HEADER HYDROLASE/RNA/DNA 09-JUN-18 6DPK TITLE CRYSTAL STRUCTURE OF BACILLUS HALODURANS RIBONUCLEASE H1 K196A IN TITLE 2 COMPLEX WITH AN RNA/DNA HYBRID: REACTION IN 4 MM MN2+ AND 200 MM K+ TITLE 3 FOR 240 S AT 21 C COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBONUCLEASE H; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CATALYTIC DOMAIN; COMPND 5 SYNONYM: RNASE H; COMPND 6 EC: 3.1.26.4; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: 5'-R(*AP*CP*AP*U)-3' PORTION OF CLEAVED RNA 5'- COMPND 11 R(*AP*CP*AP*UP*CP*G)-3'; COMPND 12 CHAIN: B; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: 5'-R(P*CP*G)-3' PORTION OF CLEAVED RNA (5'- COMPND 16 R(*AP*CP*AP*UP*CP*G)-3'); COMPND 17 CHAIN: b; COMPND 18 ENGINEERED: YES; COMPND 19 MOL_ID: 4; COMPND 20 MOLECULE: DNA (5'-D(*CP*GP*AP*TP*GP*T)-3'); COMPND 21 CHAIN: C; COMPND 22 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS HALODURANS; SOURCE 3 ORGANISM_TAXID: 86665; SOURCE 4 GENE: RNHA, BH0863; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 13 ORGANISM_TAXID: 32630; SOURCE 14 MOL_ID: 3; SOURCE 15 SYNTHETIC: YES; SOURCE 16 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 17 ORGANISM_TAXID: 32630; SOURCE 18 MOL_ID: 4; SOURCE 19 SYNTHETIC: YES; SOURCE 20 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 21 ORGANISM_TAXID: 32630 KEYWDS PROTEIN-RNA-DNA COMPLEX, DOUBLE HELIX, RNA HYDROLYSIS, IN CRYSTALLO KEYWDS 2 CATALYSIS, METAL DEPENDENT CATALYSIS, MONOVALENT CATIONS, DIVALENT KEYWDS 3 CATIONS, HYDROLASE-RNA-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR N.L.SAMARA,W.YANG REVDAT 2 11-OCT-23 6DPK 1 LINK REVDAT 1 15-AUG-18 6DPK 0 JRNL AUTH N.L.SAMARA,W.YANG JRNL TITL CATION TRAFFICKING PROPELS RNA HYDROLYSIS. JRNL REF NAT. STRUCT. MOL. BIOL. V. 25 715 2018 JRNL REFN ESSN 1545-9985 JRNL PMID 30076410 JRNL DOI 10.1038/S41594-018-0099-4 REMARK 2 REMARK 2 RESOLUTION. 1.39 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.39 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 37254 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.145 REMARK 3 R VALUE (WORKING SET) : 0.143 REMARK 3 FREE R VALUE : 0.169 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 1904 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.9268 - 3.3475 0.99 2626 133 0.1276 0.1455 REMARK 3 2 3.3475 - 2.6590 1.00 2563 136 0.1361 0.1772 REMARK 3 3 2.6590 - 2.3235 0.99 2532 146 0.1313 0.1511 REMARK 3 4 2.3235 - 2.1113 0.99 2525 144 0.1363 0.1443 REMARK 3 5 2.1113 - 1.9601 1.00 2536 140 0.1371 0.1545 REMARK 3 6 1.9601 - 1.8446 1.00 2541 143 0.1477 0.2086 REMARK 3 7 1.8446 - 1.7523 1.00 2525 152 0.1399 0.1818 REMARK 3 8 1.7523 - 1.6761 1.00 2501 134 0.1420 0.1645 REMARK 3 9 1.6761 - 1.6116 1.00 2560 115 0.1552 0.1884 REMARK 3 10 1.6116 - 1.5560 1.00 2574 110 0.1709 0.1793 REMARK 3 11 1.5560 - 1.5073 1.00 2461 142 0.1873 0.2152 REMARK 3 12 1.5073 - 1.4643 1.00 2556 127 0.2070 0.2500 REMARK 3 13 1.4643 - 1.4257 0.99 2505 145 0.2564 0.2495 REMARK 3 14 1.4257 - 1.3910 0.94 2345 137 0.3084 0.3000 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.520 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.01 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1555 REMARK 3 ANGLE : 1.088 2133 REMARK 3 CHIRALITY : 0.071 234 REMARK 3 PLANARITY : 0.007 217 REMARK 3 DIHEDRAL : 22.773 618 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 61:66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.572 -4.237 18.690 REMARK 3 T TENSOR REMARK 3 T11: 0.2075 T22: 0.5436 REMARK 3 T33: 0.2834 T12: 0.0807 REMARK 3 T13: 0.0169 T23: 0.0428 REMARK 3 L TENSOR REMARK 3 L11: 5.2732 L22: 2.8500 REMARK 3 L33: 8.1203 L12: 0.1081 REMARK 3 L13: -1.9142 L23: 1.2536 REMARK 3 S TENSOR REMARK 3 S11: 0.2386 S12: 0.6365 S13: 0.2090 REMARK 3 S21: -0.2347 S22: -0.2196 S23: -0.7692 REMARK 3 S31: -0.0037 S32: 1.7115 S33: 0.1340 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 67:87 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.329 -6.402 16.299 REMARK 3 T TENSOR REMARK 3 T11: 0.1781 T22: 0.1273 REMARK 3 T33: 0.1378 T12: -0.0013 REMARK 3 T13: -0.0191 T23: -0.0005 REMARK 3 L TENSOR REMARK 3 L11: 5.5110 L22: 1.7063 REMARK 3 L33: 5.0914 L12: -0.1702 REMARK 3 L13: 2.7843 L23: -0.0472 REMARK 3 S TENSOR REMARK 3 S11: 0.2201 S12: 0.0173 S13: -0.3546 REMARK 3 S21: -0.0952 S22: -0.0721 S23: 0.0523 REMARK 3 S31: 0.3043 S32: -0.0817 S33: -0.1811 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 88:96 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.061 -11.641 23.530 REMARK 3 T TENSOR REMARK 3 T11: 0.2513 T22: 0.1728 REMARK 3 T33: 0.2547 T12: 0.0346 REMARK 3 T13: -0.0418 T23: 0.0285 REMARK 3 L TENSOR REMARK 3 L11: 9.4872 L22: 5.0687 REMARK 3 L33: 6.0061 L12: 1.1677 REMARK 3 L13: -2.4275 L23: -0.0846 REMARK 3 S TENSOR REMARK 3 S11: 0.0862 S12: -0.1606 S13: -1.1786 REMARK 3 S21: 0.0752 S22: -0.1084 S23: -0.3702 REMARK 3 S31: 0.6275 S32: 0.2246 S33: 0.0182 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 97:104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.148 -5.399 18.852 REMARK 3 T TENSOR REMARK 3 T11: 0.1760 T22: 0.2894 REMARK 3 T33: 0.1685 T12: -0.0214 REMARK 3 T13: -0.0103 T23: 0.0008 REMARK 3 L TENSOR REMARK 3 L11: 3.3773 L22: 5.9884 REMARK 3 L33: 6.1504 L12: 0.1642 REMARK 3 L13: 0.5827 L23: -3.1255 REMARK 3 S TENSOR REMARK 3 S11: -0.0434 S12: -0.2384 S13: -0.1804 REMARK 3 S21: -0.0469 S22: 0.2427 S23: 0.4089 REMARK 3 S31: 0.2040 S32: -0.7819 S33: -0.1485 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 105:122 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.978 0.651 23.783 REMARK 3 T TENSOR REMARK 3 T11: 0.1107 T22: 0.1261 REMARK 3 T33: 0.1166 T12: 0.0030 REMARK 3 T13: 0.0044 T23: 0.0031 REMARK 3 L TENSOR REMARK 3 L11: 3.3695 L22: 1.4377 REMARK 3 L33: 5.3420 L12: -0.0264 REMARK 3 L13: 2.2060 L23: 0.8848 REMARK 3 S TENSOR REMARK 3 S11: -0.0084 S12: -0.1637 S13: -0.0042 REMARK 3 S21: 0.0450 S22: -0.0463 S23: 0.0534 REMARK 3 S31: -0.0866 S32: -0.1427 S33: 0.0252 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN A AND RESID 123:133 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.762 -0.953 25.218 REMARK 3 T TENSOR REMARK 3 T11: 0.1179 T22: 0.1743 REMARK 3 T33: 0.1380 T12: 0.0075 REMARK 3 T13: -0.0028 T23: 0.0114 REMARK 3 L TENSOR REMARK 3 L11: 2.7981 L22: 2.0611 REMARK 3 L33: 6.6315 L12: -0.3251 REMARK 3 L13: 1.5983 L23: 0.2473 REMARK 3 S TENSOR REMARK 3 S11: 0.0376 S12: -0.1590 S13: -0.0164 REMARK 3 S21: 0.0456 S22: -0.0039 S23: -0.0530 REMARK 3 S31: 0.0931 S32: 0.0441 S33: -0.0416 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN A AND RESID 134:142 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.716 9.468 16.542 REMARK 3 T TENSOR REMARK 3 T11: 0.2631 T22: 0.1509 REMARK 3 T33: 0.1585 T12: -0.0035 REMARK 3 T13: 0.0050 T23: 0.0322 REMARK 3 L TENSOR REMARK 3 L11: 5.3076 L22: 5.3159 REMARK 3 L33: 2.0914 L12: -4.2233 REMARK 3 L13: -1.1178 L23: 2.7193 REMARK 3 S TENSOR REMARK 3 S11: 0.3344 S12: 0.1756 S13: 0.3107 REMARK 3 S21: -0.3437 S22: -0.1771 S23: -0.3210 REMARK 3 S31: -0.6237 S32: -0.0068 S33: -0.1718 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: ( CHAIN A AND RESID 143:155 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.523 7.875 15.838 REMARK 3 T TENSOR REMARK 3 T11: 0.2691 T22: 0.3407 REMARK 3 T33: 0.1970 T12: 0.1568 REMARK 3 T13: -0.0067 T23: -0.0409 REMARK 3 L TENSOR REMARK 3 L11: 7.1212 L22: 1.6689 REMARK 3 L33: 4.9747 L12: -0.8278 REMARK 3 L13: 1.7495 L23: -1.0953 REMARK 3 S TENSOR REMARK 3 S11: 0.1894 S12: -0.0310 S13: 0.4384 REMARK 3 S21: -0.1508 S22: -0.2839 S23: 0.4540 REMARK 3 S31: -0.4762 S32: -0.8928 S33: 0.1202 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: ( CHAIN A AND RESID 156:169 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.272 5.768 24.672 REMARK 3 T TENSOR REMARK 3 T11: 0.1711 T22: 0.2335 REMARK 3 T33: 0.1451 T12: 0.0491 REMARK 3 T13: 0.0073 T23: -0.0186 REMARK 3 L TENSOR REMARK 3 L11: 6.3049 L22: 2.3734 REMARK 3 L33: 6.9895 L12: 0.8856 REMARK 3 L13: 3.7115 L23: 1.3295 REMARK 3 S TENSOR REMARK 3 S11: 0.1707 S12: -0.1805 S13: 0.0603 REMARK 3 S21: 0.0386 S22: -0.1990 S23: 0.1638 REMARK 3 S31: -0.0808 S32: -0.5986 S33: 0.0406 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: ( CHAIN A AND RESID 170:177 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.290 8.380 30.154 REMARK 3 T TENSOR REMARK 3 T11: 0.1855 T22: 0.1831 REMARK 3 T33: 0.1584 T12: -0.0059 REMARK 3 T13: -0.0147 T23: -0.0094 REMARK 3 L TENSOR REMARK 3 L11: 3.7117 L22: 5.6045 REMARK 3 L33: 8.2764 L12: -3.9777 REMARK 3 L13: -4.9962 L23: 3.9546 REMARK 3 S TENSOR REMARK 3 S11: 0.1460 S12: -0.4251 S13: 0.4109 REMARK 3 S21: -0.0603 S22: 0.1282 S23: -0.1816 REMARK 3 S31: -0.4307 S32: 0.2249 S33: -0.1797 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: ( CHAIN A AND RESID 178:186 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.350 -0.820 12.155 REMARK 3 T TENSOR REMARK 3 T11: 0.2039 T22: 0.3295 REMARK 3 T33: 0.1528 T12: 0.0540 REMARK 3 T13: 0.0380 T23: 0.0301 REMARK 3 L TENSOR REMARK 3 L11: 2.0656 L22: 7.1768 REMARK 3 L33: 3.4232 L12: -1.0818 REMARK 3 L13: 0.2012 L23: 4.5058 REMARK 3 S TENSOR REMARK 3 S11: 0.2177 S12: 0.4978 S13: 0.0105 REMARK 3 S21: -0.4512 S22: -0.1782 S23: -0.4869 REMARK 3 S31: -0.0822 S32: 0.4783 S33: -0.0958 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: ( CHAIN A AND RESID 187:195 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.797 -9.681 12.566 REMARK 3 T TENSOR REMARK 3 T11: 0.2643 T22: 0.2205 REMARK 3 T33: 0.1672 T12: 0.0484 REMARK 3 T13: -0.0250 T23: -0.0502 REMARK 3 L TENSOR REMARK 3 L11: 2.7661 L22: 2.9145 REMARK 3 L33: 5.2389 L12: -0.9214 REMARK 3 L13: -3.2797 L23: -0.7747 REMARK 3 S TENSOR REMARK 3 S11: -0.1001 S12: 0.5999 S13: -0.4903 REMARK 3 S21: -0.2835 S22: 0.0164 S23: 0.0357 REMARK 3 S31: 0.6016 S32: 0.0070 S33: -0.0441 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: ( CHAIN B AND RESID 1:4 ) OR ( CHAIN B AND RESID 5:6 REMARK 3 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.858 0.700 5.244 REMARK 3 T TENSOR REMARK 3 T11: 0.2605 T22: 0.2260 REMARK 3 T33: 0.1187 T12: 0.0704 REMARK 3 T13: 0.0029 T23: 0.0156 REMARK 3 L TENSOR REMARK 3 L11: 3.1964 L22: 4.6244 REMARK 3 L33: 4.0869 L12: 0.0247 REMARK 3 L13: 1.4058 L23: -0.0532 REMARK 3 S TENSOR REMARK 3 S11: 0.0080 S12: 0.2112 S13: 0.0181 REMARK 3 S21: -0.4849 S22: -0.2114 S23: -0.1906 REMARK 3 S31: 0.0103 S32: 0.2140 S33: 0.1601 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: ( CHAIN C AND RESID 1:6 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.411 3.833 3.089 REMARK 3 T TENSOR REMARK 3 T11: 0.3583 T22: 0.2112 REMARK 3 T33: 0.1442 T12: 0.0764 REMARK 3 T13: -0.0455 T23: 0.0103 REMARK 3 L TENSOR REMARK 3 L11: 2.3835 L22: 3.1954 REMARK 3 L33: 4.5693 L12: -0.6568 REMARK 3 L13: -0.3062 L23: 1.4842 REMARK 3 S TENSOR REMARK 3 S11: 0.0469 S12: 0.1604 S13: -0.0714 REMARK 3 S21: -0.7766 S22: -0.3137 S23: 0.1330 REMARK 3 S31: -0.4650 S32: -0.2299 S33: 0.2987 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: STRUCTURES REFINED IN PHENIX AND REMARK 3 NUCLEIC ACID AND PROTEIN RESIDUES BUILT IN COOT REMARK 4 REMARK 4 6DPK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1000235036. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-APR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.31 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37271 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.390 REMARK 200 RESOLUTION RANGE LOW (A) : 19.920 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 1.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.39 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.9 REMARK 200 DATA REDUNDANCY IN SHELL : 1.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDBID 1ZBL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14% PEG3350, 20% GLYCEROL, 200 MM KI, REMARK 280 AND 25 MM CACL2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 40.74600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 18.79900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 40.74600 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 18.79900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, b, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 55 REMARK 465 SER A 56 REMARK 465 HIS A 57 REMARK 465 MET A 58 REMARK 465 ALA A 59 REMARK 465 LYS A 60 REMARK 465 ALA A 196 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 A B 1 O2' REMARK 470 G b 6 O2' REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 174 O HOH A 302 2.08 REMARK 500 OP2 U B 4 O HOH B 301 2.09 REMARK 500 O HOH A 419 O HOH A 442 2.11 REMARK 500 O HOH A 407 O HOH A 428 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 66 O3 GOL A 211 2656 1.26 REMARK 500 OE2 GLU A 153 HZ2 LYS A 190 3455 1.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 C b 5 P C b 5 OP3 -0.121 REMARK 500 C b 5 P C b 5 OP3 -0.119 REMARK 500 DG C 2 O3' DG C 2 C3' -0.041 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG C 2 O4' - C1' - N9 ANGL. DEV. = 1.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 447 DISTANCE = 6.63 ANGSTROMS REMARK 525 HOH A 448 DISTANCE = 7.35 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 214 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 71 OD2 REMARK 620 2 ASP A 192 OD1 103.5 REMARK 620 3 HOH A 316 O 88.2 84.0 REMARK 620 4 HOH A 348 O 90.4 88.7 172.0 REMARK 620 5 C b 5 OP3 156.1 99.8 89.2 95.2 REMARK 620 6 C b 5 OP1 94.6 161.8 98.6 89.3 62.4 REMARK 620 7 C b 5 OP1 94.4 161.5 101.4 86.6 62.9 2.8 REMARK 620 8 C b 5 OP1 92.3 163.9 99.5 88.4 64.7 2.4 2.8 REMARK 620 9 HOH b 201 O 164.0 92.1 90.0 93.5 7.9 70.0 70.4 72.3 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 215 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 71 OD1 REMARK 620 2 GLU A 109 OE1 97.2 REMARK 620 3 ASP A 132 OD1 120.9 100.7 REMARK 620 4 ASP A 132 OD2 100.3 151.4 50.8 REMARK 620 5 U B 4 O3' 149.8 80.1 88.9 95.3 REMARK 620 6 C b 5 OP3 151.2 85.3 86.3 90.0 5.5 REMARK 620 7 C b 5 OP1 91.9 114.4 128.3 87.5 63.0 61.5 REMARK 620 8 C b 5 OP1 90.9 118.4 126.1 83.9 65.1 63.3 4.0 REMARK 620 9 C b 5 OP1 90.7 115.5 128.5 86.8 64.4 62.9 1.5 3.0 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 216 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 132 OD2 REMARK 620 2 HOH A 332 O 50.8 REMARK 620 3 U B 4 OP1 82.2 72.4 REMARK 620 4 U B 4 O5' 104.6 118.6 47.0 REMARK 620 5 C b 5 OP2 87.4 126.4 141.7 101.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 201 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 163 OD1 REMARK 620 2 GLU A 166 OE1 104.7 REMARK 620 3 HOH A 304 O 170.8 83.4 REMARK 620 4 HOH A 412 O 107.8 146.6 63.6 REMARK 620 5 HOH A 414 O 88.3 96.7 86.4 77.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN b 101 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 301 O REMARK 620 2 HOH A 387 O 91.7 REMARK 620 3 C b 5 OP3 168.6 99.8 REMARK 620 4 G b 6 OP2 101.8 79.1 80.1 REMARK 620 5 HOH b 205 O 101.6 94.5 78.1 155.8 REMARK 620 6 HOH b 207 O 71.1 160.3 97.5 94.8 98.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K C 101 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DT C 4 O4 REMARK 620 2 DG C 5 O6 73.7 REMARK 620 3 HOH C 211 O 82.3 82.3 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IOD A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 209 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 210 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 211 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 212 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 213 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 214 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 215 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 216 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN b 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K C 101 DBREF 6DPK A 59 196 UNP Q9KEI9 RNH1_BACHD 59 196 DBREF 6DPK B 1 4 PDB 6DPK 6DPK 1 4 DBREF 6DPK b 5 6 PDB 6DPK 6DPK 5 6 DBREF 6DPK C 1 6 PDB 6DPK 6DPK 1 6 SEQADV 6DPK GLY A 55 UNP Q9KEI9 EXPRESSION TAG SEQADV 6DPK SER A 56 UNP Q9KEI9 EXPRESSION TAG SEQADV 6DPK HIS A 57 UNP Q9KEI9 EXPRESSION TAG SEQADV 6DPK MET A 58 UNP Q9KEI9 EXPRESSION TAG SEQADV 6DPK ALA A 196 UNP Q9KEI9 LYS 196 ENGINEERED MUTATION SEQRES 1 A 142 GLY SER HIS MET ALA LYS GLU GLU ILE ILE TRP GLU SER SEQRES 2 A 142 LEU SER VAL ASP VAL GLY SER GLN GLY ASN PRO GLY ILE SEQRES 3 A 142 VAL GLU TYR LYS GLY VAL ASP THR LYS THR GLY GLU VAL SEQRES 4 A 142 LEU PHE GLU ARG GLU PRO ILE PRO ILE GLY THR ASN ASN SEQRES 5 A 142 MET GLY GLU PHE LEU ALA ILE VAL HIS GLY LEU ARG TYR SEQRES 6 A 142 LEU LYS GLU ARG ASN SER ARG LYS PRO ILE TYR SER ASP SEQRES 7 A 142 SER GLN THR ALA ILE LYS TRP VAL LYS ASP LYS LYS ALA SEQRES 8 A 142 LYS SER THR LEU VAL ARG ASN GLU GLU THR ALA LEU ILE SEQRES 9 A 142 TRP LYS LEU VAL ASP GLU ALA GLU GLU TRP LEU ASN THR SEQRES 10 A 142 HIS THR TYR GLU THR PRO ILE LEU LYS TRP GLN THR ASP SEQRES 11 A 142 LYS TRP GLY GLU ILE LYS ALA ASP TYR GLY ARG ALA SEQRES 1 B 4 A C A U SEQRES 1 b 2 C G SEQRES 1 C 6 DC DG DA DT DG DT HET MN A 201 1 HET IOD A 202 1 HET IOD A 203 1 HET IOD A 204 1 HET GOL A 205 6 HET GOL A 206 6 HET GOL A 207 6 HET EDO A 208 4 HET EDO A 209 4 HET EDO A 210 4 HET GOL A 211 6 HET EDO A 212 4 HET EDO A 213 4 HET MN A 214 1 HET MN A 215 1 HET K A 216 1 HET MN b 101 1 HET K C 101 1 HETNAM MN MANGANESE (II) ION HETNAM IOD IODIDE ION HETNAM GOL GLYCEROL HETNAM EDO 1,2-ETHANEDIOL HETNAM K POTASSIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 5 MN 4(MN 2+) FORMUL 6 IOD 3(I 1-) FORMUL 9 GOL 4(C3 H8 O3) FORMUL 12 EDO 5(C2 H6 O2) FORMUL 20 K 2(K 1+) FORMUL 23 HOH *189(H2 O) HELIX 1 AA1 THR A 104 ARG A 123 1 20 HELIX 2 AA2 SER A 133 LYS A 143 1 11 HELIX 3 AA3 ASN A 152 GLU A 154 5 3 HELIX 4 AA4 THR A 155 ASN A 170 1 16 HELIX 5 AA5 GLN A 182 GLY A 187 1 6 SHEET 1 AA1 5 VAL A 93 GLY A 103 0 SHEET 2 AA1 5 GLY A 79 ASP A 87 -1 N VAL A 81 O ILE A 100 SHEET 3 AA1 5 LEU A 68 GLN A 75 -1 N SER A 69 O VAL A 86 SHEET 4 AA1 5 ILE A 129 SER A 131 1 O TYR A 130 N LEU A 68 SHEET 5 AA1 5 ILE A 178 LYS A 180 1 O LEU A 179 N ILE A 129 LINK O3'A U B 4 P A C b 5 1555 1555 1.60 LINK OD2 ASP A 71 MN MN A 214 1555 1555 2.08 LINK OD1 ASP A 71 MN MN A 215 1555 1555 2.06 LINK OE1 GLU A 109 MN MN A 215 1555 1555 2.06 LINK OD1 ASP A 132 MN MN A 215 1555 1555 2.09 LINK OD2 ASP A 132 MN MN A 215 1555 1555 2.76 LINK OD2 ASP A 132 K B K A 216 1555 1555 3.29 LINK OD1 ASP A 163 MN MN A 201 1555 1555 2.57 LINK OE1 GLU A 166 MN MN A 201 1555 1555 2.10 LINK OD1 ASP A 192 MN MN A 214 1555 1555 2.14 LINK MN MN A 201 O HOH A 304 1555 1555 2.10 LINK MN MN A 201 O HOH A 412 1555 1555 2.23 LINK MN MN A 201 O HOH A 414 1555 1555 2.25 LINK MN MN A 214 O HOH A 316 1555 1555 2.19 LINK MN MN A 214 O HOH A 348 1555 1555 2.13 LINK MN MN A 214 OP3B C b 5 1555 1555 2.15 LINK MN MN A 214 OP1A C b 5 1555 1555 2.31 LINK MN MN A 214 OP1B C b 5 1555 1555 2.21 LINK MN MN A 214 OP1C C b 5 1555 1555 2.30 LINK MN MN A 214 O CHOH b 201 1555 1555 2.13 LINK MN MN A 215 O3'A U B 4 1555 1555 2.58 LINK MN MN A 215 OP3C C b 5 1555 1555 2.46 LINK MN MN A 215 OP1A C b 5 1555 1555 2.13 LINK MN MN A 215 OP1B C b 5 1555 1555 2.15 LINK MN MN A 215 OP1C C b 5 1555 1555 2.05 LINK K B K A 216 O HOH A 332 1555 1555 3.47 LINK K B K A 216 OP1B U B 4 1555 1555 3.30 LINK K B K A 216 O5'B U B 4 1555 1555 3.10 LINK K B K A 216 OP2B C b 5 1555 1555 2.59 LINK O HOH A 301 MN B MN b 101 1555 1555 2.19 LINK O BHOH A 387 MN B MN b 101 1555 1555 2.18 LINK OP3B C b 5 MN B MN b 101 1555 1555 2.25 LINK OP2 G b 6 MN B MN b 101 1555 1555 2.38 LINK MN B MN b 101 O HOH b 205 1555 1555 2.27 LINK MN B MN b 101 O HOH b 207 1555 1555 2.17 LINK O4 DT C 4 K A K C 101 1555 1555 3.31 LINK O6 DG C 5 K A K C 101 1555 1555 2.64 LINK K A K C 101 O HOH C 211 1555 1555 3.22 CISPEP 1 ASN A 77 PRO A 78 0 2.65 SITE 1 AC1 7 LYS A 144 ASP A 163 GLU A 166 HOH A 304 SITE 2 AC1 7 HOH A 317 HOH A 412 HOH A 414 SITE 1 AC2 1 TYR A 83 SITE 1 AC3 4 ILE A 64 EDO A 212 HOH A 445 HOH A 447 SITE 1 AC4 6 GLY A 76 ASN A 77 PRO A 78 HOH A 313 SITE 2 AC4 6 DG C 2 DA C 3 SITE 1 AC5 7 HIS A 115 TYR A 119 ARG A 123 GLU A 167 SITE 2 AC5 7 ASN A 170 GOL A 207 HOH A 307 SITE 1 AC6 6 HIS A 115 ARG A 118 ASN A 170 GOL A 206 SITE 2 AC6 6 HOH A 347 HOH A 392 SITE 1 AC7 4 LYS A 143 THR A 173 TYR A 174 HOH A 372 SITE 1 AC8 4 THR A 148 HOH A 320 DT C 4 DG C 5 SITE 1 AC9 5 GLU A 62 ILE A 63 TRP A 65 ARG A 151 SITE 2 AC9 5 HOH A 396 SITE 1 AD1 7 GLU A 66 TYR A 119 SER A 125 LYS A 127 SITE 2 AD1 7 HOH A 321 HOH A 366 HOH A 374 SITE 1 AD2 6 ARG A 126 GLU A 175 PRO A 177 IOD A 204 SITE 2 AD2 6 HOH A 376 HOH A 448 SITE 1 AD3 3 ASN A 152 GLU A 154 HOH A 401 SITE 1 AD4 6 ASP A 71 ASP A 192 HOH A 316 HOH A 348 SITE 2 AD4 6 C b 5 HOH b 201 SITE 1 AD5 5 ASP A 71 GLU A 109 ASP A 132 U B 4 SITE 2 AD5 5 C b 5 SITE 1 AD6 5 ASP A 132 GLU A 188 HOH A 308 U B 4 SITE 2 AD6 5 C b 5 SITE 1 AD7 8 ARG A 195 HOH A 301 HOH A 387 C b 5 SITE 2 AD7 8 G b 6 HOH b 201 HOH b 205 HOH b 207 SITE 1 AD8 3 DT C 4 DG C 5 HOH C 205 CRYST1 81.492 37.598 61.734 90.00 96.79 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012271 0.000000 0.001461 0.00000 SCALE2 0.000000 0.026597 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016313 0.00000