data_6DST # _entry.id 6DST # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6DST pdb_00006dst 10.2210/pdb6dst/pdb WWPDB D_1000234008 ? ? BMRB 30481 ? 10.13018/BMR30481 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-04-10 2 'Structure model' 1 1 2019-05-01 3 'Structure model' 1 2 2019-12-18 4 'Structure model' 1 3 2023-06-14 5 'Structure model' 1 4 2024-05-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Author supporting evidence' 4 3 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' Other 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' pdbx_audit_support 3 3 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_database_status 6 5 'Structure model' chem_comp_atom 7 5 'Structure model' chem_comp_bond 8 5 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.year' 5 3 'Structure model' '_pdbx_audit_support.funding_organization' 6 3 'Structure model' '_pdbx_nmr_spectrometer.model' 7 4 'Structure model' '_database_2.pdbx_DOI' 8 4 'Structure model' '_database_2.pdbx_database_accession' 9 4 'Structure model' '_pdbx_database_status.status_code_nmr_data' 10 5 'Structure model' '_database_2.pdbx_DOI' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6DST _pdbx_database_status.recvd_initial_deposition_date 2018-06-14 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Recombinant melittin' _pdbx_database_related.db_id 30481 _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Ramirez, L.M.' 1 ? 'Pande, J.' 2 ? 'Shekhtman, A.' 3 ? # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.unpublished_flag ? ? ? ? ? ? ? US ? ? primary 'J Phys Chem B' JPCBFK 1278 1520-5207 ? ? 123 ? 356 368 'Helical Structure of Recombinant Melittin.' 2019 ? 10.1021/acs.jpcb.8b08424 30570258 ? ? ? ? ? ? ? ? US ? ? 1 Biochemistry BICHAW 0033 1520-4995 ? ? 57 ? 2775 2785 'Nuclear Magnetic Resonance-Based Structural Characterization and Backbone Dynamics of Recombinant Bee Venom Melittin.' 2018 ? 10.1021/acs.biochem.8b00156 29668274 ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ramirez, L.S.' 1 ? primary 'Pande, J.' 2 ? primary 'Shekhtman, A.' 3 ? 1 'Ramirez, L.' 4 ? 1 'Shekhtman, A.' 5 ? 1 'Pande, J.' 6 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description Melittin _entity.formula_weight 2852.487 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'residues 44-69' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Allergen Api m 3,Allergen Api m III' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GIGAVLKVLTTGLPALISWIKRKRQQ _entity_poly.pdbx_seq_one_letter_code_can GIGAVLKVLTTGLPALISWIKRKRQQ _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ILE n 1 3 GLY n 1 4 ALA n 1 5 VAL n 1 6 LEU n 1 7 LYS n 1 8 VAL n 1 9 LEU n 1 10 THR n 1 11 THR n 1 12 GLY n 1 13 LEU n 1 14 PRO n 1 15 ALA n 1 16 LEU n 1 17 ILE n 1 18 SER n 1 19 TRP n 1 20 ILE n 1 21 LYS n 1 22 ARG n 1 23 LYS n 1 24 ARG n 1 25 GLN n 1 26 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 26 _entity_src_gen.gene_src_common_name Honeybee _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene MELT _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Apis mellifera' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 7460 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 ILE 2 2 2 ILE ILE A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 ALA 4 4 4 ALA ALA A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 PRO 14 14 14 PRO PRO A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 TRP 19 19 19 TRP TRP A . n A 1 20 ILE 20 20 20 ILE ILE A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 ARG 22 22 22 ARG ARG A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 GLN 25 25 25 GLN GLN A . n A 1 26 GLN 26 26 26 GLN GLN A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6DST _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6DST _struct.title 'Recombinant melittin' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6DST _struct_keywords.text 'Hemolytic, Antibacterial, Alpha-helical peptide, Bee venom, TOXIN' _struct_keywords.pdbx_keywords TOXIN # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MEL_APIME _struct_ref.pdbx_db_accession P01501 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code GIGAVLKVLTTGLPALISWIKRKRQQ _struct_ref.pdbx_align_begin 44 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6DST _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 26 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P01501 _struct_ref_seq.db_align_beg 44 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 69 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 26 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 2730 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id GLY _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 3 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLN _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 25 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id GLY _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 3 _struct_conf.end_auth_comp_id GLN _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 25 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 23 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 24 ? ? -92.10 -68.06 2 2 ARG A 24 ? ? -105.85 -68.08 3 2 GLN A 25 ? ? -60.31 -177.27 4 3 ARG A 24 ? ? -103.04 -68.08 5 4 ARG A 24 ? ? -129.42 -74.73 6 5 ARG A 24 ? ? -108.67 -67.81 7 6 ARG A 24 ? ? -105.48 -68.16 8 6 GLN A 25 ? ? -58.27 177.40 9 8 ARG A 24 ? ? -130.84 -74.62 10 9 ARG A 24 ? ? -96.96 -68.07 11 10 ARG A 24 ? ? -91.90 -68.14 12 11 ARG A 24 ? ? -98.01 -68.08 13 13 ARG A 24 ? ? -107.27 -68.09 14 14 ARG A 24 ? ? -120.10 -65.64 15 14 GLN A 25 ? ? -59.79 -176.36 16 15 ARG A 24 ? ? -123.99 -74.54 17 16 ARG A 24 ? ? -123.55 -74.60 18 18 ARG A 24 ? ? -99.40 -68.08 19 19 GLN A 25 ? ? -178.87 131.79 # _pdbx_nmr_ensemble.entry_id 6DST _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 6DST _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria medoid # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '0.05 mM [U-95% 13C; U-95% 15N] melittin, 10 % v/v [U-2H] glycerol, 10 mM potassium phosphate buffer, trifluoroethanol/water' trifluoroethanol/water 13C_15N_sample1 solution ;Solution contains 10% w/v deuterated glycerol (to increase viscosity), 30% v/v deuterated trifluoroethanol (to stabilize helical structure), and 10% v/v deuterium oxide in 10 mM potassium phosphate buffer at pH 7 ; 2 '0.050 mM [U-95% 13C; U-95% 15N] Melittin, 10 mM potassium phosphate buffer, trifluoroethanol/water' trifluoroethanol/water 13C_15N_sample2 solution ;Solution contains 30% v/v deuterated trifluoroethanol (to stabilize helical structure), and 10% v/v deuterium oxide in 10 mM potassium phosphate buffer at pH 7 No glycerol added ; # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 melittin 0.05 ? mM '[U-95% 13C; U-95% 15N]' 1 glycerol 10 ? '% v/v' '[U-2H]' 1 'potassium phosphate buffer' 10 ? mM 'natural abundance' 2 Melittin 0.050 ? mM '[U-95% 13C; U-95% 15N]' 2 'potassium phosphate buffer' 10 ? mM 'natural abundance' # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.details _pdbx_nmr_exptl_sample_conditions.ionic_strength_err _pdbx_nmr_exptl_sample_conditions.ionic_strength_units _pdbx_nmr_exptl_sample_conditions.label _pdbx_nmr_exptl_sample_conditions.pH_err _pdbx_nmr_exptl_sample_conditions.pH_units _pdbx_nmr_exptl_sample_conditions.pressure_err _pdbx_nmr_exptl_sample_conditions.temperature_err _pdbx_nmr_exptl_sample_conditions.temperature_units 2 298 atm 1 7 10 ? ? mM conditions_2 ? pH ? ? K 3 285 atm 1 7 10 ? ? mM conditions_1 ? pH ? ? K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 3 1 '3D 1H-15N NOESY' 1 isotropic 2 3 1 '3D 1H-13C NOESY' 1 isotropic 3 2 1 '3D HCCH-TOCSY' 2 isotropic 4 2 2 '3D HNCA' 1 isotropic 5 2 2 '3D HNCACB' 1 isotropic 6 3 1 '2D 1H-15N HSQC' 1 isotropic 7 2 2 '2D 1H-15N HSQC' 1 isotropic 8 3 1 '2D 1H-13C HSQC aliphatic' 1 isotropic 9 2 2 '2D 1H-13C HSQC aliphatic' 1 isotropic # _pdbx_nmr_refine.entry_id 6DST _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ;Structures are based on 363 NOE-derived distance constraints, 252 dihedral angle restraints, and 24 lower-limit distance constraints ; _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement CYANA 3.98 'Guntert, Mumenthaler and Wuthrich' 3 'chemical shift assignment' CARA 1.9.1 'Keller and Wuthrich' 4 'peak picking' CARA 1.9.1 'Keller and Wuthrich' 2 'structure calculation' CYANA 3.98 'Guntert, Mumenthaler and Wuthrich' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 GLN N N N N 41 GLN CA C N S 42 GLN C C N N 43 GLN O O N N 44 GLN CB C N N 45 GLN CG C N N 46 GLN CD C N N 47 GLN OE1 O N N 48 GLN NE2 N N N 49 GLN OXT O N N 50 GLN H H N N 51 GLN H2 H N N 52 GLN HA H N N 53 GLN HB2 H N N 54 GLN HB3 H N N 55 GLN HG2 H N N 56 GLN HG3 H N N 57 GLN HE21 H N N 58 GLN HE22 H N N 59 GLN HXT H N N 60 GLY N N N N 61 GLY CA C N N 62 GLY C C N N 63 GLY O O N N 64 GLY OXT O N N 65 GLY H H N N 66 GLY H2 H N N 67 GLY HA2 H N N 68 GLY HA3 H N N 69 GLY HXT H N N 70 ILE N N N N 71 ILE CA C N S 72 ILE C C N N 73 ILE O O N N 74 ILE CB C N S 75 ILE CG1 C N N 76 ILE CG2 C N N 77 ILE CD1 C N N 78 ILE OXT O N N 79 ILE H H N N 80 ILE H2 H N N 81 ILE HA H N N 82 ILE HB H N N 83 ILE HG12 H N N 84 ILE HG13 H N N 85 ILE HG21 H N N 86 ILE HG22 H N N 87 ILE HG23 H N N 88 ILE HD11 H N N 89 ILE HD12 H N N 90 ILE HD13 H N N 91 ILE HXT H N N 92 LEU N N N N 93 LEU CA C N S 94 LEU C C N N 95 LEU O O N N 96 LEU CB C N N 97 LEU CG C N N 98 LEU CD1 C N N 99 LEU CD2 C N N 100 LEU OXT O N N 101 LEU H H N N 102 LEU H2 H N N 103 LEU HA H N N 104 LEU HB2 H N N 105 LEU HB3 H N N 106 LEU HG H N N 107 LEU HD11 H N N 108 LEU HD12 H N N 109 LEU HD13 H N N 110 LEU HD21 H N N 111 LEU HD22 H N N 112 LEU HD23 H N N 113 LEU HXT H N N 114 LYS N N N N 115 LYS CA C N S 116 LYS C C N N 117 LYS O O N N 118 LYS CB C N N 119 LYS CG C N N 120 LYS CD C N N 121 LYS CE C N N 122 LYS NZ N N N 123 LYS OXT O N N 124 LYS H H N N 125 LYS H2 H N N 126 LYS HA H N N 127 LYS HB2 H N N 128 LYS HB3 H N N 129 LYS HG2 H N N 130 LYS HG3 H N N 131 LYS HD2 H N N 132 LYS HD3 H N N 133 LYS HE2 H N N 134 LYS HE3 H N N 135 LYS HZ1 H N N 136 LYS HZ2 H N N 137 LYS HZ3 H N N 138 LYS HXT H N N 139 PRO N N N N 140 PRO CA C N S 141 PRO C C N N 142 PRO O O N N 143 PRO CB C N N 144 PRO CG C N N 145 PRO CD C N N 146 PRO OXT O N N 147 PRO H H N N 148 PRO HA H N N 149 PRO HB2 H N N 150 PRO HB3 H N N 151 PRO HG2 H N N 152 PRO HG3 H N N 153 PRO HD2 H N N 154 PRO HD3 H N N 155 PRO HXT H N N 156 SER N N N N 157 SER CA C N S 158 SER C C N N 159 SER O O N N 160 SER CB C N N 161 SER OG O N N 162 SER OXT O N N 163 SER H H N N 164 SER H2 H N N 165 SER HA H N N 166 SER HB2 H N N 167 SER HB3 H N N 168 SER HG H N N 169 SER HXT H N N 170 THR N N N N 171 THR CA C N S 172 THR C C N N 173 THR O O N N 174 THR CB C N R 175 THR OG1 O N N 176 THR CG2 C N N 177 THR OXT O N N 178 THR H H N N 179 THR H2 H N N 180 THR HA H N N 181 THR HB H N N 182 THR HG1 H N N 183 THR HG21 H N N 184 THR HG22 H N N 185 THR HG23 H N N 186 THR HXT H N N 187 TRP N N N N 188 TRP CA C N S 189 TRP C C N N 190 TRP O O N N 191 TRP CB C N N 192 TRP CG C Y N 193 TRP CD1 C Y N 194 TRP CD2 C Y N 195 TRP NE1 N Y N 196 TRP CE2 C Y N 197 TRP CE3 C Y N 198 TRP CZ2 C Y N 199 TRP CZ3 C Y N 200 TRP CH2 C Y N 201 TRP OXT O N N 202 TRP H H N N 203 TRP H2 H N N 204 TRP HA H N N 205 TRP HB2 H N N 206 TRP HB3 H N N 207 TRP HD1 H N N 208 TRP HE1 H N N 209 TRP HE3 H N N 210 TRP HZ2 H N N 211 TRP HZ3 H N N 212 TRP HH2 H N N 213 TRP HXT H N N 214 VAL N N N N 215 VAL CA C N S 216 VAL C C N N 217 VAL O O N N 218 VAL CB C N N 219 VAL CG1 C N N 220 VAL CG2 C N N 221 VAL OXT O N N 222 VAL H H N N 223 VAL H2 H N N 224 VAL HA H N N 225 VAL HB H N N 226 VAL HG11 H N N 227 VAL HG12 H N N 228 VAL HG13 H N N 229 VAL HG21 H N N 230 VAL HG22 H N N 231 VAL HG23 H N N 232 VAL HXT H N N 233 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 GLN N CA sing N N 39 GLN N H sing N N 40 GLN N H2 sing N N 41 GLN CA C sing N N 42 GLN CA CB sing N N 43 GLN CA HA sing N N 44 GLN C O doub N N 45 GLN C OXT sing N N 46 GLN CB CG sing N N 47 GLN CB HB2 sing N N 48 GLN CB HB3 sing N N 49 GLN CG CD sing N N 50 GLN CG HG2 sing N N 51 GLN CG HG3 sing N N 52 GLN CD OE1 doub N N 53 GLN CD NE2 sing N N 54 GLN NE2 HE21 sing N N 55 GLN NE2 HE22 sing N N 56 GLN OXT HXT sing N N 57 GLY N CA sing N N 58 GLY N H sing N N 59 GLY N H2 sing N N 60 GLY CA C sing N N 61 GLY CA HA2 sing N N 62 GLY CA HA3 sing N N 63 GLY C O doub N N 64 GLY C OXT sing N N 65 GLY OXT HXT sing N N 66 ILE N CA sing N N 67 ILE N H sing N N 68 ILE N H2 sing N N 69 ILE CA C sing N N 70 ILE CA CB sing N N 71 ILE CA HA sing N N 72 ILE C O doub N N 73 ILE C OXT sing N N 74 ILE CB CG1 sing N N 75 ILE CB CG2 sing N N 76 ILE CB HB sing N N 77 ILE CG1 CD1 sing N N 78 ILE CG1 HG12 sing N N 79 ILE CG1 HG13 sing N N 80 ILE CG2 HG21 sing N N 81 ILE CG2 HG22 sing N N 82 ILE CG2 HG23 sing N N 83 ILE CD1 HD11 sing N N 84 ILE CD1 HD12 sing N N 85 ILE CD1 HD13 sing N N 86 ILE OXT HXT sing N N 87 LEU N CA sing N N 88 LEU N H sing N N 89 LEU N H2 sing N N 90 LEU CA C sing N N 91 LEU CA CB sing N N 92 LEU CA HA sing N N 93 LEU C O doub N N 94 LEU C OXT sing N N 95 LEU CB CG sing N N 96 LEU CB HB2 sing N N 97 LEU CB HB3 sing N N 98 LEU CG CD1 sing N N 99 LEU CG CD2 sing N N 100 LEU CG HG sing N N 101 LEU CD1 HD11 sing N N 102 LEU CD1 HD12 sing N N 103 LEU CD1 HD13 sing N N 104 LEU CD2 HD21 sing N N 105 LEU CD2 HD22 sing N N 106 LEU CD2 HD23 sing N N 107 LEU OXT HXT sing N N 108 LYS N CA sing N N 109 LYS N H sing N N 110 LYS N H2 sing N N 111 LYS CA C sing N N 112 LYS CA CB sing N N 113 LYS CA HA sing N N 114 LYS C O doub N N 115 LYS C OXT sing N N 116 LYS CB CG sing N N 117 LYS CB HB2 sing N N 118 LYS CB HB3 sing N N 119 LYS CG CD sing N N 120 LYS CG HG2 sing N N 121 LYS CG HG3 sing N N 122 LYS CD CE sing N N 123 LYS CD HD2 sing N N 124 LYS CD HD3 sing N N 125 LYS CE NZ sing N N 126 LYS CE HE2 sing N N 127 LYS CE HE3 sing N N 128 LYS NZ HZ1 sing N N 129 LYS NZ HZ2 sing N N 130 LYS NZ HZ3 sing N N 131 LYS OXT HXT sing N N 132 PRO N CA sing N N 133 PRO N CD sing N N 134 PRO N H sing N N 135 PRO CA C sing N N 136 PRO CA CB sing N N 137 PRO CA HA sing N N 138 PRO C O doub N N 139 PRO C OXT sing N N 140 PRO CB CG sing N N 141 PRO CB HB2 sing N N 142 PRO CB HB3 sing N N 143 PRO CG CD sing N N 144 PRO CG HG2 sing N N 145 PRO CG HG3 sing N N 146 PRO CD HD2 sing N N 147 PRO CD HD3 sing N N 148 PRO OXT HXT sing N N 149 SER N CA sing N N 150 SER N H sing N N 151 SER N H2 sing N N 152 SER CA C sing N N 153 SER CA CB sing N N 154 SER CA HA sing N N 155 SER C O doub N N 156 SER C OXT sing N N 157 SER CB OG sing N N 158 SER CB HB2 sing N N 159 SER CB HB3 sing N N 160 SER OG HG sing N N 161 SER OXT HXT sing N N 162 THR N CA sing N N 163 THR N H sing N N 164 THR N H2 sing N N 165 THR CA C sing N N 166 THR CA CB sing N N 167 THR CA HA sing N N 168 THR C O doub N N 169 THR C OXT sing N N 170 THR CB OG1 sing N N 171 THR CB CG2 sing N N 172 THR CB HB sing N N 173 THR OG1 HG1 sing N N 174 THR CG2 HG21 sing N N 175 THR CG2 HG22 sing N N 176 THR CG2 HG23 sing N N 177 THR OXT HXT sing N N 178 TRP N CA sing N N 179 TRP N H sing N N 180 TRP N H2 sing N N 181 TRP CA C sing N N 182 TRP CA CB sing N N 183 TRP CA HA sing N N 184 TRP C O doub N N 185 TRP C OXT sing N N 186 TRP CB CG sing N N 187 TRP CB HB2 sing N N 188 TRP CB HB3 sing N N 189 TRP CG CD1 doub Y N 190 TRP CG CD2 sing Y N 191 TRP CD1 NE1 sing Y N 192 TRP CD1 HD1 sing N N 193 TRP CD2 CE2 doub Y N 194 TRP CD2 CE3 sing Y N 195 TRP NE1 CE2 sing Y N 196 TRP NE1 HE1 sing N N 197 TRP CE2 CZ2 sing Y N 198 TRP CE3 CZ3 doub Y N 199 TRP CE3 HE3 sing N N 200 TRP CZ2 CH2 doub Y N 201 TRP CZ2 HZ2 sing N N 202 TRP CZ3 CH2 sing Y N 203 TRP CZ3 HZ3 sing N N 204 TRP CH2 HH2 sing N N 205 TRP OXT HXT sing N N 206 VAL N CA sing N N 207 VAL N H sing N N 208 VAL N H2 sing N N 209 VAL CA C sing N N 210 VAL CA CB sing N N 211 VAL CA HA sing N N 212 VAL C O doub N N 213 VAL C OXT sing N N 214 VAL CB CG1 sing N N 215 VAL CB CG2 sing N N 216 VAL CB HB sing N N 217 VAL CG1 HG11 sing N N 218 VAL CG1 HG12 sing N N 219 VAL CG1 HG13 sing N N 220 VAL CG2 HG21 sing N N 221 VAL CG2 HG22 sing N N 222 VAL CG2 HG23 sing N N 223 VAL OXT HXT sing N N 224 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Human Genome Research Institute (NIH/NHGRI)' 'United States' R01GM085006 1 'National Institutes of Health/National Human Genome Research Institute (NIH/NHGRI)' 'United States' R01EY010535 2 # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 'AVANCE II' ? Bruker 700 ? 2 'AVANCE III' ? Bruker 600 ? # _atom_sites.entry_id 6DST _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_