HEADER HYDROLASE, PROTEIN BINDING 28-JUN-18 6DX1 TITLE CRYSTAL STRUCTURE OF THE VIRAL OTU DOMAIN PROTEASE FROM QALYUB VIRUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA-DEPENDENT RNA POLYMERASE; COMPND 3 CHAIN: B, A, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: QUALYUB VIRUS; SOURCE 3 ORGANISM_TAXID: 1810949; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS VIRAL OTU, DUB, HYDROLASE, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR J.V.DZIMIANSKI,B.S.BELDON,C.M.DACZKOWSKI,O.Y.GOODWIN,S.D.PEGAN REVDAT 4 11-OCT-23 6DX1 1 REMARK REVDAT 3 18-DEC-19 6DX1 1 REMARK REVDAT 2 23-JAN-19 6DX1 1 JRNL REVDAT 1 19-DEC-18 6DX1 0 JRNL AUTH J.V.DZIMIANSKI,B.S.BELDON,C.M.DACZKOWSKI,O.Y.GOODWIN, JRNL AUTH 2 F.E.M.SCHOLTE,E.BERGERON,S.D.PEGAN JRNL TITL PROBING THE IMPACT OF NAIROVIRUS GENOMIC DIVERSITY ON VIRAL JRNL TITL 2 OVARIAN TUMOR DOMAIN PROTEASE (VOTU) STRUCTURE AND JRNL TITL 3 DEUBIQUITINASE ACTIVITY. JRNL REF PLOS PATHOG. V. 15 07515 2019 JRNL REFN ESSN 1553-7374 JRNL PMID 30629698 JRNL DOI 10.1371/JOURNAL.PPAT.1007515 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.29 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 89729 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 4570 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.2958 - 5.1301 1.00 3021 165 0.1823 0.2035 REMARK 3 2 5.1301 - 4.0734 1.00 2912 156 0.1488 0.1542 REMARK 3 3 4.0734 - 3.5589 1.00 2888 144 0.1527 0.1698 REMARK 3 4 3.5589 - 3.2337 1.00 2879 166 0.1602 0.1648 REMARK 3 5 3.2337 - 3.0021 1.00 2854 156 0.1683 0.2034 REMARK 3 6 3.0021 - 2.8251 1.00 2891 129 0.1719 0.1783 REMARK 3 7 2.8251 - 2.6837 1.00 2846 164 0.1842 0.1753 REMARK 3 8 2.6837 - 2.5669 1.00 2830 150 0.1864 0.2182 REMARK 3 9 2.5669 - 2.4681 1.00 2855 132 0.1805 0.1937 REMARK 3 10 2.4681 - 2.3829 1.00 2800 207 0.1768 0.1906 REMARK 3 11 2.3829 - 2.3084 1.00 2831 157 0.1738 0.2008 REMARK 3 12 2.3084 - 2.2424 1.00 2823 171 0.1695 0.1918 REMARK 3 13 2.2424 - 2.1834 1.00 2828 156 0.1641 0.1941 REMARK 3 14 2.1834 - 2.1302 1.00 2788 172 0.1661 0.1786 REMARK 3 15 2.1302 - 2.0817 1.00 2848 131 0.1646 0.1715 REMARK 3 16 2.0817 - 2.0374 1.00 2854 153 0.1704 0.1803 REMARK 3 17 2.0374 - 1.9967 1.00 2811 150 0.1671 0.1708 REMARK 3 18 1.9967 - 1.9590 1.00 2852 125 0.1704 0.1796 REMARK 3 19 1.9590 - 1.9240 1.00 2841 147 0.1727 0.1942 REMARK 3 20 1.9240 - 1.8914 1.00 2771 161 0.1770 0.1745 REMARK 3 21 1.8914 - 1.8609 1.00 2851 138 0.1665 0.1779 REMARK 3 22 1.8609 - 1.8323 1.00 2808 159 0.1756 0.1870 REMARK 3 23 1.8323 - 1.8053 1.00 2835 125 0.1870 0.2245 REMARK 3 24 1.8053 - 1.7799 1.00 2785 167 0.1879 0.2152 REMARK 3 25 1.7799 - 1.7558 1.00 2847 138 0.2037 0.2140 REMARK 3 26 1.7558 - 1.7330 1.00 2839 162 0.2150 0.2256 REMARK 3 27 1.7330 - 1.7114 1.00 2762 155 0.2239 0.2636 REMARK 3 28 1.7114 - 1.6908 1.00 2820 152 0.2157 0.2245 REMARK 3 29 1.6908 - 1.6711 1.00 2832 117 0.2314 0.2374 REMARK 3 30 1.6711 - 1.6523 0.98 2757 165 0.2395 0.2714 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.560 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3964 REMARK 3 ANGLE : 0.757 5391 REMARK 3 CHIRALITY : 0.059 548 REMARK 3 PLANARITY : 0.005 696 REMARK 3 DIHEDRAL : 3.266 2234 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6DX1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1000235390. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 89730 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 6DWX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.3 M MAGNESIUM ACETATE, 16% PEG 3350, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.81933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 35.40967 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 35.40967 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 70.81933 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 0 REMARK 465 ALA B 1 REMARK 465 ASN B 157 REMARK 465 VAL B 158 REMARK 465 THR B 159 REMARK 465 GLN B 160 REMARK 465 GLU B 161 REMARK 465 PRO B 162 REMARK 465 PRO B 163 REMARK 465 LYS B 164 REMARK 465 SER B 165 REMARK 465 GLY B 166 REMARK 465 SER B 167 REMARK 465 HIS B 168 REMARK 465 HIS B 169 REMARK 465 HIS B 170 REMARK 465 HIS B 171 REMARK 465 HIS B 172 REMARK 465 HIS B 173 REMARK 465 MET A 0 REMARK 465 ALA A 1 REMARK 465 ASN A 2 REMARK 465 LEU A 3 REMARK 465 LYS A 4 REMARK 465 GLU A 5 REMARK 465 ASN A 157 REMARK 465 VAL A 158 REMARK 465 THR A 159 REMARK 465 GLN A 160 REMARK 465 GLU A 161 REMARK 465 PRO A 162 REMARK 465 PRO A 163 REMARK 465 LYS A 164 REMARK 465 SER A 165 REMARK 465 GLY A 166 REMARK 465 SER A 167 REMARK 465 HIS A 168 REMARK 465 HIS A 169 REMARK 465 HIS A 170 REMARK 465 HIS A 171 REMARK 465 HIS A 172 REMARK 465 HIS A 173 REMARK 465 MET C 0 REMARK 465 ALA C 1 REMARK 465 ASN C 2 REMARK 465 LEU C 3 REMARK 465 LYS C 4 REMARK 465 GLU C 5 REMARK 465 ASN C 157 REMARK 465 VAL C 158 REMARK 465 THR C 159 REMARK 465 GLN C 160 REMARK 465 GLU C 161 REMARK 465 PRO C 162 REMARK 465 PRO C 163 REMARK 465 LYS C 164 REMARK 465 SER C 165 REMARK 465 GLY C 166 REMARK 465 SER C 167 REMARK 465 HIS C 168 REMARK 465 HIS C 169 REMARK 465 HIS C 170 REMARK 465 HIS C 171 REMARK 465 HIS C 172 REMARK 465 HIS C 173 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 346 O HOH A 353 1.80 REMARK 500 O HOH A 340 O HOH A 372 1.82 REMARK 500 O HOH B 337 O HOH B 354 1.82 REMARK 500 O HOH C 342 O HOH C 350 1.82 REMARK 500 O HOH B 317 O HOH B 342 1.82 REMARK 500 O HOH C 332 O HOH C 342 1.95 REMARK 500 OE1 GLN C 146 O HOH C 201 1.97 REMARK 500 O HOH B 362 O HOH B 363 2.00 REMARK 500 OE2 GLU A 94 O HOH A 201 2.00 REMARK 500 O HOH A 289 O HOH A 323 2.07 REMARK 500 O HOH B 332 O HOH B 357 2.09 REMARK 500 O HOH A 330 O HOH A 343 2.11 REMARK 500 O HOH A 280 O HOH A 333 2.11 REMARK 500 OE2 GLU B 65 O HOH B 201 2.13 REMARK 500 O HOH B 341 O HOH B 358 2.13 REMARK 500 OE2 GLU C 73 O HOH C 202 2.14 REMARK 500 O HOH C 265 O HOH C 296 2.14 REMARK 500 OD2 ASP C 148 O HOH C 203 2.16 REMARK 500 OE1 GLU C 90 O HOH C 204 2.16 REMARK 500 N ASN B 2 O HOH B 202 2.18 REMARK 500 O HOH C 223 O HOH C 297 2.18 REMARK 500 O HOH B 298 O HOH B 318 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 213 O HOH A 314 4565 1.98 REMARK 500 O HOH A 358 O HOH A 371 3445 2.10 REMARK 500 O HOH B 325 O HOH C 341 5554 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE B 13 127.64 -171.33 REMARK 500 ASP B 14 -120.63 49.56 REMARK 500 VAL B 123 -53.56 -136.29 REMARK 500 PHE A 13 123.53 -170.09 REMARK 500 ASP A 14 -116.91 53.19 REMARK 500 VAL A 123 -59.47 -131.62 REMARK 500 PHE C 13 128.98 -173.26 REMARK 500 ASP C 14 -123.52 54.34 REMARK 500 VAL C 123 -58.94 -131.75 REMARK 500 ILE C 145 -167.40 -116.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C 351 DISTANCE = 6.51 ANGSTROMS DBREF1 6DX1 B 0 164 UNP A0A191KWB3_9VIRU DBREF2 6DX1 B A0A191KWB3 1 165 DBREF1 6DX1 A 0 164 UNP A0A191KWB3_9VIRU DBREF2 6DX1 A A0A191KWB3 1 165 DBREF1 6DX1 C 0 164 UNP A0A191KWB3_9VIRU DBREF2 6DX1 C A0A191KWB3 1 165 SEQADV 6DX1 SER B 165 UNP A0A191KWB EXPRESSION TAG SEQADV 6DX1 GLY B 166 UNP A0A191KWB EXPRESSION TAG SEQADV 6DX1 SER B 167 UNP A0A191KWB EXPRESSION TAG SEQADV 6DX1 HIS B 168 UNP A0A191KWB EXPRESSION TAG SEQADV 6DX1 HIS B 169 UNP A0A191KWB EXPRESSION TAG SEQADV 6DX1 HIS B 170 UNP A0A191KWB EXPRESSION TAG SEQADV 6DX1 HIS B 171 UNP A0A191KWB EXPRESSION TAG SEQADV 6DX1 HIS B 172 UNP A0A191KWB EXPRESSION TAG SEQADV 6DX1 HIS B 173 UNP A0A191KWB EXPRESSION TAG SEQADV 6DX1 SER A 165 UNP A0A191KWB EXPRESSION TAG SEQADV 6DX1 GLY A 166 UNP A0A191KWB EXPRESSION TAG SEQADV 6DX1 SER A 167 UNP A0A191KWB EXPRESSION TAG SEQADV 6DX1 HIS A 168 UNP A0A191KWB EXPRESSION TAG SEQADV 6DX1 HIS A 169 UNP A0A191KWB EXPRESSION TAG SEQADV 6DX1 HIS A 170 UNP A0A191KWB EXPRESSION TAG SEQADV 6DX1 HIS A 171 UNP A0A191KWB EXPRESSION TAG SEQADV 6DX1 HIS A 172 UNP A0A191KWB EXPRESSION TAG SEQADV 6DX1 HIS A 173 UNP A0A191KWB EXPRESSION TAG SEQADV 6DX1 SER C 165 UNP A0A191KWB EXPRESSION TAG SEQADV 6DX1 GLY C 166 UNP A0A191KWB EXPRESSION TAG SEQADV 6DX1 SER C 167 UNP A0A191KWB EXPRESSION TAG SEQADV 6DX1 HIS C 168 UNP A0A191KWB EXPRESSION TAG SEQADV 6DX1 HIS C 169 UNP A0A191KWB EXPRESSION TAG SEQADV 6DX1 HIS C 170 UNP A0A191KWB EXPRESSION TAG SEQADV 6DX1 HIS C 171 UNP A0A191KWB EXPRESSION TAG SEQADV 6DX1 HIS C 172 UNP A0A191KWB EXPRESSION TAG SEQADV 6DX1 HIS C 173 UNP A0A191KWB EXPRESSION TAG SEQRES 1 B 174 MET ALA ASN LEU LYS GLU ASN ILE VAL TRP GLU HIS VAL SEQRES 2 B 174 PHE ASP ASN CYS SER GLN ALA ASN VAL VAL PHE SER TYR SEQRES 3 B 174 ARG GLU PHE PHE ASN LYS GLU LEU THR LEU PRO ASP GLY SEQRES 4 B 174 ASN CYS PHE PHE ARG ALA VAL SER THR PHE LEU TYR ASP SEQRES 5 B 174 THR GLN ASN GLY TRP ILE GLU VAL LYS ASN MET CYS ARG SEQRES 6 B 174 GLU PHE ALA GLU THR ASN TRP ASP GLU LEU PRO GLY VAL SEQRES 7 B 174 HIS GLN TYR PHE GLN ASP PRO GLU HIS TYR ALA ARG GLU SEQRES 8 B 174 SER LYS ARG GLU GLY TYR TRP GLY GLY SER VAL GLU ALA SEQRES 9 B 174 GLU ILE LEU SER LYS LEU LEU LYS LEU THR VAL ILE PHE SEQRES 10 B 174 TRP LYS CYS GLU ASP ASP VAL TRP VAL THR GLN GLY ILE SEQRES 11 B 174 ARG TRP GLY ASP GLY ASN TYR LEU THR ALA ILE ASN LEU SEQRES 12 B 174 LEU HIS ILE GLN PHE ASP HIS PHE ASP PHE LEU VAL PRO SEQRES 13 B 174 ILE ASN VAL THR GLN GLU PRO PRO LYS SER GLY SER HIS SEQRES 14 B 174 HIS HIS HIS HIS HIS SEQRES 1 A 174 MET ALA ASN LEU LYS GLU ASN ILE VAL TRP GLU HIS VAL SEQRES 2 A 174 PHE ASP ASN CYS SER GLN ALA ASN VAL VAL PHE SER TYR SEQRES 3 A 174 ARG GLU PHE PHE ASN LYS GLU LEU THR LEU PRO ASP GLY SEQRES 4 A 174 ASN CYS PHE PHE ARG ALA VAL SER THR PHE LEU TYR ASP SEQRES 5 A 174 THR GLN ASN GLY TRP ILE GLU VAL LYS ASN MET CYS ARG SEQRES 6 A 174 GLU PHE ALA GLU THR ASN TRP ASP GLU LEU PRO GLY VAL SEQRES 7 A 174 HIS GLN TYR PHE GLN ASP PRO GLU HIS TYR ALA ARG GLU SEQRES 8 A 174 SER LYS ARG GLU GLY TYR TRP GLY GLY SER VAL GLU ALA SEQRES 9 A 174 GLU ILE LEU SER LYS LEU LEU LYS LEU THR VAL ILE PHE SEQRES 10 A 174 TRP LYS CYS GLU ASP ASP VAL TRP VAL THR GLN GLY ILE SEQRES 11 A 174 ARG TRP GLY ASP GLY ASN TYR LEU THR ALA ILE ASN LEU SEQRES 12 A 174 LEU HIS ILE GLN PHE ASP HIS PHE ASP PHE LEU VAL PRO SEQRES 13 A 174 ILE ASN VAL THR GLN GLU PRO PRO LYS SER GLY SER HIS SEQRES 14 A 174 HIS HIS HIS HIS HIS SEQRES 1 C 174 MET ALA ASN LEU LYS GLU ASN ILE VAL TRP GLU HIS VAL SEQRES 2 C 174 PHE ASP ASN CYS SER GLN ALA ASN VAL VAL PHE SER TYR SEQRES 3 C 174 ARG GLU PHE PHE ASN LYS GLU LEU THR LEU PRO ASP GLY SEQRES 4 C 174 ASN CYS PHE PHE ARG ALA VAL SER THR PHE LEU TYR ASP SEQRES 5 C 174 THR GLN ASN GLY TRP ILE GLU VAL LYS ASN MET CYS ARG SEQRES 6 C 174 GLU PHE ALA GLU THR ASN TRP ASP GLU LEU PRO GLY VAL SEQRES 7 C 174 HIS GLN TYR PHE GLN ASP PRO GLU HIS TYR ALA ARG GLU SEQRES 8 C 174 SER LYS ARG GLU GLY TYR TRP GLY GLY SER VAL GLU ALA SEQRES 9 C 174 GLU ILE LEU SER LYS LEU LEU LYS LEU THR VAL ILE PHE SEQRES 10 C 174 TRP LYS CYS GLU ASP ASP VAL TRP VAL THR GLN GLY ILE SEQRES 11 C 174 ARG TRP GLY ASP GLY ASN TYR LEU THR ALA ILE ASN LEU SEQRES 12 C 174 LEU HIS ILE GLN PHE ASP HIS PHE ASP PHE LEU VAL PRO SEQRES 13 C 174 ILE ASN VAL THR GLN GLU PRO PRO LYS SER GLY SER HIS SEQRES 14 C 174 HIS HIS HIS HIS HIS FORMUL 4 HOH *498(H2 O) HELIX 1 AA1 ASN B 39 ASP B 51 1 13 HELIX 2 AA2 THR B 52 ASN B 54 5 3 HELIX 3 AA3 GLY B 55 ASN B 70 1 16 HELIX 4 AA4 TRP B 71 GLU B 73 5 3 HELIX 5 AA5 LEU B 74 GLN B 79 1 6 HELIX 6 AA6 ASP B 83 LYS B 92 1 10 HELIX 7 AA7 GLY B 99 LYS B 111 1 13 HELIX 8 AA8 ASN B 135 LEU B 137 5 3 HELIX 9 AA9 GLN B 146 ASP B 148 5 3 HELIX 10 AB1 TYR A 25 PHE A 28 1 4 HELIX 11 AB2 ASN A 39 ASP A 51 1 13 HELIX 12 AB3 THR A 52 ASN A 54 5 3 HELIX 13 AB4 GLY A 55 ASN A 70 1 16 HELIX 14 AB5 TRP A 71 GLU A 73 5 3 HELIX 15 AB6 LEU A 74 GLN A 79 1 6 HELIX 16 AB7 ASP A 83 LYS A 92 1 10 HELIX 17 AB8 GLY A 99 LYS A 111 1 13 HELIX 18 AB9 ASN A 135 ALA A 139 5 5 HELIX 19 AC1 GLN A 146 ASP A 148 5 3 HELIX 20 AC2 ASN C 39 ASP C 51 1 13 HELIX 21 AC3 THR C 52 ASN C 54 5 3 HELIX 22 AC4 GLY C 55 ASN C 70 1 16 HELIX 23 AC5 TRP C 71 GLU C 73 5 3 HELIX 24 AC6 LEU C 74 GLN C 79 1 6 HELIX 25 AC7 ASP C 83 ARG C 93 1 11 HELIX 26 AC8 GLY C 99 LYS C 111 1 13 HELIX 27 AC9 ASN C 135 ALA C 139 5 5 HELIX 28 AD1 GLN C 146 ASP C 148 5 3 SHEET 1 AA1 7 GLU B 10 PHE B 13 0 SHEET 2 AA1 7 CYS B 16 SER B 24 -1 O GLN B 18 N GLU B 10 SHEET 3 AA1 7 TRP B 124 TRP B 131 -1 O ARG B 130 N SER B 17 SHEET 4 AA1 7 THR B 113 CYS B 119 -1 N PHE B 116 O ILE B 129 SHEET 5 AA1 7 ALA B 139 ILE B 145 1 O LEU B 142 N TRP B 117 SHEET 6 AA1 7 HIS B 149 PRO B 155 -1 O ASP B 151 N LEU B 143 SHEET 7 AA1 7 PHE B 29 GLU B 32 -1 N ASN B 30 O VAL B 154 SHEET 1 AA2 7 GLU A 10 PHE A 13 0 SHEET 2 AA2 7 CYS A 16 SER A 24 -1 O GLN A 18 N GLU A 10 SHEET 3 AA2 7 TRP A 124 TRP A 131 -1 O VAL A 125 N PHE A 23 SHEET 4 AA2 7 VAL A 114 CYS A 119 -1 N VAL A 114 O TRP A 131 SHEET 5 AA2 7 ILE A 140 ILE A 145 1 O LEU A 142 N TRP A 117 SHEET 6 AA2 7 HIS A 149 PRO A 155 -1 O HIS A 149 N ILE A 145 SHEET 7 AA2 7 PHE A 29 GLU A 32 -1 N ASN A 30 O VAL A 154 SHEET 1 AA3 7 GLU C 10 PHE C 13 0 SHEET 2 AA3 7 CYS C 16 SER C 24 -1 O GLN C 18 N GLU C 10 SHEET 3 AA3 7 TRP C 124 TRP C 131 -1 O VAL C 125 N PHE C 23 SHEET 4 AA3 7 VAL C 114 CYS C 119 -1 N PHE C 116 O ILE C 129 SHEET 5 AA3 7 ILE C 140 HIS C 144 1 O LEU C 142 N TRP C 117 SHEET 6 AA3 7 PHE C 150 PRO C 155 -1 O ASP C 151 N LEU C 143 SHEET 7 AA3 7 PHE C 29 GLU C 32 -1 N GLU C 32 O PHE C 152 CRYST1 110.471 110.471 106.229 90.00 90.00 120.00 P 32 2 1 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009052 0.005226 0.000000 0.00000 SCALE2 0.000000 0.010453 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009414 0.00000