HEADER TRANSFERASE 28-JUN-18 6DXC TITLE CRYSTAL STRUCTURE OF CHALCONE SYNTHASE FROM SELAGINELLA MOELLENDORFFII TITLE 2 - S340C MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHALCONE SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SELAGINELLA MOELLENDORFFII; SOURCE 3 ORGANISM_COMMON: SPIKEMOSS; SOURCE 4 ORGANISM_TAXID: 88036; SOURCE 5 GENE: SELMODRAFT_271225; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PHIS8-3 KEYWDS THIOLASE, FLAVONOID, POLYKETIDE SYNTHASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR G.LIOU,Y.C.CHIANG,Y.WANG,J.K.WENG REVDAT 3 27-NOV-19 6DXC 1 REMARK REVDAT 2 19-DEC-18 6DXC 1 JRNL REVDAT 1 17-OCT-18 6DXC 0 JRNL AUTH G.LIOU,Y.C.CHIANG,Y.WANG,J.K.WENG JRNL TITL MECHANISTIC BASIS FOR THE EVOLUTION OF CHALCONE SYNTHASE JRNL TITL 2 CATALYTIC CYSTEINE REACTIVITY IN LAND PLANTS. JRNL REF J. BIOL. CHEM. V. 293 18601 2018 JRNL REFN ESSN 1083-351X JRNL PMID 30291143 JRNL DOI 10.1074/JBC.RA118.005695 REMARK 2 REMARK 2 RESOLUTION. 1.54 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.54 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.59 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 3 NUMBER OF REFLECTIONS : 105175 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.143 REMARK 3 R VALUE (WORKING SET) : 0.143 REMARK 3 FREE R VALUE : 0.173 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.810 REMARK 3 FREE R VALUE TEST SET COUNT : 1905 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.5957 - 3.7098 1.00 7860 144 0.1415 0.1693 REMARK 3 2 3.7098 - 2.9452 0.99 7735 144 0.1364 0.1427 REMARK 3 3 2.9452 - 2.5731 1.00 7711 142 0.1363 0.1807 REMARK 3 4 2.5731 - 2.3379 0.99 7655 146 0.1258 0.1656 REMARK 3 5 2.3379 - 2.1704 0.99 7667 143 0.1311 0.1486 REMARK 3 6 2.1704 - 2.0425 0.99 7590 136 0.1366 0.1598 REMARK 3 7 2.0425 - 1.9402 0.99 7613 144 0.1368 0.1775 REMARK 3 8 1.9402 - 1.8558 0.98 7579 133 0.1600 0.2009 REMARK 3 9 1.8558 - 1.7843 0.97 7452 136 0.1508 0.1974 REMARK 3 10 1.7843 - 1.7228 0.93 7140 126 0.1544 0.1905 REMARK 3 11 1.7228 - 1.6689 0.93 7193 136 0.1575 0.2026 REMARK 3 12 1.6689 - 1.6212 0.94 7198 135 0.1595 0.2032 REMARK 3 13 1.6212 - 1.5785 0.88 6754 121 0.1713 0.1899 REMARK 3 14 1.5785 - 1.5400 0.79 6123 119 0.1949 0.2544 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 10.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 9 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.1689 23.7149 35.5841 REMARK 3 T TENSOR REMARK 3 T11: 0.0668 T22: 0.0641 REMARK 3 T33: 0.0841 T12: -0.0134 REMARK 3 T13: -0.0013 T23: -0.0047 REMARK 3 L TENSOR REMARK 3 L11: 0.3755 L22: 0.3339 REMARK 3 L33: 0.7758 L12: -0.1683 REMARK 3 L13: 0.1514 L23: -0.0320 REMARK 3 S TENSOR REMARK 3 S11: -0.0258 S12: -0.0394 S13: 0.0317 REMARK 3 S21: 0.0822 S22: 0.0062 S23: -0.0324 REMARK 3 S31: -0.0488 S32: 0.0150 S33: 0.0301 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 150 THROUGH 264 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.4247 16.1230 29.4430 REMARK 3 T TENSOR REMARK 3 T11: 0.0614 T22: 0.0739 REMARK 3 T33: 0.0731 T12: 0.0057 REMARK 3 T13: -0.0020 T23: 0.0022 REMARK 3 L TENSOR REMARK 3 L11: 0.4049 L22: 0.3677 REMARK 3 L33: 0.3871 L12: 0.0816 REMARK 3 L13: 0.1075 L23: 0.0270 REMARK 3 S TENSOR REMARK 3 S11: -0.0078 S12: -0.0050 S13: -0.0413 REMARK 3 S21: 0.0625 S22: 0.0006 S23: -0.0091 REMARK 3 S31: 0.0403 S32: -0.0392 S33: 0.0109 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 265 THROUGH 386 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.6972 1.7449 26.6728 REMARK 3 T TENSOR REMARK 3 T11: 0.0914 T22: 0.0657 REMARK 3 T33: 0.1065 T12: 0.0058 REMARK 3 T13: -0.0032 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 0.9520 L22: 0.6868 REMARK 3 L33: 0.9101 L12: -0.0074 REMARK 3 L13: -0.0364 L23: -0.0373 REMARK 3 S TENSOR REMARK 3 S11: 0.0023 S12: 0.0351 S13: -0.1697 REMARK 3 S21: -0.0070 S22: 0.0010 S23: -0.0348 REMARK 3 S31: 0.1528 S32: -0.0070 S33: -0.0117 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 9 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.2809 30.2249 29.7328 REMARK 3 T TENSOR REMARK 3 T11: 0.0610 T22: 0.0602 REMARK 3 T33: 0.0719 T12: -0.0002 REMARK 3 T13: 0.0108 T23: -0.0147 REMARK 3 L TENSOR REMARK 3 L11: 0.5091 L22: 0.5783 REMARK 3 L33: 0.4399 L12: -0.0931 REMARK 3 L13: 0.0815 L23: 0.0956 REMARK 3 S TENSOR REMARK 3 S11: -0.0105 S12: -0.0852 S13: 0.0737 REMARK 3 S21: 0.0927 S22: 0.0128 S23: 0.0055 REMARK 3 S31: -0.0642 S32: -0.0281 S33: 0.0082 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 221 THROUGH 264 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.8523 32.2603 18.7055 REMARK 3 T TENSOR REMARK 3 T11: 0.0740 T22: 0.0605 REMARK 3 T33: 0.0947 T12: 0.0174 REMARK 3 T13: 0.0041 T23: -0.0135 REMARK 3 L TENSOR REMARK 3 L11: 0.3009 L22: 0.1433 REMARK 3 L33: 0.6405 L12: -0.0282 REMARK 3 L13: 0.0209 L23: -0.2000 REMARK 3 S TENSOR REMARK 3 S11: -0.0415 S12: 0.0163 S13: 0.0493 REMARK 3 S21: 0.0155 S22: 0.0284 S23: -0.0245 REMARK 3 S31: -0.1346 S32: 0.0333 S33: 0.0516 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 265 THROUGH 386 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.2977 36.4629 9.1162 REMARK 3 T TENSOR REMARK 3 T11: 0.0699 T22: 0.0685 REMARK 3 T33: 0.0799 T12: 0.0072 REMARK 3 T13: -0.0015 T23: 0.0132 REMARK 3 L TENSOR REMARK 3 L11: 0.8668 L22: 0.8268 REMARK 3 L33: 0.8964 L12: 0.1503 REMARK 3 L13: 0.1325 L23: 0.0867 REMARK 3 S TENSOR REMARK 3 S11: -0.0218 S12: 0.0700 S13: 0.0677 REMARK 3 S21: -0.0415 S22: 0.0302 S23: -0.0014 REMARK 3 S31: -0.0917 S32: -0.0072 S33: 0.0196 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6DXC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1000235357. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL, SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 105252 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.540 REMARK 200 RESOLUTION RANGE LOW (A) : 31.589 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 200 DATA REDUNDANCY : 1.800 REMARK 200 R MERGE (I) : 0.04892 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.6600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.54 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.5 REMARK 200 DATA REDUNDANCY IN SHELL : 1.50 REMARK 200 R MERGE FOR SHELL (I) : 0.16420 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.060 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MOPSO (PH 6.6), 0.3 M MG(NO3)2, REMARK 280 19% (V/V) PEG 4000, AND 5 MM DTT, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 33.19000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ILE A 3 REMARK 465 GLN A 4 REMARK 465 ASP A 5 REMARK 465 PHE A 6 REMARK 465 GLN A 7 REMARK 465 SER A 8 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 ILE B 3 REMARK 465 GLN B 4 REMARK 465 ASP B 5 REMARK 465 PHE B 6 REMARK 465 GLN B 7 REMARK 465 SER B 8 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE ARG A 57 O HOH A 407 1.45 REMARK 500 HD22 ASN A 222 O HOH A 405 1.47 REMARK 500 HZ3 LYS A 228 O HOH A 402 1.54 REMARK 500 HG1 THR A 189 O HOH A 409 1.54 REMARK 500 O HOH B 567 O HOH B 747 1.72 REMARK 500 O HOH A 621 O HOH A 695 1.88 REMARK 500 O HOH A 687 O HOH A 713 1.89 REMARK 500 O HOH B 789 O HOH B 837 1.90 REMARK 500 O HOH A 409 O HOH A 547 1.91 REMARK 500 O HOH B 402 O HOH B 459 1.91 REMARK 500 O HOH A 664 O HOH A 719 1.93 REMARK 500 O HOH B 559 O HOH B 779 1.95 REMARK 500 O HOH A 778 O HOH A 820 1.97 REMARK 500 O HOH B 626 O HOH B 751 1.98 REMARK 500 O HOH A 628 O HOH A 702 1.98 REMARK 500 O HOH A 705 O HOH A 739 2.03 REMARK 500 OD1 ASP B 27 O HOH B 401 2.03 REMARK 500 OD2 ASP B 328 O HOH B 402 2.03 REMARK 500 O HOH B 655 O HOH B 730 2.05 REMARK 500 O HOH A 415 O HOH A 479 2.05 REMARK 500 O HOH A 588 O HOH A 728 2.06 REMARK 500 O HOH B 404 O HOH B 678 2.06 REMARK 500 OD2 CSD B 159 O HOH B 403 2.06 REMARK 500 OD2 CSD A 159 O HOH A 401 2.07 REMARK 500 O HOH A 425 O HOH A 737 2.08 REMARK 500 O HOH B 513 O HOH B 792 2.09 REMARK 500 O HOH A 458 O HOH A 718 2.11 REMARK 500 NZ LYS A 228 O HOH A 402 2.11 REMARK 500 O HOH B 679 O HOH B 759 2.14 REMARK 500 OE2 GLU A 103 O HOH A 403 2.15 REMARK 500 O HOH B 655 O HOH B 745 2.16 REMARK 500 O HOH A 405 O HOH A 550 2.16 REMARK 500 OE1 GLU B 254 O HOH B 404 2.16 REMARK 500 O HOH B 423 O HOH B 706 2.16 REMARK 500 OD1 ASP A 27 O HOH A 404 2.17 REMARK 500 O HOH B 459 O HOH B 717 2.17 REMARK 500 O HOH A 782 O HOH A 789 2.18 REMARK 500 O HOH B 420 O HOH B 521 2.18 REMARK 500 ND2 ASN A 222 O HOH A 405 2.18 REMARK 500 O HOH B 651 O HOH B 822 2.18 REMARK 500 O HOH B 407 O HOH B 597 2.19 REMARK 500 N SER B 9 O HOH B 405 2.19 REMARK 500 O HOH B 673 O HOH B 800 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 733 O HOH A 786 2646 1.78 REMARK 500 O HOH A 776 O HOH B 776 1655 2.03 REMARK 500 O HOH A 748 O HOH B 803 1655 2.06 REMARK 500 O HOH A 772 O HOH B 768 1655 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 239 CA - CB - SG ANGL. DEV. = 7.0 DEGREES REMARK 500 CYS B 239 CA - CB - SG ANGL. DEV. = 9.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 85 2.07 -161.28 REMARK 500 HIS A 200 58.74 -141.80 REMARK 500 MET A 336 30.54 -93.56 REMARK 500 SER A 337 -130.38 54.27 REMARK 500 SER B 85 5.70 -162.22 REMARK 500 MET B 336 30.73 -94.73 REMARK 500 SER B 337 -126.74 52.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 831 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH B 850 DISTANCE = 5.82 ANGSTROMS DBREF 6DXC A 1 386 UNP D8S128 D8S128_SELML 1 386 DBREF 6DXC B 1 386 UNP D8S128 D8S128_SELML 1 386 SEQADV 6DXC CYS A 340 UNP D8S128 SER 340 ENGINEERED MUTATION SEQADV 6DXC THR A 380 UNP D8S128 ALA 380 CONFLICT SEQADV 6DXC CYS B 340 UNP D8S128 SER 340 ENGINEERED MUTATION SEQADV 6DXC THR B 380 UNP D8S128 ALA 380 CONFLICT SEQRES 1 A 386 MET THR ILE GLN ASP PHE GLN SER SER GLY LYS ALA THR SEQRES 2 A 386 VAL LEU ALA VAL GLY THR ALA VAL PRO PRO LYS GLU PHE SEQRES 3 A 386 ASP GLN SER THR TYR PRO ASP PHE TYR PHE ASN VAL THR SEQRES 4 A 386 ASN CYS ASN ASP LYS VAL GLU LEU LYS GLY LYS PHE GLN SEQRES 5 A 386 ARG ILE CYS ASP ARG SER GLY ILE LYS LYS ARG HIS PHE SEQRES 6 A 386 TYR LEU ASP GLU GLU ILE LEU LYS ALA ASN PRO GLY MET SEQRES 7 A 386 CYS THR TYR MET GLY ALA SER LEU ASP VAL ARG GLN ASN SEQRES 8 A 386 ILE ALA VAL ARG GLU VAL PRO LYS LEU ALA LYS GLU ALA SEQRES 9 A 386 ALA LEU LYS ALA ILE LYS GLU TRP GLY GLN PRO LYS SER SEQRES 10 A 386 LYS ILE THR HIS LEU VAL PHE GLY THR THR SER GLY VAL SEQRES 11 A 386 ASP MET PRO GLY ALA ASP PHE GLN LEU LEU LYS LEU LEU SEQRES 12 A 386 GLY LEU ARG PRO ASN VAL LYS ARG ILE MET LEU TYR GLN SEQRES 13 A 386 GLN GLY CSD SER ALA GLY ALA THR VAL THR ARG VAL ALA SEQRES 14 A 386 LYS ASP LEU ALA GLU ASN ASN PRO GLY ALA ARG VAL LEU SEQRES 15 A 386 VAL ALA CYS SER GLU VAL THR ALA VAL THR PHE ARG ALA SEQRES 16 A 386 PRO SER GLU THR HIS LEU ASP GLY LEU VAL GLY ALA ALA SEQRES 17 A 386 LEU PHE GLY ASP GLY ALA ALA ALA LEU ILE ILE GLY SER SEQRES 18 A 386 ASN PRO THR PRO VAL GLU LYS PRO LEU PHE GLU VAL HIS SEQRES 19 A 386 TRP SER GLY GLN CYS VAL LEU PRO ASP SER ASP GLY ALA SEQRES 20 A 386 ILE LEU GLY HIS LEU ARG GLU ALA GLY LEU VAL PHE HIS SEQRES 21 A 386 LEU LEU LYS ASP VAL PRO GLY ILE ILE SER LYS ASN ILE SEQRES 22 A 386 GLU LYS LEU LEU ALA GLU PRO LEU ASP TYR VAL LYS SER SEQRES 23 A 386 VAL ASP GLU ALA SER PRO ALA TYR THR ASP LEU PHE TRP SEQRES 24 A 386 VAL VAL HIS PRO GLY GLY PRO ALA ILE LEU ASP GLN VAL SEQRES 25 A 386 GLU ALA LYS LEU LYS LEU ASP LYS ASP ARG MET GLN ALA SEQRES 26 A 386 THR ARG ASP VAL LEU ALA GLN TYR GLY ASN MET SER SER SEQRES 27 A 386 ALA CYS VAL LEU PHE VAL LEU ASP GLN MET ARG LYS ARG SEQRES 28 A 386 SER VAL GLU LEU ASN LYS ASP THR THR GLY ASP GLY LEU SEQRES 29 A 386 LYS TRP GLY VAL MET LEU GLY PHE GLY PRO GLY LEU THR SEQRES 30 A 386 VAL GLU THR LEU LEU LEU LYS SER ILE SEQRES 1 B 386 MET THR ILE GLN ASP PHE GLN SER SER GLY LYS ALA THR SEQRES 2 B 386 VAL LEU ALA VAL GLY THR ALA VAL PRO PRO LYS GLU PHE SEQRES 3 B 386 ASP GLN SER THR TYR PRO ASP PHE TYR PHE ASN VAL THR SEQRES 4 B 386 ASN CYS ASN ASP LYS VAL GLU LEU LYS GLY LYS PHE GLN SEQRES 5 B 386 ARG ILE CYS ASP ARG SER GLY ILE LYS LYS ARG HIS PHE SEQRES 6 B 386 TYR LEU ASP GLU GLU ILE LEU LYS ALA ASN PRO GLY MET SEQRES 7 B 386 CYS THR TYR MET GLY ALA SER LEU ASP VAL ARG GLN ASN SEQRES 8 B 386 ILE ALA VAL ARG GLU VAL PRO LYS LEU ALA LYS GLU ALA SEQRES 9 B 386 ALA LEU LYS ALA ILE LYS GLU TRP GLY GLN PRO LYS SER SEQRES 10 B 386 LYS ILE THR HIS LEU VAL PHE GLY THR THR SER GLY VAL SEQRES 11 B 386 ASP MET PRO GLY ALA ASP PHE GLN LEU LEU LYS LEU LEU SEQRES 12 B 386 GLY LEU ARG PRO ASN VAL LYS ARG ILE MET LEU TYR GLN SEQRES 13 B 386 GLN GLY CSD SER ALA GLY ALA THR VAL THR ARG VAL ALA SEQRES 14 B 386 LYS ASP LEU ALA GLU ASN ASN PRO GLY ALA ARG VAL LEU SEQRES 15 B 386 VAL ALA CYS SER GLU VAL THR ALA VAL THR PHE ARG ALA SEQRES 16 B 386 PRO SER GLU THR HIS LEU ASP GLY LEU VAL GLY ALA ALA SEQRES 17 B 386 LEU PHE GLY ASP GLY ALA ALA ALA LEU ILE ILE GLY SER SEQRES 18 B 386 ASN PRO THR PRO VAL GLU LYS PRO LEU PHE GLU VAL HIS SEQRES 19 B 386 TRP SER GLY GLN CYS VAL LEU PRO ASP SER ASP GLY ALA SEQRES 20 B 386 ILE LEU GLY HIS LEU ARG GLU ALA GLY LEU VAL PHE HIS SEQRES 21 B 386 LEU LEU LYS ASP VAL PRO GLY ILE ILE SER LYS ASN ILE SEQRES 22 B 386 GLU LYS LEU LEU ALA GLU PRO LEU ASP TYR VAL LYS SER SEQRES 23 B 386 VAL ASP GLU ALA SER PRO ALA TYR THR ASP LEU PHE TRP SEQRES 24 B 386 VAL VAL HIS PRO GLY GLY PRO ALA ILE LEU ASP GLN VAL SEQRES 25 B 386 GLU ALA LYS LEU LYS LEU ASP LYS ASP ARG MET GLN ALA SEQRES 26 B 386 THR ARG ASP VAL LEU ALA GLN TYR GLY ASN MET SER SER SEQRES 27 B 386 ALA CYS VAL LEU PHE VAL LEU ASP GLN MET ARG LYS ARG SEQRES 28 B 386 SER VAL GLU LEU ASN LYS ASP THR THR GLY ASP GLY LEU SEQRES 29 B 386 LYS TRP GLY VAL MET LEU GLY PHE GLY PRO GLY LEU THR SEQRES 30 B 386 VAL GLU THR LEU LEU LEU LYS SER ILE MODRES 6DXC CSD A 159 CYS MODIFIED RESIDUE MODRES 6DXC CSD B 159 CYS MODIFIED RESIDUE HET CSD A 159 13 HET CSD B 159 13 HETNAM CSD 3-SULFINOALANINE HETSYN CSD S-CYSTEINESULFINIC ACID; S-SULFINOCYSTEINE FORMUL 1 CSD 2(C3 H7 N O4 S) FORMUL 3 HOH *881(H2 O) HELIX 1 AA1 THR A 30 THR A 39 1 10 HELIX 2 AA2 LYS A 44 ARG A 57 1 14 HELIX 3 AA3 ASP A 68 ASN A 75 1 8 HELIX 4 AA4 PRO A 76 THR A 80 5 5 HELIX 5 AA5 SER A 85 GLY A 113 1 29 HELIX 6 AA6 PRO A 115 ILE A 119 5 5 HELIX 7 AA7 GLY A 134 GLY A 144 1 11 HELIX 8 AA8 SER A 160 ASN A 176 1 17 HELIX 9 AA9 VAL A 188 THR A 192 5 5 HELIX 10 AB1 ASP A 202 PHE A 210 1 9 HELIX 11 AB2 ASP A 264 GLU A 289 1 26 HELIX 12 AB3 ALA A 293 LEU A 297 5 5 HELIX 13 AB4 GLY A 305 LYS A 317 1 13 HELIX 14 AB5 ASP A 319 ARG A 322 5 4 HELIX 15 AB6 MET A 323 GLY A 334 1 12 HELIX 16 AB7 MET A 336 SER A 338 5 3 HELIX 17 AB8 ALA A 339 LEU A 355 1 17 HELIX 18 AB9 THR B 30 THR B 39 1 10 HELIX 19 AC1 LYS B 44 ARG B 57 1 14 HELIX 20 AC2 ASP B 68 ASN B 75 1 8 HELIX 21 AC3 PRO B 76 THR B 80 5 5 HELIX 22 AC4 SER B 85 GLY B 113 1 29 HELIX 23 AC5 PRO B 115 ILE B 119 5 5 HELIX 24 AC6 GLY B 134 GLY B 144 1 11 HELIX 25 AC7 SER B 160 ASN B 176 1 17 HELIX 26 AC8 VAL B 188 THR B 192 5 5 HELIX 27 AC9 ASP B 202 PHE B 210 1 9 HELIX 28 AD1 ASP B 264 GLU B 289 1 26 HELIX 29 AD2 ALA B 293 LEU B 297 5 5 HELIX 30 AD3 GLY B 305 LYS B 317 1 13 HELIX 31 AD4 ASP B 319 ARG B 322 5 4 HELIX 32 AD5 MET B 323 GLY B 334 1 12 HELIX 33 AD6 MET B 336 SER B 338 5 3 HELIX 34 AD7 ALA B 339 LEU B 355 1 17 SHEET 1 AA1 9 LYS A 150 LEU A 154 0 SHEET 2 AA1 9 HIS A 121 GLY A 125 1 N PHE A 124 O LEU A 154 SHEET 3 AA1 9 ARG A 180 GLU A 187 1 O LEU A 182 N HIS A 121 SHEET 4 AA1 9 GLY A 213 GLY A 220 -1 O ILE A 219 N VAL A 181 SHEET 5 AA1 9 THR A 13 ALA A 20 -1 N LEU A 15 O ILE A 218 SHEET 6 AA1 9 PHE A 231 VAL A 240 -1 O PHE A 231 N VAL A 14 SHEET 7 AA1 9 THR A 377 SER A 385 -1 O LEU A 382 N HIS A 234 SHEET 8 AA1 9 TRP A 366 GLY A 373 -1 N GLY A 367 O LEU A 383 SHEET 9 AA1 9 PHE A 298 VAL A 301 1 N VAL A 300 O VAL A 368 SHEET 1 AA2 2 GLU A 25 ASP A 27 0 SHEET 2 AA2 2 LYS A 62 HIS A 64 -1 O ARG A 63 N PHE A 26 SHEET 1 AA3 3 ASP A 131 MET A 132 0 SHEET 2 AA3 3 ILE B 248 ARG B 253 -1 O GLY B 250 N MET A 132 SHEET 3 AA3 3 GLY B 256 LEU B 261 -1 O VAL B 258 N HIS B 251 SHEET 1 AA4 3 GLY A 256 LEU A 261 0 SHEET 2 AA4 3 ILE A 248 ARG A 253 -1 N HIS A 251 O VAL A 258 SHEET 3 AA4 3 ASP B 131 MET B 132 -1 O MET B 132 N GLY A 250 SHEET 1 AA5 9 LYS B 150 LEU B 154 0 SHEET 2 AA5 9 HIS B 121 GLY B 125 1 N PHE B 124 O LEU B 154 SHEET 3 AA5 9 ARG B 180 GLU B 187 1 O ALA B 184 N GLY B 125 SHEET 4 AA5 9 GLY B 213 GLY B 220 -1 O ILE B 219 N VAL B 181 SHEET 5 AA5 9 THR B 13 ALA B 20 -1 N LEU B 15 O ILE B 218 SHEET 6 AA5 9 PHE B 231 VAL B 240 -1 O PHE B 231 N VAL B 14 SHEET 7 AA5 9 THR B 377 SER B 385 -1 O LEU B 382 N HIS B 234 SHEET 8 AA5 9 TRP B 366 GLY B 373 -1 N GLY B 367 O LEU B 383 SHEET 9 AA5 9 PHE B 298 VAL B 301 1 N VAL B 300 O VAL B 368 SHEET 1 AA6 2 GLU B 25 ASP B 27 0 SHEET 2 AA6 2 LYS B 62 HIS B 64 -1 O ARG B 63 N PHE B 26 LINK C GLY A 158 N CSD A 159 1555 1555 1.31 LINK C CSD A 159 N SER A 160 1555 1555 1.32 LINK C GLY B 158 N CSD B 159 1555 1555 1.32 LINK C CSD B 159 N SER B 160 1555 1555 1.33 CISPEP 1 MET A 132 PRO A 133 0 -7.67 CISPEP 2 GLY A 375 LEU A 376 0 -0.74 CISPEP 3 MET B 132 PRO B 133 0 -7.56 CISPEP 4 GLY B 375 LEU B 376 0 -2.77 CRYST1 55.220 66.380 103.000 90.00 91.73 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018109 0.000000 0.000547 0.00000 SCALE2 0.000000 0.015065 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009713 0.00000