HEADER LYASE 12-JUL-18 6E2U TITLE MDDEF IN COMPLEX WITH MVAPP, AMPPCP AND MAGNESIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: MEVALONATE DIPHOSPHATE DECARBOXYLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DIPHOSPHOMEVALONATE DECARBOXYLASE; COMPND 5 EC: 4.1.1.33; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS; SOURCE 3 ORGANISM_COMMON: STREPTOCOCCUS FAECALIS; SOURCE 4 ORGANISM_TAXID: 1351; SOURCE 5 GENE: MVAD, B6S42_02310; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MEVALONATE DIPHOSPHATE DECARBOXYLASE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR C.V.STAUFFACHER,C.-L.CHEN REVDAT 3 11-OCT-23 6E2U 1 REMARK REVDAT 2 19-AUG-20 6E2U 1 JRNL REVDAT 1 15-JAN-20 6E2U 0 JRNL AUTH C.L.CHEN,L.N.PAUL,J.C.MERMOUD,C.N.STEUSSY,C.V.STAUFFACHER JRNL TITL VISUALIZING THE ENZYME MECHANISM OF MEVALONATE DIPHOSPHATE JRNL TITL 2 DECARBOXYLASE. JRNL REF NAT COMMUN V. 11 3969 2020 JRNL REFN ESSN 2041-1723 JRNL PMID 32769976 JRNL DOI 10.1038/S41467-020-17733-0 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.83 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 3 NUMBER OF REFLECTIONS : 22148 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.170 REMARK 3 FREE R VALUE TEST SET COUNT : 1145 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.8362 - 4.0871 0.95 2777 163 0.1629 0.1737 REMARK 3 2 4.0871 - 3.2455 0.90 2515 147 0.1919 0.2166 REMARK 3 3 3.2455 - 2.8357 0.94 2605 148 0.2200 0.2356 REMARK 3 4 2.8357 - 2.5766 0.96 2615 151 0.2091 0.2543 REMARK 3 5 2.5766 - 2.3920 0.97 2661 126 0.2099 0.2246 REMARK 3 6 2.3920 - 2.2510 0.99 2708 139 0.2105 0.2383 REMARK 3 7 2.2510 - 2.1383 0.97 2641 141 0.2065 0.2546 REMARK 3 8 2.1383 - 2.0453 0.91 2481 130 0.2283 0.2325 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.980 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2631 REMARK 3 ANGLE : 1.006 3570 REMARK 3 CHIRALITY : 0.054 392 REMARK 3 PLANARITY : 0.006 454 REMARK 3 DIHEDRAL : 16.544 940 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6E2U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1000235629. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH2R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23332 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.045 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 38.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5V2L REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALS WERE PRODUCED UNDER THE REMARK 280 CONDITIONS OF 1.6 M AMMONIUM SULFATE, 50 MM SODIUM ACETATE, PH REMARK 280 4.6; BUFFER EXCHANGE WAS PERFORMED UNDER THE CONDITIONS OF 26 % REMARK 280 PEG 3350, 5 MM MGCL2 AND 50 MM SODIUM ACETATE, PH 4.6; CRYSTALS REMARK 280 WERE SOAKED WITH MVAPP, FOLLOWED BY AMPPCP. THEN CONDENSATION REMARK 280 WAS CONDUCTED AT 30 % PEG 3350, 15% PEG 400, 5 MM MGCL2, 50 MM REMARK 280 SODIUM ACETATE, PH 4.6, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 40.01850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.51800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.01850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.51800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -69.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 GLY A -14 REMARK 465 VAL A -13 REMARK 465 ASP A -12 REMARK 465 LEU A -11 REMARK 465 GLY A -10 REMARK 465 THR A -9 REMARK 465 GLU A -8 REMARK 465 ASN A -7 REMARK 465 LEU A -6 REMARK 465 TYR A -5 REMARK 465 PHE A -4 REMARK 465 GLN A -3 REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 LYS A 327 REMARK 465 GLY A 328 REMARK 465 MET A 329 REMARK 465 ASP A 330 REMARK 465 LYS A 331 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 100 13.25 58.88 REMARK 500 ASP A 184 29.04 -77.03 REMARK 500 GLU A 186 173.14 -54.41 REMARK 500 ASP A 282 -147.37 -105.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 106 OG REMARK 620 2 DP6 A 401 O1A 83.9 REMARK 620 3 ACP A 402 O2G 149.7 91.5 REMARK 620 4 ACP A 402 O2B 78.4 138.6 85.7 REMARK 620 5 ACP A 402 O2A 71.4 72.8 78.7 66.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DP6 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACP A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 403 DBREF 6E2U A 1 331 UNP Q9FD68 Q9FD68_ENTFL 1 331 SEQADV 6E2U MET A -23 UNP Q9FD68 EXPRESSION TAG SEQADV 6E2U HIS A -22 UNP Q9FD68 EXPRESSION TAG SEQADV 6E2U HIS A -21 UNP Q9FD68 EXPRESSION TAG SEQADV 6E2U HIS A -20 UNP Q9FD68 EXPRESSION TAG SEQADV 6E2U HIS A -19 UNP Q9FD68 EXPRESSION TAG SEQADV 6E2U HIS A -18 UNP Q9FD68 EXPRESSION TAG SEQADV 6E2U HIS A -17 UNP Q9FD68 EXPRESSION TAG SEQADV 6E2U HIS A -16 UNP Q9FD68 EXPRESSION TAG SEQADV 6E2U HIS A -15 UNP Q9FD68 EXPRESSION TAG SEQADV 6E2U GLY A -14 UNP Q9FD68 EXPRESSION TAG SEQADV 6E2U VAL A -13 UNP Q9FD68 EXPRESSION TAG SEQADV 6E2U ASP A -12 UNP Q9FD68 EXPRESSION TAG SEQADV 6E2U LEU A -11 UNP Q9FD68 EXPRESSION TAG SEQADV 6E2U GLY A -10 UNP Q9FD68 EXPRESSION TAG SEQADV 6E2U THR A -9 UNP Q9FD68 EXPRESSION TAG SEQADV 6E2U GLU A -8 UNP Q9FD68 EXPRESSION TAG SEQADV 6E2U ASN A -7 UNP Q9FD68 EXPRESSION TAG SEQADV 6E2U LEU A -6 UNP Q9FD68 EXPRESSION TAG SEQADV 6E2U TYR A -5 UNP Q9FD68 EXPRESSION TAG SEQADV 6E2U PHE A -4 UNP Q9FD68 EXPRESSION TAG SEQADV 6E2U GLN A -3 UNP Q9FD68 EXPRESSION TAG SEQADV 6E2U SER A -2 UNP Q9FD68 EXPRESSION TAG SEQADV 6E2U ASN A -1 UNP Q9FD68 EXPRESSION TAG SEQADV 6E2U ALA A 0 UNP Q9FD68 EXPRESSION TAG SEQRES 1 A 355 MET HIS HIS HIS HIS HIS HIS HIS HIS GLY VAL ASP LEU SEQRES 2 A 355 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA MET LEU SEQRES 3 A 355 SER GLY LYS ALA ARG ALA HIS THR ASN ILE ALA LEU ILE SEQRES 4 A 355 LYS TYR TRP GLY LYS ALA ASN GLU GLU TYR ILE LEU PRO SEQRES 5 A 355 MET ASN SER SER LEU SER LEU THR LEU ASP ALA PHE TYR SEQRES 6 A 355 THR GLU THR THR VAL THR PHE ASP ALA HIS TYR SER GLU SEQRES 7 A 355 ASP VAL PHE ILE LEU ASN GLY ILE LEU GLN ASN GLU LYS SEQRES 8 A 355 GLN THR LYS LYS VAL LYS GLU PHE LEU ASN LEU VAL ARG SEQRES 9 A 355 GLN GLN ALA ASP CYS THR TRP PHE ALA LYS VAL GLU SER SEQRES 10 A 355 GLN ASN PHE VAL PRO THR ALA ALA GLY LEU ALA SER SER SEQRES 11 A 355 ALA SER GLY LEU ALA ALA LEU ALA GLY ALA CYS ASN VAL SEQRES 12 A 355 ALA LEU GLY LEU ASN LEU SER ALA LYS ASP LEU SER ARG SEQRES 13 A 355 LEU ALA ARG ARG GLY SER GLY SER ALA CYS ARG SER ILE SEQRES 14 A 355 PHE GLY GLY PHE ALA GLN TRP ASN LYS GLY HIS SER ASP SEQRES 15 A 355 GLU THR SER PHE ALA GLU ASN ILE PRO ALA ASN ASN TRP SEQRES 16 A 355 GLU ASN GLU LEU ALA MET LEU PHE ILE LEU ILE ASN ASP SEQRES 17 A 355 GLY GLU LYS ASP VAL SER SER ARG ASP GLY MET LYS ARG SEQRES 18 A 355 THR VAL GLU THR SER SER PHE TYR GLN GLY TRP LEU ASP SEQRES 19 A 355 ASN VAL GLU LYS ASP LEU SER GLN VAL HIS GLU ALA ILE SEQRES 20 A 355 LYS THR LYS ASP PHE PRO ARG LEU GLY GLU ILE ILE GLU SEQRES 21 A 355 ALA ASN GLY LEU ARG MET HIS GLY THR THR LEU GLY ALA SEQRES 22 A 355 VAL PRO PRO PHE THR TYR TRP SER PRO GLY SER LEU GLN SEQRES 23 A 355 ALA MET ALA LEU VAL ARG GLN ALA ARG ALA LYS GLY ILE SEQRES 24 A 355 PRO CYS TYR PHE THR MET ASP ALA GLY PRO ASN VAL LYS SEQRES 25 A 355 VAL LEU VAL GLU LYS LYS ASN LEU GLU ALA LEU LYS THR SEQRES 26 A 355 PHE LEU SER GLU HIS PHE SER LYS GLU GLN LEU VAL PRO SEQRES 27 A 355 ALA PHE ALA GLY PRO GLY ILE GLU LEU PHE GLU THR LYS SEQRES 28 A 355 GLY MET ASP LYS HET DP6 A 401 28 HET ACP A 402 45 HET MG A 403 1 HETNAM DP6 (3R)-3-HYDROXY-5-{[(R)-HYDROXY(PHOSPHONOOXY) HETNAM 2 DP6 PHOSPHORYL]OXY}-3-METHYLPENTANOIC ACID HETNAM ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER HETNAM MG MAGNESIUM ION HETSYN ACP ADENOSINE-5'-[BETA, GAMMA-METHYLENE]TRIPHOSPHATE FORMUL 2 DP6 C6 H14 O10 P2 FORMUL 3 ACP C11 H18 N5 O12 P3 FORMUL 4 MG MG 2+ FORMUL 5 HOH *90(H2 O) HELIX 1 AA1 ASN A 65 ASP A 84 1 20 HELIX 2 AA2 SER A 105 LEU A 121 1 17 HELIX 3 AA3 SER A 126 SER A 138 1 13 HELIX 4 AA4 GLY A 139 PHE A 146 5 8 HELIX 5 AA5 ASN A 170 ASN A 173 5 4 HELIX 6 AA6 SER A 190 SER A 202 1 13 HELIX 7 AA7 PHE A 204 LYS A 226 1 23 HELIX 8 AA8 ASP A 227 LEU A 247 1 21 HELIX 9 AA9 SER A 257 LYS A 273 1 17 HELIX 10 AB1 ASN A 295 SER A 304 1 10 HELIX 11 AB2 SER A 308 GLU A 310 5 3 SHEET 1 AA1 6 ILE A 62 LEU A 63 0 SHEET 2 AA1 6 VAL A 56 LEU A 59 -1 N LEU A 59 O ILE A 62 SHEET 3 AA1 6 ALA A 89 PHE A 96 1 O VAL A 91 N ILE A 58 SHEET 4 AA1 6 SER A 32 ASP A 49 -1 N TYR A 41 O PHE A 96 SHEET 5 AA1 6 PHE A 149 ASN A 153 -1 O ALA A 150 N SER A 34 SHEET 6 AA1 6 PHE A 162 ASN A 165 -1 O GLU A 164 N GLN A 151 SHEET 1 AA2 6 ILE A 62 LEU A 63 0 SHEET 2 AA2 6 VAL A 56 LEU A 59 -1 N LEU A 59 O ILE A 62 SHEET 3 AA2 6 ALA A 89 PHE A 96 1 O VAL A 91 N ILE A 58 SHEET 4 AA2 6 SER A 32 ASP A 49 -1 N TYR A 41 O PHE A 96 SHEET 5 AA2 6 MET A 1 ILE A 15 -1 N LEU A 14 O LEU A 33 SHEET 6 AA2 6 GLU A 322 PHE A 324 -1 O PHE A 324 N LYS A 5 SHEET 1 AA3 2 LYS A 20 ASN A 22 0 SHEET 2 AA3 2 LEU A 27 PRO A 28 -1 O LEU A 27 N ALA A 21 SHEET 1 AA4 4 CYS A 277 THR A 280 0 SHEET 2 AA4 4 VAL A 287 GLU A 292 -1 O LEU A 290 N TYR A 278 SHEET 3 AA4 4 LEU A 175 ILE A 180 -1 N LEU A 178 O VAL A 289 SHEET 4 AA4 4 LEU A 312 PHE A 316 -1 O VAL A 313 N PHE A 179 LINK OG SER A 106 MG MG A 403 1555 1555 2.61 LINK O1A DP6 A 401 MG MG A 403 1555 1555 2.29 LINK O2G ACP A 402 MG MG A 403 1555 1555 2.09 LINK O2B ACP A 402 MG MG A 403 1555 1555 2.23 LINK O2A ACP A 402 MG MG A 403 1555 1555 2.80 CISPEP 1 VAL A 250 PRO A 251 0 -5.72 SITE 1 AC1 18 ALA A 13 TYR A 17 LYS A 20 LYS A 71 SITE 2 AC1 18 SER A 106 SER A 138 GLY A 139 SER A 140 SITE 3 AC1 18 ARG A 143 SER A 191 ARG A 192 MET A 195 SITE 4 AC1 18 ASP A 282 ALA A 283 ACP A 402 MG A 403 SITE 5 AC1 18 HOH A 518 HOH A 544 SITE 1 AC2 19 THR A 42 PHE A 57 LEU A 59 GLN A 68 SITE 2 AC2 19 LYS A 71 VAL A 72 SER A 93 ASN A 95 SITE 3 AC2 19 ALA A 104 SER A 105 SER A 106 GLY A 109 SITE 4 AC2 19 SER A 190 SER A 191 ALA A 283 DP6 A 401 SITE 5 AC2 19 MG A 403 HOH A 521 HOH A 532 SITE 1 AC3 3 SER A 106 DP6 A 401 ACP A 402 CRYST1 80.037 97.036 46.018 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012494 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010305 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021731 0.00000