HEADER LYASE 14-JUN-18 6DSS TITLE RE-REFINEMENT OF P. FALCIPARUM OROTIDINE 5'-MONOPHOSPHATE TITLE 2 DECARBOXYLASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: OROTIDINE 5'-MONOPHOSPHATE DECARBOXYLASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 4.1.1.23; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM; SOURCE 3 ORGANISM_TAXID: 5833; SOURCE 4 GENE: OMPDC; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS COMPLEX, P FALCIPARUM, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR G.S.BRANDT,W.R.P.NOVAK REVDAT 2 11-OCT-23 6DSS 1 REMARK REVDAT 1 17-OCT-18 6DSS 0 JRNL AUTH W.R.P.NOVAK,K.H.J.WEST,L.M.D.KIRKMAN,G.S.BRANDT JRNL TITL RE-REFINEMENT OF PLASMODIUM FALCIPARUM OROTIDINE JRNL TITL 2 5'-MONOPHOSPHATE DECARBOXYLASE PROVIDES A CLEARER PICTURE OF JRNL TITL 3 AN IMPORTANT MALARIAL DRUG TARGET. JRNL REF ACTA CRYSTALLOGR F STRUCT V. 74 664 2018 JRNL REF 2 BIOL COMMUN JRNL REFN ESSN 2053-230X JRNL PMID 30279319 JRNL DOI 10.1107/S2053230X18010610 REMARK 0 REMARK 0 THIS ENTRY 6DSS REFLECTS AN ALTERNATIVE MODELING OF THE ORIGINAL REMARK 0 DATA IN 2ZA3 DETERMINED BY AUTHOR: TOKUOKA, K., INOUE, T. REMARK 0 ORIGINAL DATA REFERENCE 1 REMARK 0 PDB ID: 2ZA3 REMARK 0 AUTH K.TOKUOKA,Y.KUSAKARI,S.R.KRUNGKRAI,H.MATSUMURA,Y.KAI, REMARK 0 AUTH 2 J.KRUNGKRAI,T.HORII,T.INOUE REMARK 0 TITL STRUCTURAL BASIS FOR THE DECARBOXYLATION OF OROTIDINE REMARK 0 TITL 2 5'-MONOPHOSPHATE (OMP) BY PLASMODIUM FALCIPARUM OMP REMARK 0 TITL 3 DECARBOXYLASE. REMARK 0 REF J. BIOCHEM. V. 143 69 2008 REMARK 0 REFN ISSN 0021-924X REMARK 0 PMID 17981823 REMARK 0 DOI 10.1093/JB/MVM193 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.87 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.980 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 20667 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 1060 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.8693 - 5.1939 0.99 2467 114 0.1651 0.2115 REMARK 3 2 5.1939 - 4.1243 0.98 2412 125 0.1766 0.1736 REMARK 3 3 4.1243 - 3.6035 0.98 2420 136 0.2065 0.2551 REMARK 3 4 3.6035 - 3.2742 0.99 2432 152 0.2337 0.2667 REMARK 3 5 3.2742 - 3.0397 1.00 2475 124 0.2503 0.2779 REMARK 3 6 3.0397 - 2.8605 1.00 2489 128 0.2643 0.3316 REMARK 3 7 2.8605 - 2.7173 1.00 2454 152 0.2805 0.3137 REMARK 3 8 2.7173 - 2.5991 1.00 2458 129 0.2704 0.2819 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.460 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.13 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 5416 REMARK 3 ANGLE : 0.816 7309 REMARK 3 CHIRALITY : 0.051 782 REMARK 3 PLANARITY : 0.005 935 REMARK 3 DIHEDRAL : 3.951 3253 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND RESID 2 THROUGH 319) REMARK 3 SELECTION : CHAIN B REMARK 3 ATOM PAIRS NUMBER : 3060 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6DSS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB. REMARK 100 THE DEPOSITION ID IS D_1000235191. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-NOV-06 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL38B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20877 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.599 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 2.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3N3M REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 23% PEG 3000, PH 9.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 283K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 101.24800 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 58.45556 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 14.78667 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 101.24800 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 58.45556 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 14.78667 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 101.24800 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 58.45556 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 14.78667 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 116.91112 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 29.57333 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 116.91112 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 29.57333 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 116.91112 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 29.57333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6290 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 322 REMARK 465 SER A 323 REMARK 465 MET B 1 REMARK 465 ASN B 320 REMARK 465 MET B 321 REMARK 465 GLU B 322 REMARK 465 SER B 323 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN A 320 O HOH A 601 1.85 REMARK 500 NZ LYS B 174 O HOH B 701 1.93 REMARK 500 OD1 ASP A 311 O HOH A 602 1.98 REMARK 500 O HOH B 710 O HOH B 711 1.98 REMARK 500 OE2 GLU A 286 O HOH A 603 1.99 REMARK 500 OD2 ASP A 175 O HOH A 604 2.03 REMARK 500 N GLU A 74 O HOH A 605 2.07 REMARK 500 OD1 ASN A 233 O HOH A 606 2.08 REMARK 500 OE1 GLU A 93 O HOH A 607 2.11 REMARK 500 OE1 GLU B 155 O HOH B 702 2.11 REMARK 500 OD1 ASP A 175 O HOH A 608 2.14 REMARK 500 OD2 ASP A 141 NZ LYS B 138 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 73 -77.11 -111.24 REMARK 500 ASP A 141 -171.99 -171.29 REMARK 500 ASN A 270 105.73 67.84 REMARK 500 GLU B 73 -83.40 -101.69 REMARK 500 ASP B 141 -173.81 -171.63 REMARK 500 TYR B 255 -14.03 76.93 REMARK 500 ASN B 270 101.75 69.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue U5P A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue U5P B 600 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2ZA3 RELATED DB: PDB REMARK 900 THIS ENTRY 6DSS REFLECTS AN ALTERNATIVE MODELING OF X-RAY DATA IN REMARK 900 ENTRY 2ZA3 DBREF 6DSS A 1 323 UNP Q8T6J6 Q8T6J6_PLAFA 1 323 DBREF 6DSS B 1 323 UNP Q8T6J6 Q8T6J6_PLAFA 1 323 SEQRES 1 A 323 MET GLY PHE LYS VAL LYS LEU GLU LYS ARG ARG ASN ALA SEQRES 2 A 323 ILE ASN THR CYS LEU CYS ILE GLY LEU ASP PRO ASP GLU SEQRES 3 A 323 LYS ASP ILE GLU ASN PHE MET LYS ASN GLU LYS GLU ASN SEQRES 4 A 323 ASN TYR ASN ASN ILE LYS LYS ASN LEU LYS GLU LYS TYR SEQRES 5 A 323 ILE ASN ASN VAL SER ILE LYS LYS ASP ILE LEU LEU LYS SEQRES 6 A 323 ALA PRO ASP ASN ILE ILE ARG GLU GLU LYS SER GLU GLU SEQRES 7 A 323 PHE PHE TYR PHE PHE ASN HIS PHE CYS PHE TYR ILE ILE SEQRES 8 A 323 ASN GLU THR ASN LYS TYR ALA LEU THR PHE LYS MET ASN SEQRES 9 A 323 PHE ALA PHE TYR ILE PRO TYR GLY SER VAL GLY ILE ASP SEQRES 10 A 323 VAL LEU LYS ASN VAL PHE ASP TYR LEU TYR GLU LEU ASN SEQRES 11 A 323 ILE PRO THR ILE LEU ASP MET LYS ILE ASN ASP ILE GLY SEQRES 12 A 323 ASN THR VAL LYS ASN TYR ARG LYS PHE ILE PHE GLU TYR SEQRES 13 A 323 LEU LYS SER ASP SER CYS THR VAL ASN ILE TYR MET GLY SEQRES 14 A 323 THR ASN MET LEU LYS ASP ILE CYS TYR ASP GLU GLU LYS SEQRES 15 A 323 ASN LYS TYR TYR SER ALA PHE VAL LEU VAL LYS THR THR SEQRES 16 A 323 ASN PRO ASP SER ALA ILE PHE GLN LYS ASN LEU SER LEU SEQRES 17 A 323 ASP ASN LYS GLN ALA TYR VAL ILE MET ALA GLN GLU ALA SEQRES 18 A 323 LEU ASN MET SER SER TYR LEU ASN LEU GLU GLN ASN ASN SEQRES 19 A 323 GLU PHE ILE GLY PHE VAL VAL GLY ALA ASN SER TYR ASP SEQRES 20 A 323 GLU MET ASN TYR ILE ARG THR TYR PHE PRO ASN CYS TYR SEQRES 21 A 323 ILE LEU SER PRO GLY ILE GLY ALA GLN ASN GLY ASP LEU SEQRES 22 A 323 HIS LYS THR LEU THR ASN GLY TYR HIS LYS SER TYR GLU SEQRES 23 A 323 LYS ILE LEU ILE ASN ILE GLY ARG ALA ILE THR LYS ASN SEQRES 24 A 323 PRO TYR PRO GLN LYS ALA ALA GLN MET TYR TYR ASP GLN SEQRES 25 A 323 ILE ASN ALA ILE LEU LYS GLN ASN MET GLU SER SEQRES 1 B 323 MET GLY PHE LYS VAL LYS LEU GLU LYS ARG ARG ASN ALA SEQRES 2 B 323 ILE ASN THR CYS LEU CYS ILE GLY LEU ASP PRO ASP GLU SEQRES 3 B 323 LYS ASP ILE GLU ASN PHE MET LYS ASN GLU LYS GLU ASN SEQRES 4 B 323 ASN TYR ASN ASN ILE LYS LYS ASN LEU LYS GLU LYS TYR SEQRES 5 B 323 ILE ASN ASN VAL SER ILE LYS LYS ASP ILE LEU LEU LYS SEQRES 6 B 323 ALA PRO ASP ASN ILE ILE ARG GLU GLU LYS SER GLU GLU SEQRES 7 B 323 PHE PHE TYR PHE PHE ASN HIS PHE CYS PHE TYR ILE ILE SEQRES 8 B 323 ASN GLU THR ASN LYS TYR ALA LEU THR PHE LYS MET ASN SEQRES 9 B 323 PHE ALA PHE TYR ILE PRO TYR GLY SER VAL GLY ILE ASP SEQRES 10 B 323 VAL LEU LYS ASN VAL PHE ASP TYR LEU TYR GLU LEU ASN SEQRES 11 B 323 ILE PRO THR ILE LEU ASP MET LYS ILE ASN ASP ILE GLY SEQRES 12 B 323 ASN THR VAL LYS ASN TYR ARG LYS PHE ILE PHE GLU TYR SEQRES 13 B 323 LEU LYS SER ASP SER CYS THR VAL ASN ILE TYR MET GLY SEQRES 14 B 323 THR ASN MET LEU LYS ASP ILE CYS TYR ASP GLU GLU LYS SEQRES 15 B 323 ASN LYS TYR TYR SER ALA PHE VAL LEU VAL LYS THR THR SEQRES 16 B 323 ASN PRO ASP SER ALA ILE PHE GLN LYS ASN LEU SER LEU SEQRES 17 B 323 ASP ASN LYS GLN ALA TYR VAL ILE MET ALA GLN GLU ALA SEQRES 18 B 323 LEU ASN MET SER SER TYR LEU ASN LEU GLU GLN ASN ASN SEQRES 19 B 323 GLU PHE ILE GLY PHE VAL VAL GLY ALA ASN SER TYR ASP SEQRES 20 B 323 GLU MET ASN TYR ILE ARG THR TYR PHE PRO ASN CYS TYR SEQRES 21 B 323 ILE LEU SER PRO GLY ILE GLY ALA GLN ASN GLY ASP LEU SEQRES 22 B 323 HIS LYS THR LEU THR ASN GLY TYR HIS LYS SER TYR GLU SEQRES 23 B 323 LYS ILE LEU ILE ASN ILE GLY ARG ALA ILE THR LYS ASN SEQRES 24 B 323 PRO TYR PRO GLN LYS ALA ALA GLN MET TYR TYR ASP GLN SEQRES 25 B 323 ILE ASN ALA ILE LEU LYS GLN ASN MET GLU SER HET U5P A 500 21 HET U5P B 600 21 HETNAM U5P URIDINE-5'-MONOPHOSPHATE FORMUL 3 U5P 2(C9 H13 N2 O9 P) FORMUL 5 HOH *56(H2 O) HELIX 1 AA1 GLY A 2 ASN A 15 1 14 HELIX 2 AA2 ASP A 25 ASN A 39 1 15 HELIX 3 AA3 TYR A 41 LEU A 48 1 8 HELIX 4 AA4 LYS A 49 VAL A 56 5 8 HELIX 5 AA5 LYS A 59 LEU A 64 1 6 HELIX 6 AA6 ALA A 66 GLU A 73 1 8 HELIX 7 AA7 GLU A 77 ASN A 95 1 19 HELIX 8 AA8 LYS A 96 ALA A 98 5 3 HELIX 9 AA9 ALA A 106 ILE A 109 5 4 HELIX 10 AB1 GLY A 112 LEU A 129 1 18 HELIX 11 AB2 ILE A 142 GLU A 155 1 14 HELIX 12 AB3 ILE A 166 ILE A 176 5 11 HELIX 13 AB4 SER A 199 LYS A 204 1 6 HELIX 14 AB5 ALA A 213 ASN A 229 1 17 HELIX 15 AB6 LEU A 230 ASN A 234 5 5 HELIX 16 AB7 SER A 245 PHE A 256 1 12 HELIX 17 AB8 ASP A 272 TYR A 281 1 10 HELIX 18 AB9 SER A 284 GLU A 286 5 3 HELIX 19 AC1 GLY A 293 LYS A 298 1 6 HELIX 20 AC2 TYR A 301 ASN A 320 1 20 HELIX 21 AC3 PHE B 3 ASN B 15 1 13 HELIX 22 AC4 ASP B 25 ASN B 39 1 15 HELIX 23 AC5 TYR B 41 GLU B 50 1 10 HELIX 24 AC6 LYS B 51 VAL B 56 5 6 HELIX 25 AC7 LYS B 59 LEU B 64 1 6 HELIX 26 AC8 ALA B 66 GLU B 73 1 8 HELIX 27 AC9 GLU B 77 ASN B 95 1 19 HELIX 28 AD1 LYS B 96 ALA B 98 5 3 HELIX 29 AD2 ALA B 106 TYR B 108 5 3 HELIX 30 AD3 GLY B 112 ASN B 130 1 19 HELIX 31 AD4 ILE B 142 GLU B 155 1 14 HELIX 32 AD5 ILE B 166 ILE B 176 5 11 HELIX 33 AD6 SER B 199 LYS B 204 1 6 HELIX 34 AD7 ALA B 213 ASN B 229 1 17 HELIX 35 AD8 LEU B 230 ASN B 234 5 5 HELIX 36 AD9 SER B 245 THR B 254 1 10 HELIX 37 AE1 ASP B 272 TYR B 281 1 10 HELIX 38 AE2 SER B 284 GLU B 286 5 3 HELIX 39 AE3 GLY B 293 LYS B 298 1 6 HELIX 40 AE4 TYR B 301 LYS B 318 1 18 SHEET 1 AA1 9 LEU A 18 LEU A 22 0 SHEET 2 AA1 9 THR A 100 ASN A 104 1 O LYS A 102 N LEU A 22 SHEET 3 AA1 9 THR A 133 ILE A 139 1 O ILE A 134 N MET A 103 SHEET 4 AA1 9 SER A 161 VAL A 164 1 O THR A 163 N ILE A 139 SHEET 5 AA1 9 SER A 187 LYS A 193 1 O PHE A 189 N VAL A 164 SHEET 6 AA1 9 ILE A 237 VAL A 241 1 O GLY A 238 N ALA A 188 SHEET 7 AA1 9 ILE A 261 SER A 263 1 O LEU A 262 N PHE A 239 SHEET 8 AA1 9 ILE A 288 ILE A 292 1 O LEU A 289 N ILE A 261 SHEET 9 AA1 9 LEU A 18 LEU A 22 1 N CYS A 19 O ILE A 290 SHEET 1 AA2 2 TYR A 178 ASP A 179 0 SHEET 2 AA2 2 LYS A 184 TYR A 185 -1 O LYS A 184 N ASP A 179 SHEET 1 AA3 2 SER A 207 LEU A 208 0 SHEET 2 AA3 2 LYS A 211 GLN A 212 -1 O LYS A 211 N LEU A 208 SHEET 1 AA4 9 LEU B 18 LEU B 22 0 SHEET 2 AA4 9 THR B 100 ASN B 104 1 O LYS B 102 N LEU B 22 SHEET 3 AA4 9 THR B 133 ILE B 139 1 O ILE B 134 N MET B 103 SHEET 4 AA4 9 SER B 161 VAL B 164 1 O SER B 161 N LEU B 135 SHEET 5 AA4 9 SER B 187 LYS B 193 1 O PHE B 189 N VAL B 164 SHEET 6 AA4 9 ILE B 237 VAL B 241 1 O GLY B 238 N VAL B 190 SHEET 7 AA4 9 ILE B 261 SER B 263 1 O LEU B 262 N PHE B 239 SHEET 8 AA4 9 ILE B 288 ILE B 292 1 O LEU B 289 N ILE B 261 SHEET 9 AA4 9 LEU B 18 LEU B 22 1 N CYS B 19 O ILE B 290 SHEET 1 AA5 2 TYR B 178 ASP B 179 0 SHEET 2 AA5 2 LYS B 184 TYR B 185 -1 O LYS B 184 N ASP B 179 SHEET 1 AA6 2 SER B 207 LEU B 208 0 SHEET 2 AA6 2 LYS B 211 GLN B 212 -1 O LYS B 211 N LEU B 208 SITE 1 AC1 15 ASP A 23 LYS A 102 ASN A 104 ASP A 136 SITE 2 AC1 15 LYS A 138 THR A 194 THR A 195 PRO A 264 SITE 3 AC1 15 GLN A 269 ASN A 291 GLY A 293 ARG A 294 SITE 4 AC1 15 ASP B 141 ILE B 142 THR B 145 SITE 1 AC2 15 ASP A 141 ILE A 142 THR A 145 ASP B 23 SITE 2 AC2 15 LYS B 102 ASN B 104 ASP B 136 THR B 194 SITE 3 AC2 15 THR B 195 PRO B 264 GLN B 269 ASN B 291 SITE 4 AC2 15 GLY B 293 ARG B 294 HOH B 712 CRYST1 202.496 202.496 44.360 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004938 0.002851 0.000000 0.00000 SCALE2 0.000000 0.005702 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022543 0.00000