing N N 162 GLU OE2 HE2 sing N N 163 GLU OXT HXT sing N N 164 GLY N CA sing N N 165 GLY N H sing N N 166 GLY N H2 sing N N 167 GLY CA C sing N N 168 GLY CA HA2 sing N N 169 GLY CA HA3 sing N N 170 GLY C O doub N N 171 GLY C OXT sing N N 172 GLY OXT HXT sing N N 173 HIS N CA sing N N 174 HIS N H sing N N 175 HIS N H2 sing N N 176 HIS CA C sing N N 177 HIS CA CB sing N N 178 HIS CA HA sing N N 179 HIS C O doub N N 180 HIS C OXT sing N N 181 HIS CB CG sing N N 182 HIS CB HB2 sing N N 183 HIS CB HB3 sing N N 184 HIS CG ND1 sing Y N 185 HIS CG CD2 doub Y N 186 HIS ND1 CE1 doub Y N 187 HIS ND1 HD1 sing N N 188 HIS CD2 NE2 sing Y N 189 HIS CD2 HD2 sing N N 190 HIS CE1 NE2 sing Y N 191 HIS CE1 HE1 sing N N 192 HIS NE2 HE2 sing N N 193 HIS OXT HXT sing N N 194 HOH O H1 sing N N 195 HOH O H2 sing N N 196 ILE N CA sing N N 197 ILE N H sing N N 198 ILE N H2 sing N N 199 ILE CA C sing N N 200 ILE CA CB sing N N 201 ILE CA HA sing N N 202 ILE C O doub N N 203 ILE C OXT sing N N 204 ILE CB CG1 sing N N 205 ILE CB CG2 sing N N 206 ILE CB HB sing N N 207 ILE CG1 CD1 sing N N 208 ILE CG1 HG12 sing N N 209 ILE CG1 HG13 sing N N 210 ILE CG2 HG21 sing N N 211 ILE CG2 HG22 sing N N 212 ILE CG2 HG23 sing N N 213 ILE CD1 HD11 sing N N 214 ILE CD1 HD12 sing N N 215 ILE CD1 HD13 sing N N 216 ILE OXT HXT sing N N 217 LEU N CA sing N N 218 LEU N H sing N N 219 LEU N H2 sing N N 220 LEU CA C sing N N 221 LEU CA CB sing N N 222 LEU CA HA sing N N 223 LEU C O doub N N 224 LEU C OXT sing N N 225 LEU CB CG sing N N 226 LEU CB HB2 sing N N 227 LEU CB HB3 sing N N 228 LEU CG CD1 sing N N 229 LEU CG CD2 sing N N 230 LEU CG HG sing N N 231 LEU CD1 HD11 sing N N 232 LEU CD1 HD12 sing N N 233 LEU CD1 HD13 sing N N 234 LEU CD2 HD21 sing N N 235 LEU CD2 HD22 sing N N 236 LEU CD2 HD23 sing N N 237 LEU OXT HXT sing N N 238 LYS N CA sing N N 239 LYS N H sing N N 240 LYS N H2 sing N N 241 LYS CA C sing N N 242 LYS CA CB sing N N 243 LYS CA HA sing N N 244 LYS C O doub N N 245 LYS C OXT sing N N 246 LYS CB CG sing N N 247 LYS CB HB2 sing N N 248 LYS CB HB3 sing N N 249 LYS CG CD sing N N 250 LYS CG HG2 sing N N 251 LYS CG HG3 sing N N 252 LYS CD CE sing N N 253 LYS CD HD2 sing N N 254 LYS CD HD3 sing N N 255 LYS CE NZ sing N N 256 LYS CE HE2 sing N N 257 LYS CE HE3 sing N N 258 LYS NZ HZ1 sing N N 259 LYS NZ HZ2 sing N N 260 LYS NZ HZ3 sing N N 261 LYS OXT HXT sing N N 262 MET N CA sing N N 263 MET N H sing N N 264 MET N H2 sing N N 265 MET CA C sing N N 266 MET CA CB sing N N 267 MET CA HA sing N N 268 MET C O doub N N 269 MET C OXT sing N N 270 MET CB CG sing N N 271 MET CB HB2 sing N N 272 MET CB HB3 sing N N 273 MET CG SD sing N N 274 MET CG HG2 sing N N 275 MET CG HG3 sing N N 276 MET SD CE sing N N 277 MET CE HE1 sing N N 278 MET CE HE2 sing N N 279 MET CE HE3 sing N N 280 MET OXT HXT sing N N 281 PHE N CA sing N N 282 PHE N H sing N N 283 PHE N H2 sing N N 284 PHE CA C sing N N 285 PHE CA CB sing N N 286 PHE CA HA sing N N 287 PHE C O doub N N 288 PHE C OXT sing N N 289 PHE CB CG sing N N 290 PHE CB HB2 sing N N 291 PHE CB HB3 sing N N 292 PHE CG CD1 doub Y N 293 PHE CG CD2 sing Y N 294 PHE CD1 CE1 sing Y N 295 PHE CD1 HD1 sing N N 296 PHE CD2 CE2 doub Y N 297 PHE CD2 HD2 sing N N 298 PHE CE1 CZ doub Y N 299 PHE CE1 HE1 sing N N 300 PHE CE2 CZ sing Y N 301 PHE CE2 HE2 sing N N 302 PHE CZ HZ sing N N 303 PHE OXT HXT sing N N 304 PRO N CA sing N N 305 PRO N CD sing N N 306 PRO N H sing N N 307 PRO CA C sing N N 308 PRO CA CB sing N N 309 PRO CA HA sing N N 310 PRO C O doub N N 311 PRO C OXT sing N N 312 PRO CB CG sing N N 313 PRO CB HB2 sing N N 314 PRO CB HB3 sing N N 315 PRO CG CD sing N N 316 PRO CG HG2 sing N N 317 PRO CG HG3 sing N N 318 PRO CD HD2 sing N N 319 PRO CD HD3 sing N N 320 PRO OXT HXT sing N N 321 SER N CA sing N N 322 SER N H sing N N 323 SER N H2 sing N N 324 SER CA C sing N N 325 SER CA CB sing N N 326 SER CA HA sing N N 327 SER C O doub N N 328 SER C OXT sing N N 329 SER CB OG sing N N 330 SER CB HB2 sing N N 331 SER CB HB3 sing N N 332 SER OG HG sing N N 333 SER OXT HXT sing N N 334 THR N CA sing N N 335 THR N H sing N N 336 THR N H2 sing N N 337 THR CA C sing N N 338 THR CA CB sing N N 339 THR CA HA sing N N 340 THR C O doub N N 341 THR C OXT sing N N 342 THR CB OG1 sing N N 343 THR CB CG2 sing N N 344 THR CB HB sing N N 345 THR OG1 HG1 sing N N 346 THR CG2 HG21 sing N N 347 THR CG2 HG22 sing N N 348 THR CG2 HG23 sing N N 349 THR OXT HXT sing N N 350 TRP N CA sing N N 351 TRP N H sing N N 352 TRP N H2 sing N N 353 TRP CA C sing N N 354 TRP CA CB sing N N 355 TRP CA HA sing N N 356 TRP C O doub N N 357 TRP C OXT sing N N 358 TRP CB CG sing N N 359 TRP CB HB2 sing N N 360 TRP CB HB3 sing N N 361 TRP CG CD1 doub Y N 362 TRP CG CD2 sing Y N 363 TRP CD1 NE1 sing Y N 364 TRP CD1 HD1 sing N N 365 TRP CD2 CE2 doub Y N 366 TRP CD2 CE3 sing Y N 367 TRP NE1 CE2 sing Y N 368 TRP NE1 HE1 sing N N 369 TRP CE2 CZ2 sing Y N 370 TRP CE3 CZ3 doub Y N 371 TRP CE3 HE3 sing N N 372 TRP CZ2 CH2 doub Y N 373 TRP CZ2 HZ2 sing N N 374 TRP CZ3 CH2 sing Y N 375 TRP CZ3 HZ3 sing N N 376 TRP CH2 HH2 sing N N 377 TRP OXT HXT sing N N 378 TYR N CA sing N N 379 TYR N H sing N N 380 TYR N H2 sing N N 381 TYR CA C sing N N 382 TYR CA CB sing N N 383 TYR CA HA sing N N 384 TYR C O doub N N 385 TYR C OXT sing N N 386 TYR CB CG sing N N 387 TYR CB HB2 sing N N 388 TYR CB HB3 sing N N 389 TYR CG CD1 doub Y N 390 TYR CG CD2 sing Y N 391 TYR CD1 CE1 sing Y N 392 TYR CD1 HD1 sing N N 393 TYR CD2 CE2 doub Y N 394 TYR CD2 HD2 sing N N 395 TYR CE1 CZ doub Y N 396 TYR CE1 HE1 sing N N 397 TYR CE2 CZ sing Y N 398 TYR CE2 HE2 sing N N 399 TYR CZ OH sing N N 400 TYR OH HH sing N N 401 TYR OXT HXT sing N N 402 VAL N CA sing N N 403 VAL N H sing N N 404 VAL N H2 sing N N 405 VAL CA C sing N N 406 VAL CA CB sing N N 407 VAL CA HA sing N N 408 VAL C O doub N N 409 VAL C OXT sing N N 410 VAL CB CG1 sing N N 411 VAL CB CG2 sing N N 412 VAL CB HB sing N N 413 VAL CG1 HG11 sing N N 414 VAL CG1 HG12 sing N N 415 VAL CG1 HG13 sing N N 416 VAL CG2 HG21 sing N N 417 VAL CG2 HG22 sing N N 418 VAL CG2 HG23 sing N N 419 VAL OXT HXT sing N N 420 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number GM120102 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "GUANOSINE-5'-DIPHOSPHATE" GDP 3 'MAGNESIUM ION' MG 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2X2E _pdbx_initial_refinement_model.details 'PDB entry 2X2E' # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support homology _pdbx_struct_assembly_auth_evidence.details ? #