HEADER SIGNALING PROTEIN 04-JUN-18 6DLX TITLE FTSY-NG DOMAIN BOUND TO FRAGMENT 3. COMPND MOL_ID: 1; COMPND 2 MOLECULE: SIGNAL RECOGNITION PARTICLE RECEPTOR FTSY; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SRP RECEPTOR; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: FTSY, BK409_14805; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS SRP, SR RECEPTOR, FTSY, FBDD, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR F.S.ATAIDE,C.FAORO REVDAT 2 11-OCT-23 6DLX 1 REMARK REVDAT 1 22-AUG-18 6DLX 0 JRNL AUTH C.FAORO,L.WILKINSON-WHITE,A.H.KWAN,S.F.ATAIDE JRNL TITL DISCOVERY OF FRAGMENTS THAT TARGET KEY INTERACTIONS IN THE JRNL TITL 2 SIGNAL RECOGNITION PARTICLE (SRP) AS POTENTIAL LEADS FOR A JRNL TITL 3 NEW CLASS OF ANTIBIOTICS. JRNL REF PLOS ONE V. 13 00387 2018 JRNL REFN ESSN 1932-6203 JRNL PMID 30044812 JRNL DOI 10.1371/JOURNAL.PONE.0200387 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.99 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 7.520 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 47444 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.950 REMARK 3 FREE R VALUE TEST SET COUNT : 2331 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.9684 - 4.7456 0.93 2689 179 0.1614 0.2275 REMARK 3 2 4.7456 - 3.7709 0.96 2698 114 0.1315 0.1902 REMARK 3 3 3.7709 - 3.2955 0.94 2663 162 0.1649 0.2245 REMARK 3 4 3.2955 - 2.9947 0.94 2634 158 0.1975 0.2489 REMARK 3 5 2.9947 - 2.7804 0.94 2646 154 0.2175 0.2423 REMARK 3 6 2.7804 - 2.6166 0.96 2660 114 0.2235 0.2979 REMARK 3 7 2.6166 - 2.4857 0.95 2673 132 0.2336 0.3038 REMARK 3 8 2.4857 - 2.3776 0.95 2669 138 0.2353 0.2918 REMARK 3 9 2.3776 - 2.2861 0.95 2632 128 0.2467 0.2879 REMARK 3 10 2.2861 - 2.2073 0.95 2666 138 0.2533 0.2543 REMARK 3 11 2.2073 - 2.1383 0.95 2607 116 0.2485 0.3193 REMARK 3 12 2.1383 - 2.0772 0.95 2691 140 0.2639 0.2743 REMARK 3 13 2.0772 - 2.0225 0.96 2623 102 0.2761 0.3364 REMARK 3 14 2.0225 - 1.9732 0.94 2646 151 0.2817 0.2880 REMARK 3 15 1.9732 - 1.9284 0.95 2642 127 0.2854 0.3591 REMARK 3 16 1.9284 - 1.8874 0.94 2619 133 0.3226 0.3783 REMARK 3 17 1.8874 - 1.8496 0.94 2615 145 0.3273 0.3304 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 36.330 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 4725 REMARK 3 ANGLE : 0.553 6360 REMARK 3 CHIRALITY : 0.038 740 REMARK 3 PLANARITY : 0.004 818 REMARK 3 DIHEDRAL : 14.095 2882 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 195 THROUGH 373 ) REMARK 3 ORIGIN FOR THE GROUP (A): 47.8503 -11.2500 38.7191 REMARK 3 T TENSOR REMARK 3 T11: 0.4297 T22: 0.0328 REMARK 3 T33: 0.2335 T12: 0.0023 REMARK 3 T13: -0.0510 T23: 0.0133 REMARK 3 L TENSOR REMARK 3 L11: 0.1483 L22: 0.5491 REMARK 3 L33: 0.1050 L12: 0.0416 REMARK 3 L13: -0.0275 L23: 0.0146 REMARK 3 S TENSOR REMARK 3 S11: -0.0103 S12: -0.0138 S13: -0.0571 REMARK 3 S21: -0.1464 S22: -0.0381 S23: -0.0225 REMARK 3 S31: -0.0270 S32: -0.0080 S33: -0.0900 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 374 THROUGH 438 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.8030 4.5508 43.4728 REMARK 3 T TENSOR REMARK 3 T11: 0.3624 T22: 0.0664 REMARK 3 T33: 0.2138 T12: 0.0039 REMARK 3 T13: -0.0361 T23: -0.0089 REMARK 3 L TENSOR REMARK 3 L11: 0.5380 L22: 1.3138 REMARK 3 L33: 0.0383 L12: -0.4119 REMARK 3 L13: 0.0089 L23: 0.1503 REMARK 3 S TENSOR REMARK 3 S11: -0.0227 S12: -0.0682 S13: 0.1203 REMARK 3 S21: 0.2565 S22: 0.0226 S23: 0.0889 REMARK 3 S31: -0.0582 S32: -0.0162 S33: -0.0507 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 439 THROUGH 494 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.4189 -13.3947 37.0380 REMARK 3 T TENSOR REMARK 3 T11: 0.3195 T22: 0.0629 REMARK 3 T33: 0.2151 T12: 0.0103 REMARK 3 T13: -0.0534 T23: -0.0278 REMARK 3 L TENSOR REMARK 3 L11: 0.4323 L22: 1.0867 REMARK 3 L33: 0.1214 L12: 0.0730 REMARK 3 L13: -0.1357 L23: 0.2696 REMARK 3 S TENSOR REMARK 3 S11: 0.0096 S12: -0.0067 S13: -0.0442 REMARK 3 S21: -0.0216 S22: -0.0168 S23: -0.0573 REMARK 3 S31: 0.0585 S32: 0.0133 S33: -0.0055 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 195 THROUGH 282 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.7911 -10.8190 11.3600 REMARK 3 T TENSOR REMARK 3 T11: 0.4606 T22: 0.0902 REMARK 3 T33: 0.2855 T12: 0.0248 REMARK 3 T13: -0.0248 T23: 0.0203 REMARK 3 L TENSOR REMARK 3 L11: 0.1032 L22: 1.0188 REMARK 3 L33: 0.2691 L12: -0.1931 REMARK 3 L13: 0.0506 L23: -0.2142 REMARK 3 S TENSOR REMARK 3 S11: -0.0458 S12: 0.0179 S13: 0.1103 REMARK 3 S21: 0.0441 S22: -0.0123 S23: 0.1052 REMARK 3 S31: -0.1123 S32: -0.0132 S33: -0.0148 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 283 THROUGH 373 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.0253 -46.9089 18.7508 REMARK 3 T TENSOR REMARK 3 T11: 0.2966 T22: 0.0824 REMARK 3 T33: 0.2262 T12: 0.0031 REMARK 3 T13: 0.0063 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 0.2746 L22: 0.6515 REMARK 3 L33: 0.5413 L12: -0.0757 REMARK 3 L13: 0.0417 L23: 0.1580 REMARK 3 S TENSOR REMARK 3 S11: 0.0769 S12: 0.0141 S13: -0.1124 REMARK 3 S21: -0.0368 S22: -0.0110 S23: 0.0189 REMARK 3 S31: -0.0276 S32: 0.0673 S33: -0.0141 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 374 THROUGH 413 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.7313 -50.0519 12.9324 REMARK 3 T TENSOR REMARK 3 T11: 0.3389 T22: 0.0560 REMARK 3 T33: 0.2678 T12: -0.0098 REMARK 3 T13: -0.0133 T23: 0.0017 REMARK 3 L TENSOR REMARK 3 L11: 0.7025 L22: 1.4482 REMARK 3 L33: 0.3442 L12: 0.0651 REMARK 3 L13: 0.1834 L23: 0.2830 REMARK 3 S TENSOR REMARK 3 S11: -0.0304 S12: 0.0928 S13: -0.0338 REMARK 3 S21: -0.3159 S22: -0.0056 S23: 0.0982 REMARK 3 S31: 0.0052 S32: -0.0120 S33: 0.0443 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 414 THROUGH 494 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.5946 -29.1547 14.2792 REMARK 3 T TENSOR REMARK 3 T11: 0.3652 T22: 0.0678 REMARK 3 T33: 0.2204 T12: -0.0091 REMARK 3 T13: -0.0110 T23: 0.0080 REMARK 3 L TENSOR REMARK 3 L11: 0.4242 L22: 1.3244 REMARK 3 L33: 0.0488 L12: -0.3385 REMARK 3 L13: -0.0897 L23: -0.1056 REMARK 3 S TENSOR REMARK 3 S11: 0.0133 S12: 0.0124 S13: -0.0175 REMARK 3 S21: -0.0294 S22: -0.0125 S23: 0.0557 REMARK 3 S31: -0.0796 S32: 0.0123 S33: 0.0252 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6DLX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1000233538. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-MAR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95370 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47444 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.848 REMARK 200 RESOLUTION RANGE LOW (A) : 43.991 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.02800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.91 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6CQP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS PH 5.8, 25% PEG 3350, REMARK 280 165 MM AMMONIUM ACETATE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 297.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.01000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 495 REMARK 465 GLU A 496 REMARK 465 ASP A 497 REMARK 465 ARG B 495 REMARK 465 GLU B 496 REMARK 465 ASP B 497 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 609 O HOH A 634 2.02 REMARK 500 O HOH A 686 O HOH A 689 2.03 REMARK 500 O HOH A 604 O HOH A 686 2.03 REMARK 500 O HOH A 636 O HOH A 688 2.04 REMARK 500 O HOH A 672 O HOH A 687 2.05 REMARK 500 O HOH A 655 O HOH A 676 2.09 REMARK 500 O HOH B 656 O HOH B 711 2.10 REMARK 500 O HOH A 695 O HOH A 706 2.11 REMARK 500 O HOH B 625 O HOH B 706 2.12 REMARK 500 O HOH A 682 O HOH A 707 2.12 REMARK 500 O HOH B 704 O HOH B 717 2.13 REMARK 500 O HOH A 673 O HOH A 682 2.13 REMARK 500 O HOH B 635 O HOH B 719 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 702 O HOH B 671 1655 2.04 REMARK 500 O HOH A 639 O HOH B 670 1655 2.09 REMARK 500 O HOH B 627 O HOH B 722 1655 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 260 52.76 39.02 REMARK 500 ASP A 283 65.65 -106.60 REMARK 500 ASN A 389 79.22 55.49 REMARK 500 ASP B 283 63.44 -104.99 REMARK 500 ASN B 389 77.12 61.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 716 DISTANCE = 6.66 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GXY A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GXY A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NH4 A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NH4 A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NH4 A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NH4 A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NH4 A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NH4 A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NH4 A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NH4 A 510 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 511 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GXY B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GXY B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NH4 B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NH4 B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NH4 B 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NH4 B 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NH4 B 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NH4 B 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NH4 B 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NH4 B 510 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NH4 B 511 DBREF1 6DLX A 196 497 UNP A0A1M2TDP9_ECOLX DBREF2 6DLX A A0A1M2TDP9 196 497 DBREF1 6DLX B 196 497 UNP A0A1M2TDP9_ECOLX DBREF2 6DLX B A0A1M2TDP9 196 497 SEQADV 6DLX GLY A 195 UNP A0A1M2TDP EXPRESSION TAG SEQADV 6DLX GLY B 195 UNP A0A1M2TDP EXPRESSION TAG SEQRES 1 A 303 GLY PHE ALA ARG LEU LYS ARG SER LEU LEU LYS THR LYS SEQRES 2 A 303 GLU ASN LEU GLY SER GLY PHE ILE SER LEU PHE ARG GLY SEQRES 3 A 303 LYS LYS ILE ASP ASP ASP LEU PHE GLU GLU LEU GLU GLU SEQRES 4 A 303 GLN LEU LEU ILE ALA ASP VAL GLY VAL GLU THR THR ARG SEQRES 5 A 303 LYS ILE ILE THR ASN LEU THR GLU GLY ALA SER ARG LYS SEQRES 6 A 303 GLN LEU ARG ASP ALA GLU ALA LEU TYR GLY LEU LEU LYS SEQRES 7 A 303 GLU GLU MET GLY GLU ILE LEU ALA LYS VAL ASP GLU PRO SEQRES 8 A 303 LEU ASN VAL GLU GLY LYS ALA PRO PHE VAL ILE LEU MET SEQRES 9 A 303 VAL GLY VAL ASN GLY VAL GLY LYS THR THR THR ILE GLY SEQRES 10 A 303 LYS LEU ALA ARG GLN PHE GLU GLN GLN GLY LYS SER VAL SEQRES 11 A 303 MET LEU ALA ALA GLY ASP THR PHE ARG ALA ALA ALA VAL SEQRES 12 A 303 GLU GLN LEU GLN VAL TRP GLY GLN ARG ASN ASN ILE PRO SEQRES 13 A 303 VAL ILE ALA GLN HIS THR GLY ALA ASP SER ALA SER VAL SEQRES 14 A 303 ILE PHE ASP ALA ILE GLN ALA ALA LYS ALA ARG ASN ILE SEQRES 15 A 303 ASP VAL LEU ILE ALA ASP THR ALA GLY ARG LEU GLN ASN SEQRES 16 A 303 LYS SER HIS LEU MET GLU GLU LEU LYS LYS ILE VAL ARG SEQRES 17 A 303 VAL MET LYS LYS LEU ASP VAL GLU ALA PRO HIS GLU VAL SEQRES 18 A 303 MET LEU THR ILE ASP ALA SER THR GLY GLN ASN ALA VAL SEQRES 19 A 303 SER GLN ALA LYS LEU PHE HIS GLU ALA VAL GLY LEU THR SEQRES 20 A 303 GLY ILE THR LEU THR LYS LEU ASP GLY THR ALA LYS GLY SEQRES 21 A 303 GLY VAL ILE PHE SER VAL ALA ASP GLN PHE GLY ILE PRO SEQRES 22 A 303 ILE ARG TYR ILE GLY VAL GLY GLU ARG ILE GLU ASP LEU SEQRES 23 A 303 ARG PRO PHE LYS ALA ASP ASP PHE ILE GLU ALA LEU PHE SEQRES 24 A 303 ALA ARG GLU ASP SEQRES 1 B 303 GLY PHE ALA ARG LEU LYS ARG SER LEU LEU LYS THR LYS SEQRES 2 B 303 GLU ASN LEU GLY SER GLY PHE ILE SER LEU PHE ARG GLY SEQRES 3 B 303 LYS LYS ILE ASP ASP ASP LEU PHE GLU GLU LEU GLU GLU SEQRES 4 B 303 GLN LEU LEU ILE ALA ASP VAL GLY VAL GLU THR THR ARG SEQRES 5 B 303 LYS ILE ILE THR ASN LEU THR GLU GLY ALA SER ARG LYS SEQRES 6 B 303 GLN LEU ARG ASP ALA GLU ALA LEU TYR GLY LEU LEU LYS SEQRES 7 B 303 GLU GLU MET GLY GLU ILE LEU ALA LYS VAL ASP GLU PRO SEQRES 8 B 303 LEU ASN VAL GLU GLY LYS ALA PRO PHE VAL ILE LEU MET SEQRES 9 B 303 VAL GLY VAL ASN GLY VAL GLY LYS THR THR THR ILE GLY SEQRES 10 B 303 LYS LEU ALA ARG GLN PHE GLU GLN GLN GLY LYS SER VAL SEQRES 11 B 303 MET LEU ALA ALA GLY ASP THR PHE ARG ALA ALA ALA VAL SEQRES 12 B 303 GLU GLN LEU GLN VAL TRP GLY GLN ARG ASN ASN ILE PRO SEQRES 13 B 303 VAL ILE ALA GLN HIS THR GLY ALA ASP SER ALA SER VAL SEQRES 14 B 303 ILE PHE ASP ALA ILE GLN ALA ALA LYS ALA ARG ASN ILE SEQRES 15 B 303 ASP VAL LEU ILE ALA ASP THR ALA GLY ARG LEU GLN ASN SEQRES 16 B 303 LYS SER HIS LEU MET GLU GLU LEU LYS LYS ILE VAL ARG SEQRES 17 B 303 VAL MET LYS LYS LEU ASP VAL GLU ALA PRO HIS GLU VAL SEQRES 18 B 303 MET LEU THR ILE ASP ALA SER THR GLY GLN ASN ALA VAL SEQRES 19 B 303 SER GLN ALA LYS LEU PHE HIS GLU ALA VAL GLY LEU THR SEQRES 20 B 303 GLY ILE THR LEU THR LYS LEU ASP GLY THR ALA LYS GLY SEQRES 21 B 303 GLY VAL ILE PHE SER VAL ALA ASP GLN PHE GLY ILE PRO SEQRES 22 B 303 ILE ARG TYR ILE GLY VAL GLY GLU ARG ILE GLU ASP LEU SEQRES 23 B 303 ARG PRO PHE LYS ALA ASP ASP PHE ILE GLU ALA LEU PHE SEQRES 24 B 303 ALA ARG GLU ASP HET GXY A 501 22 HET GXY A 502 22 HET NH4 A 503 5 HET NH4 A 504 5 HET NH4 A 505 5 HET NH4 A 506 5 HET NH4 A 507 5 HET NH4 A 508 5 HET NH4 A 509 5 HET NH4 A 510 5 HET PEG A 511 17 HET GXY B 501 22 HET GXY B 502 22 HET NH4 B 503 5 HET NH4 B 504 5 HET NH4 B 505 5 HET NH4 B 506 5 HET NH4 B 507 5 HET NH4 B 508 5 HET NH4 B 509 5 HET NH4 B 510 5 HET NH4 B 511 5 HETNAM GXY 4-BROMO-2,5-DIMETHOXYANILINE HETNAM NH4 AMMONIUM ION HETNAM PEG DI(HYDROXYETHYL)ETHER FORMUL 3 GXY 4(C8 H10 BR N O2) FORMUL 5 NH4 17(H4 N 1+) FORMUL 13 PEG C4 H10 O3 FORMUL 25 HOH *243(H2 O) HELIX 1 AA1 GLY A 195 LEU A 203 1 9 HELIX 2 AA2 LEU A 203 GLU A 208 1 6 HELIX 3 AA3 ASN A 209 GLY A 213 5 5 HELIX 4 AA4 PHE A 214 ARG A 219 1 6 HELIX 5 AA5 ASP A 224 ALA A 238 1 15 HELIX 6 AA6 GLY A 241 GLN A 260 1 20 HELIX 7 AA7 ASP A 263 GLU A 265 5 3 HELIX 8 AA8 ALA A 266 LYS A 281 1 16 HELIX 9 AA9 GLY A 305 GLN A 320 1 16 HELIX 10 AB1 ARG A 333 ASN A 347 1 15 HELIX 11 AB2 ASP A 359 ARG A 374 1 16 HELIX 12 AB3 ASN A 389 ASP A 408 1 20 HELIX 13 AB4 GLY A 424 GLY A 439 1 16 HELIX 14 AB5 GLY A 455 GLY A 465 1 11 HELIX 15 AB6 LYS A 484 PHE A 493 1 10 HELIX 16 AB7 PHE B 196 LEU B 203 1 8 HELIX 17 AB8 LEU B 203 GLU B 208 1 6 HELIX 18 AB9 LEU B 210 GLY B 213 5 4 HELIX 19 AC1 PHE B 214 ARG B 219 1 6 HELIX 20 AC2 ASP B 224 ALA B 238 1 15 HELIX 21 AC3 GLY B 241 GLN B 260 1 20 HELIX 22 AC4 ASP B 263 GLU B 265 5 3 HELIX 23 AC5 ALA B 266 LYS B 281 1 16 HELIX 24 AC6 GLY B 305 GLN B 320 1 16 HELIX 25 AC7 ARG B 333 ASN B 348 1 16 HELIX 26 AC8 ASP B 359 ARG B 374 1 16 HELIX 27 AC9 ASN B 389 ASP B 408 1 20 HELIX 28 AD1 GLY B 424 VAL B 438 1 15 HELIX 29 AD2 ALA B 452 GLY B 454 5 3 HELIX 30 AD3 GLY B 455 GLY B 465 1 11 HELIX 31 AD4 LYS B 484 PHE B 493 1 10 SHEET 1 AA1 8 VAL A 351 ILE A 352 0 SHEET 2 AA1 8 VAL A 324 ALA A 327 1 N LEU A 326 O ILE A 352 SHEET 3 AA1 8 VAL A 378 ALA A 381 1 O ILE A 380 N MET A 325 SHEET 4 AA1 8 PHE A 294 VAL A 299 1 N ILE A 296 O ALA A 381 SHEET 5 AA1 8 GLU A 414 ASP A 420 1 O GLU A 414 N LEU A 297 SHEET 6 AA1 8 GLY A 442 THR A 446 1 O THR A 444 N LEU A 417 SHEET 7 AA1 8 ILE A 468 GLY A 472 1 O GLY A 472 N LEU A 445 SHEET 8 AA1 8 LEU A 480 PRO A 482 -1 O ARG A 481 N ILE A 471 SHEET 1 AA2 8 VAL B 351 ILE B 352 0 SHEET 2 AA2 8 VAL B 324 ALA B 327 1 N LEU B 326 O ILE B 352 SHEET 3 AA2 8 VAL B 378 ALA B 381 1 O ILE B 380 N MET B 325 SHEET 4 AA2 8 PHE B 294 VAL B 299 1 N ILE B 296 O ALA B 381 SHEET 5 AA2 8 GLU B 414 ASP B 420 1 O GLU B 414 N LEU B 297 SHEET 6 AA2 8 GLY B 442 THR B 446 1 O THR B 446 N ILE B 419 SHEET 7 AA2 8 ILE B 468 GLY B 472 1 O GLY B 472 N LEU B 445 SHEET 8 AA2 8 LEU B 480 PRO B 482 -1 O ARG B 481 N ILE B 471 CISPEP 1 ALA A 292 PRO A 293 0 -4.84 CISPEP 2 ALA A 411 PRO A 412 0 -1.83 CISPEP 3 ALA B 292 PRO B 293 0 -5.06 CISPEP 4 ALA B 411 PRO B 412 0 -1.24 SITE 1 AC1 2 ASP A 359 LYS A 406 SITE 1 AC2 7 THR A 307 THR A 308 GLY A 311 LYS A 312 SITE 2 AC2 7 GLN A 339 TRP A 343 ARG A 346 SITE 1 AC3 3 ARG A 219 GLU A 265 HOH A 644 SITE 1 AC4 1 TYR B 268 SITE 1 AC5 3 GLY A 195 ALA A 197 ARG A 198 SITE 1 AC6 3 GLN A 354 ASP A 366 HOH A 658 SITE 1 AC7 5 VAL A 299 GLY A 300 THR A 383 ALA A 384 SITE 2 AC7 5 PHE A 434 SITE 1 AC8 3 ALA A 328 ASP A 330 ASP A 382 SITE 1 AC9 3 GLY A 357 ALA A 358 ASP A 359 SITE 1 AD1 4 MET A 298 VAL A 299 MET A 416 THR A 418 SITE 1 AD2 3 TYR A 268 ALA A 494 GLN B 319 SITE 1 AD3 4 ASP B 359 LYS B 399 VAL B 403 LYS B 406 SITE 1 AD4 5 THR B 307 GLY B 311 GLN B 339 LEU B 340 SITE 2 AD4 5 TRP B 343 SITE 1 AD5 4 PRO B 293 LYS B 372 ASP B 408 HIS B 413 SITE 1 AD6 4 ALA B 328 ALA B 353 GLN B 354 HOH B 649 SITE 1 AD7 1 SER B 257 SITE 1 AD8 2 ILE B 352 ALA B 353 SITE 1 AD9 4 ASN B 348 ILE B 349 PRO B 350 HOH B 661 SITE 1 AE1 5 GLY B 303 VAL B 304 GLY B 305 HOH B 602 SITE 2 AE1 5 HOH B 674 SITE 1 AE2 2 GLN B 369 HOH B 654 SITE 1 AE3 5 GLY B 300 VAL B 301 THR B 418 ILE B 419 SITE 2 AE3 5 GLN B 430 SITE 1 AE4 3 ASP B 420 THR B 423 GLN B 430 CRYST1 34.451 76.020 107.882 90.00 90.41 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.029027 0.000000 0.000208 0.00000 SCALE2 0.000000 0.013154 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009270 0.00000