data_6DU5 # _entry.id 6DU5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.299 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6DU5 WWPDB D_1000235242 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6DU5 _pdbx_database_status.recvd_initial_deposition_date 2018-06-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Doxtader, K.' 1 ? 'Wang, P.' 2 ? 'Nam, Y.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Mol. Cell' _citation.journal_id_ASTM MOCEFL _citation.journal_id_CSD 2168 _citation.journal_id_ISSN 1097-4164 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 71 _citation.language ? _citation.page_first 1001 _citation.page_last 1011.e4 _citation.title 'Structural Basis for Regulation of METTL16, an S-Adenosylmethionine Homeostasis Factor.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.molcel.2018.07.025 _citation.pdbx_database_id_PubMed 30197297 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Doxtader, K.A.' 1 ? primary 'Wang, P.' 2 ? primary 'Scarborough, A.M.' 3 ? primary 'Seo, D.' 4 ? primary 'Conrad, N.K.' 5 ? primary 'Nam, Y.' 6 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6DU5 _cell.details ? _cell.formula_units_Z ? _cell.length_a 134.918 _cell.length_a_esd ? _cell.length_b 134.918 _cell.length_b_esd ? _cell.length_c 76.208 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6DU5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase' 36129.516 1 2.1.1.346,2.1.1.62 ? ? ? 2 polymer syn 'hp6-RNA (25-MER)' 8783.296 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Methyltransferase 10 domain-containing protein,Methyltransferase-like protein 16,N6-adenosine-methyltransferase METTL16' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes ;GSG(MSE)ALSKS(MSE)HARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLREDFGLSID IPLERLIPTVPLRLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDD(MSE)CFNYAKKN VEQNNLSDLIKVVKVPQKTLL(MSE)DALKEESEIIYDFC(MSE)CNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITE I(MSE)AEGGELEFVKRIIHDSLQLKKRLRWYSC(MSE)LGKKCSLAPLKEELRIQGVPKVTYTEFCQGRT(MSE)RWAL AWSFYDDVTVPSPPSKRRKLEKPRK ; ;GSGMALSKSMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLREDFGLSIDIPLERLIP TVPLRLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKV VKVPQKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQ LKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEKPRK ; A ? 2 polyribonucleotide no no GGCUGGUGUGGUACAGAGAAGCCAGCC GGCUGGUGUGGUACAGAGAAGCCAGCC B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 GLY n 1 4 MSE n 1 5 ALA n 1 6 LEU n 1 7 SER n 1 8 LYS n 1 9 SER n 1 10 MSE n 1 11 HIS n 1 12 ALA n 1 13 ARG n 1 14 ASN n 1 15 ARG n 1 16 TYR n 1 17 LYS n 1 18 ASP n 1 19 LYS n 1 20 PRO n 1 21 PRO n 1 22 ASP n 1 23 PHE n 1 24 ALA n 1 25 TYR n 1 26 LEU n 1 27 ALA n 1 28 SER n 1 29 LYS n 1 30 TYR n 1 31 PRO n 1 32 ASP n 1 33 PHE n 1 34 LYS n 1 35 GLN n 1 36 HIS n 1 37 VAL n 1 38 GLN n 1 39 ILE n 1 40 ASN n 1 41 LEU n 1 42 ASN n 1 43 GLY n 1 44 ARG n 1 45 VAL n 1 46 SER n 1 47 LEU n 1 48 ASN n 1 49 PHE n 1 50 LYS n 1 51 ASP n 1 52 PRO n 1 53 GLU n 1 54 ALA n 1 55 VAL n 1 56 ARG n 1 57 ALA n 1 58 LEU n 1 59 THR n 1 60 CYS n 1 61 THR n 1 62 LEU n 1 63 LEU n 1 64 ARG n 1 65 GLU n 1 66 ASP n 1 67 PHE n 1 68 GLY n 1 69 LEU n 1 70 SER n 1 71 ILE n 1 72 ASP n 1 73 ILE n 1 74 PRO n 1 75 LEU n 1 76 GLU n 1 77 ARG n 1 78 LEU n 1 79 ILE n 1 80 PRO n 1 81 THR n 1 82 VAL n 1 83 PRO n 1 84 LEU n 1 85 ARG n 1 86 LEU n 1 87 ASN n 1 88 TYR n 1 89 ILE n 1 90 HIS n 1 91 TRP n 1 92 VAL n 1 93 GLU n 1 94 ASP n 1 95 LEU n 1 96 ILE n 1 97 GLY n 1 98 HIS n 1 99 GLN n 1 100 ASP n 1 101 SER n 1 102 ASP n 1 103 LYS n 1 104 SER n 1 105 THR n 1 106 LEU n 1 107 ARG n 1 108 ARG n 1 109 GLY n 1 110 ILE n 1 111 ASP n 1 112 ILE n 1 113 GLY n 1 114 THR n 1 115 GLY n 1 116 ALA n 1 117 SER n 1 118 CYS n 1 119 ILE n 1 120 TYR n 1 121 PRO n 1 122 LEU n 1 123 LEU n 1 124 GLY n 1 125 ALA n 1 126 THR n 1 127 LEU n 1 128 ASN n 1 129 GLY n 1 130 TRP n 1 131 TYR n 1 132 PHE n 1 133 LEU n 1 134 ALA n 1 135 THR n 1 136 GLU n 1 137 VAL n 1 138 ASP n 1 139 ASP n 1 140 MSE n 1 141 CYS n 1 142 PHE n 1 143 ASN n 1 144 TYR n 1 145 ALA n 1 146 LYS n 1 147 LYS n 1 148 ASN n 1 149 VAL n 1 150 GLU n 1 151 GLN n 1 152 ASN n 1 153 ASN n 1 154 LEU n 1 155 SER n 1 156 ASP n 1 157 LEU n 1 158 ILE n 1 159 LYS n 1 160 VAL n 1 161 VAL n 1 162 LYS n 1 163 VAL n 1 164 PRO n 1 165 GLN n 1 166 LYS n 1 167 THR n 1 168 LEU n 1 169 LEU n 1 170 MSE n 1 171 ASP n 1 172 ALA n 1 173 LEU n 1 174 LYS n 1 175 GLU n 1 176 GLU n 1 177 SER n 1 178 GLU n 1 179 ILE n 1 180 ILE n 1 181 TYR n 1 182 ASP n 1 183 PHE n 1 184 CYS n 1 185 MSE n 1 186 CYS n 1 187 ASN n 1 188 PRO n 1 189 PRO n 1 190 PHE n 1 191 PHE n 1 192 ALA n 1 193 ASN n 1 194 GLN n 1 195 LEU n 1 196 GLU n 1 197 ALA n 1 198 LYS n 1 199 GLY n 1 200 VAL n 1 201 ASN n 1 202 SER n 1 203 ARG n 1 204 ASN n 1 205 PRO n 1 206 ARG n 1 207 ARG n 1 208 PRO n 1 209 PRO n 1 210 PRO n 1 211 SER n 1 212 SER n 1 213 VAL n 1 214 ASN n 1 215 THR n 1 216 GLY n 1 217 GLY n 1 218 ILE n 1 219 THR n 1 220 GLU n 1 221 ILE n 1 222 MSE n 1 223 ALA n 1 224 GLU n 1 225 GLY n 1 226 GLY n 1 227 GLU n 1 228 LEU n 1 229 GLU n 1 230 PHE n 1 231 VAL n 1 232 LYS n 1 233 ARG n 1 234 ILE n 1 235 ILE n 1 236 HIS n 1 237 ASP n 1 238 SER n 1 239 LEU n 1 240 GLN n 1 241 LEU n 1 242 LYS n 1 243 LYS n 1 244 ARG n 1 245 LEU n 1 246 ARG n 1 247 TRP n 1 248 TYR n 1 249 SER n 1 250 CYS n 1 251 MSE n 1 252 LEU n 1 253 GLY n 1 254 LYS n 1 255 LYS n 1 256 CYS n 1 257 SER n 1 258 LEU n 1 259 ALA n 1 260 PRO n 1 261 LEU n 1 262 LYS n 1 263 GLU n 1 264 GLU n 1 265 LEU n 1 266 ARG n 1 267 ILE n 1 268 GLN n 1 269 GLY n 1 270 VAL n 1 271 PRO n 1 272 LYS n 1 273 VAL n 1 274 THR n 1 275 TYR n 1 276 THR n 1 277 GLU n 1 278 PHE n 1 279 CYS n 1 280 GLN n 1 281 GLY n 1 282 ARG n 1 283 THR n 1 284 MSE n 1 285 ARG n 1 286 TRP n 1 287 ALA n 1 288 LEU n 1 289 ALA n 1 290 TRP n 1 291 SER n 1 292 PHE n 1 293 TYR n 1 294 ASP n 1 295 ASP n 1 296 VAL n 1 297 THR n 1 298 VAL n 1 299 PRO n 1 300 SER n 1 301 PRO n 1 302 PRO n 1 303 SER n 1 304 LYS n 1 305 ARG n 1 306 ARG n 1 307 LYS n 1 308 LEU n 1 309 GLU n 1 310 LYS n 1 311 PRO n 1 312 ARG n 1 313 LYS n 2 1 G n 2 2 G n 2 3 C n 2 4 U n 2 5 G n 2 6 G n 2 7 U n 2 8 G n 2 9 U n 2 10 G n 2 11 G n 2 12 U n 2 13 A n 2 14 C n 2 15 A n 2 16 G n 2 17 A n 2 18 G n 2 19 A n 2 20 A n 2 21 G n 2 22 C n 2 23 C n 2 24 A n 2 25 G n 2 26 C n 2 27 C n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 313 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'METTL16, METT10D' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 27 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP MET16_HUMAN Q86W50 ? 1 ;ALSKSMHARNRYKDKPPDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLREDFGLSIDIPLERLIPTVPL RLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVP QKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKR LRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYDDVTVPSPPSKRRKLEKPRK ; 2 2 PDB 6DU5 6DU5 ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6DU5 A 5 ? 313 ? Q86W50 2 ? 310 ? 2 310 2 2 6DU5 B 1 ? 27 ? 6DU5 1 ? 27 ? 1 27 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6DU5 GLY A 1 ? UNP Q86W50 ? ? 'expression tag' -2 1 1 6DU5 SER A 2 ? UNP Q86W50 ? ? 'expression tag' -1 2 1 6DU5 GLY A 3 ? UNP Q86W50 ? ? 'expression tag' 0 3 1 6DU5 MSE A 4 ? UNP Q86W50 ? ? 'expression tag' 1 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6DU5 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.86 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 68.14 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.1M Tris (pH 8.5), 20% glycerol, and 19% polyethylene (PEG) 10000 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 S 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-09-01 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97934 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97934 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6DU5 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 14533 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 25 _reflns.pdbx_Rmerge_I_obs 0.074 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 46 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 3 _reflns_shell.d_res_low 3.11 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1417 _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.226 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 22 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6DU5 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.006 _refine.ls_d_res_low 38.731 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 13402 _refine.ls_number_reflns_R_free 644 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 92.34 _refine.ls_percent_reflns_R_free 4.81 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2485 _refine.ls_R_factor_R_free 0.2648 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2476 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 32.21 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.47 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2239 _refine_hist.pdbx_number_atoms_nucleic_acid 542 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2781 _refine_hist.d_res_high 3.006 _refine_hist.d_res_low 38.731 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.004 ? 2900 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.794 ? 4052 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 20.120 ? 1687 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.050 ? 464 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 ? 422 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 3.0058 3.2378 . . 127 2607 96.00 . . . 0.4081 . 0.3703 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.2378 3.5634 . . 121 2518 93.00 . . . 0.3048 . 0.3196 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.5634 4.0786 . . 122 2533 92.00 . . . 0.3319 . 0.2808 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.0786 5.1367 . . 126 2525 92.00 . . . 0.2391 . 0.2331 . . . . . . . . . . 'X-RAY DIFFRACTION' 5.1367 38.7346 . . 148 2575 89.00 . . . 0.2363 . 0.2126 . . . . . . . . . . # _struct.entry_id 6DU5 _struct.title ;Crystal structure of hMettl16 catalytic domain in complex with MAT2A 3'UTR hairpin 6 ; _struct.pdbx_descriptor 'U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase/RNA Complex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6DU5 _struct_keywords.text 'm6a methylation, Methyltransferase, Protein-RNA structure, m6a, N6-methyladenosine, Transferase-RNA complex' _struct_keywords.pdbx_keywords Transferase/RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 22 ? TYR A 30 ? ASP A 19 TYR A 27 1 ? 9 HELX_P HELX_P2 AA2 TYR A 30 ? GLN A 35 ? TYR A 27 GLN A 32 1 ? 6 HELX_P HELX_P3 AA3 ASP A 51 ? GLY A 68 ? ASP A 48 GLY A 65 1 ? 18 HELX_P HELX_P4 AA4 THR A 81 ? GLY A 97 ? THR A 78 GLY A 94 1 ? 17 HELX_P HELX_P5 AA5 CYS A 118 ? GLY A 129 ? CYS A 115 GLY A 126 1 ? 12 HELX_P HELX_P6 AA6 ASP A 138 ? GLN A 151 ? ASP A 135 GLN A 148 1 ? 14 HELX_P HELX_P7 AA7 ASN A 193 ? GLY A 199 ? ASN A 190 GLY A 196 1 ? 7 HELX_P HELX_P8 AA8 GLY A 217 ? MSE A 222 ? GLY A 214 MSE A 219 1 ? 6 HELX_P HELX_P9 AA9 GLY A 225 ? LYS A 242 ? GLY A 222 LYS A 239 1 ? 18 HELX_P HELX_P10 AB1 LYS A 254 ? CYS A 256 ? LYS A 251 CYS A 253 5 ? 3 HELX_P HELX_P11 AB2 SER A 257 ? GLN A 268 ? SER A 254 GLN A 265 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? A SER 9 C ? ? ? 1_555 A MSE 10 N ? ? A SER 6 A MSE 7 1_555 ? ? ? ? ? ? ? 1.329 ? covale2 covale both ? A MSE 10 C ? ? ? 1_555 A HIS 11 N ? ? A MSE 7 A HIS 8 1_555 ? ? ? ? ? ? ? 1.331 ? covale3 covale both ? A ASP 139 C ? ? ? 1_555 A MSE 140 N ? ? A ASP 136 A MSE 137 1_555 ? ? ? ? ? ? ? 1.329 ? covale4 covale both ? A MSE 140 C ? ? ? 1_555 A CYS 141 N ? ? A MSE 137 A CYS 138 1_555 ? ? ? ? ? ? ? 1.333 ? covale5 covale both ? A LEU 169 C ? ? ? 1_555 A MSE 170 N ? ? A LEU 166 A MSE 167 1_555 ? ? ? ? ? ? ? 1.332 ? covale6 covale both ? A MSE 170 C ? ? ? 1_555 A ASP 171 N ? ? A MSE 167 A ASP 168 1_555 ? ? ? ? ? ? ? 1.328 ? covale7 covale both ? A CYS 184 C ? ? ? 1_555 A MSE 185 N ? ? A CYS 181 A MSE 182 1_555 ? ? ? ? ? ? ? 1.326 ? covale8 covale both ? A MSE 185 C ? ? ? 1_555 A CYS 186 N ? ? A MSE 182 A CYS 183 1_555 ? ? ? ? ? ? ? 1.332 ? covale9 covale both ? A ILE 221 C ? ? ? 1_555 A MSE 222 N ? ? A ILE 218 A MSE 219 1_555 ? ? ? ? ? ? ? 1.329 ? covale10 covale both ? A MSE 222 C ? ? ? 1_555 A ALA 223 N ? ? A MSE 219 A ALA 220 1_555 ? ? ? ? ? ? ? 1.331 ? covale11 covale both ? A CYS 250 C ? ? ? 1_555 A MSE 251 N ? ? A CYS 247 A MSE 248 1_555 ? ? ? ? ? ? ? 1.329 ? covale12 covale both ? A MSE 251 C ? ? ? 1_555 A LEU 252 N ? ? A MSE 248 A LEU 249 1_555 ? ? ? ? ? ? ? 1.330 ? covale13 covale both ? A THR 283 C ? ? ? 1_555 A MSE 284 N ? ? A THR 280 A MSE 281 1_555 ? ? ? ? ? ? ? 1.328 ? covale14 covale both ? A MSE 284 C ? ? ? 1_555 A ARG 285 N ? ? A MSE 281 A ARG 282 1_555 ? ? ? ? ? ? ? 1.328 ? hydrog1 hydrog ? ? B U 4 N3 ? ? ? 1_555 B G 25 O6 ? ? B U 4 B G 25 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? hydrog2 hydrog ? ? B G 5 N2 ? ? ? 1_555 B C 23 N3 ? ? B G 5 B C 23 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? hydrog3 hydrog ? ? B G 5 N1 ? ? ? 1_555 B A 24 N1 ? ? B G 5 B A 24 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? hydrog4 hydrog ? ? B G 6 N1 ? ? ? 1_555 B C 22 N3 ? ? B G 6 B C 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? B G 6 N2 ? ? ? 1_555 B C 22 O2 ? ? B G 6 B C 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? B G 6 O6 ? ? ? 1_555 B C 22 N4 ? ? B G 6 B C 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? B U 7 N3 ? ? ? 1_555 B G 21 O6 ? ? B U 7 B G 21 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? hydrog8 hydrog ? ? B U 7 O2 ? ? ? 1_555 B G 21 N1 ? ? B U 7 B G 21 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? hydrog9 hydrog ? ? B G 8 N2 ? ? ? 1_555 B A 20 N7 ? ? B G 8 B A 20 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? hydrog10 hydrog ? ? B G 8 N3 ? ? ? 1_555 B A 20 N6 ? ? B G 8 B A 20 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? hydrog11 hydrog ? ? B U 9 N3 ? ? ? 1_555 B A 17 N1 ? ? B U 9 B A 17 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? hydrog12 hydrog ? ? B U 9 O2 ? ? ? 1_555 B A 17 N6 ? ? B U 9 B A 17 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? hydrog13 hydrog ? ? B U 9 N3 ? ? ? 1_555 B A 19 N7 ? ? B U 9 B A 19 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? hydrog14 hydrog ? ? B U 9 O2 ? ? ? 1_555 B A 19 N6 ? ? B U 9 B A 19 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA2 3 4 ? parallel AA2 4 5 ? parallel AA2 5 6 ? anti-parallel AA2 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLN A 38 ? ASN A 40 ? GLN A 35 ASN A 37 AA1 2 ARG A 44 ? SER A 46 ? ARG A 41 SER A 43 AA2 1 ILE A 158 ? LYS A 162 ? ILE A 155 LYS A 159 AA2 2 TYR A 131 ? GLU A 136 ? TYR A 128 GLU A 133 AA2 3 ARG A 108 ? ILE A 112 ? ARG A 105 ILE A 109 AA2 4 TYR A 181 ? CYS A 186 ? TYR A 178 CYS A 183 AA2 5 LEU A 245 ? LEU A 252 ? LEU A 242 LEU A 249 AA2 6 MSE A 284 ? SER A 291 ? MSE A 281 SER A 288 AA2 7 LYS A 272 ? CYS A 279 ? LYS A 269 CYS A 276 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ASN A 40 ? N ASN A 37 O ARG A 44 ? O ARG A 41 AA2 1 2 O VAL A 161 ? O VAL A 158 N ALA A 134 ? N ALA A 131 AA2 2 3 O TYR A 131 ? O TYR A 128 N GLY A 109 ? N GLY A 106 AA2 3 4 N ILE A 110 ? N ILE A 107 O MSE A 185 ? O MSE A 182 AA2 4 5 N TYR A 181 ? N TYR A 178 O ARG A 246 ? O ARG A 243 AA2 5 6 N LEU A 252 ? N LEU A 249 O TRP A 286 ? O TRP A 283 AA2 6 7 O ARG A 285 ? O ARG A 282 N PHE A 278 ? N PHE A 275 # _atom_sites.entry_id 6DU5 _atom_sites.fract_transf_matrix[1][1] 0.007412 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007412 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013122 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -2 ? ? ? A . n A 1 2 SER 2 -1 ? ? ? A . n A 1 3 GLY 3 0 ? ? ? A . n A 1 4 MSE 4 1 ? ? ? A . n A 1 5 ALA 5 2 ? ? ? A . n A 1 6 LEU 6 3 ? ? ? A . n A 1 7 SER 7 4 ? ? ? A . n A 1 8 LYS 8 5 5 LYS LYS A . n A 1 9 SER 9 6 6 SER SER A . n A 1 10 MSE 10 7 7 MSE MSE A . n A 1 11 HIS 11 8 8 HIS HIS A . n A 1 12 ALA 12 9 9 ALA ALA A . n A 1 13 ARG 13 10 10 ARG ARG A . n A 1 14 ASN 14 11 11 ASN ASN A . n A 1 15 ARG 15 12 12 ARG ARG A . n A 1 16 TYR 16 13 13 TYR TYR A . n A 1 17 LYS 17 14 14 LYS LYS A . n A 1 18 ASP 18 15 15 ASP ASP A . n A 1 19 LYS 19 16 16 LYS LYS A . n A 1 20 PRO 20 17 17 PRO PRO A . n A 1 21 PRO 21 18 18 PRO PRO A . n A 1 22 ASP 22 19 19 ASP ASP A . n A 1 23 PHE 23 20 20 PHE PHE A . n A 1 24 ALA 24 21 21 ALA ALA A . n A 1 25 TYR 25 22 22 TYR TYR A . n A 1 26 LEU 26 23 23 LEU LEU A . n A 1 27 ALA 27 24 24 ALA ALA A . n A 1 28 SER 28 25 25 SER SER A . n A 1 29 LYS 29 26 26 LYS LYS A . n A 1 30 TYR 30 27 27 TYR TYR A . n A 1 31 PRO 31 28 28 PRO PRO A . n A 1 32 ASP 32 29 29 ASP ASP A . n A 1 33 PHE 33 30 30 PHE PHE A . n A 1 34 LYS 34 31 31 LYS LYS A . n A 1 35 GLN 35 32 32 GLN GLN A . n A 1 36 HIS 36 33 33 HIS HIS A . n A 1 37 VAL 37 34 34 VAL VAL A . n A 1 38 GLN 38 35 35 GLN GLN A . n A 1 39 ILE 39 36 36 ILE ILE A . n A 1 40 ASN 40 37 37 ASN ASN A . n A 1 41 LEU 41 38 38 LEU LEU A . n A 1 42 ASN 42 39 39 ASN ASN A . n A 1 43 GLY 43 40 40 GLY GLY A . n A 1 44 ARG 44 41 41 ARG ARG A . n A 1 45 VAL 45 42 42 VAL VAL A . n A 1 46 SER 46 43 43 SER SER A . n A 1 47 LEU 47 44 44 LEU LEU A . n A 1 48 ASN 48 45 45 ASN ASN A . n A 1 49 PHE 49 46 46 PHE PHE A . n A 1 50 LYS 50 47 47 LYS LYS A . n A 1 51 ASP 51 48 48 ASP ASP A . n A 1 52 PRO 52 49 49 PRO PRO A . n A 1 53 GLU 53 50 50 GLU GLU A . n A 1 54 ALA 54 51 51 ALA ALA A . n A 1 55 VAL 55 52 52 VAL VAL A . n A 1 56 ARG 56 53 53 ARG ARG A . n A 1 57 ALA 57 54 54 ALA ALA A . n A 1 58 LEU 58 55 55 LEU LEU A . n A 1 59 THR 59 56 56 THR THR A . n A 1 60 CYS 60 57 57 CYS CYS A . n A 1 61 THR 61 58 58 THR THR A . n A 1 62 LEU 62 59 59 LEU LEU A . n A 1 63 LEU 63 60 60 LEU LEU A . n A 1 64 ARG 64 61 61 ARG ARG A . n A 1 65 GLU 65 62 62 GLU GLU A . n A 1 66 ASP 66 63 63 ASP ASP A . n A 1 67 PHE 67 64 64 PHE PHE A . n A 1 68 GLY 68 65 65 GLY GLY A . n A 1 69 LEU 69 66 66 LEU LEU A . n A 1 70 SER 70 67 67 SER SER A . n A 1 71 ILE 71 68 68 ILE ILE A . n A 1 72 ASP 72 69 69 ASP ASP A . n A 1 73 ILE 73 70 70 ILE ILE A . n A 1 74 PRO 74 71 71 PRO PRO A . n A 1 75 LEU 75 72 72 LEU LEU A . n A 1 76 GLU 76 73 73 GLU GLU A . n A 1 77 ARG 77 74 74 ARG ARG A . n A 1 78 LEU 78 75 75 LEU LEU A . n A 1 79 ILE 79 76 76 ILE ILE A . n A 1 80 PRO 80 77 77 PRO PRO A . n A 1 81 THR 81 78 78 THR THR A . n A 1 82 VAL 82 79 79 VAL VAL A . n A 1 83 PRO 83 80 80 PRO PRO A . n A 1 84 LEU 84 81 81 LEU LEU A . n A 1 85 ARG 85 82 82 ARG ARG A . n A 1 86 LEU 86 83 83 LEU LEU A . n A 1 87 ASN 87 84 84 ASN ASN A . n A 1 88 TYR 88 85 85 TYR TYR A . n A 1 89 ILE 89 86 86 ILE ILE A . n A 1 90 HIS 90 87 87 HIS HIS A . n A 1 91 TRP 91 88 88 TRP TRP A . n A 1 92 VAL 92 89 89 VAL VAL A . n A 1 93 GLU 93 90 90 GLU GLU A . n A 1 94 ASP 94 91 91 ASP ASP A . n A 1 95 LEU 95 92 92 LEU LEU A . n A 1 96 ILE 96 93 93 ILE ILE A . n A 1 97 GLY 97 94 94 GLY GLY A . n A 1 98 HIS 98 95 95 HIS HIS A . n A 1 99 GLN 99 96 ? ? ? A . n A 1 100 ASP 100 97 ? ? ? A . n A 1 101 SER 101 98 ? ? ? A . n A 1 102 ASP 102 99 ? ? ? A . n A 1 103 LYS 103 100 ? ? ? A . n A 1 104 SER 104 101 ? ? ? A . n A 1 105 THR 105 102 102 THR THR A . n A 1 106 LEU 106 103 103 LEU LEU A . n A 1 107 ARG 107 104 104 ARG ARG A . n A 1 108 ARG 108 105 105 ARG ARG A . n A 1 109 GLY 109 106 106 GLY GLY A . n A 1 110 ILE 110 107 107 ILE ILE A . n A 1 111 ASP 111 108 108 ASP ASP A . n A 1 112 ILE 112 109 109 ILE ILE A . n A 1 113 GLY 113 110 110 GLY GLY A . n A 1 114 THR 114 111 111 THR THR A . n A 1 115 GLY 115 112 112 GLY GLY A . n A 1 116 ALA 116 113 113 ALA ALA A . n A 1 117 SER 117 114 114 SER SER A . n A 1 118 CYS 118 115 115 CYS CYS A . n A 1 119 ILE 119 116 116 ILE ILE A . n A 1 120 TYR 120 117 117 TYR TYR A . n A 1 121 PRO 121 118 118 PRO PRO A . n A 1 122 LEU 122 119 119 LEU LEU A . n A 1 123 LEU 123 120 120 LEU LEU A . n A 1 124 GLY 124 121 121 GLY GLY A . n A 1 125 ALA 125 122 122 ALA ALA A . n A 1 126 THR 126 123 123 THR THR A . n A 1 127 LEU 127 124 124 LEU LEU A . n A 1 128 ASN 128 125 125 ASN ASN A . n A 1 129 GLY 129 126 126 GLY GLY A . n A 1 130 TRP 130 127 127 TRP TRP A . n A 1 131 TYR 131 128 128 TYR TYR A . n A 1 132 PHE 132 129 129 PHE PHE A . n A 1 133 LEU 133 130 130 LEU LEU A . n A 1 134 ALA 134 131 131 ALA ALA A . n A 1 135 THR 135 132 132 THR THR A . n A 1 136 GLU 136 133 133 GLU GLU A . n A 1 137 VAL 137 134 134 VAL VAL A . n A 1 138 ASP 138 135 135 ASP ASP A . n A 1 139 ASP 139 136 136 ASP ASP A . n A 1 140 MSE 140 137 137 MSE MSE A . n A 1 141 CYS 141 138 138 CYS CYS A . n A 1 142 PHE 142 139 139 PHE PHE A . n A 1 143 ASN 143 140 140 ASN ASN A . n A 1 144 TYR 144 141 141 TYR TYR A . n A 1 145 ALA 145 142 142 ALA ALA A . n A 1 146 LYS 146 143 143 LYS LYS A . n A 1 147 LYS 147 144 144 LYS LYS A . n A 1 148 ASN 148 145 145 ASN ASN A . n A 1 149 VAL 149 146 146 VAL VAL A . n A 1 150 GLU 150 147 147 GLU GLU A . n A 1 151 GLN 151 148 148 GLN GLN A . n A 1 152 ASN 152 149 149 ASN ASN A . n A 1 153 ASN 153 150 150 ASN ASN A . n A 1 154 LEU 154 151 151 LEU LEU A . n A 1 155 SER 155 152 152 SER SER A . n A 1 156 ASP 156 153 153 ASP ASP A . n A 1 157 LEU 157 154 154 LEU LEU A . n A 1 158 ILE 158 155 155 ILE ILE A . n A 1 159 LYS 159 156 156 LYS LYS A . n A 1 160 VAL 160 157 157 VAL VAL A . n A 1 161 VAL 161 158 158 VAL VAL A . n A 1 162 LYS 162 159 159 LYS LYS A . n A 1 163 VAL 163 160 160 VAL VAL A . n A 1 164 PRO 164 161 161 PRO PRO A . n A 1 165 GLN 165 162 162 GLN GLN A . n A 1 166 LYS 166 163 163 LYS LYS A . n A 1 167 THR 167 164 164 THR THR A . n A 1 168 LEU 168 165 165 LEU LEU A . n A 1 169 LEU 169 166 166 LEU LEU A . n A 1 170 MSE 170 167 167 MSE MSE A . n A 1 171 ASP 171 168 168 ASP ASP A . n A 1 172 ALA 172 169 ? ? ? A . n A 1 173 LEU 173 170 ? ? ? A . n A 1 174 LYS 174 171 ? ? ? A . n A 1 175 GLU 175 172 ? ? ? A . n A 1 176 GLU 176 173 ? ? ? A . n A 1 177 SER 177 174 ? ? ? A . n A 1 178 GLU 178 175 ? ? ? A . n A 1 179 ILE 179 176 ? ? ? A . n A 1 180 ILE 180 177 177 ILE ILE A . n A 1 181 TYR 181 178 178 TYR TYR A . n A 1 182 ASP 182 179 179 ASP ASP A . n A 1 183 PHE 183 180 180 PHE PHE A . n A 1 184 CYS 184 181 181 CYS CYS A . n A 1 185 MSE 185 182 182 MSE MSE A . n A 1 186 CYS 186 183 183 CYS CYS A . n A 1 187 ASN 187 184 184 ASN ASN A . n A 1 188 PRO 188 185 185 PRO PRO A . n A 1 189 PRO 189 186 186 PRO PRO A . n A 1 190 PHE 190 187 187 PHE PHE A . n A 1 191 PHE 191 188 188 PHE PHE A . n A 1 192 ALA 192 189 189 ALA ALA A . n A 1 193 ASN 193 190 190 ASN ASN A . n A 1 194 GLN 194 191 191 GLN GLN A . n A 1 195 LEU 195 192 192 LEU LEU A . n A 1 196 GLU 196 193 193 GLU GLU A . n A 1 197 ALA 197 194 194 ALA ALA A . n A 1 198 LYS 198 195 195 LYS LYS A . n A 1 199 GLY 199 196 196 GLY GLY A . n A 1 200 VAL 200 197 197 VAL VAL A . n A 1 201 ASN 201 198 198 ASN ASN A . n A 1 202 SER 202 199 199 SER SER A . n A 1 203 ARG 203 200 200 ARG ARG A . n A 1 204 ASN 204 201 201 ASN ASN A . n A 1 205 PRO 205 202 202 PRO PRO A . n A 1 206 ARG 206 203 203 ARG ARG A . n A 1 207 ARG 207 204 204 ARG ARG A . n A 1 208 PRO 208 205 205 PRO PRO A . n A 1 209 PRO 209 206 206 PRO PRO A . n A 1 210 PRO 210 207 207 PRO PRO A . n A 1 211 SER 211 208 208 SER SER A . n A 1 212 SER 212 209 209 SER SER A . n A 1 213 VAL 213 210 210 VAL VAL A . n A 1 214 ASN 214 211 211 ASN ASN A . n A 1 215 THR 215 212 212 THR THR A . n A 1 216 GLY 216 213 213 GLY GLY A . n A 1 217 GLY 217 214 214 GLY GLY A . n A 1 218 ILE 218 215 215 ILE ILE A . n A 1 219 THR 219 216 216 THR THR A . n A 1 220 GLU 220 217 217 GLU GLU A . n A 1 221 ILE 221 218 218 ILE ILE A . n A 1 222 MSE 222 219 219 MSE MSE A . n A 1 223 ALA 223 220 220 ALA ALA A . n A 1 224 GLU 224 221 221 GLU GLU A . n A 1 225 GLY 225 222 222 GLY GLY A . n A 1 226 GLY 226 223 223 GLY GLY A . n A 1 227 GLU 227 224 224 GLU GLU A . n A 1 228 LEU 228 225 225 LEU LEU A . n A 1 229 GLU 229 226 226 GLU GLU A . n A 1 230 PHE 230 227 227 PHE PHE A . n A 1 231 VAL 231 228 228 VAL VAL A . n A 1 232 LYS 232 229 229 LYS LYS A . n A 1 233 ARG 233 230 230 ARG ARG A . n A 1 234 ILE 234 231 231 ILE ILE A . n A 1 235 ILE 235 232 232 ILE ILE A . n A 1 236 HIS 236 233 233 HIS HIS A . n A 1 237 ASP 237 234 234 ASP ASP A . n A 1 238 SER 238 235 235 SER SER A . n A 1 239 LEU 239 236 236 LEU LEU A . n A 1 240 GLN 240 237 237 GLN GLN A . n A 1 241 LEU 241 238 238 LEU LEU A . n A 1 242 LYS 242 239 239 LYS LYS A . n A 1 243 LYS 243 240 240 LYS LYS A . n A 1 244 ARG 244 241 241 ARG ARG A . n A 1 245 LEU 245 242 242 LEU LEU A . n A 1 246 ARG 246 243 243 ARG ARG A . n A 1 247 TRP 247 244 244 TRP TRP A . n A 1 248 TYR 248 245 245 TYR TYR A . n A 1 249 SER 249 246 246 SER SER A . n A 1 250 CYS 250 247 247 CYS CYS A . n A 1 251 MSE 251 248 248 MSE MSE A . n A 1 252 LEU 252 249 249 LEU LEU A . n A 1 253 GLY 253 250 250 GLY GLY A . n A 1 254 LYS 254 251 251 LYS LYS A . n A 1 255 LYS 255 252 252 LYS LYS A . n A 1 256 CYS 256 253 253 CYS CYS A . n A 1 257 SER 257 254 254 SER SER A . n A 1 258 LEU 258 255 255 LEU LEU A . n A 1 259 ALA 259 256 256 ALA ALA A . n A 1 260 PRO 260 257 257 PRO PRO A . n A 1 261 LEU 261 258 258 LEU LEU A . n A 1 262 LYS 262 259 259 LYS LYS A . n A 1 263 GLU 263 260 260 GLU GLU A . n A 1 264 GLU 264 261 261 GLU GLU A . n A 1 265 LEU 265 262 262 LEU LEU A . n A 1 266 ARG 266 263 263 ARG ARG A . n A 1 267 ILE 267 264 264 ILE ILE A . n A 1 268 GLN 268 265 265 GLN GLN A . n A 1 269 GLY 269 266 266 GLY GLY A . n A 1 270 VAL 270 267 267 VAL VAL A . n A 1 271 PRO 271 268 268 PRO PRO A . n A 1 272 LYS 272 269 269 LYS LYS A . n A 1 273 VAL 273 270 270 VAL VAL A . n A 1 274 THR 274 271 271 THR THR A . n A 1 275 TYR 275 272 272 TYR TYR A . n A 1 276 THR 276 273 273 THR THR A . n A 1 277 GLU 277 274 274 GLU GLU A . n A 1 278 PHE 278 275 275 PHE PHE A . n A 1 279 CYS 279 276 276 CYS CYS A . n A 1 280 GLN 280 277 277 GLN GLN A . n A 1 281 GLY 281 278 278 GLY GLY A . n A 1 282 ARG 282 279 279 ARG ARG A . n A 1 283 THR 283 280 280 THR THR A . n A 1 284 MSE 284 281 281 MSE MSE A . n A 1 285 ARG 285 282 282 ARG ARG A . n A 1 286 TRP 286 283 283 TRP TRP A . n A 1 287 ALA 287 284 284 ALA ALA A . n A 1 288 LEU 288 285 285 LEU LEU A . n A 1 289 ALA 289 286 286 ALA ALA A . n A 1 290 TRP 290 287 287 TRP TRP A . n A 1 291 SER 291 288 288 SER SER A . n A 1 292 PHE 292 289 289 PHE PHE A . n A 1 293 TYR 293 290 290 TYR TYR A . n A 1 294 ASP 294 291 291 ASP ASP A . n A 1 295 ASP 295 292 292 ASP ASP A . n A 1 296 VAL 296 293 293 VAL VAL A . n A 1 297 THR 297 294 294 THR THR A . n A 1 298 VAL 298 295 295 VAL VAL A . n A 1 299 PRO 299 296 296 PRO PRO A . n A 1 300 SER 300 297 ? ? ? A . n A 1 301 PRO 301 298 ? ? ? A . n A 1 302 PRO 302 299 ? ? ? A . n A 1 303 SER 303 300 ? ? ? A . n A 1 304 LYS 304 301 ? ? ? A . n A 1 305 ARG 305 302 ? ? ? A . n A 1 306 ARG 306 303 ? ? ? A . n A 1 307 LYS 307 304 ? ? ? A . n A 1 308 LEU 308 305 ? ? ? A . n A 1 309 GLU 309 306 ? ? ? A . n A 1 310 LYS 310 307 ? ? ? A . n A 1 311 PRO 311 308 ? ? ? A . n A 1 312 ARG 312 309 ? ? ? A . n A 1 313 LYS 313 310 ? ? ? A . n B 2 1 G 1 1 1 G G B . n B 2 2 G 2 2 2 G G B . n B 2 3 C 3 3 3 C C B . n B 2 4 U 4 4 4 U U B . n B 2 5 G 5 5 5 G G B . n B 2 6 G 6 6 6 G G B . n B 2 7 U 7 7 7 U U B . n B 2 8 G 8 8 8 G G B . n B 2 9 U 9 9 9 U U B . n B 2 10 G 10 10 10 G G B . n B 2 11 G 11 11 11 G G B . n B 2 12 U 12 12 12 U U B . n B 2 13 A 13 13 13 A A B . n B 2 14 C 14 14 14 C C B . n B 2 15 A 15 15 15 A A B . n B 2 16 G 16 16 16 G G B . n B 2 17 A 17 17 17 A A B . n B 2 18 G 18 18 18 G G B . n B 2 19 A 19 19 19 A A B . n B 2 20 A 20 20 20 A A B . n B 2 21 G 21 21 21 G G B . n B 2 22 C 22 22 22 C C B . n B 2 23 C 23 23 23 C C B . n B 2 24 A 24 24 24 A A B . n B 2 25 G 25 25 25 G G B . n B 2 26 C 26 26 ? ? ? B . n B 2 27 C 27 27 ? ? ? B . n # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 10 A MSE 7 ? MET 'modified residue' 2 A MSE 140 A MSE 137 ? MET 'modified residue' 3 A MSE 170 A MSE 167 ? MET 'modified residue' 4 A MSE 185 A MSE 182 ? MET 'modified residue' 5 A MSE 222 A MSE 219 ? MET 'modified residue' 6 A MSE 251 A MSE 248 ? MET 'modified residue' 7 A MSE 284 A MSE 281 ? MET 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3720 ? 1 MORE -19 ? 1 'SSA (A^2)' 15620 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-09-26 2 'Structure model' 1 1 2018-10-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.10_2155: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 38 ? ? -5.81 -53.67 2 1 ASN A 198 ? ? -76.37 49.96 3 1 ARG A 203 ? ? -79.75 21.79 4 1 LYS A 239 ? ? 50.76 -98.13 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -2 ? A GLY 1 2 1 Y 1 A SER -1 ? A SER 2 3 1 Y 1 A GLY 0 ? A GLY 3 4 1 Y 1 A MSE 1 ? A MSE 4 5 1 Y 1 A ALA 2 ? A ALA 5 6 1 Y 1 A LEU 3 ? A LEU 6 7 1 Y 1 A SER 4 ? A SER 7 8 1 Y 1 A GLN 96 ? A GLN 99 9 1 Y 1 A ASP 97 ? A ASP 100 10 1 Y 1 A SER 98 ? A SER 101 11 1 Y 1 A ASP 99 ? A ASP 102 12 1 Y 1 A LYS 100 ? A LYS 103 13 1 Y 1 A SER 101 ? A SER 104 14 1 Y 1 A ALA 169 ? A ALA 172 15 1 Y 1 A LEU 170 ? A LEU 173 16 1 Y 1 A LYS 171 ? A LYS 174 17 1 Y 1 A GLU 172 ? A GLU 175 18 1 Y 1 A GLU 173 ? A GLU 176 19 1 Y 1 A SER 174 ? A SER 177 20 1 Y 1 A GLU 175 ? A GLU 178 21 1 Y 1 A ILE 176 ? A ILE 179 22 1 Y 1 A SER 297 ? A SER 300 23 1 Y 1 A PRO 298 ? A PRO 301 24 1 Y 1 A PRO 299 ? A PRO 302 25 1 Y 1 A SER 300 ? A SER 303 26 1 Y 1 A LYS 301 ? A LYS 304 27 1 Y 1 A ARG 302 ? A ARG 305 28 1 Y 1 A ARG 303 ? A ARG 306 29 1 Y 1 A LYS 304 ? A LYS 307 30 1 Y 1 A LEU 305 ? A LEU 308 31 1 Y 1 A GLU 306 ? A GLU 309 32 1 Y 1 A LYS 307 ? A LYS 310 33 1 Y 1 A PRO 308 ? A PRO 311 34 1 Y 1 A ARG 309 ? A ARG 312 35 1 Y 1 A LYS 310 ? A LYS 313 36 1 Y 1 B C 26 ? B C 26 37 1 Y 1 B C 27 ? B C 27 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6DU5 'double helix' 6DU5 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B U 4 1_555 B G 25 1_555 1.918 -0.980 2.046 29.112 46.034 53.212 1 B_U4:G25_B B 4 ? B 25 ? ? ? 1 B G 5 1_555 B C 23 1_555 2.573 0.475 -0.863 -5.901 14.359 6.982 2 B_G5:C23_B B 5 ? B 23 ? ? ? 1 B G 6 1_555 B C 22 1_555 0.723 -0.128 -0.557 -4.259 -11.202 -11.196 3 B_G6:C22_B B 6 ? B 22 ? 19 1 1 B U 7 1_555 B G 21 1_555 2.078 -0.932 0.233 -8.766 -13.859 -0.361 4 B_U7:G21_B B 7 ? B 21 ? 28 1 1 B G 8 1_555 B A 20 1_555 6.651 -3.886 -0.049 -4.834 -30.099 6.611 5 B_G8:A20_B B 8 ? B 20 ? 11 9 1 B U 9 1_555 B A 17 1_555 -0.092 -0.693 -1.553 -5.395 -26.527 -164.498 6 B_U9:A17_B B 9 ? B 17 ? 21 2 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B U 4 1_555 B G 25 1_555 B G 5 1_555 B C 23 1_555 -1.409 -2.870 4.333 23.456 35.072 67.441 -3.380 1.856 2.309 28.925 -19.345 78.207 1 BB_U4G5:C23G25_BB B 4 ? B 25 ? B 5 ? B 23 ? 1 B G 5 1_555 B C 23 1_555 B G 6 1_555 B C 22 1_555 -2.132 -1.615 3.400 -4.184 7.763 21.843 -6.612 3.797 3.007 19.494 10.507 23.536 2 BB_G5G6:C22C23_BB B 5 ? B 23 ? B 6 ? B 22 ? 1 B G 6 1_555 B C 22 1_555 B U 7 1_555 B G 21 1_555 0.092 -2.086 3.382 -6.472 5.114 39.056 -3.644 -0.877 3.044 7.547 9.551 39.884 3 BB_G6U7:G21C22_BB B 6 ? B 22 ? B 7 ? B 21 ? 1 B U 7 1_555 B G 21 1_555 B G 8 1_555 B A 20 1_555 -0.590 -0.229 3.647 9.765 1.689 55.994 -0.344 1.218 3.500 1.784 -10.311 56.794 4 BB_U7G8:A20G21_BB B 7 ? B 21 ? B 8 ? B 20 ? 1 B G 8 1_555 B A 20 1_555 B U 9 1_555 B A 17 1_555 -0.411 -1.683 5.622 2.407 -3.937 76.040 -1.163 0.456 5.678 -3.193 -1.952 76.158 5 BB_G8U9:A17A20_BB B 8 ? B 20 ? B 9 ? B 17 ? # _pdbx_audit_support.funding_organization ? _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'light scattering' _pdbx_struct_assembly_auth_evidence.details ? #