HEADER CELL ADHESION 12-JUL-18 6E31 TITLE CRYSTAL STRUCTURE OF RIAM IN AN AUTOINHIBITED CONFIGURATION. COMPND MOL_ID: 1; COMPND 2 MOLECULE: RAP1-INTERACTING ADAPTER MOLECULE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: APBB1IP, MCG_15166, RP23-114M13.3-001; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS RIAM, RAP1, LPD, ADHESION, RAS-ASSOCIATION DOMAIN, PLECKSTRIN- KEYWDS 2 HOMOLOGY DOMAIN, AUTOINHIBITION, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR Y.C.CHANG,W.SU,H.ZHANG,Q.HUANG,M.R.PHILIPS,J.WU REVDAT 4 11-OCT-23 6E31 1 REMARK REVDAT 3 01-JAN-20 6E31 1 REMARK REVDAT 2 13-MAR-19 6E31 1 JRNL REVDAT 1 20-FEB-19 6E31 0 JRNL AUTH Y.C.CHANG,W.SU,E.A.CHO,H.ZHANG,Q.HUANG,M.R.PHILIPS,J.WU JRNL TITL MOLECULAR BASIS FOR AUTOINHIBITION OF RIAM REGULATED BY FAK JRNL TITL 2 IN INTEGRIN ACTIVATION. JRNL REF PROC. NATL. ACAD. SCI. V. 116 3524 2019 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 30733287 JRNL DOI 10.1073/PNAS.1818880116 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 18730 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 921 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1382 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.95 REMARK 3 BIN R VALUE (WORKING SET) : 0.3560 REMARK 3 BIN FREE R VALUE SET COUNT : 48 REMARK 3 BIN FREE R VALUE : 0.3370 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2412 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 33 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 78.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 9.09000 REMARK 3 B22 (A**2) : -4.76000 REMARK 3 B33 (A**2) : -4.31000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.47000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.272 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.213 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.198 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.723 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2464 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3339 ; 1.073 ; 1.963 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 304 ; 5.955 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 118 ;40.266 ;25.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 419 ;14.934 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;16.847 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 372 ; 0.065 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1870 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1222 ; 2.021 ; 7.182 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1521 ; 3.436 ;10.750 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1242 ; 2.078 ; 6.906 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 10072 ; 7.667 ;64.390 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 25 A 437 REMARK 3 ORIGIN FOR THE GROUP (A): 25.9146 -2.7482 17.7189 REMARK 3 T TENSOR REMARK 3 T11: 0.0181 T22: 0.0901 REMARK 3 T33: 0.0822 T12: -0.0310 REMARK 3 T13: -0.0016 T23: 0.0184 REMARK 3 L TENSOR REMARK 3 L11: 0.1806 L22: 1.8167 REMARK 3 L33: 1.0565 L12: -0.0665 REMARK 3 L13: 0.1115 L23: 0.3537 REMARK 3 S TENSOR REMARK 3 S11: -0.0168 S12: 0.0165 S13: 0.0291 REMARK 3 S21: 0.0112 S22: -0.0884 S23: 0.1576 REMARK 3 S31: 0.0828 S32: -0.0564 S33: 0.1052 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 6E31 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1000235478. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19178 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 32.0500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.040 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3TCA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MAGNESIUM ACETATE, 6% PEG 3350, REMARK 280 PH 8, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 68.24750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.97800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 68.24750 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 41.97800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 24 REMARK 465 ASP A 35 REMARK 465 PRO A 36 REMARK 465 ASN A 37 REMARK 465 PRO A 38 REMARK 465 PRO A 39 REMARK 465 ARG A 40 REMARK 465 GLU A 41 REMARK 465 GLU A 42 REMARK 465 PHE A 43 REMARK 465 ASP A 129 REMARK 465 ILE A 130 REMARK 465 SER A 131 REMARK 465 GLU A 132 REMARK 465 ALA A 133 REMARK 465 GLU A 134 REMARK 465 GLN A 135 REMARK 465 ARG A 136 REMARK 465 THR A 137 REMARK 465 ILE A 138 REMARK 465 GLN A 139 REMARK 465 ALA A 140 REMARK 465 GLN A 141 REMARK 465 LYS A 142 REMARK 465 GLU A 143 REMARK 465 SER A 144 REMARK 465 SER A 145 REMARK 465 GLN A 146 REMARK 465 ASN A 147 REMARK 465 GLN A 148 REMARK 465 PRO A 149 REMARK 465 GLU A 150 REMARK 465 LEU A 151 REMARK 465 LEU A 152 REMARK 465 SER A 153 REMARK 465 LYS A 154 REMARK 465 GLU A 155 REMARK 465 GLU A 156 REMARK 465 ASP A 279 REMARK 465 ASN A 280 REMARK 465 LYS A 281 REMARK 465 GLY A 282 REMARK 465 LYS A 283 REMARK 465 LYS A 284 REMARK 465 GLU A 285 REMARK 465 ASN A 286 REMARK 465 LYS A 287 REMARK 465 GLU A 288 REMARK 465 THR A 289 REMARK 465 ASN A 290 REMARK 465 GLU A 291 REMARK 465 LYS A 292 REMARK 465 MET A 293 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 25 CG ND1 CD2 CE1 NE2 REMARK 470 MET A 26 CG SD CE REMARK 470 LYS A 50 CG CD CE NZ REMARK 470 GLN A 62 CG CD OE1 NE2 REMARK 470 LEU A 71 CG CD1 CD2 REMARK 470 GLU A 157 CG CD OE1 OE2 REMARK 470 LYS A 162 CG CD CE NZ REMARK 470 LYS A 165 CG CD CE NZ REMARK 470 LEU A 170 CG CD1 CD2 REMARK 470 GLU A 171 CG CD OE1 OE2 REMARK 470 LEU A 173 CG CD1 CD2 REMARK 470 LYS A 174 CG CD CE NZ REMARK 470 ARG A 252 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 296 CG CD CE NZ REMARK 470 TYR A 300 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A 304 CG CD OE1 OE2 REMARK 470 GLU A 315 CG CD OE1 OE2 REMARK 470 LYS A 347 CG CD CE NZ REMARK 470 LYS A 349 CG CD CE NZ REMARK 470 THR A 350 OG1 CG2 REMARK 470 LYS A 351 CG CD CE NZ REMARK 470 THR A 352 OG1 CG2 REMARK 470 ARG A 354 CG CD NE CZ NH1 NH2 REMARK 470 MET A 375 CG SD CE REMARK 470 LYS A 394 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 418 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 174 102.84 -163.36 REMARK 500 ALA A 176 -153.06 70.13 REMARK 500 LYS A 177 -161.20 60.46 REMARK 500 SER A 190 -0.69 79.09 REMARK 500 CYS A 216 -179.25 -67.28 REMARK 500 LYS A 328 45.56 -84.59 REMARK 500 LYS A 347 81.95 -162.79 REMARK 500 LYS A 349 46.80 35.17 REMARK 500 LYS A 351 -137.43 51.30 REMARK 500 SER A 353 -115.33 -93.63 REMARK 500 ARG A 354 28.86 -153.19 REMARK 500 REMARK 500 REMARK: NULL DBREF 6E31 A 27 437 UNP B1AYC9 B1AYC9_MOUSE 27 437 SEQADV 6E31 GLY A 24 UNP B1AYC9 EXPRESSION TAG SEQADV 6E31 HIS A 25 UNP B1AYC9 EXPRESSION TAG SEQADV 6E31 MET A 26 UNP B1AYC9 EXPRESSION TAG SEQRES 1 A 359 GLY HIS MET GLY VAL ASP THR LEU PRO PRO PRO ASP PRO SEQRES 2 A 359 ASN PRO PRO ARG GLU GLU PHE ASN TYR THR VAL GLY PHE SEQRES 3 A 359 LYS ASP LEU ASN GLU SER LEU ASN ALA LEU GLU ASP GLN SEQRES 4 A 359 ASP LEU ASP ALA LEU MET ALA ASP LEU VAL ALA ASP ILE SEQRES 5 A 359 SER GLU ALA GLU GLN ARG THR ILE GLN ALA GLN LYS GLU SEQRES 6 A 359 SER SER GLN ASN GLN PRO GLU LEU LEU SER LYS GLU GLU SEQRES 7 A 359 GLU GLU ALA LYS ALA LYS ALA ASP LYS ILE LYS LEU ALA SEQRES 8 A 359 LEU GLU LYS LEU LYS GLU ALA LYS VAL LYS LYS LEU VAL SEQRES 9 A 359 VAL LYS VAL HIS MET ASP ASP SER SER THR LYS SER LEU SEQRES 10 A 359 MET VAL ASP GLU ARG GLN LEU ALA ARG ASP VAL LEU ASP SEQRES 11 A 359 ASN LEU PHE GLU LYS THR HIS CYS ASP CYS ASN VAL ASP SEQRES 12 A 359 TRP CYS LEU TYR GLU ILE TYR PRO GLU LEU GLN ILE GLU SEQRES 13 A 359 ARG VAL PHE GLU ASP HIS GLU ASN VAL VAL GLU VAL LEU SEQRES 14 A 359 SER ASP TRP THR ARG ASP THR GLU ASN LYS VAL LEU PHE SEQRES 15 A 359 LEU GLU LYS GLU GLU ARG TYR ALA VAL PHE LYS ASN PRO SEQRES 16 A 359 GLN ASN PHE TYR LEU ASP ASN LYS GLY LYS LYS GLU ASN SEQRES 17 A 359 LYS GLU THR ASN GLU LYS MET ASN ALA LYS ASN LYS GLU SEQRES 18 A 359 TYR LEU LEU GLU GLU SER PHE CYS GLY THR SER ILE ILE SEQRES 19 A 359 VAL PRO GLU LEU GLU GLY ALA LEU TYR LEU LYS GLU ASP SEQRES 20 A 359 GLY LYS LYS SER TRP LYS ARG ARG TYR PHE LEU LEU ARG SEQRES 21 A 359 ALA SER GLY ILE TYR TYR VAL PRO LYS GLY LYS THR LYS SEQRES 22 A 359 THR SER ARG ASP LEU ALA CYS PHE ILE GLN PHE GLU ASN SEQRES 23 A 359 VAL ASN ILE TYR TYR GLY ILE GLN CYS LYS MET LYS TYR SEQRES 24 A 359 LYS ALA PRO THR ASP HIS CYS PHE VAL LEU LYS HIS PRO SEQRES 25 A 359 GLN ILE GLN LYS GLU SER GLN TYR ILE LYS TYR LEU CYS SEQRES 26 A 359 CYS ASP ASP ALA ARG THR LEU SER GLN TRP VAL MET GLY SEQRES 27 A 359 ILE ARG ILE ALA LYS TYR GLY LYS THR LEU TYR ASP ASN SEQRES 28 A 359 TYR GLN ARG ALA VAL ALA ARG ALA FORMUL 2 HOH *33(H2 O) HELIX 1 AA1 ASP A 51 ALA A 58 1 8 HELIX 2 AA2 GLU A 60 ALA A 73 1 14 HELIX 3 AA3 GLU A 158 LEU A 173 1 16 HELIX 4 AA4 LEU A 202 HIS A 215 1 14 HELIX 5 AA5 ASN A 242 ASP A 249 1 8 HELIX 6 AA6 TYR A 267 ASN A 272 1 6 HELIX 7 AA7 PRO A 273 PHE A 276 5 4 HELIX 8 AA8 ALA A 295 PHE A 306 1 12 HELIX 9 AA9 GLU A 363 VAL A 365 5 3 HELIX 10 AB1 GLN A 372 LYS A 378 1 7 HELIX 11 AB2 ASP A 406 GLY A 423 1 18 HELIX 12 AB3 GLY A 423 ALA A 437 1 15 SHEET 1 AA1 3 THR A 46 VAL A 47 0 SHEET 2 AA1 3 LYS A 180 HIS A 186 1 O VAL A 182 N VAL A 47 SHEET 3 AA1 3 THR A 192 ASP A 198 -1 O LYS A 193 N VAL A 185 SHEET 1 AA212 THR A 46 VAL A 47 0 SHEET 2 AA212 LYS A 180 HIS A 186 1 O VAL A 182 N VAL A 47 SHEET 3 AA212 LYS A 257 GLU A 262 1 O VAL A 258 N HIS A 186 SHEET 4 AA212 TRP A 222 TYR A 228 -1 N TYR A 225 O LEU A 259 SHEET 5 AA212 ILE A 233 VAL A 236 -1 O ILE A 233 N TYR A 228 SHEET 6 AA212 ASN A 366 GLY A 370 -1 O TYR A 369 N GLU A 234 SHEET 7 AA212 CYS A 384 LYS A 388 -1 O VAL A 386 N TYR A 368 SHEET 8 AA212 LYS A 400 CYS A 403 -1 O LEU A 402 N PHE A 385 SHEET 9 AA212 GLU A 317 LYS A 323 -1 N TYR A 321 O CYS A 403 SHEET 10 AA212 TRP A 330 LEU A 337 -1 O PHE A 335 N GLY A 318 SHEET 11 AA212 GLY A 341 TYR A 344 -1 O TYR A 343 N LEU A 336 SHEET 12 AA212 ALA A 357 GLN A 361 -1 O PHE A 359 N ILE A 342 CRYST1 136.495 83.956 45.200 90.00 91.08 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007326 0.000000 0.000137 0.00000 SCALE2 0.000000 0.011911 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022128 0.00000