data_6DL2 # _entry.id 6DL2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.308 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6DL2 WWPDB D_1000234500 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6DL2 _pdbx_database_status.recvd_initial_deposition_date 2018-05-31 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Meagher, J.L.' 1 ? 'Stuckey, J.A.' 2 0000-0002-4192-8900 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J. Med. Chem.' _citation.journal_id_ASTM JMCMAR _citation.journal_id_CSD 0151 _citation.journal_id_ISSN 1520-4804 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 61 _citation.language ? _citation.page_first 6685 _citation.page_last 6704 _citation.title ;Discovery of QCA570 as an Exceptionally Potent and Efficacious Proteolysis Targeting Chimera (PROTAC) Degrader of the Bromodomain and Extra-Terminal (BET) Proteins Capable of Inducing Complete and Durable Tumor Regression. ; _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.jmedchem.8b00506 _citation.pdbx_database_id_PubMed 30019901 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Qin, C.' 1 ? primary 'Hu, Y.' 2 ? primary 'Zhou, B.' 3 0000-0003-1813-8035 primary 'Fernandez-Salas, E.' 4 ? primary 'Yang, C.Y.' 5 ? primary 'Liu, L.' 6 ? primary 'McEachern, D.' 7 ? primary 'Przybranowski, S.' 8 ? primary 'Wang, M.' 9 ? primary 'Stuckey, J.' 10 ? primary 'Meagher, J.' 11 ? primary 'Bai, L.' 12 ? primary 'Chen, Z.' 13 ? primary 'Lin, M.' 14 ? primary 'Yang, J.' 15 ? primary 'Ziazadeh, D.N.' 16 ? primary 'Xu, F.' 17 ? primary 'Hu, J.' 18 ? primary 'Xiang, W.' 19 ? primary 'Huang, L.' 20 ? primary 'Li, S.' 21 ? primary 'Wen, B.' 22 ? primary 'Sun, D.' 23 ? primary 'Wang, S.' 24 0000-0002-8782-6950 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6DL2 _cell.details ? _cell.formula_units_Z ? _cell.length_a 37.512 _cell.length_a_esd ? _cell.length_b 43.130 _cell.length_b_esd ? _cell.length_c 79.306 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6DL2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Bromodomain-containing protein 4' 15153.364 1 ? ? ? ? 2 non-polymer syn '3-benzyl-2,9-dimethyl-4H,6H-thieno[2,3-e][1,2,4]triazolo[3,4-c][1,4]oxazepine' 311.401 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 4 water nat water 18.015 147 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Protein HUNK1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SNANPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYW NAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE ; _entity_poly.pdbx_seq_one_letter_code_can ;SNANPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYW NAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 ASN n 1 5 PRO n 1 6 PRO n 1 7 PRO n 1 8 PRO n 1 9 GLU n 1 10 THR n 1 11 SER n 1 12 ASN n 1 13 PRO n 1 14 ASN n 1 15 LYS n 1 16 PRO n 1 17 LYS n 1 18 ARG n 1 19 GLN n 1 20 THR n 1 21 ASN n 1 22 GLN n 1 23 LEU n 1 24 GLN n 1 25 TYR n 1 26 LEU n 1 27 LEU n 1 28 ARG n 1 29 VAL n 1 30 VAL n 1 31 LEU n 1 32 LYS n 1 33 THR n 1 34 LEU n 1 35 TRP n 1 36 LYS n 1 37 HIS n 1 38 GLN n 1 39 PHE n 1 40 ALA n 1 41 TRP n 1 42 PRO n 1 43 PHE n 1 44 GLN n 1 45 GLN n 1 46 PRO n 1 47 VAL n 1 48 ASP n 1 49 ALA n 1 50 VAL n 1 51 LYS n 1 52 LEU n 1 53 ASN n 1 54 LEU n 1 55 PRO n 1 56 ASP n 1 57 TYR n 1 58 TYR n 1 59 LYS n 1 60 ILE n 1 61 ILE n 1 62 LYS n 1 63 THR n 1 64 PRO n 1 65 MET n 1 66 ASP n 1 67 MET n 1 68 GLY n 1 69 THR n 1 70 ILE n 1 71 LYS n 1 72 LYS n 1 73 ARG n 1 74 LEU n 1 75 GLU n 1 76 ASN n 1 77 ASN n 1 78 TYR n 1 79 TYR n 1 80 TRP n 1 81 ASN n 1 82 ALA n 1 83 GLN n 1 84 GLU n 1 85 CYS n 1 86 ILE n 1 87 GLN n 1 88 ASP n 1 89 PHE n 1 90 ASN n 1 91 THR n 1 92 MET n 1 93 PHE n 1 94 THR n 1 95 ASN n 1 96 CYS n 1 97 TYR n 1 98 ILE n 1 99 TYR n 1 100 ASN n 1 101 LYS n 1 102 PRO n 1 103 GLY n 1 104 ASP n 1 105 ASP n 1 106 ILE n 1 107 VAL n 1 108 LEU n 1 109 MET n 1 110 ALA n 1 111 GLU n 1 112 ALA n 1 113 LEU n 1 114 GLU n 1 115 LYS n 1 116 LEU n 1 117 PHE n 1 118 LEU n 1 119 GLN n 1 120 LYS n 1 121 ILE n 1 122 ASN n 1 123 GLU n 1 124 LEU n 1 125 PRO n 1 126 THR n 1 127 GLU n 1 128 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 128 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BRD4, HUNK1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BRD4_HUMAN _struct_ref.pdbx_db_accession O60885 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;NPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQ ECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE ; _struct_ref.pdbx_align_begin 44 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6DL2 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 128 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O60885 _struct_ref_seq.db_align_beg 44 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 168 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 44 _struct_ref_seq.pdbx_auth_seq_align_end 168 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6DL2 SER A 1 ? UNP O60885 ? ? 'expression tag' 41 1 1 6DL2 ASN A 2 ? UNP O60885 ? ? 'expression tag' 42 2 1 6DL2 ALA A 3 ? UNP O60885 ? ? 'expression tag' 43 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GUJ non-polymer . '3-benzyl-2,9-dimethyl-4H,6H-thieno[2,3-e][1,2,4]triazolo[3,4-c][1,4]oxazepine' ? 'C17 H17 N3 O S' 311.401 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6DL2 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.12 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 41.89 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '16% Peg 3350, 0.2 M Potassium Chloride' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX-300' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-04-24 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9787 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 21-ID-F' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9787 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 21-ID-F _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 19.890 _reflns.entry_id 6DL2 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.470 _reflns.d_resolution_low 50.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 22421 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.900 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.900 _reflns.pdbx_Rmerge_I_obs 0.050 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 13.500 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.227 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.054 _reflns.pdbx_Rpim_I_all 0.021 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.470 1.500 ? ? ? ? ? ? 1111 99.600 ? ? ? ? 0.191 ? ? ? ? ? ? ? ? 6.800 ? 0.907 ? ? 0.207 0.078 ? 1 1 0.981 ? 1.500 1.520 ? ? ? ? ? ? 1106 100.000 ? ? ? ? 0.174 ? ? ? ? ? ? ? ? 7.100 ? 0.914 ? ? 0.187 0.070 ? 2 1 0.985 ? 1.520 1.550 ? ? ? ? ? ? 1123 100.000 ? ? ? ? 0.155 ? ? ? ? ? ? ? ? 7.100 ? 0.927 ? ? 0.168 0.063 ? 3 1 0.989 ? 1.550 1.580 ? ? ? ? ? ? 1104 100.000 ? ? ? ? 0.144 ? ? ? ? ? ? ? ? 7.100 ? 1.059 ? ? 0.155 0.058 ? 4 1 0.989 ? 1.580 1.620 ? ? ? ? ? ? 1110 100.000 ? ? ? ? 0.126 ? ? ? ? ? ? ? ? 7.100 ? 1.046 ? ? 0.136 0.051 ? 5 1 0.992 ? 1.620 1.660 ? ? ? ? ? ? 1122 100.000 ? ? ? ? 0.113 ? ? ? ? ? ? ? ? 7.100 ? 1.131 ? ? 0.122 0.046 ? 6 1 0.993 ? 1.660 1.700 ? ? ? ? ? ? 1098 100.000 ? ? ? ? 0.108 ? ? ? ? ? ? ? ? 7.100 ? 1.153 ? ? 0.117 0.044 ? 7 1 0.994 ? 1.700 1.740 ? ? ? ? ? ? 1114 100.000 ? ? ? ? 0.096 ? ? ? ? ? ? ? ? 7.100 ? 1.178 ? ? 0.104 0.039 ? 8 1 0.994 ? 1.740 1.790 ? ? ? ? ? ? 1136 99.900 ? ? ? ? 0.086 ? ? ? ? ? ? ? ? 7.100 ? 1.244 ? ? 0.093 0.035 ? 9 1 0.995 ? 1.790 1.850 ? ? ? ? ? ? 1112 100.000 ? ? ? ? 0.080 ? ? ? ? ? ? ? ? 7.000 ? 1.325 ? ? 0.086 0.033 ? 10 1 0.995 ? 1.850 1.920 ? ? ? ? ? ? 1129 100.000 ? ? ? ? 0.072 ? ? ? ? ? ? ? ? 7.000 ? 1.322 ? ? 0.077 0.029 ? 11 1 0.994 ? 1.920 2.000 ? ? ? ? ? ? 1119 100.000 ? ? ? ? 0.068 ? ? ? ? ? ? ? ? 7.000 ? 1.354 ? ? 0.073 0.028 ? 12 1 0.996 ? 2.000 2.090 ? ? ? ? ? ? 1138 100.000 ? ? ? ? 0.059 ? ? ? ? ? ? ? ? 7.000 ? 1.353 ? ? 0.064 0.024 ? 13 1 0.997 ? 2.090 2.200 ? ? ? ? ? ? 1127 99.700 ? ? ? ? 0.058 ? ? ? ? ? ? ? ? 7.000 ? 1.401 ? ? 0.063 0.024 ? 14 1 0.997 ? 2.200 2.330 ? ? ? ? ? ? 1124 100.000 ? ? ? ? 0.058 ? ? ? ? ? ? ? ? 6.900 ? 1.467 ? ? 0.062 0.023 ? 15 1 0.997 ? 2.330 2.510 ? ? ? ? ? ? 1148 100.000 ? ? ? ? 0.060 ? ? ? ? ? ? ? ? 6.800 ? 1.643 ? ? 0.065 0.025 ? 16 1 0.995 ? 2.510 2.770 ? ? ? ? ? ? 1133 99.800 ? ? ? ? 0.055 ? ? ? ? ? ? ? ? 6.600 ? 1.643 ? ? 0.059 0.023 ? 17 1 0.997 ? 2.770 3.170 ? ? ? ? ? ? 1165 99.700 ? ? ? ? 0.053 ? ? ? ? ? ? ? ? 6.600 ? 1.600 ? ? 0.057 0.022 ? 18 1 0.997 ? 3.170 3.990 ? ? ? ? ? ? 1148 98.000 ? ? ? ? 0.037 ? ? ? ? ? ? ? ? 6.500 ? 1.085 ? ? 0.041 0.016 ? 19 1 0.998 ? 3.990 50.000 ? ? ? ? ? ? 1054 82.900 ? ? ? ? 0.028 ? ? ? ? ? ? ? ? 5.600 ? 0.650 ? ? 0.031 0.013 ? 20 1 0.999 ? # _refine.aniso_B[1][1] -5.4673 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] 3.0295 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] 2.4378 _refine.B_iso_max 103.810 _refine.B_iso_mean 25.2600 _refine.B_iso_min 12.470 _refine.correlation_coeff_Fo_to_Fc 0.9370 _refine.correlation_coeff_Fo_to_Fc_free 0.9330 _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6DL2 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.4700 _refine.ls_d_res_low 33.9100 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 22368 _refine.ls_number_reflns_R_free 1099 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.5000 _refine.ls_percent_reflns_R_free 4.9100 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1980 _refine.ls_R_factor_R_free 0.2160 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1970 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4LYI _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.0740 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.0790 _refine.pdbx_overall_SU_R_Blow_DPI 0.0830 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI 0.0770 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_analyze.entry_id 6DL2 _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_coordinate_error_obs 0.190 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_sigma_a_free_details ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_sigma_a_obs_details ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.RG_d_res_high ? _refine_analyze.RG_d_res_low ? _refine_analyze.RG_free ? _refine_analyze.RG_work ? _refine_analyze.RG_free_work_ratio ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.4700 _refine_hist.d_res_low 33.9100 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.number_atoms_solvent 147 _refine_hist.number_atoms_total 1210 _refine_hist.pdbx_number_residues_total 128 _refine_hist.pdbx_B_iso_mean_ligand 21.21 _refine_hist.pdbx_B_iso_mean_solvent 33.15 _refine_hist.pdbx_number_atoms_protein 1037 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? ? ? 375 ? t_dihedral_angle_d 2.000 SINUSOIDAL 'X-RAY DIFFRACTION' ? ? ? ? ? t_trig_c_planes ? ? 'X-RAY DIFFRACTION' ? ? ? 203 ? t_gen_planes 5.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 1107 ? t_it 20.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_nbd ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_improper_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_pseud_angle ? ? 'X-RAY DIFFRACTION' ? ? ? 144 ? t_chiral_improper_torsion 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_sum_occupancies ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_distance ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_angle ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? 1471 ? t_ideal_dist_contact 4.000 SEMIHARMONIC 'X-RAY DIFFRACTION' ? 0.009 ? 1107 ? t_bond_d 2.000 HARMONIC 'X-RAY DIFFRACTION' ? 0.910 ? 1513 ? t_angle_deg 2.000 HARMONIC 'X-RAY DIFFRACTION' ? 3.220 ? ? ? t_omega_torsion ? ? 'X-RAY DIFFRACTION' ? 15.460 ? ? ? t_other_torsion ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.4700 _refine_ls_shell.d_res_low 1.5400 _refine_ls_shell.number_reflns_all 2874 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 125 _refine_ls_shell.number_reflns_R_work 2749 _refine_ls_shell.percent_reflns_obs 97.0000 _refine_ls_shell.percent_reflns_R_free 4.3500 _refine_ls_shell.R_factor_all 0.1843 _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2209 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.1827 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 11 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6DL2 _struct.title 'BRD4 bromodomain 1 in complex with HYB157' _struct.pdbx_descriptor 'Bromodomain-containing protein 4' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6DL2 _struct_keywords.text 'Bromodomain, transcription' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 20 ? VAL A 29 ? THR A 60 VAL A 69 1 ? 10 HELX_P HELX_P2 AA2 VAL A 29 ? LYS A 36 ? VAL A 69 LYS A 76 1 ? 8 HELX_P HELX_P3 AA3 ALA A 40 ? GLN A 44 ? ALA A 80 GLN A 84 5 ? 5 HELX_P HELX_P4 AA4 ASP A 56 ? ILE A 61 ? ASP A 96 ILE A 101 1 ? 6 HELX_P HELX_P5 AA5 ASP A 66 ? ASN A 76 ? ASP A 106 ASN A 116 1 ? 11 HELX_P HELX_P6 AA6 ASN A 81 ? ASN A 100 ? ASN A 121 ASN A 140 1 ? 20 HELX_P HELX_P7 AA7 ASP A 104 ? ASN A 122 ? ASP A 144 ASN A 162 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GUJ 201 ? 8 'binding site for residue GUJ A 201' AC2 Software A EDO 202 ? 5 'binding site for residue EDO A 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 TRP A 41 ? TRP A 81 . ? 1_555 ? 2 AC1 8 PHE A 43 ? PHE A 83 . ? 1_555 ? 3 AC1 8 LEU A 52 ? LEU A 92 . ? 1_555 ? 4 AC1 8 LYS A 59 ? LYS A 99 . ? 4_455 ? 5 AC1 8 ASN A 100 ? ASN A 140 . ? 1_555 ? 6 AC1 8 ILE A 106 ? ILE A 146 . ? 1_555 ? 7 AC1 8 MET A 109 ? MET A 149 . ? 1_555 ? 8 AC1 8 HOH D . ? HOH A 301 . ? 1_555 ? 9 AC2 5 ILE A 60 ? ILE A 100 . ? 1_555 ? 10 AC2 5 ILE A 61 ? ILE A 101 . ? 1_555 ? 11 AC2 5 LYS A 62 ? LYS A 102 . ? 1_555 ? 12 AC2 5 THR A 63 ? THR A 103 . ? 1_555 ? 13 AC2 5 ASN A 95 ? ASN A 135 . ? 1_555 ? # _atom_sites.entry_id 6DL2 _atom_sites.fract_transf_matrix[1][1] 0.026658 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023186 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012609 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 41 41 SER SER A . n A 1 2 ASN 2 42 42 ASN ASN A . n A 1 3 ALA 3 43 43 ALA ALA A . n A 1 4 ASN 4 44 44 ASN ASN A . n A 1 5 PRO 5 45 45 PRO PRO A . n A 1 6 PRO 6 46 46 PRO PRO A . n A 1 7 PRO 7 47 47 PRO PRO A . n A 1 8 PRO 8 48 48 PRO PRO A . n A 1 9 GLU 9 49 49 GLU GLU A . n A 1 10 THR 10 50 50 THR THR A . n A 1 11 SER 11 51 51 SER SER A . n A 1 12 ASN 12 52 52 ASN ASN A . n A 1 13 PRO 13 53 53 PRO PRO A . n A 1 14 ASN 14 54 54 ASN ASN A . n A 1 15 LYS 15 55 55 LYS LYS A . n A 1 16 PRO 16 56 56 PRO PRO A . n A 1 17 LYS 17 57 57 LYS LYS A . n A 1 18 ARG 18 58 58 ARG ARG A . n A 1 19 GLN 19 59 59 GLN GLN A . n A 1 20 THR 20 60 60 THR THR A . n A 1 21 ASN 21 61 61 ASN ASN A . n A 1 22 GLN 22 62 62 GLN GLN A . n A 1 23 LEU 23 63 63 LEU LEU A . n A 1 24 GLN 24 64 64 GLN GLN A . n A 1 25 TYR 25 65 65 TYR TYR A . n A 1 26 LEU 26 66 66 LEU LEU A . n A 1 27 LEU 27 67 67 LEU LEU A . n A 1 28 ARG 28 68 68 ARG ARG A . n A 1 29 VAL 29 69 69 VAL VAL A . n A 1 30 VAL 30 70 70 VAL VAL A . n A 1 31 LEU 31 71 71 LEU LEU A . n A 1 32 LYS 32 72 72 LYS LYS A . n A 1 33 THR 33 73 73 THR THR A . n A 1 34 LEU 34 74 74 LEU LEU A . n A 1 35 TRP 35 75 75 TRP TRP A . n A 1 36 LYS 36 76 76 LYS LYS A . n A 1 37 HIS 37 77 77 HIS HIS A . n A 1 38 GLN 38 78 78 GLN GLN A . n A 1 39 PHE 39 79 79 PHE PHE A . n A 1 40 ALA 40 80 80 ALA ALA A . n A 1 41 TRP 41 81 81 TRP TRP A . n A 1 42 PRO 42 82 82 PRO PRO A . n A 1 43 PHE 43 83 83 PHE PHE A . n A 1 44 GLN 44 84 84 GLN GLN A . n A 1 45 GLN 45 85 85 GLN GLN A . n A 1 46 PRO 46 86 86 PRO PRO A . n A 1 47 VAL 47 87 87 VAL VAL A . n A 1 48 ASP 48 88 88 ASP ASP A . n A 1 49 ALA 49 89 89 ALA ALA A . n A 1 50 VAL 50 90 90 VAL VAL A . n A 1 51 LYS 51 91 91 LYS LYS A . n A 1 52 LEU 52 92 92 LEU LEU A . n A 1 53 ASN 53 93 93 ASN ASN A . n A 1 54 LEU 54 94 94 LEU LEU A . n A 1 55 PRO 55 95 95 PRO PRO A . n A 1 56 ASP 56 96 96 ASP ASP A . n A 1 57 TYR 57 97 97 TYR TYR A . n A 1 58 TYR 58 98 98 TYR TYR A . n A 1 59 LYS 59 99 99 LYS LYS A . n A 1 60 ILE 60 100 100 ILE ILE A . n A 1 61 ILE 61 101 101 ILE ILE A . n A 1 62 LYS 62 102 102 LYS LYS A . n A 1 63 THR 63 103 103 THR THR A . n A 1 64 PRO 64 104 104 PRO PRO A . n A 1 65 MET 65 105 105 MET MET A . n A 1 66 ASP 66 106 106 ASP ASP A . n A 1 67 MET 67 107 107 MET MET A . n A 1 68 GLY 68 108 108 GLY GLY A . n A 1 69 THR 69 109 109 THR THR A . n A 1 70 ILE 70 110 110 ILE ILE A . n A 1 71 LYS 71 111 111 LYS LYS A . n A 1 72 LYS 72 112 112 LYS LYS A . n A 1 73 ARG 73 113 113 ARG ARG A . n A 1 74 LEU 74 114 114 LEU LEU A . n A 1 75 GLU 75 115 115 GLU GLU A . n A 1 76 ASN 76 116 116 ASN ASN A . n A 1 77 ASN 77 117 117 ASN ASN A . n A 1 78 TYR 78 118 118 TYR TYR A . n A 1 79 TYR 79 119 119 TYR TYR A . n A 1 80 TRP 80 120 120 TRP TRP A . n A 1 81 ASN 81 121 121 ASN ASN A . n A 1 82 ALA 82 122 122 ALA ALA A . n A 1 83 GLN 83 123 123 GLN GLN A . n A 1 84 GLU 84 124 124 GLU GLU A . n A 1 85 CYS 85 125 125 CYS CYS A . n A 1 86 ILE 86 126 126 ILE ILE A . n A 1 87 GLN 87 127 127 GLN GLN A . n A 1 88 ASP 88 128 128 ASP ASP A . n A 1 89 PHE 89 129 129 PHE PHE A . n A 1 90 ASN 90 130 130 ASN ASN A . n A 1 91 THR 91 131 131 THR THR A . n A 1 92 MET 92 132 132 MET MET A . n A 1 93 PHE 93 133 133 PHE PHE A . n A 1 94 THR 94 134 134 THR THR A . n A 1 95 ASN 95 135 135 ASN ASN A . n A 1 96 CYS 96 136 136 CYS CYS A . n A 1 97 TYR 97 137 137 TYR TYR A . n A 1 98 ILE 98 138 138 ILE ILE A . n A 1 99 TYR 99 139 139 TYR TYR A . n A 1 100 ASN 100 140 140 ASN ASN A . n A 1 101 LYS 101 141 141 LYS LYS A . n A 1 102 PRO 102 142 142 PRO PRO A . n A 1 103 GLY 103 143 143 GLY GLY A . n A 1 104 ASP 104 144 144 ASP ASP A . n A 1 105 ASP 105 145 145 ASP ASP A . n A 1 106 ILE 106 146 146 ILE ILE A . n A 1 107 VAL 107 147 147 VAL VAL A . n A 1 108 LEU 108 148 148 LEU LEU A . n A 1 109 MET 109 149 149 MET MET A . n A 1 110 ALA 110 150 150 ALA ALA A . n A 1 111 GLU 111 151 151 GLU GLU A . n A 1 112 ALA 112 152 152 ALA ALA A . n A 1 113 LEU 113 153 153 LEU LEU A . n A 1 114 GLU 114 154 154 GLU GLU A . n A 1 115 LYS 115 155 155 LYS LYS A . n A 1 116 LEU 116 156 156 LEU LEU A . n A 1 117 PHE 117 157 157 PHE PHE A . n A 1 118 LEU 118 158 158 LEU LEU A . n A 1 119 GLN 119 159 159 GLN GLN A . n A 1 120 LYS 120 160 160 LYS LYS A . n A 1 121 ILE 121 161 161 ILE ILE A . n A 1 122 ASN 122 162 162 ASN ASN A . n A 1 123 GLU 123 163 163 GLU GLU A . n A 1 124 LEU 124 164 164 LEU LEU A . n A 1 125 PRO 125 165 165 PRO PRO A . n A 1 126 THR 126 166 166 THR THR A . n A 1 127 GLU 127 167 167 GLU GLU A . n A 1 128 GLU 128 168 168 GLU GLU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GUJ 1 201 500 GUJ 157 A . C 3 EDO 1 202 1 EDO EDO A . D 4 HOH 1 301 3 HOH HOH A . D 4 HOH 2 302 159 HOH HOH A . D 4 HOH 3 303 53 HOH HOH A . D 4 HOH 4 304 21 HOH HOH A . D 4 HOH 5 305 5 HOH HOH A . D 4 HOH 6 306 92 HOH HOH A . D 4 HOH 7 307 145 HOH HOH A . D 4 HOH 8 308 37 HOH HOH A . D 4 HOH 9 309 152 HOH HOH A . D 4 HOH 10 310 108 HOH HOH A . D 4 HOH 11 311 157 HOH HOH A . D 4 HOH 12 312 147 HOH HOH A . D 4 HOH 13 313 66 HOH HOH A . D 4 HOH 14 314 64 HOH HOH A . D 4 HOH 15 315 131 HOH HOH A . D 4 HOH 16 316 73 HOH HOH A . D 4 HOH 17 317 62 HOH HOH A . D 4 HOH 18 318 26 HOH HOH A . D 4 HOH 19 319 99 HOH HOH A . D 4 HOH 20 320 42 HOH HOH A . D 4 HOH 21 321 102 HOH HOH A . D 4 HOH 22 322 85 HOH HOH A . D 4 HOH 23 323 14 HOH HOH A . D 4 HOH 24 324 146 HOH HOH A . D 4 HOH 25 325 11 HOH HOH A . D 4 HOH 26 326 130 HOH HOH A . D 4 HOH 27 327 133 HOH HOH A . D 4 HOH 28 328 49 HOH HOH A . D 4 HOH 29 329 20 HOH HOH A . D 4 HOH 30 330 89 HOH HOH A . D 4 HOH 31 331 129 HOH HOH A . D 4 HOH 32 332 22 HOH HOH A . D 4 HOH 33 333 127 HOH HOH A . D 4 HOH 34 334 149 HOH HOH A . D 4 HOH 35 335 95 HOH HOH A . D 4 HOH 36 336 47 HOH HOH A . D 4 HOH 37 337 56 HOH HOH A . D 4 HOH 38 338 39 HOH HOH A . D 4 HOH 39 339 141 HOH HOH A . D 4 HOH 40 340 13 HOH HOH A . D 4 HOH 41 341 48 HOH HOH A . D 4 HOH 42 342 4 HOH HOH A . D 4 HOH 43 343 74 HOH HOH A . D 4 HOH 44 344 30 HOH HOH A . D 4 HOH 45 345 2 HOH HOH A . D 4 HOH 46 346 59 HOH HOH A . D 4 HOH 47 347 151 HOH HOH A . D 4 HOH 48 348 12 HOH HOH A . D 4 HOH 49 349 140 HOH HOH A . D 4 HOH 50 350 15 HOH HOH A . D 4 HOH 51 351 158 HOH HOH A . D 4 HOH 52 352 72 HOH HOH A . D 4 HOH 53 353 24 HOH HOH A . D 4 HOH 54 354 123 HOH HOH A . D 4 HOH 55 355 34 HOH HOH A . D 4 HOH 56 356 110 HOH HOH A . D 4 HOH 57 357 57 HOH HOH A . D 4 HOH 58 358 25 HOH HOH A . D 4 HOH 59 359 16 HOH HOH A . D 4 HOH 60 360 90 HOH HOH A . D 4 HOH 61 361 93 HOH HOH A . D 4 HOH 62 362 106 HOH HOH A . D 4 HOH 63 363 51 HOH HOH A . D 4 HOH 64 364 18 HOH HOH A . D 4 HOH 65 365 32 HOH HOH A . D 4 HOH 66 366 134 HOH HOH A . D 4 HOH 67 367 28 HOH HOH A . D 4 HOH 68 368 116 HOH HOH A . D 4 HOH 69 369 8 HOH HOH A . D 4 HOH 70 370 23 HOH HOH A . D 4 HOH 71 371 126 HOH HOH A . D 4 HOH 72 372 17 HOH HOH A . D 4 HOH 73 373 100 HOH HOH A . D 4 HOH 74 374 35 HOH HOH A . D 4 HOH 75 375 77 HOH HOH A . D 4 HOH 76 376 45 HOH HOH A . D 4 HOH 77 377 7 HOH HOH A . D 4 HOH 78 378 103 HOH HOH A . D 4 HOH 79 379 105 HOH HOH A . D 4 HOH 80 380 88 HOH HOH A . D 4 HOH 81 381 117 HOH HOH A . D 4 HOH 82 382 136 HOH HOH A . D 4 HOH 83 383 1 HOH HOH A . D 4 HOH 84 384 80 HOH HOH A . D 4 HOH 85 385 9 HOH HOH A . D 4 HOH 86 386 10 HOH HOH A . D 4 HOH 87 387 27 HOH HOH A . D 4 HOH 88 388 119 HOH HOH A . D 4 HOH 89 389 135 HOH HOH A . D 4 HOH 90 390 50 HOH HOH A . D 4 HOH 91 391 153 HOH HOH A . D 4 HOH 92 392 118 HOH HOH A . D 4 HOH 93 393 82 HOH HOH A . D 4 HOH 94 394 31 HOH HOH A . D 4 HOH 95 395 6 HOH HOH A . D 4 HOH 96 396 114 HOH HOH A . D 4 HOH 97 397 41 HOH HOH A . D 4 HOH 98 398 120 HOH HOH A . D 4 HOH 99 399 86 HOH HOH A . D 4 HOH 100 400 29 HOH HOH A . D 4 HOH 101 401 52 HOH HOH A . D 4 HOH 102 402 122 HOH HOH A . D 4 HOH 103 403 160 HOH HOH A . D 4 HOH 104 404 137 HOH HOH A . D 4 HOH 105 405 68 HOH HOH A . D 4 HOH 106 406 55 HOH HOH A . D 4 HOH 107 407 63 HOH HOH A . D 4 HOH 108 408 33 HOH HOH A . D 4 HOH 109 409 87 HOH HOH A . D 4 HOH 110 410 61 HOH HOH A . D 4 HOH 111 411 143 HOH HOH A . D 4 HOH 112 412 138 HOH HOH A . D 4 HOH 113 413 70 HOH HOH A . D 4 HOH 114 414 65 HOH HOH A . D 4 HOH 115 415 75 HOH HOH A . D 4 HOH 116 416 84 HOH HOH A . D 4 HOH 117 417 44 HOH HOH A . D 4 HOH 118 418 109 HOH HOH A . D 4 HOH 119 419 81 HOH HOH A . D 4 HOH 120 420 71 HOH HOH A . D 4 HOH 121 421 69 HOH HOH A . D 4 HOH 122 422 54 HOH HOH A . D 4 HOH 123 423 155 HOH HOH A . D 4 HOH 124 424 113 HOH HOH A . D 4 HOH 125 425 58 HOH HOH A . D 4 HOH 126 426 161 HOH HOH A . D 4 HOH 127 427 107 HOH HOH A . D 4 HOH 128 428 43 HOH HOH A . D 4 HOH 129 429 112 HOH HOH A . D 4 HOH 130 430 78 HOH HOH A . D 4 HOH 131 431 121 HOH HOH A . D 4 HOH 132 432 38 HOH HOH A . D 4 HOH 133 433 46 HOH HOH A . D 4 HOH 134 434 76 HOH HOH A . D 4 HOH 135 435 132 HOH HOH A . D 4 HOH 136 436 128 HOH HOH A . D 4 HOH 137 437 142 HOH HOH A . D 4 HOH 138 438 148 HOH HOH A . D 4 HOH 139 439 125 HOH HOH A . D 4 HOH 140 440 91 HOH HOH A . D 4 HOH 141 441 97 HOH HOH A . D 4 HOH 142 442 115 HOH HOH A . D 4 HOH 143 443 79 HOH HOH A . D 4 HOH 144 444 124 HOH HOH A . D 4 HOH 145 445 67 HOH HOH A . D 4 HOH 146 446 98 HOH HOH A . D 4 HOH 147 447 104 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2019-04-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 11.5408 _pdbx_refine_tls.origin_y -3.0734 _pdbx_refine_tls.origin_z -9.0600 _pdbx_refine_tls.T[1][1] -0.0398 _pdbx_refine_tls.T[2][2] -0.0508 _pdbx_refine_tls.T[3][3] -0.0131 _pdbx_refine_tls.T[1][2] -0.0057 _pdbx_refine_tls.T[1][3] 0.0366 _pdbx_refine_tls.T[2][3] 0.0013 _pdbx_refine_tls.L[1][1] 0.7633 _pdbx_refine_tls.L[2][2] 1.3874 _pdbx_refine_tls.L[3][3] 2.4936 _pdbx_refine_tls.L[1][2] -0.4799 _pdbx_refine_tls.L[1][3] -0.4105 _pdbx_refine_tls.L[2][3] 0.5992 _pdbx_refine_tls.S[1][1] -0.1070 _pdbx_refine_tls.S[2][2] -0.0491 _pdbx_refine_tls.S[3][3] 0.1560 _pdbx_refine_tls.S[1][2] -0.0073 _pdbx_refine_tls.S[1][3] -0.0908 _pdbx_refine_tls.S[2][3] 0.1525 _pdbx_refine_tls.S[2][1] 0.0522 _pdbx_refine_tls.S[3][1] 0.2083 _pdbx_refine_tls.S[3][2] -0.0566 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 41 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 168 _pdbx_refine_tls_group.selection_details '{ A|* }' _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? # _phasing.method MR # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? 'Zbyszek Otwinowski' hkl@hkl-xray.com ? ? ? ? ? http://www.hkl-xray.com/ ? HKL-2000 ? ? package . 1 ? 'data scaling' ? ? 'Zbyszek Otwinowski' hkl@hkl-xray.com ? ? ? ? ? http://www.hkl-xray.com/ ? HKL-2000 ? ? package . 2 ? phasing ? ? 'Alexei Vaguine' alexei@ysbl.york.ac.uk ? ? ? ? Fortran_77 http://www.ccp4.ac.uk/dist/html/molrep.html ? MOLREP ? ? program . 3 ? refinement ? ? 'Gerard Bricogne' buster-develop@GlobalPhasing.com ? ? ? ? ? http://www.globalphasing.com/buster/ ? BUSTER ? ? program 2.10.3 4 ? 'data extraction' ? ? PDB deposit@deposit.rcsb.org 'Sep. 1, 2017' ? ? ? C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ ? PDB_EXTRACT ? ? package 3.24 5 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 117 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 38.58 _pdbx_validate_torsion.psi 72.23 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASN 42 ? CG ? A ASN 2 CG 2 1 Y 1 A ASN 42 ? OD1 ? A ASN 2 OD1 3 1 Y 1 A ASN 42 ? ND2 ? A ASN 2 ND2 4 1 Y 1 A LYS 72 ? CG ? A LYS 32 CG 5 1 Y 1 A LYS 72 ? CD ? A LYS 32 CD 6 1 Y 1 A LYS 72 ? CE ? A LYS 32 CE 7 1 Y 1 A LYS 72 ? NZ ? A LYS 32 NZ 8 1 Y 1 A ASN 116 ? CG ? A ASN 76 CG 9 1 Y 1 A ASN 116 ? OD1 ? A ASN 76 OD1 10 1 Y 1 A ASN 116 ? ND2 ? A ASN 76 ND2 11 1 Y 1 A ASN 117 ? CG ? A ASN 77 CG 12 1 Y 1 A ASN 117 ? OD1 ? A ASN 77 OD1 13 1 Y 1 A ASN 117 ? ND2 ? A ASN 77 ND2 14 1 Y 1 A GLN 123 ? CG ? A GLN 83 CG 15 1 Y 1 A GLN 123 ? CD ? A GLN 83 CD 16 1 Y 1 A GLN 123 ? OE1 ? A GLN 83 OE1 17 1 Y 1 A GLN 123 ? NE2 ? A GLN 83 NE2 18 1 Y 1 A GLN 159 ? CG ? A GLN 119 CG 19 1 Y 1 A GLN 159 ? CD ? A GLN 119 CD 20 1 Y 1 A GLN 159 ? OE1 ? A GLN 119 OE1 21 1 Y 1 A GLN 159 ? NE2 ? A GLN 119 NE2 22 1 Y 1 A GLU 163 ? CG ? A GLU 123 CG 23 1 Y 1 A GLU 163 ? CD ? A GLU 123 CD 24 1 Y 1 A GLU 163 ? OE1 ? A GLU 123 OE1 25 1 Y 1 A GLU 163 ? OE2 ? A GLU 123 OE2 26 1 Y 1 A GLU 168 ? CG ? A GLU 128 CG 27 1 Y 1 A GLU 168 ? CD ? A GLU 128 CD 28 1 Y 1 A GLU 168 ? OE1 ? A GLU 128 OE1 29 1 Y 1 A GLU 168 ? OE2 ? A GLU 128 OE2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '3-benzyl-2,9-dimethyl-4H,6H-thieno[2,3-e][1,2,4]triazolo[3,4-c][1,4]oxazepine' GUJ 3 1,2-ETHANEDIOL EDO 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #