HEADER HYDROLASE/DNA/RNA 09-JUN-18 6DPC TITLE CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 IN COMPLEX TITLE 2 WITH AN RNA/DNA HYBRID: REACTION IN 12 MM MN2+ AND 200 MM K+ FOR 40 S TITLE 3 AT 21 C COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBONUCLEASE H; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RNASE H; COMPND 5 EC: 3.1.26.4; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: RNA (5'-R(*AP*CP*AP*U)-3'); COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: RNA (5'-R(P*CP*G)-3'); COMPND 13 CHAIN: b; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 4; COMPND 16 MOLECULE: DNA (5'-D(*CP*GP*AP*TP*GP*T)-3'); COMPND 17 CHAIN: C; COMPND 18 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS HALODURANS (STRAIN ATCC BAA-125 / DSM SOURCE 3 18197 / FERM 7344 / JCM 9153 / C-125); SOURCE 4 ORGANISM_TAXID: 272558; SOURCE 5 STRAIN: ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125; SOURCE 6 GENE: RNHA, BH0863; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET15B; SOURCE 12 MOL_ID: 2; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: SYNTHETIC; SOURCE 15 ORGANISM_TAXID: 32630; SOURCE 16 MOL_ID: 3; SOURCE 17 SYNTHETIC: YES; SOURCE 18 ORGANISM_SCIENTIFIC: SYNTHETIC; SOURCE 19 ORGANISM_TAXID: 32630; SOURCE 20 MOL_ID: 4; SOURCE 21 SYNTHETIC: YES; SOURCE 22 ORGANISM_SCIENTIFIC: SYNTHETIC; SOURCE 23 ORGANISM_TAXID: 32630 KEYWDS PROTEIN-RNA-DNA COMPLEX, DOUBLE HELIX, RNA HYDROLYSIS, IN CRYSTALLO KEYWDS 2 CATALYSIS, METAL DEPENDENT CATALYSIS, MONOVALENT CATIONS, DIVALENT KEYWDS 3 CATIONS, HYDROLASE-DNA-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR N.L.SAMARA,W.YANG REVDAT 2 11-OCT-23 6DPC 1 LINK REVDAT 1 15-AUG-18 6DPC 0 JRNL AUTH N.L.SAMARA,W.YANG JRNL TITL CATION TRAFFICKING PROPELS RNA HYDROLYSIS. JRNL REF NAT. STRUCT. MOL. BIOL. V. 25 715 2018 JRNL REFN ESSN 1545-9985 JRNL PMID 30076410 JRNL DOI 10.1038/S41594-018-0099-4 REMARK 2 REMARK 2 RESOLUTION. 1.34 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.34 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.01 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.6 REMARK 3 NUMBER OF REFLECTIONS : 38826 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.150 REMARK 3 R VALUE (WORKING SET) : 0.149 REMARK 3 FREE R VALUE : 0.180 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.810 REMARK 3 FREE R VALUE TEST SET COUNT : 1868 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 20.0095 - 3.1503 0.94 2981 136 0.1238 0.1587 REMARK 3 2 3.1503 - 2.5020 0.97 2967 174 0.1424 0.1750 REMARK 3 3 2.5020 - 2.1862 0.97 3044 132 0.1421 0.1680 REMARK 3 4 2.1862 - 1.9865 0.96 2936 159 0.1425 0.1797 REMARK 3 5 1.9865 - 1.8442 0.93 2857 151 0.1491 0.1464 REMARK 3 6 1.8442 - 1.7356 0.91 2746 143 0.1510 0.1873 REMARK 3 7 1.7356 - 1.6487 0.91 2781 145 0.1565 0.1948 REMARK 3 8 1.6487 - 1.5769 0.91 2759 157 0.1721 0.1992 REMARK 3 9 1.5769 - 1.5163 0.91 2828 120 0.1776 0.2009 REMARK 3 10 1.5163 - 1.4639 0.91 2781 154 0.2042 0.2160 REMARK 3 11 1.4639 - 1.4182 0.91 2783 117 0.2318 0.2602 REMARK 3 12 1.4182 - 1.3777 0.91 2790 139 0.2683 0.3272 REMARK 3 13 1.3777 - 1.3414 0.90 2705 141 0.3057 0.3462 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.160 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.84 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.76 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1491 REMARK 3 ANGLE : 1.061 2052 REMARK 3 CHIRALITY : 0.070 226 REMARK 3 PLANARITY : 0.007 212 REMARK 3 DIHEDRAL : 21.754 591 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 61:66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.569 -4.318 18.609 REMARK 3 T TENSOR REMARK 3 T11: 0.2307 T22: 0.4711 REMARK 3 T33: 0.2849 T12: 0.0595 REMARK 3 T13: 0.0529 T23: 0.0656 REMARK 3 L TENSOR REMARK 3 L11: 6.1873 L22: 4.7605 REMARK 3 L33: 6.9667 L12: 0.1244 REMARK 3 L13: -1.2230 L23: 2.5904 REMARK 3 S TENSOR REMARK 3 S11: 0.0675 S12: 1.0157 S13: 0.3409 REMARK 3 S21: -0.8064 S22: -0.3383 S23: -0.7269 REMARK 3 S31: -0.1034 S32: 1.3361 S33: 0.2842 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 67:75 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.453 -6.271 16.163 REMARK 3 T TENSOR REMARK 3 T11: 0.1878 T22: 0.1719 REMARK 3 T33: 0.1551 T12: 0.0125 REMARK 3 T13: 0.0078 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 2.0761 L22: 1.7556 REMARK 3 L33: 2.2736 L12: 1.4320 REMARK 3 L13: 1.9361 L23: 1.7792 REMARK 3 S TENSOR REMARK 3 S11: 0.1785 S12: -0.0969 S13: -0.0815 REMARK 3 S21: -0.1481 S22: -0.1443 S23: 0.1238 REMARK 3 S31: 0.1824 S32: -0.1433 S33: -0.0681 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 76:87 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.880 -6.578 16.548 REMARK 3 T TENSOR REMARK 3 T11: 0.1884 T22: 0.1591 REMARK 3 T33: 0.1686 T12: 0.0087 REMARK 3 T13: 0.0140 T23: -0.0134 REMARK 3 L TENSOR REMARK 3 L11: 7.3702 L22: 0.0523 REMARK 3 L33: 4.2145 L12: -0.3654 REMARK 3 L13: 5.5202 L23: -0.3061 REMARK 3 S TENSOR REMARK 3 S11: 0.2906 S12: 0.0658 S13: -0.4860 REMARK 3 S21: -0.1484 S22: -0.0569 S23: 0.0412 REMARK 3 S31: 0.1434 S32: -0.0738 S33: -0.2177 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 88:96 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.944 -11.699 23.754 REMARK 3 T TENSOR REMARK 3 T11: 0.1973 T22: 0.1388 REMARK 3 T33: 0.2825 T12: 0.0414 REMARK 3 T13: 0.0177 T23: 0.0158 REMARK 3 L TENSOR REMARK 3 L11: 5.0918 L22: 2.3590 REMARK 3 L33: 9.3504 L12: -1.9555 REMARK 3 L13: -6.3174 L23: 1.1349 REMARK 3 S TENSOR REMARK 3 S11: -0.1699 S12: -0.2706 S13: -0.9340 REMARK 3 S21: 0.1451 S22: 0.0404 S23: -0.2480 REMARK 3 S31: 0.5899 S32: 0.4677 S33: 0.1895 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 97:104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.265 -4.923 18.438 REMARK 3 T TENSOR REMARK 3 T11: 0.1637 T22: 0.1744 REMARK 3 T33: 0.1371 T12: -0.0041 REMARK 3 T13: 0.0197 T23: -0.0351 REMARK 3 L TENSOR REMARK 3 L11: 7.6120 L22: 4.9490 REMARK 3 L33: 9.6683 L12: -1.9159 REMARK 3 L13: 2.8290 L23: -6.9058 REMARK 3 S TENSOR REMARK 3 S11: 0.0612 S12: -0.2764 S13: -0.4055 REMARK 3 S21: -0.0581 S22: 0.3491 S23: 0.4267 REMARK 3 S31: 0.1704 S32: -0.8215 S33: -0.3569 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN A AND RESID 105:122 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.071 0.578 23.872 REMARK 3 T TENSOR REMARK 3 T11: 0.1197 T22: 0.0902 REMARK 3 T33: 0.1086 T12: 0.0070 REMARK 3 T13: 0.0374 T23: 0.0007 REMARK 3 L TENSOR REMARK 3 L11: 6.1000 L22: 1.3696 REMARK 3 L33: 6.9161 L12: -0.8752 REMARK 3 L13: 5.3402 L23: -0.3576 REMARK 3 S TENSOR REMARK 3 S11: -0.0223 S12: -0.1774 S13: 0.0174 REMARK 3 S21: 0.0331 S22: -0.0478 S23: 0.0131 REMARK 3 S31: -0.0706 S32: -0.2308 S33: 0.0511 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN A AND RESID 123:133 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.875 -1.037 25.307 REMARK 3 T TENSOR REMARK 3 T11: 0.0992 T22: 0.1031 REMARK 3 T33: 0.1120 T12: -0.0084 REMARK 3 T13: 0.0323 T23: -0.0007 REMARK 3 L TENSOR REMARK 3 L11: 4.8318 L22: 1.6333 REMARK 3 L33: 4.6067 L12: -1.0033 REMARK 3 L13: 4.1972 L23: 0.2798 REMARK 3 S TENSOR REMARK 3 S11: 0.1150 S12: -0.0730 S13: 0.0149 REMARK 3 S21: 0.0387 S22: -0.0248 S23: -0.0459 REMARK 3 S31: 0.2165 S32: -0.0090 S33: -0.0644 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: ( CHAIN A AND RESID 134:142 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.819 9.436 16.640 REMARK 3 T TENSOR REMARK 3 T11: 0.2371 T22: 0.1305 REMARK 3 T33: 0.1646 T12: -0.0211 REMARK 3 T13: 0.0563 T23: 0.0288 REMARK 3 L TENSOR REMARK 3 L11: 5.3408 L22: 8.4053 REMARK 3 L33: 2.1273 L12: -5.9204 REMARK 3 L13: -0.1029 L23: 1.6602 REMARK 3 S TENSOR REMARK 3 S11: 0.2362 S12: 0.1220 S13: 0.3505 REMARK 3 S21: -0.1790 S22: -0.0743 S23: -0.3922 REMARK 3 S31: -0.6457 S32: 0.1682 S33: -0.1759 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: ( CHAIN A AND RESID 143:155 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.607 7.761 16.043 REMARK 3 T TENSOR REMARK 3 T11: 0.2410 T22: 0.2678 REMARK 3 T33: 0.1935 T12: 0.1307 REMARK 3 T13: 0.0210 T23: -0.0632 REMARK 3 L TENSOR REMARK 3 L11: 6.3672 L22: 2.5733 REMARK 3 L33: 6.6572 L12: -1.3539 REMARK 3 L13: 2.5346 L23: 0.3881 REMARK 3 S TENSOR REMARK 3 S11: 0.0326 S12: -0.0227 S13: 0.4026 REMARK 3 S21: -0.2837 S22: -0.3480 S23: 0.5353 REMARK 3 S31: -0.4774 S32: -0.7163 S33: 0.2600 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: ( CHAIN A AND RESID 156:169 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.336 5.720 24.766 REMARK 3 T TENSOR REMARK 3 T11: 0.1711 T22: 0.1959 REMARK 3 T33: 0.1458 T12: 0.0530 REMARK 3 T13: 0.0340 T23: -0.0186 REMARK 3 L TENSOR REMARK 3 L11: 9.1952 L22: 3.2127 REMARK 3 L33: 8.7701 L12: 2.9857 REMARK 3 L13: 7.7282 L23: 3.3528 REMARK 3 S TENSOR REMARK 3 S11: 0.2019 S12: -0.1256 S13: -0.0070 REMARK 3 S21: 0.0269 S22: -0.2555 S23: 0.1184 REMARK 3 S31: -0.0651 S32: -0.4892 S33: 0.0860 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: ( CHAIN A AND RESID 170:177 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.380 8.330 30.251 REMARK 3 T TENSOR REMARK 3 T11: 0.1839 T22: 0.1625 REMARK 3 T33: 0.1595 T12: -0.0037 REMARK 3 T13: 0.0261 T23: 0.0165 REMARK 3 L TENSOR REMARK 3 L11: 5.9300 L22: 8.4856 REMARK 3 L33: 5.7761 L12: -7.0990 REMARK 3 L13: -5.8555 L23: 6.9973 REMARK 3 S TENSOR REMARK 3 S11: 0.2564 S12: -0.1778 S13: 0.6010 REMARK 3 S21: -0.1388 S22: 0.1265 S23: -0.4195 REMARK 3 S31: -0.4021 S32: 0.2379 S33: -0.3098 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: ( CHAIN A AND RESID 178:186 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.359 -0.878 12.145 REMARK 3 T TENSOR REMARK 3 T11: 0.1694 T22: 0.3108 REMARK 3 T33: 0.1491 T12: 0.0464 REMARK 3 T13: 0.0560 T23: 0.0279 REMARK 3 L TENSOR REMARK 3 L11: 1.4263 L22: 8.6085 REMARK 3 L33: 8.1148 L12: 0.3008 REMARK 3 L13: -0.2811 L23: 5.3096 REMARK 3 S TENSOR REMARK 3 S11: 0.0403 S12: 0.4721 S13: -0.0397 REMARK 3 S21: -0.4910 S22: -0.0090 S23: -0.3316 REMARK 3 S31: -0.0571 S32: 0.5201 S33: -0.0767 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: ( CHAIN A AND RESID 187:194 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.688 -9.313 12.705 REMARK 3 T TENSOR REMARK 3 T11: 0.2085 T22: 0.1632 REMARK 3 T33: 0.1506 T12: 0.0781 REMARK 3 T13: 0.0000 T23: -0.0331 REMARK 3 L TENSOR REMARK 3 L11: 3.9394 L22: 8.5810 REMARK 3 L33: 9.7875 L12: 3.4512 REMARK 3 L13: -4.2392 L23: 1.5972 REMARK 3 S TENSOR REMARK 3 S11: 0.0532 S12: 0.0537 S13: -0.3139 REMARK 3 S21: -0.2080 S22: -0.1375 S23: 0.1130 REMARK 3 S31: 0.3051 S32: 0.2784 S33: 0.0714 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: ( CHAIN B AND RESID 1:4 ) OR ( CHAIN B AND RESID 5:6 REMARK 3 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.718 0.918 4.965 REMARK 3 T TENSOR REMARK 3 T11: 0.2442 T22: 0.2522 REMARK 3 T33: 0.1201 T12: 0.0699 REMARK 3 T13: 0.0545 T23: 0.0136 REMARK 3 L TENSOR REMARK 3 L11: 4.4394 L22: 7.5367 REMARK 3 L33: 1.5946 L12: 1.3452 REMARK 3 L13: 2.6409 L23: 0.7821 REMARK 3 S TENSOR REMARK 3 S11: -0.0895 S12: 0.4767 S13: 0.1336 REMARK 3 S21: -0.4550 S22: -0.0220 S23: -0.2654 REMARK 3 S31: -0.0274 S32: 0.1578 S33: 0.1271 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: ( CHAIN C AND RESID 1:6 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.463 3.823 3.067 REMARK 3 T TENSOR REMARK 3 T11: 0.3264 T22: 0.2155 REMARK 3 T33: 0.1268 T12: 0.0611 REMARK 3 T13: -0.0057 T23: 0.0299 REMARK 3 L TENSOR REMARK 3 L11: 2.3652 L22: 5.1378 REMARK 3 L33: 3.3582 L12: -1.2877 REMARK 3 L13: -1.9390 L23: 3.4568 REMARK 3 S TENSOR REMARK 3 S11: 0.0046 S12: 0.3571 S13: -0.0388 REMARK 3 S21: -0.7360 S22: -0.2674 S23: 0.0642 REMARK 3 S31: -0.3906 S32: -0.0009 S33: 0.3029 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: STRUCTURES REFINED IN PHENIX AND REMARK 3 NUCLEIC ACID AND PROTEIN RESIDUES BUILT IN COOT REMARK 4 REMARK 4 6DPC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1000235019. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-BM-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.31 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38831 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.340 REMARK 200 RESOLUTION RANGE LOW (A) : 20.010 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.8 REMARK 200 DATA REDUNDANCY : 1.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.34 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.9 REMARK 200 DATA REDUNDANCY IN SHELL : 1.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1ZBL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14% PEG3350, 20% GLYCEROL, 200 MM KI, REMARK 280 AND 25 MM CACL2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 40.91050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 18.71300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 40.91050 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 18.71300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, b, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 NOTE THAT CHAIN B WAS SPLIT INTO 2 CHAINS (B AND B) AT THE POSITION REMARK 400 4-5, WHERE THE CLEAVAGE OCCURS REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 A B 1 O2' REMARK 470 G b 6 O2' REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 174 O HOH A 301 2.10 REMARK 500 O HOH A 382 O HOH A 463 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 66 O3 GOL A 215 2656 1.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 C b 5 P C b 5 OP3 -0.124 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 C b 5 O5' - P - OP1 ANGL. DEV. = -8.8 DEGREES REMARK 500 DG C 2 O4' - C1' - N9 ANGL. DEV. = 2.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 478 DISTANCE = 6.26 ANGSTROMS REMARK 525 HOH A 479 DISTANCE = 6.40 ANGSTROMS REMARK 525 HOH A 480 DISTANCE = 6.44 ANGSTROMS REMARK 525 HOH A 481 DISTANCE = 6.67 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 201 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 71 OD2 REMARK 620 2 ASP A 192 OD1 106.9 REMARK 620 3 HOH A 325 O 86.0 85.3 REMARK 620 4 HOH A 358 O 89.4 85.6 168.1 REMARK 620 5 HOH B 201 O 163.4 88.3 88.8 98.6 REMARK 620 6 C b 5 OP3 160.2 92.9 96.1 92.1 8.3 REMARK 620 7 C b 5 OP1 100.1 153.0 97.7 93.9 65.1 60.1 REMARK 620 8 C b 5 OP1 97.6 155.0 101.5 90.0 68.0 62.6 4.5 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 202 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 71 OD1 REMARK 620 2 GLU A 109 OE1 99.1 REMARK 620 3 ASP A 132 OD1 134.2 94.3 REMARK 620 4 ASP A 132 OD2 101.9 149.5 55.2 REMARK 620 5 U B 4 O3' 148.1 83.6 76.6 89.9 REMARK 620 6 C b 5 OP1 91.2 107.3 125.9 94.2 58.1 REMARK 620 7 C b 5 OP1 90.3 111.6 124.6 90.2 59.8 4.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 203 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 163 OD1 REMARK 620 2 GLU A 166 OE1 101.2 REMARK 620 3 HOH A 302 O 166.6 76.9 REMARK 620 4 HOH A 331 O 96.9 87.1 96.2 REMARK 620 5 HOH A 372 O 100.8 156.7 80.0 97.8 REMARK 620 6 HOH A 422 O 84.8 93.8 82.1 177.9 80.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 102 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 188 OE2 REMARK 620 2 HOH A 343 O 63.6 REMARK 620 3 HOH B 212 O 112.5 125.5 REMARK 620 4 C b 5 OP2 100.1 131.6 103.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 205 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 192 OD1 REMARK 620 2 HOH A 325 O 53.7 REMARK 620 3 HOH A 369 O 81.7 135.4 REMARK 620 4 HOH B 201 O 60.3 55.3 104.6 REMARK 620 5 G b 6 OP2 99.8 48.8 161.8 61.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 204 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 196 O REMARK 620 2 HOH C 211 O 174.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K C 101 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 415 O REMARK 620 2 DT C 4 O4 95.0 REMARK 620 3 DG C 5 O6 169.7 77.4 REMARK 620 4 HOH C 211 O 88.3 88.0 84.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 101 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 208 O REMARK 620 2 HOH B 210 O 73.5 REMARK 620 3 G b 6 O6 69.3 99.6 REMARK 620 4 HOH C 205 O 115.4 161.7 98.6 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 210 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 211 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 212 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 213 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 214 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 215 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 216 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K B 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K C 101 DBREF 6DPC A 61 196 UNP Q9KEI9 RNH1_BACHD 61 196 DBREF 6DPC B 1 4 PDB 6DPC 6DPC 1 4 DBREF 6DPC b 5 6 PDB 6DPC 6DPC 5 6 DBREF 6DPC C 1 6 PDB 6DPC 6DPC 1 6 SEQRES 1 A 136 GLU GLU ILE ILE TRP GLU SER LEU SER VAL ASP VAL GLY SEQRES 2 A 136 SER GLN GLY ASN PRO GLY ILE VAL GLU TYR LYS GLY VAL SEQRES 3 A 136 ASP THR LYS THR GLY GLU VAL LEU PHE GLU ARG GLU PRO SEQRES 4 A 136 ILE PRO ILE GLY THR ASN ASN MET GLY GLU PHE LEU ALA SEQRES 5 A 136 ILE VAL HIS GLY LEU ARG TYR LEU LYS GLU ARG ASN SER SEQRES 6 A 136 ARG LYS PRO ILE TYR SER ASP SER GLN THR ALA ILE LYS SEQRES 7 A 136 TRP VAL LYS ASP LYS LYS ALA LYS SER THR LEU VAL ARG SEQRES 8 A 136 ASN GLU GLU THR ALA LEU ILE TRP LYS LEU VAL ASP GLU SEQRES 9 A 136 ALA GLU GLU TRP LEU ASN THR HIS THR TYR GLU THR PRO SEQRES 10 A 136 ILE LEU LYS TRP GLN THR ASP LYS TRP GLY GLU ILE LYS SEQRES 11 A 136 ALA ASP TYR GLY ARG LYS SEQRES 1 B 4 A C A U SEQRES 1 b 2 C G SEQRES 1 C 6 DC DG DA DT DG DT HET MN A 201 1 HET MN A 202 1 HET MN A 203 1 HET MN A 204 1 HET K A 205 1 HET IOD A 206 1 HET IOD A 207 1 HET IOD A 208 1 HET IOD A 209 1 HET GOL A 210 6 HET GOL A 211 6 HET GOL A 212 6 HET EDO A 213 4 HET EDO A 214 4 HET GOL A 215 6 HET EDO A 216 4 HET MN B 101 1 HET K B 102 1 HET K C 101 1 HETNAM MN MANGANESE (II) ION HETNAM K POTASSIUM ION HETNAM IOD IODIDE ION HETNAM GOL GLYCEROL HETNAM EDO 1,2-ETHANEDIOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 5 MN 5(MN 2+) FORMUL 9 K 3(K 1+) FORMUL 10 IOD 4(I 1-) FORMUL 14 GOL 4(C3 H8 O3) FORMUL 17 EDO 3(C2 H6 O2) FORMUL 24 HOH *213(H2 O) HELIX 1 AA1 THR A 104 ARG A 123 1 20 HELIX 2 AA2 SER A 133 LYS A 143 1 11 HELIX 3 AA3 ASN A 152 GLU A 154 5 3 HELIX 4 AA4 THR A 155 ASN A 170 1 16 HELIX 5 AA5 GLN A 182 GLY A 187 1 6 SHEET 1 AA1 5 VAL A 93 GLY A 103 0 SHEET 2 AA1 5 GLY A 79 ASP A 87 -1 N VAL A 81 O ILE A 100 SHEET 3 AA1 5 LEU A 68 GLN A 75 -1 N SER A 69 O VAL A 86 SHEET 4 AA1 5 ILE A 129 SER A 131 1 O TYR A 130 N LEU A 68 SHEET 5 AA1 5 ILE A 178 LYS A 180 1 O LEU A 179 N ILE A 129 LINK O3'C U B 4 P C C b 5 1555 1555 1.58 LINK OD2 ASP A 71 MN MN A 201 1555 1555 2.11 LINK OD1 ASP A 71 MN MN A 202 1555 1555 2.06 LINK OE1 GLU A 109 MN MN A 202 1555 1555 2.07 LINK OD1 ASP A 132 MN MN A 202 1555 1555 2.06 LINK OD2 ASP A 132 MN MN A 202 1555 1555 2.53 LINK OD1 ASP A 163 MN MN A 203 1555 1555 2.53 LINK OE1 GLU A 166 MN MN A 203 1555 1555 2.13 LINK OE2 GLU A 188 K B K B 102 1555 1555 3.34 LINK OD1 ASP A 192 MN MN A 201 1555 1555 2.11 LINK OD1 ASP A 192 K C K A 205 1555 1555 2.88 LINK O LYS A 196 MN MN A 204 1555 1555 2.52 LINK MN MN A 201 O HOH A 325 1555 1555 2.22 LINK MN MN A 201 O HOH A 358 1555 1555 2.15 LINK MN MN A 201 O CHOH B 201 1555 1555 2.14 LINK MN MN A 201 OP3B C b 5 1555 1555 2.15 LINK MN MN A 201 OP1B C b 5 1555 1555 2.38 LINK MN MN A 201 OP1C C b 5 1555 1555 2.29 LINK MN MN A 202 O3'C U B 4 1555 1555 2.62 LINK MN MN A 202 OP1B C b 5 1555 1555 2.36 LINK MN MN A 202 OP1C C b 5 1555 1555 2.25 LINK MN MN A 203 O HOH A 302 1555 1555 2.24 LINK MN MN A 203 O HOH A 331 1555 1555 2.58 LINK MN MN A 203 O HOH A 372 1555 4556 2.17 LINK MN MN A 203 O HOH A 422 1555 1555 2.10 LINK MN MN A 204 O HOH C 211 1555 4545 2.22 LINK K C K A 205 O HOH A 325 1555 1555 3.49 LINK K C K A 205 O HOH A 369 1555 1555 2.75 LINK K C K A 205 O CHOH B 201 1555 1555 3.01 LINK K C K A 205 OP2 G b 6 1555 1555 2.83 LINK O HOH A 343 K B K B 102 1555 1555 3.23 LINK O HOH A 415 K A K C 101 4555 1555 2.84 LINK MN MN B 101 O HOH B 208 1555 1555 2.60 LINK MN MN B 101 O HOH B 210 1555 1555 2.30 LINK MN MN B 101 O6 G b 6 1555 1555 2.54 LINK MN MN B 101 O HOH C 205 1555 4545 2.10 LINK K B K B 102 O HOH B 212 1555 1555 2.65 LINK K B K B 102 OP2B C b 5 1555 1555 2.66 LINK O4 DT C 4 K A K C 101 1555 1555 3.10 LINK O6 DG C 5 K A K C 101 1555 1555 2.63 LINK K A K C 101 O HOH C 211 1555 1555 3.08 CISPEP 1 ASN A 77 PRO A 78 0 1.06 SITE 1 AC1 6 ASP A 71 ASP A 192 HOH A 325 HOH A 358 SITE 2 AC1 6 HOH B 201 C b 5 SITE 1 AC2 5 ASP A 71 GLU A 109 ASP A 132 U B 4 SITE 2 AC2 5 C b 5 SITE 1 AC3 7 LYS A 144 ASP A 163 GLU A 166 HOH A 302 SITE 2 AC3 7 HOH A 331 HOH A 372 HOH A 422 SITE 1 AC4 5 LYS A 196 HOH A 415 K C 101 HOH C 205 SITE 2 AC4 5 HOH C 211 SITE 1 AC5 8 ASP A 192 ARG A 195 LYS A 196 HOH A 364 SITE 2 AC5 8 HOH A 369 HOH B 201 C b 5 G b 6 SITE 1 AC6 1 TYR A 83 SITE 1 AC7 2 HOH A 476 HOH A 478 SITE 1 AC8 6 GLY A 76 ASN A 77 PRO A 78 HOH A 399 SITE 2 AC8 6 DG C 2 DA C 3 SITE 1 AC9 8 HIS A 115 ARG A 118 TYR A 119 ARG A 123 SITE 2 AC9 8 GLU A 167 ASN A 170 GOL A 212 HOH A 354 SITE 1 AD1 6 HIS A 115 ARG A 118 ASN A 170 GOL A 211 SITE 2 AD1 6 HOH A 303 HOH A 404 SITE 1 AD2 3 LYS A 143 THR A 173 TYR A 174 SITE 1 AD3 4 LYS A 89 GLU A 153 ALA A 156 HOH A 349 SITE 1 AD4 5 GLU A 66 ARG A 123 SER A 125 LYS A 127 SITE 2 AD4 5 HOH A 317 SITE 1 AD5 3 THR A 148 HOH A 312 DT C 4 SITE 1 AD6 4 HOH B 208 HOH B 210 HOH C 205 G b 6 SITE 1 AD7 6 ASP A 132 GLU A 188 HOH A 305 U B 4 SITE 2 AD7 6 HOH B 212 C b 5 SITE 1 AD8 6 MN A 204 HOH A 415 DT C 4 DG C 5 SITE 2 AD8 6 HOH C 207 HOH C 211 CRYST1 81.821 37.426 61.946 90.00 96.83 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012222 0.000000 0.001464 0.00000 SCALE2 0.000000 0.026719 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016258 0.00000