HEADER METAL BINDING PROTEIN 09-JUL-18 6E17 TITLE A131E MUTANT OF CYT P460 OF NITROSOMONAS SP. AL212 WITH NO BOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME P460; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NITROSOMONAS SP. AL212; SOURCE 3 ORGANISM_TAXID: 153948; SOURCE 4 GENE: NAL212_0896; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NITRIFICATION, AMMONIA-OXIDIZING BACTERIA, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.SMITH,K.LANCASTER REVDAT 4 11-OCT-23 6E17 1 LINK REVDAT 3 04-DEC-19 6E17 1 REMARK REVDAT 2 13-NOV-19 6E17 1 JRNL REVDAT 1 27-FEB-19 6E17 0 JRNL AUTH M.A.SMITH,S.H.MAJER,A.C.VILBERT,K.M.LANCASTER JRNL TITL CONTROLLING A BURN: OUTER-SPHERE GATING OF HYDROXYLAMINE JRNL TITL 2 OXIDATION BY A DISTAL BASE IN CYTOCHROME P460. JRNL REF CHEM SCI V. 10 3756 2019 JRNL REFN ISSN 2041-6520 JRNL PMID 31015919 JRNL DOI 10.1039/C9SC00195F REMARK 2 REMARK 2 RESOLUTION. 1.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.62 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 63916 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 3159 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.6390 - 5.5997 0.99 2777 117 0.1744 0.1931 REMARK 3 2 5.5997 - 4.4456 0.96 2595 111 0.1542 0.1675 REMARK 3 3 4.4456 - 3.8839 0.98 2670 133 0.1655 0.2004 REMARK 3 4 3.8839 - 3.5289 1.00 2639 159 0.2022 0.2185 REMARK 3 5 3.5289 - 3.2761 0.99 2687 110 0.2133 0.2371 REMARK 3 6 3.2761 - 3.0829 1.00 2679 126 0.2239 0.2524 REMARK 3 7 3.0829 - 2.9286 1.00 2677 129 0.2133 0.2634 REMARK 3 8 2.9286 - 2.8011 1.00 2683 144 0.2101 0.2468 REMARK 3 9 2.8011 - 2.6933 1.00 2631 138 0.2156 0.2667 REMARK 3 10 2.6933 - 2.6003 1.00 2687 136 0.2300 0.2732 REMARK 3 11 2.6003 - 2.5190 0.99 2657 124 0.2229 0.2491 REMARK 3 12 2.5190 - 2.4470 0.96 2574 142 0.2311 0.2833 REMARK 3 13 2.4470 - 2.3826 0.98 2598 153 0.2508 0.3089 REMARK 3 14 2.3826 - 2.3245 0.99 2626 135 0.2484 0.2753 REMARK 3 15 2.3245 - 2.2716 0.99 2664 134 0.2609 0.3107 REMARK 3 16 2.2716 - 2.2233 0.99 2594 154 0.2757 0.3303 REMARK 3 17 2.2233 - 2.1788 1.00 2667 133 0.2917 0.3305 REMARK 3 18 2.1788 - 2.1377 1.00 2645 158 0.3105 0.3587 REMARK 3 19 2.1377 - 2.0995 1.00 2633 144 0.3366 0.3458 REMARK 3 20 2.0995 - 2.0639 1.00 2665 150 0.3602 0.3836 REMARK 3 21 2.0639 - 2.0306 0.99 2583 144 0.3713 0.3539 REMARK 3 22 2.0306 - 1.9994 0.97 2607 146 0.4022 0.4102 REMARK 3 23 1.9994 - 1.9700 0.96 2519 139 0.4161 0.4499 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.100 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.016 5396 REMARK 3 ANGLE : 1.002 7338 REMARK 3 CHIRALITY : 0.057 688 REMARK 3 PLANARITY : 0.007 946 REMARK 3 DIHEDRAL : 15.737 2998 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6E17 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1000235540. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63916 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.970 REMARK 200 RESOLUTION RANGE LOW (A) : 48.640 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.04300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 38.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.04 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.12000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 6AMG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM CHLORIDE, 0.1MSODIUM REMARK 280 ACETATE, AND PEG 6000, PH 5.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 40.02250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -76.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -76.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 48.67300 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LEU A 2 REMARK 465 GLN A 3 REMARK 465 PHE A 4 REMARK 465 LYS A 5 REMARK 465 LYS A 6 REMARK 465 THR A 7 REMARK 465 LEU A 8 REMARK 465 LEU A 9 REMARK 465 SER A 10 REMARK 465 SER A 11 REMARK 465 ILE A 12 REMARK 465 ALA A 13 REMARK 465 PRO A 14 REMARK 465 VAL A 15 REMARK 465 LEU A 16 REMARK 465 LEU A 17 REMARK 465 SER A 18 REMARK 465 ILE A 19 REMARK 465 VAL A 20 REMARK 465 LEU A 21 REMARK 465 ALA A 22 REMARK 465 ASN A 23 REMARK 465 PRO A 24 REMARK 465 VAL A 25 REMARK 465 ILE A 26 REMARK 465 ALA A 27 REMARK 465 SER A 28 REMARK 465 ASP A 29 REMARK 465 ALA A 30 REMARK 465 HIS A 31 REMARK 465 HIS A 32 REMARK 465 ALA A 33 REMARK 465 HIS A 34 REMARK 465 LYS A 35 REMARK 465 GLY A 36 REMARK 465 LEU A 37 REMARK 465 SER A 195 REMARK 465 LYS A 196 REMARK 465 MET B 1 REMARK 465 LEU B 2 REMARK 465 GLN B 3 REMARK 465 PHE B 4 REMARK 465 LYS B 5 REMARK 465 LYS B 6 REMARK 465 THR B 7 REMARK 465 LEU B 8 REMARK 465 LEU B 9 REMARK 465 SER B 10 REMARK 465 SER B 11 REMARK 465 ILE B 12 REMARK 465 ALA B 13 REMARK 465 PRO B 14 REMARK 465 VAL B 15 REMARK 465 LEU B 16 REMARK 465 LEU B 17 REMARK 465 SER B 18 REMARK 465 ILE B 19 REMARK 465 VAL B 20 REMARK 465 LEU B 21 REMARK 465 ALA B 22 REMARK 465 ASN B 23 REMARK 465 PRO B 24 REMARK 465 VAL B 25 REMARK 465 ILE B 26 REMARK 465 ALA B 27 REMARK 465 SER B 28 REMARK 465 ASP B 29 REMARK 465 ALA B 30 REMARK 465 HIS B 31 REMARK 465 HIS B 32 REMARK 465 ALA B 33 REMARK 465 HIS B 34 REMARK 465 LYS B 35 REMARK 465 GLY B 36 REMARK 465 SER B 195 REMARK 465 LYS B 196 REMARK 465 MET C 1 REMARK 465 LEU C 2 REMARK 465 GLN C 3 REMARK 465 PHE C 4 REMARK 465 LYS C 5 REMARK 465 LYS C 6 REMARK 465 THR C 7 REMARK 465 LEU C 8 REMARK 465 LEU C 9 REMARK 465 SER C 10 REMARK 465 SER C 11 REMARK 465 ILE C 12 REMARK 465 ALA C 13 REMARK 465 PRO C 14 REMARK 465 VAL C 15 REMARK 465 LEU C 16 REMARK 465 LEU C 17 REMARK 465 SER C 18 REMARK 465 ILE C 19 REMARK 465 VAL C 20 REMARK 465 LEU C 21 REMARK 465 ALA C 22 REMARK 465 ASN C 23 REMARK 465 PRO C 24 REMARK 465 VAL C 25 REMARK 465 ILE C 26 REMARK 465 ALA C 27 REMARK 465 SER C 28 REMARK 465 ASP C 29 REMARK 465 ALA C 30 REMARK 465 HIS C 31 REMARK 465 HIS C 32 REMARK 465 ALA C 33 REMARK 465 HIS C 34 REMARK 465 LYS C 35 REMARK 465 GLY C 36 REMARK 465 SER C 195 REMARK 465 LYS C 196 REMARK 465 MET D 1 REMARK 465 LEU D 2 REMARK 465 GLN D 3 REMARK 465 PHE D 4 REMARK 465 LYS D 5 REMARK 465 LYS D 6 REMARK 465 THR D 7 REMARK 465 LEU D 8 REMARK 465 LEU D 9 REMARK 465 SER D 10 REMARK 465 SER D 11 REMARK 465 ILE D 12 REMARK 465 ALA D 13 REMARK 465 PRO D 14 REMARK 465 VAL D 15 REMARK 465 LEU D 16 REMARK 465 LEU D 17 REMARK 465 SER D 18 REMARK 465 ILE D 19 REMARK 465 VAL D 20 REMARK 465 LEU D 21 REMARK 465 ALA D 22 REMARK 465 ASN D 23 REMARK 465 PRO D 24 REMARK 465 VAL D 25 REMARK 465 ILE D 26 REMARK 465 ALA D 27 REMARK 465 SER D 28 REMARK 465 ASP D 29 REMARK 465 ALA D 30 REMARK 465 HIS D 31 REMARK 465 HIS D 32 REMARK 465 ALA D 33 REMARK 465 HIS D 34 REMARK 465 LYS D 35 REMARK 465 GLY D 36 REMARK 465 LEU D 37 REMARK 465 SER D 195 REMARK 465 LYS D 196 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 354 O HOH A 381 1.82 REMARK 500 O HOH A 378 O HOH A 382 1.94 REMARK 500 O PHE D 59 O HOH D 301 1.95 REMARK 500 ND HEC C 201 N NO C 202 1.96 REMARK 500 O HOH B 364 O HOH B 385 2.04 REMARK 500 O LYS A 93 O HOH A 301 2.04 REMARK 500 SG CYS C 171 CAC HEC C 201 2.05 REMARK 500 O HOH B 353 O HOH B 384 2.05 REMARK 500 O LYS C 93 O HOH C 301 2.05 REMARK 500 SG CYS B 171 CAC HEC B 201 2.06 REMARK 500 O PRO B 194 O HOH B 301 2.07 REMARK 500 O HOH C 316 O HOH C 327 2.08 REMARK 500 SG CYS D 171 CAC HEC D 201 2.08 REMARK 500 O HOH B 378 O HOH B 391 2.08 REMARK 500 O PHE C 59 O HOH C 302 2.11 REMARK 500 O HOH B 336 O HOH B 392 2.11 REMARK 500 O HOH A 303 O HOH A 373 2.14 REMARK 500 OD2 ASP D 165 O HOH D 302 2.15 REMARK 500 NA HEC B 201 N NO B 202 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 78 -58.56 -130.61 REMARK 500 ASP A 136 105.39 -163.73 REMARK 500 CYS A 168 -57.51 -139.83 REMARK 500 PHE A 182 63.66 -68.39 REMARK 500 THR B 50 109.04 -53.17 REMARK 500 TRP B 57 -164.57 -79.49 REMARK 500 LYS B 73 82.38 -157.18 REMARK 500 GLU B 78 -63.34 -134.69 REMARK 500 ASP B 136 102.79 -162.31 REMARK 500 CYS B 168 -51.58 -134.95 REMARK 500 GLU C 45 10.43 -66.14 REMARK 500 TRP C 57 -160.63 -77.98 REMARK 500 LYS C 73 82.26 -161.37 REMARK 500 GLU C 78 -64.76 -129.52 REMARK 500 TYR C 140 63.27 -117.30 REMARK 500 CYS C 168 -51.49 -134.24 REMARK 500 TRP D 57 -167.82 -71.16 REMARK 500 ASN D 70 42.61 -144.00 REMARK 500 LYS D 73 85.25 -155.34 REMARK 500 GLU D 78 -62.34 -134.53 REMARK 500 GLU D 142 42.97 -109.93 REMARK 500 CYS D 168 -42.24 -141.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 172 NE2 REMARK 620 2 HEC A 201 NA 96.8 REMARK 620 3 HEC A 201 NB 88.9 89.1 REMARK 620 4 HEC A 201 NC 87.1 174.4 86.9 REMARK 620 5 HEC A 201 ND 92.3 91.9 178.3 92.0 REMARK 620 6 NO A 202 N 172.0 86.6 83.8 89.1 94.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC B 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 172 NE2 REMARK 620 2 HEC B 201 NA 92.7 REMARK 620 3 HEC B 201 NB 93.3 88.4 REMARK 620 4 HEC B 201 NC 90.2 176.4 89.3 REMARK 620 5 HEC B 201 ND 88.5 91.9 178.1 90.3 REMARK 620 6 NO B 202 O 164.7 76.5 97.1 101.1 81.2 REMARK 620 7 NO B 202 N 166.6 74.3 83.1 102.7 95.2 14.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC C 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 172 NE2 REMARK 620 2 HEC C 201 NA 92.4 REMARK 620 3 HEC C 201 NB 91.3 92.4 REMARK 620 4 HEC C 201 NC 91.8 175.1 85.1 REMARK 620 5 HEC C 201 ND 88.1 92.1 175.5 90.4 REMARK 620 6 NO C 202 O 164.3 74.4 97.7 101.8 83.9 REMARK 620 7 NO C 202 N 152.1 85.0 116.5 92.3 64.3 21.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC D 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 172 NE2 REMARK 620 2 HEC D 201 NA 88.4 REMARK 620 3 HEC D 201 NB 95.2 93.1 REMARK 620 4 HEC D 201 NC 99.7 172.0 85.9 REMARK 620 5 HEC D 201 ND 89.1 89.5 175.1 91.0 REMARK 620 6 NO D 202 N 166.3 85.8 72.8 86.3 103.3 REMARK 620 7 NO D 202 O 151.4 66.2 98.9 106.1 78.3 31.7 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEC A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NO A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NO B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NO C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NO D 202 DBREF 6E17 A 1 196 UNP F9ZFJ0 F9ZFJ0_9PROT 1 196 DBREF 6E17 B 1 196 UNP F9ZFJ0 F9ZFJ0_9PROT 1 196 DBREF 6E17 C 1 196 UNP F9ZFJ0 F9ZFJ0_9PROT 1 196 DBREF 6E17 D 1 196 UNP F9ZFJ0 F9ZFJ0_9PROT 1 196 SEQADV 6E17 GLU A 131 UNP F9ZFJ0 ALA 131 ENGINEERED MUTATION SEQADV 6E17 GLU B 131 UNP F9ZFJ0 ALA 131 ENGINEERED MUTATION SEQADV 6E17 GLU C 131 UNP F9ZFJ0 ALA 131 ENGINEERED MUTATION SEQADV 6E17 GLU D 131 UNP F9ZFJ0 ALA 131 ENGINEERED MUTATION SEQRES 1 A 196 MET LEU GLN PHE LYS LYS THR LEU LEU SER SER ILE ALA SEQRES 2 A 196 PRO VAL LEU LEU SER ILE VAL LEU ALA ASN PRO VAL ILE SEQRES 3 A 196 ALA SER ASP ALA HIS HIS ALA HIS LYS GLY LEU ASN TYR SEQRES 4 A 196 GLY SER PHE THR LYS GLU HIS VAL LEU LEU THR PRO LYS SEQRES 5 A 196 GLY TYR ARG GLU TRP VAL PHE ILE GLY ALA SER VAL THR SEQRES 6 A 196 PRO ASN GLU LEU ASN ASP ASP LYS ALA ALA PHE PRO GLU SEQRES 7 A 196 PHE HIS ASN VAL TYR ILE ASP PRO THR SER TRP GLY HIS SEQRES 8 A 196 TRP LYS LYS THR GLY GLU PHE ARG ASP GLY THR VAL ILE SEQRES 9 A 196 VAL LYS GLU LEU ALA GLY VAL GLY SER LYS ALA SER PRO SEQRES 10 A 196 SER GLY ASN GLY TYR PHE PRO GLY GLU PHE ASN GLY ILE SEQRES 11 A 196 GLU ALA MET VAL LYS ASP SER LYS ARG TYR PRO GLU ARG SEQRES 12 A 196 PRO GLY ASN TRP ALA PHE PHE GLY PHE GLU SER TYR GLU SEQRES 13 A 196 ALA LYS GLN GLY ILE ILE GLN THR ASP GLU THR CYS ALA SEQRES 14 A 196 ALA CYS HIS LYS GLU HIS ALA ALA HIS ASP MET VAL PHE SEQRES 15 A 196 THR GLN PHE TYR PRO VAL LEU ARG ALA GLY LYS PRO SER SEQRES 16 A 196 LYS SEQRES 1 B 196 MET LEU GLN PHE LYS LYS THR LEU LEU SER SER ILE ALA SEQRES 2 B 196 PRO VAL LEU LEU SER ILE VAL LEU ALA ASN PRO VAL ILE SEQRES 3 B 196 ALA SER ASP ALA HIS HIS ALA HIS LYS GLY LEU ASN TYR SEQRES 4 B 196 GLY SER PHE THR LYS GLU HIS VAL LEU LEU THR PRO LYS SEQRES 5 B 196 GLY TYR ARG GLU TRP VAL PHE ILE GLY ALA SER VAL THR SEQRES 6 B 196 PRO ASN GLU LEU ASN ASP ASP LYS ALA ALA PHE PRO GLU SEQRES 7 B 196 PHE HIS ASN VAL TYR ILE ASP PRO THR SER TRP GLY HIS SEQRES 8 B 196 TRP LYS LYS THR GLY GLU PHE ARG ASP GLY THR VAL ILE SEQRES 9 B 196 VAL LYS GLU LEU ALA GLY VAL GLY SER LYS ALA SER PRO SEQRES 10 B 196 SER GLY ASN GLY TYR PHE PRO GLY GLU PHE ASN GLY ILE SEQRES 11 B 196 GLU ALA MET VAL LYS ASP SER LYS ARG TYR PRO GLU ARG SEQRES 12 B 196 PRO GLY ASN TRP ALA PHE PHE GLY PHE GLU SER TYR GLU SEQRES 13 B 196 ALA LYS GLN GLY ILE ILE GLN THR ASP GLU THR CYS ALA SEQRES 14 B 196 ALA CYS HIS LYS GLU HIS ALA ALA HIS ASP MET VAL PHE SEQRES 15 B 196 THR GLN PHE TYR PRO VAL LEU ARG ALA GLY LYS PRO SER SEQRES 16 B 196 LYS SEQRES 1 C 196 MET LEU GLN PHE LYS LYS THR LEU LEU SER SER ILE ALA SEQRES 2 C 196 PRO VAL LEU LEU SER ILE VAL LEU ALA ASN PRO VAL ILE SEQRES 3 C 196 ALA SER ASP ALA HIS HIS ALA HIS LYS GLY LEU ASN TYR SEQRES 4 C 196 GLY SER PHE THR LYS GLU HIS VAL LEU LEU THR PRO LYS SEQRES 5 C 196 GLY TYR ARG GLU TRP VAL PHE ILE GLY ALA SER VAL THR SEQRES 6 C 196 PRO ASN GLU LEU ASN ASP ASP LYS ALA ALA PHE PRO GLU SEQRES 7 C 196 PHE HIS ASN VAL TYR ILE ASP PRO THR SER TRP GLY HIS SEQRES 8 C 196 TRP LYS LYS THR GLY GLU PHE ARG ASP GLY THR VAL ILE SEQRES 9 C 196 VAL LYS GLU LEU ALA GLY VAL GLY SER LYS ALA SER PRO SEQRES 10 C 196 SER GLY ASN GLY TYR PHE PRO GLY GLU PHE ASN GLY ILE SEQRES 11 C 196 GLU ALA MET VAL LYS ASP SER LYS ARG TYR PRO GLU ARG SEQRES 12 C 196 PRO GLY ASN TRP ALA PHE PHE GLY PHE GLU SER TYR GLU SEQRES 13 C 196 ALA LYS GLN GLY ILE ILE GLN THR ASP GLU THR CYS ALA SEQRES 14 C 196 ALA CYS HIS LYS GLU HIS ALA ALA HIS ASP MET VAL PHE SEQRES 15 C 196 THR GLN PHE TYR PRO VAL LEU ARG ALA GLY LYS PRO SER SEQRES 16 C 196 LYS SEQRES 1 D 196 MET LEU GLN PHE LYS LYS THR LEU LEU SER SER ILE ALA SEQRES 2 D 196 PRO VAL LEU LEU SER ILE VAL LEU ALA ASN PRO VAL ILE SEQRES 3 D 196 ALA SER ASP ALA HIS HIS ALA HIS LYS GLY LEU ASN TYR SEQRES 4 D 196 GLY SER PHE THR LYS GLU HIS VAL LEU LEU THR PRO LYS SEQRES 5 D 196 GLY TYR ARG GLU TRP VAL PHE ILE GLY ALA SER VAL THR SEQRES 6 D 196 PRO ASN GLU LEU ASN ASP ASP LYS ALA ALA PHE PRO GLU SEQRES 7 D 196 PHE HIS ASN VAL TYR ILE ASP PRO THR SER TRP GLY HIS SEQRES 8 D 196 TRP LYS LYS THR GLY GLU PHE ARG ASP GLY THR VAL ILE SEQRES 9 D 196 VAL LYS GLU LEU ALA GLY VAL GLY SER LYS ALA SER PRO SEQRES 10 D 196 SER GLY ASN GLY TYR PHE PRO GLY GLU PHE ASN GLY ILE SEQRES 11 D 196 GLU ALA MET VAL LYS ASP SER LYS ARG TYR PRO GLU ARG SEQRES 12 D 196 PRO GLY ASN TRP ALA PHE PHE GLY PHE GLU SER TYR GLU SEQRES 13 D 196 ALA LYS GLN GLY ILE ILE GLN THR ASP GLU THR CYS ALA SEQRES 14 D 196 ALA CYS HIS LYS GLU HIS ALA ALA HIS ASP MET VAL PHE SEQRES 15 D 196 THR GLN PHE TYR PRO VAL LEU ARG ALA GLY LYS PRO SER SEQRES 16 D 196 LYS HET HEC A 201 43 HET NO A 202 2 HET HEC B 201 43 HET NO B 202 2 HET HEC C 201 43 HET NO C 202 2 HET HEC D 201 43 HET NO D 202 2 HETNAM HEC HEME C HETNAM NO NITRIC OXIDE HETSYN NO NITROGEN MONOXIDE FORMUL 5 HEC 4(C34 H34 FE N4 O4) FORMUL 6 NO 4(N O) FORMUL 13 HOH *241(H2 O) HELIX 1 AA1 GLY A 53 TRP A 57 5 5 HELIX 2 AA2 PRO A 66 ASN A 70 5 5 HELIX 3 AA3 ASP A 85 GLY A 96 1 12 HELIX 4 AA4 ARG A 143 GLY A 145 5 3 HELIX 5 AA5 CYS A 168 ALA A 176 1 9 HELIX 6 AA6 PHE A 182 PHE A 185 5 4 HELIX 7 AA7 TYR A 186 LYS A 193 1 8 HELIX 8 AA8 GLY B 53 TRP B 57 5 5 HELIX 9 AA9 PRO B 66 ASN B 70 5 5 HELIX 10 AB1 ASP B 85 GLY B 96 1 12 HELIX 11 AB2 ARG B 143 GLY B 145 5 3 HELIX 12 AB3 CYS B 168 ALA B 176 1 9 HELIX 13 AB4 PHE B 182 PHE B 185 5 4 HELIX 14 AB5 TYR B 186 LYS B 193 1 8 HELIX 15 AB6 GLY C 53 TRP C 57 5 5 HELIX 16 AB7 PRO C 66 ASN C 70 5 5 HELIX 17 AB8 ASP C 85 GLY C 96 1 12 HELIX 18 AB9 ARG C 143 GLY C 145 5 3 HELIX 19 AC1 CYS C 168 ALA C 176 1 9 HELIX 20 AC2 PHE C 182 PHE C 185 5 4 HELIX 21 AC3 TYR C 186 LYS C 193 1 8 HELIX 22 AC4 GLY D 53 TRP D 57 5 5 HELIX 23 AC5 PRO D 66 ASN D 70 5 5 HELIX 24 AC6 ASP D 85 GLY D 96 1 12 HELIX 25 AC7 ARG D 143 GLY D 145 5 3 HELIX 26 AC8 CYS D 168 ALA D 176 1 9 HELIX 27 AC9 PHE D 182 PHE D 185 5 4 HELIX 28 AD1 TYR D 186 LYS D 193 1 8 SHEET 1 AA1 6 VAL A 58 VAL A 64 0 SHEET 2 AA1 6 PHE A 79 ILE A 84 -1 O HIS A 80 N SER A 63 SHEET 3 AA1 6 THR A 102 SER A 116 -1 O GLU A 107 N ASN A 81 SHEET 4 AA1 6 GLY A 119 LYS A 135 -1 O GLY A 129 N LEU A 108 SHEET 5 AA1 6 TRP A 147 GLY A 151 -1 O ALA A 148 N VAL A 134 SHEET 6 AA1 6 ILE A 161 ILE A 162 -1 O ILE A 161 N GLY A 151 SHEET 1 AA2 6 VAL B 58 VAL B 64 0 SHEET 2 AA2 6 PHE B 79 ILE B 84 -1 O VAL B 82 N ILE B 60 SHEET 3 AA2 6 VAL B 103 SER B 116 -1 O GLU B 107 N ASN B 81 SHEET 4 AA2 6 GLY B 119 LYS B 135 -1 O GLU B 131 N LYS B 106 SHEET 5 AA2 6 TRP B 147 GLY B 151 -1 O ALA B 148 N VAL B 134 SHEET 6 AA2 6 ILE B 161 ILE B 162 -1 O ILE B 161 N GLY B 151 SHEET 1 AA3 6 VAL C 58 VAL C 64 0 SHEET 2 AA3 6 PHE C 79 ILE C 84 -1 O ILE C 84 N VAL C 58 SHEET 3 AA3 6 THR C 102 SER C 116 -1 O GLU C 107 N ASN C 81 SHEET 4 AA3 6 GLY C 119 LYS C 135 -1 O ASN C 128 N LEU C 108 SHEET 5 AA3 6 TRP C 147 GLY C 151 -1 O PHE C 150 N ALA C 132 SHEET 6 AA3 6 ILE C 161 ILE C 162 -1 O ILE C 161 N GLY C 151 SHEET 1 AA4 6 VAL D 58 VAL D 64 0 SHEET 2 AA4 6 PHE D 79 ILE D 84 -1 O HIS D 80 N SER D 63 SHEET 3 AA4 6 THR D 102 SER D 116 -1 O GLU D 107 N ASN D 81 SHEET 4 AA4 6 GLY D 119 LYS D 135 -1 O PHE D 123 N GLY D 112 SHEET 5 AA4 6 TRP D 147 GLY D 151 -1 O PHE D 150 N ALA D 132 SHEET 6 AA4 6 ILE D 161 ILE D 162 -1 O ILE D 161 N GLY D 151 LINK NZ LYS A 106 CHA HEC A 201 1555 1555 1.38 LINK SG CYS A 168 CAB HEC A 201 1555 1555 1.72 LINK SG CYS A 171 CAC HEC A 201 1555 1555 1.95 LINK NZ LYS B 106 CHA HEC B 201 1555 1555 1.45 LINK SG CYS B 168 CAB HEC B 201 1555 1555 1.92 LINK NZ LYS C 106 CHA HEC C 201 1555 1555 1.48 LINK SG CYS C 168 CAB HEC C 201 1555 1555 1.72 LINK NZ LYS D 106 CHA HEC D 201 1555 1555 1.53 LINK SG CYS D 168 CAB HEC D 201 1555 1555 1.86 LINK NE2 HIS A 172 FE HEC A 201 1555 1555 2.05 LINK FE HEC A 201 N NO A 202 1555 1555 1.51 LINK NE2 HIS B 172 FE HEC B 201 1555 1555 2.10 LINK FE HEC B 201 O NO B 202 1555 1555 2.74 LINK FE HEC B 201 N NO B 202 1555 1555 1.39 LINK NE2 HIS C 172 FE HEC C 201 1555 1555 2.18 LINK FE HEC C 201 O NO C 202 1555 1555 2.79 LINK FE HEC C 201 N NO C 202 1555 1555 1.57 LINK NE2 HIS D 172 FE HEC D 201 1555 1555 2.16 LINK FE HEC D 201 N NO D 202 1555 1555 1.78 LINK FE HEC D 201 O NO D 202 1555 1555 2.63 CISPEP 1 PRO A 77 GLU A 78 0 -11.76 CISPEP 2 PRO B 77 GLU B 78 0 -5.11 CISPEP 3 PRO C 77 GLU C 78 0 -12.37 CISPEP 4 PRO D 77 GLU D 78 0 -7.84 SITE 1 AC1 22 PHE A 76 HIS A 80 VAL A 82 LYS A 106 SITE 2 AC1 22 GLU A 131 MET A 133 PHE A 150 THR A 167 SITE 3 AC1 22 CYS A 168 CYS A 171 HIS A 172 MET A 180 SITE 4 AC1 22 VAL A 181 PHE A 182 PHE A 185 TYR A 186 SITE 5 AC1 22 NO A 202 HOH A 329 SER B 116 PRO B 117 SITE 6 AC1 22 SER B 118 PHE B 123 SITE 1 AC2 3 PHE A 76 HIS A 172 HEC A 201 SITE 1 AC3 3 PHE B 76 HIS B 172 HEC B 201 SITE 1 AC4 3 PHE C 76 HIS C 172 HEC C 201 SITE 1 AC5 3 PHE D 76 LYS D 106 HEC D 201 CRYST1 48.673 80.045 119.170 90.00 92.57 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020545 0.000000 0.000921 0.00000 SCALE2 0.000000 0.012493 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008400 0.00000