HEADER OXIDOREDUCTASE 29-JUN-18 6DXN TITLE 1.95 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF DSBA DISULFIDE TITLE 2 INTERCHANGE PROTEIN FROM KLEBSIELLA PNEUMONIAE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOL:DISULFIDE INTERCHANGE PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 573; SOURCE 4 GENE: BB785_17655, BKY56_010280, C3F39_04655; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) MAGIC; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG68 KEYWDS STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 2 DISEASES, CSGID, DSBA OXIDOREDUCTASE, OXIDOREDUCTASES., KEYWDS 3 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR G.MINASOV,Z.WAWRZAK,L.SHUVALOVA,O.KIRYUKHINA,M.ENDRES,K.J.F.SATCHELL, AUTHOR 2 A.JOACHIMIAK,CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES AUTHOR 3 (CSGID) REVDAT 4 15-NOV-23 6DXN 1 REMARK REVDAT 3 25-OCT-23 6DXN 1 REMARK REVDAT 2 14-JUN-23 6DXN 1 JRNL REVDAT 1 11-JUL-18 6DXN 0 JRNL AUTH N.L.INNISS,T.J.KOCHAN,G.MINASOV,Z.WAWRZAK,C.CHANG,K.TAN, JRNL AUTH 2 L.SHUVALOVA,O.KIRYUKHINA,S.PSHENYCHNYI,R.WU,I.DUBROVSKA, JRNL AUTH 3 G.BABNIGG,M.ENDRES,W.F.ANDERSON,A.R.HAUSER,A.JOACHIMIAK, JRNL AUTH 4 K.J.F.SATCHELL JRNL TITL A STRUCTURAL SYSTEMS BIOLOGY APPROACH TO HIGH-RISK CG23 JRNL TITL 2 KLEBSIELLA PNEUMONIAE. JRNL REF MICROBIOL RESOUR ANNOUNC V. 12 01322 2023 JRNL REFN ISSN 2576-098X JRNL PMID 36695589 JRNL DOI 10.1128/MRA.01013-22 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0230 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.01 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 3 NUMBER OF REFLECTIONS : 48932 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 2397 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.99 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2835 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 78.23 REMARK 3 BIN R VALUE (WORKING SET) : 0.1770 REMARK 3 BIN FREE R VALUE SET COUNT : 176 REMARK 3 BIN FREE R VALUE : 0.2390 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6032 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 365 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.36000 REMARK 3 B22 (A**2) : 3.66000 REMARK 3 B33 (A**2) : -3.30000 REMARK 3 B12 (A**2) : 12.88000 REMARK 3 B13 (A**2) : 0.65000 REMARK 3 B23 (A**2) : -13.90000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.041 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.036 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.093 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.991 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.911 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6323 ; 0.006 ; 0.014 REMARK 3 BOND LENGTHS OTHERS (A): 5815 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8556 ; 1.133 ; 1.683 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13621 ; 0.427 ; 1.706 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 785 ; 2.712 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 309 ;29.586 ;24.175 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1028 ; 9.702 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ; 8.881 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 799 ; 0.056 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7078 ; 0.038 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1186 ; 0.034 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3110 ; 1.671 ; 2.259 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3109 ; 1.670 ; 2.259 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3905 ; 2.599 ; 3.382 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3906 ; 2.598 ; 3.382 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3213 ; 1.625 ; 2.388 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3213 ; 1.624 ; 2.388 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4652 ; 2.387 ; 3.519 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 7313 ; 4.329 ;26.803 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 7264 ; 4.232 ;26.783 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 4 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.430 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : K, H, -L REMARK 3 TWIN FRACTION : 0.150 REMARK 3 TWIN DOMAIN : 3 REMARK 3 TWIN OPERATOR : -K, -H, -L REMARK 3 TWIN FRACTION : 0.128 REMARK 3 TWIN DOMAIN : 4 REMARK 3 TWIN OPERATOR : -H,-K,L REMARK 3 TWIN FRACTION : 0.292 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6DXN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1000235406. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-APR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : BE REMARK 200 OPTICS : C(111) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51946 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.13500 REMARK 200 R SYM (I) : 0.13500 REMARK 200 FOR THE DATA SET : 16.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.98 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.78600 REMARK 200 R SYM FOR SHELL (I) : 0.78600 REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MRBUMP REMARK 200 STARTING MODEL: 4OCF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN: 9.6MG/ML, 0.01M TRIS-HCL PH REMARK 280 8.3; SCREEN: PEGS II (B9), 0.1M TRIS-HCL PH 8.5, 30% (V/V) PEG REMARK 280 400., VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 31 REMARK 465 SER B 31 REMARK 465 SER C 31 REMARK 465 ASN C 32 REMARK 465 PRO C 221 REMARK 465 LEU C 222 REMARK 465 SER D 31 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 440 O HOH A 489 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 71 -31.00 -134.60 REMARK 500 ARG A 72 -63.05 -100.24 REMARK 500 ASP A 86 44.02 -93.08 REMARK 500 ASP A 86 42.65 -93.08 REMARK 500 MSE A 87 128.07 -172.61 REMARK 500 VAL A 130 -64.32 -105.29 REMARK 500 ARG A 132 51.07 34.57 REMARK 500 ASN A 160 135.53 -39.95 REMARK 500 VAL B 49 105.34 -59.36 REMARK 500 GLU B 71 -44.39 -142.25 REMARK 500 ASP B 86 44.06 -89.80 REMARK 500 ASP B 86 44.55 -90.98 REMARK 500 MSE B 87 136.40 -174.38 REMARK 500 MSE B 87 136.40 -173.59 REMARK 500 VAL B 130 -55.50 -121.49 REMARK 500 SER B 188 8.44 59.38 REMARK 500 ARG C 72 -65.04 -98.70 REMARK 500 LYS C 190 -30.58 -157.76 REMARK 500 ALA C 199 136.75 -37.98 REMARK 500 ASN C 219 49.65 -84.97 REMARK 500 HIS D 46 87.17 -164.44 REMARK 500 GLU D 71 -27.90 -142.47 REMARK 500 ARG D 72 -64.01 -102.45 REMARK 500 SER D 188 12.36 58.69 REMARK 500 LYS D 190 -7.48 -144.01 REMARK 500 ALA D 199 127.09 -35.70 REMARK 500 ASP D 201 -26.83 77.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE C 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP96881 RELATED DB: TARGETTRACK DBREF1 6DXN A 34 222 UNP A0A169B8J1_KLEPN DBREF2 6DXN A A0A169B8J1 26 214 DBREF1 6DXN B 34 222 UNP A0A169B8J1_KLEPN DBREF2 6DXN B A0A169B8J1 26 214 DBREF1 6DXN C 34 222 UNP A0A169B8J1_KLEPN DBREF2 6DXN C A0A169B8J1 26 214 DBREF1 6DXN D 34 222 UNP A0A169B8J1_KLEPN DBREF2 6DXN D A0A169B8J1 26 214 SEQADV 6DXN SER A 31 UNP A0A169B8J EXPRESSION TAG SEQADV 6DXN ASN A 32 UNP A0A169B8J EXPRESSION TAG SEQADV 6DXN ALA A 33 UNP A0A169B8J EXPRESSION TAG SEQADV 6DXN SER B 31 UNP A0A169B8J EXPRESSION TAG SEQADV 6DXN ASN B 32 UNP A0A169B8J EXPRESSION TAG SEQADV 6DXN ALA B 33 UNP A0A169B8J EXPRESSION TAG SEQADV 6DXN SER C 31 UNP A0A169B8J EXPRESSION TAG SEQADV 6DXN ASN C 32 UNP A0A169B8J EXPRESSION TAG SEQADV 6DXN ALA C 33 UNP A0A169B8J EXPRESSION TAG SEQADV 6DXN SER D 31 UNP A0A169B8J EXPRESSION TAG SEQADV 6DXN ASN D 32 UNP A0A169B8J EXPRESSION TAG SEQADV 6DXN ALA D 33 UNP A0A169B8J EXPRESSION TAG SEQRES 1 A 192 SER ASN ALA LYS ASP TYR GLN ALA GLY LYS ASN PHE THR SEQRES 2 A 192 VAL ILE HIS SER THR VAL LYS GLN PRO PRO PRO LEU VAL SEQRES 3 A 192 GLU PHE PHE SER PHE TYR CYS GLY PRO CYS TYR ALA PHE SEQRES 4 A 192 ALA GLU ARG ILE ASN VAL ASP THR ALA ILE ARG LYS ARG SEQRES 5 A 192 LEU PRO ASP ASP MSE LYS LEU GLU LYS TYR HIS VAL SER SEQRES 6 A 192 GLN MSE GLY PRO LEU GLY PRO ALA LEU THR GLU ALA TRP SEQRES 7 A 192 ALA VAL ALA GLN TYR ALA GLY VAL ASP GLY LYS VAL GLU SEQRES 8 A 192 LYS LEU LEU PHE GLU GLY LEU GLN VAL LYS ARG ASP ILE SEQRES 9 A 192 LYS THR ALA ALA ASP ILE VAL LYS VAL PHE ASN GLN LEU SEQRES 10 A 192 GLY ILE THR SER GLU LYS TYR ALA GLU MSE GLN SER ASN SEQRES 11 A 192 PHE MSE VAL LYS ALA LEU ILE ALA ARG GLN ASP ASN LEU SEQRES 12 A 192 VAL GLU LYS MSE LYS VAL HIS GLY THR PRO SER PHE TYR SEQRES 13 A 192 VAL SER GLY LYS TYR HIS ILE ASN ASN ALA SER LEU ALA SEQRES 14 A 192 GLN ASP ASP TYR ASP THR TYR ALA GLU ASP MSE ALA ASN SEQRES 15 A 192 LEU VAL LEU PHE LEU LEU ASN LYS PRO LEU SEQRES 1 B 192 SER ASN ALA LYS ASP TYR GLN ALA GLY LYS ASN PHE THR SEQRES 2 B 192 VAL ILE HIS SER THR VAL LYS GLN PRO PRO PRO LEU VAL SEQRES 3 B 192 GLU PHE PHE SER PHE TYR CYS GLY PRO CYS TYR ALA PHE SEQRES 4 B 192 ALA GLU ARG ILE ASN VAL ASP THR ALA ILE ARG LYS ARG SEQRES 5 B 192 LEU PRO ASP ASP MSE LYS LEU GLU LYS TYR HIS VAL SER SEQRES 6 B 192 GLN MSE GLY PRO LEU GLY PRO ALA LEU THR GLU ALA TRP SEQRES 7 B 192 ALA VAL ALA GLN TYR ALA GLY VAL ASP GLY LYS VAL GLU SEQRES 8 B 192 LYS LEU LEU PHE GLU GLY LEU GLN VAL LYS ARG ASP ILE SEQRES 9 B 192 LYS THR ALA ALA ASP ILE VAL LYS VAL PHE ASN GLN LEU SEQRES 10 B 192 GLY ILE THR SER GLU LYS TYR ALA GLU MSE GLN SER ASN SEQRES 11 B 192 PHE MSE VAL LYS ALA LEU ILE ALA ARG GLN ASP ASN LEU SEQRES 12 B 192 VAL GLU LYS MSE LYS VAL HIS GLY THR PRO SER PHE TYR SEQRES 13 B 192 VAL SER GLY LYS TYR HIS ILE ASN ASN ALA SER LEU ALA SEQRES 14 B 192 GLN ASP ASP TYR ASP THR TYR ALA GLU ASP MSE ALA ASN SEQRES 15 B 192 LEU VAL LEU PHE LEU LEU ASN LYS PRO LEU SEQRES 1 C 192 SER ASN ALA LYS ASP TYR GLN ALA GLY LYS ASN PHE THR SEQRES 2 C 192 VAL ILE HIS SER THR VAL LYS GLN PRO PRO PRO LEU VAL SEQRES 3 C 192 GLU PHE PHE SER PHE TYR CYS GLY PRO CYS TYR ALA PHE SEQRES 4 C 192 ALA GLU ARG ILE ASN VAL ASP THR ALA ILE ARG LYS ARG SEQRES 5 C 192 LEU PRO ASP ASP MSE LYS LEU GLU LYS TYR HIS VAL SER SEQRES 6 C 192 GLN MSE GLY PRO LEU GLY PRO ALA LEU THR GLU ALA TRP SEQRES 7 C 192 ALA VAL ALA GLN TYR ALA GLY VAL ASP GLY LYS VAL GLU SEQRES 8 C 192 LYS LEU LEU PHE GLU GLY LEU GLN VAL LYS ARG ASP ILE SEQRES 9 C 192 LYS THR ALA ALA ASP ILE VAL LYS VAL PHE ASN GLN LEU SEQRES 10 C 192 GLY ILE THR SER GLU LYS TYR ALA GLU MSE GLN SER ASN SEQRES 11 C 192 PHE MSE VAL LYS ALA LEU ILE ALA ARG GLN ASP ASN LEU SEQRES 12 C 192 VAL GLU LYS MSE LYS VAL HIS GLY THR PRO SER PHE TYR SEQRES 13 C 192 VAL SER GLY LYS TYR HIS ILE ASN ASN ALA SER LEU ALA SEQRES 14 C 192 GLN ASP ASP TYR ASP THR TYR ALA GLU ASP MSE ALA ASN SEQRES 15 C 192 LEU VAL LEU PHE LEU LEU ASN LYS PRO LEU SEQRES 1 D 192 SER ASN ALA LYS ASP TYR GLN ALA GLY LYS ASN PHE THR SEQRES 2 D 192 VAL ILE HIS SER THR VAL LYS GLN PRO PRO PRO LEU VAL SEQRES 3 D 192 GLU PHE PHE SER PHE TYR CYS GLY PRO CYS TYR ALA PHE SEQRES 4 D 192 ALA GLU ARG ILE ASN VAL ASP THR ALA ILE ARG LYS ARG SEQRES 5 D 192 LEU PRO ASP ASP MSE LYS LEU GLU LYS TYR HIS VAL SER SEQRES 6 D 192 GLN MSE GLY PRO LEU GLY PRO ALA LEU THR GLU ALA TRP SEQRES 7 D 192 ALA VAL ALA GLN TYR ALA GLY VAL ASP GLY LYS VAL GLU SEQRES 8 D 192 LYS LEU LEU PHE GLU GLY LEU GLN VAL LYS ARG ASP ILE SEQRES 9 D 192 LYS THR ALA ALA ASP ILE VAL LYS VAL PHE ASN GLN LEU SEQRES 10 D 192 GLY ILE THR SER GLU LYS TYR ALA GLU MSE GLN SER ASN SEQRES 11 D 192 PHE MSE VAL LYS ALA LEU ILE ALA ARG GLN ASP ASN LEU SEQRES 12 D 192 VAL GLU LYS MSE LYS VAL HIS GLY THR PRO SER PHE TYR SEQRES 13 D 192 VAL SER GLY LYS TYR HIS ILE ASN ASN ALA SER LEU ALA SEQRES 14 D 192 GLN ASP ASP TYR ASP THR TYR ALA GLU ASP MSE ALA ASN SEQRES 15 D 192 LEU VAL LEU PHE LEU LEU ASN LYS PRO LEU MODRES 6DXN MSE A 87 MET MODIFIED RESIDUE MODRES 6DXN MSE A 97 MET MODIFIED RESIDUE MODRES 6DXN MSE A 157 MET MODIFIED RESIDUE MODRES 6DXN MSE A 162 MET MODIFIED RESIDUE MODRES 6DXN MSE A 177 MET MODIFIED RESIDUE MODRES 6DXN MSE A 210 MET MODIFIED RESIDUE MODRES 6DXN MSE B 87 MET MODIFIED RESIDUE MODRES 6DXN MSE B 97 MET MODIFIED RESIDUE MODRES 6DXN MSE B 157 MET MODIFIED RESIDUE MODRES 6DXN MSE B 162 MET MODIFIED RESIDUE MODRES 6DXN MSE B 177 MET MODIFIED RESIDUE MODRES 6DXN MSE B 210 MET MODIFIED RESIDUE MODRES 6DXN MSE C 87 MET MODIFIED RESIDUE MODRES 6DXN MSE C 97 MET MODIFIED RESIDUE MODRES 6DXN MSE C 157 MET MODIFIED RESIDUE MODRES 6DXN MSE C 162 MET MODIFIED RESIDUE MODRES 6DXN MSE C 177 MET MODIFIED RESIDUE MODRES 6DXN MSE C 210 MET MODIFIED RESIDUE MODRES 6DXN MSE D 87 MET MODIFIED RESIDUE MODRES 6DXN MSE D 97 MET MODIFIED RESIDUE MODRES 6DXN MSE D 157 MET MODIFIED RESIDUE MODRES 6DXN MSE D 162 MET MODIFIED RESIDUE MODRES 6DXN MSE D 177 MET MODIFIED RESIDUE MODRES 6DXN MSE D 210 MET MODIFIED RESIDUE HET MSE A 87 16 HET MSE A 97 8 HET MSE A 157 8 HET MSE A 162 16 HET MSE A 177 8 HET MSE A 210 8 HET MSE B 87 8 HET MSE B 97 8 HET MSE B 157 8 HET MSE B 162 8 HET MSE B 177 8 HET MSE B 210 8 HET MSE C 87 8 HET MSE C 97 8 HET MSE C 157 8 HET MSE C 162 8 HET MSE C 177 8 HET MSE C 210 8 HET MSE D 87 8 HET MSE D 97 8 HET MSE D 157 8 HET MSE D 162 16 HET MSE D 177 8 HET MSE D 210 8 HET PGE A 301 10 HET PGE B 301 10 HET PGE C 301 10 HETNAM MSE SELENOMETHIONINE HETNAM PGE TRIETHYLENE GLYCOL FORMUL 1 MSE 24(C5 H11 N O2 SE) FORMUL 5 PGE 3(C6 H14 O4) FORMUL 8 HOH *365(H2 O) HELIX 1 AA1 CYS A 63 GLU A 71 1 9 HELIX 2 AA2 ASN A 74 LEU A 83 1 10 HELIX 3 AA3 LEU A 100 ALA A 114 1 15 HELIX 4 AA4 VAL A 116 VAL A 130 1 15 HELIX 5 AA5 THR A 136 GLN A 146 1 11 HELIX 6 AA6 THR A 150 ASN A 160 1 11 HELIX 7 AA7 ASN A 160 MSE A 177 1 18 HELIX 8 AA8 ASN A 195 LEU A 198 5 4 HELIX 9 AA9 ASP A 202 ASN A 219 1 18 HELIX 10 AB1 CYS B 63 GLU B 71 1 9 HELIX 11 AB2 ASN B 74 ARG B 82 1 9 HELIX 12 AB3 LEU B 100 ALA B 114 1 15 HELIX 13 AB4 VAL B 116 VAL B 130 1 15 HELIX 14 AB5 THR B 136 GLY B 148 1 13 HELIX 15 AB6 THR B 150 SER B 159 1 10 HELIX 16 AB7 ASN B 160 MSE B 177 1 18 HELIX 17 AB8 ASN B 195 LEU B 198 5 4 HELIX 18 AB9 ASP B 202 ASN B 219 1 18 HELIX 19 AC1 CYS C 63 GLU C 71 1 9 HELIX 20 AC2 ASN C 74 LYS C 81 1 8 HELIX 21 AC3 LEU C 100 ALA C 114 1 15 HELIX 22 AC4 VAL C 116 VAL C 130 1 15 HELIX 23 AC5 THR C 136 LEU C 147 1 12 HELIX 24 AC6 THR C 150 SER C 159 1 10 HELIX 25 AC7 ASN C 160 MSE C 177 1 18 HELIX 26 AC8 ASN C 195 LEU C 198 5 4 HELIX 27 AC9 ASP C 202 ASN C 219 1 18 HELIX 28 AD1 CYS D 63 GLU D 71 1 9 HELIX 29 AD2 ASN D 74 LYS D 81 1 8 HELIX 30 AD3 LEU D 100 ALA D 114 1 15 HELIX 31 AD4 VAL D 116 VAL D 130 1 15 HELIX 32 AD5 THR D 136 LEU D 147 1 12 HELIX 33 AD6 THR D 150 ASN D 160 1 11 HELIX 34 AD7 ASN D 160 MSE D 177 1 18 HELIX 35 AD8 ASN D 195 LEU D 198 5 4 HELIX 36 AD9 ASP D 202 ASN D 219 1 18 SHEET 1 AA1 5 PHE A 42 VAL A 44 0 SHEET 2 AA1 5 TYR A 191 ILE A 193 -1 O HIS A 192 N THR A 43 SHEET 3 AA1 5 SER A 184 VAL A 187 -1 N VAL A 187 O TYR A 191 SHEET 4 AA1 5 LEU A 55 PHE A 59 -1 N PHE A 58 O SER A 184 SHEET 5 AA1 5 GLU A 90 HIS A 93 1 O GLU A 90 N GLU A 57 SHEET 1 AA2 5 PHE B 42 VAL B 44 0 SHEET 2 AA2 5 TYR B 191 ILE B 193 -1 O HIS B 192 N THR B 43 SHEET 3 AA2 5 SER B 184 VAL B 187 -1 N PHE B 185 O ILE B 193 SHEET 4 AA2 5 LEU B 55 PHE B 59 -1 N PHE B 58 O SER B 184 SHEET 5 AA2 5 GLU B 90 HIS B 93 1 O GLU B 90 N GLU B 57 SHEET 1 AA3 5 PHE C 42 VAL C 44 0 SHEET 2 AA3 5 TYR C 191 ILE C 193 -1 O HIS C 192 N THR C 43 SHEET 3 AA3 5 SER C 184 VAL C 187 -1 N VAL C 187 O TYR C 191 SHEET 4 AA3 5 LEU C 55 PHE C 59 -1 N PHE C 58 O SER C 184 SHEET 5 AA3 5 GLU C 90 HIS C 93 1 O TYR C 92 N PHE C 59 SHEET 1 AA4 5 PHE D 42 VAL D 44 0 SHEET 2 AA4 5 TYR D 191 ILE D 193 -1 O HIS D 192 N THR D 43 SHEET 3 AA4 5 SER D 184 VAL D 187 -1 N VAL D 187 O TYR D 191 SHEET 4 AA4 5 LEU D 55 PHE D 59 -1 N PHE D 58 O SER D 184 SHEET 5 AA4 5 GLU D 90 HIS D 93 1 O GLU D 90 N GLU D 57 LINK C ASP A 86 N AMSE A 87 1555 1555 1.34 LINK C ASP A 86 N BMSE A 87 1555 1555 1.34 LINK C AMSE A 87 N LYS A 88 1555 1555 1.34 LINK C BMSE A 87 N LYS A 88 1555 1555 1.34 LINK C GLN A 96 N MSE A 97 1555 1555 1.34 LINK C MSE A 97 N GLY A 98 1555 1555 1.34 LINK C AGLU A 156 N MSE A 157 1555 1555 1.34 LINK C BGLU A 156 N MSE A 157 1555 1555 1.34 LINK C MSE A 157 N GLN A 158 1555 1555 1.34 LINK C PHE A 161 N AMSE A 162 1555 1555 1.34 LINK C PHE A 161 N BMSE A 162 1555 1555 1.34 LINK C AMSE A 162 N VAL A 163 1555 1555 1.34 LINK C BMSE A 162 N VAL A 163 1555 1555 1.34 LINK C LYS A 176 N MSE A 177 1555 1555 1.34 LINK C MSE A 177 N LYS A 178 1555 1555 1.34 LINK C ASP A 209 N MSE A 210 1555 1555 1.34 LINK C MSE A 210 N ALA A 211 1555 1555 1.34 LINK C AASP B 86 N MSE B 87 1555 1555 1.34 LINK C BASP B 86 N MSE B 87 1555 1555 1.34 LINK C MSE B 87 N LYS B 88 1555 1555 1.34 LINK C GLN B 96 N MSE B 97 1555 1555 1.34 LINK C MSE B 97 N GLY B 98 1555 1555 1.34 LINK C AGLU B 156 N MSE B 157 1555 1555 1.34 LINK C BGLU B 156 N MSE B 157 1555 1555 1.34 LINK C MSE B 157 N GLN B 158 1555 1555 1.34 LINK C PHE B 161 N MSE B 162 1555 1555 1.34 LINK C MSE B 162 N VAL B 163 1555 1555 1.34 LINK C LYS B 176 N MSE B 177 1555 1555 1.34 LINK C MSE B 177 N LYS B 178 1555 1555 1.34 LINK C ASP B 209 N MSE B 210 1555 1555 1.34 LINK C MSE B 210 N ALA B 211 1555 1555 1.34 LINK C ASP C 86 N MSE C 87 1555 1555 1.34 LINK C MSE C 87 N LYS C 88 1555 1555 1.33 LINK C GLN C 96 N MSE C 97 1555 1555 1.34 LINK C MSE C 97 N GLY C 98 1555 1555 1.34 LINK C AGLU C 156 N MSE C 157 1555 1555 1.34 LINK C BGLU C 156 N MSE C 157 1555 1555 1.33 LINK C MSE C 157 N GLN C 158 1555 1555 1.34 LINK C PHE C 161 N MSE C 162 1555 1555 1.34 LINK C MSE C 162 N VAL C 163 1555 1555 1.34 LINK C LYS C 176 N MSE C 177 1555 1555 1.34 LINK C MSE C 177 N LYS C 178 1555 1555 1.34 LINK C ASP C 209 N MSE C 210 1555 1555 1.34 LINK C MSE C 210 N ALA C 211 1555 1555 1.34 LINK C ASP D 86 N MSE D 87 1555 1555 1.34 LINK C MSE D 87 N LYS D 88 1555 1555 1.34 LINK C GLN D 96 N MSE D 97 1555 1555 1.34 LINK C MSE D 97 N GLY D 98 1555 1555 1.33 LINK C AGLU D 156 N MSE D 157 1555 1555 1.34 LINK C BGLU D 156 N MSE D 157 1555 1555 1.34 LINK C MSE D 157 N GLN D 158 1555 1555 1.34 LINK C PHE D 161 N AMSE D 162 1555 1555 1.34 LINK C PHE D 161 N BMSE D 162 1555 1555 1.34 LINK C AMSE D 162 N VAL D 163 1555 1555 1.34 LINK C BMSE D 162 N VAL D 163 1555 1555 1.34 LINK C LYS D 176 N MSE D 177 1555 1555 1.34 LINK C MSE D 177 N LYS D 178 1555 1555 1.34 LINK C ASP D 209 N MSE D 210 1555 1555 1.34 LINK C MSE D 210 N ALA D 211 1555 1555 1.34 CISPEP 1 THR A 182 PRO A 183 0 -1.31 CISPEP 2 THR B 182 PRO B 183 0 -1.64 CISPEP 3 THR C 182 PRO C 183 0 -3.39 CISPEP 4 THR D 182 PRO D 183 0 -3.34 SITE 1 AC1 5 GLN A 200 ASP A 201 ASP A 202 TYR A 203 SITE 2 AC1 5 TYR A 206 SITE 1 AC2 7 LYS A 131 ARG A 132 PHE B 69 THR B 182 SITE 2 AC2 7 ASN B 195 GLN B 200 TYR B 206 SITE 1 AC3 9 PHE C 69 ASN C 195 GLN C 200 ASP C 202 SITE 2 AC3 9 TYR C 203 TYR C 206 HOH C 416 HOH C 419 SITE 3 AC3 9 LYS D 131 CRYST1 42.401 42.392 103.949 90.27 89.78 96.00 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023584 0.002477 -0.000079 0.00000 SCALE2 0.000000 0.023719 0.000101 0.00000 SCALE3 0.000000 0.000000 0.009620 0.00000