HEADER HYDROLASE 23-JUL-18 6E5Y TITLE 1.50 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF ARGININOSUCCINATE TITLE 2 SYNTHASE FROM BORDETELLA PERTUSSIS IN COMPLEX WITH AMP. COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARGININOSUCCINATE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CITRULLINE--ASPARTATE LIGASE; COMPND 5 EC: 6.3.4.5; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BORDETELLA PERTUSSIS; SOURCE 3 ORGANISM_TAXID: 257313; SOURCE 4 STRAIN: TOHAMA I / ATCC BAA-589 / NCTC 13251; SOURCE 5 GENE: ARGG, BP3537; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 2 DISEASES, CSGID, ARGININOSUCCINATE SYNTHASE, AMP, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR G.MINASOV,L.SHUVALOVA,I.DUBROVSKA,A.CARDONA-CORREA,S.GRIMSHAW,K.KWON, AUTHOR 2 W.F.ANDERSON,K.J.F.SATCHELL,A.JOACHIMIAK,CENTER FOR STRUCTURAL AUTHOR 3 GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 2 11-OCT-23 6E5Y 1 REMARK REVDAT 1 01-AUG-18 6E5Y 0 JRNL AUTH G.MINASOV,L.SHUVALOVA,I.DUBROVSKA,A.CARDONA-CORREA, JRNL AUTH 2 S.GRIMSHAW,K.KWON,W.F.ANDERSON,K.J.F.SATCHELL,A.JOACHIMIAK, JRNL AUTH 3 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 4 (CSGID) JRNL TITL 1.50 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF JRNL TITL 2 ARGININOSUCCINATE SYNTHASE FROM BORDETELLA PERTUSSIS IN JRNL TITL 3 COMPLEX WITH AMP. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0230 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.59 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 68161 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.179 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3684 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4987 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.2460 REMARK 3 BIN FREE R VALUE SET COUNT : 232 REMARK 3 BIN FREE R VALUE : 0.2670 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3425 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 57 REMARK 3 SOLVENT ATOMS : 496 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.84000 REMARK 3 B22 (A**2) : 0.84000 REMARK 3 B33 (A**2) : -1.68000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.071 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.071 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.054 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.968 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.975 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.968 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4129 ; 0.008 ; 0.014 REMARK 3 BOND LENGTHS OTHERS (A): 3628 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5650 ; 1.341 ; 1.675 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8552 ; 0.450 ; 1.638 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 539 ; 4.380 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 236 ;27.885 ;21.568 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 709 ;10.567 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;14.011 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 531 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4903 ; 0.044 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 772 ; 0.040 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2045 ; 1.350 ; 1.625 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2044 ; 1.349 ; 1.622 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2621 ; 2.097 ; 2.430 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2622 ; 2.097 ; 2.433 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2083 ; 2.163 ; 1.908 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2081 ; 2.147 ; 1.907 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3028 ; 3.286 ; 2.769 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4662 ; 5.198 ;20.299 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4550 ; 5.033 ;19.510 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 164 REMARK 3 ORIGIN FOR THE GROUP (A): 96.3918 -21.6878 27.8370 REMARK 3 T TENSOR REMARK 3 T11: 0.0618 T22: 0.1064 REMARK 3 T33: 0.0937 T12: -0.0240 REMARK 3 T13: 0.0160 T23: 0.0238 REMARK 3 L TENSOR REMARK 3 L11: 0.3458 L22: 0.3626 REMARK 3 L33: 1.6372 L12: 0.3452 REMARK 3 L13: -0.6848 L23: -0.7144 REMARK 3 S TENSOR REMARK 3 S11: 0.0539 S12: -0.1036 S13: -0.0181 REMARK 3 S21: 0.0376 S22: -0.0727 S23: -0.0037 REMARK 3 S31: -0.0283 S32: 0.1146 S33: 0.0188 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 165 A 184 REMARK 3 ORIGIN FOR THE GROUP (A): 109.0399 -27.6644 42.9714 REMARK 3 T TENSOR REMARK 3 T11: 0.0527 T22: 0.3347 REMARK 3 T33: 0.1907 T12: -0.0242 REMARK 3 T13: -0.0634 T23: 0.0844 REMARK 3 L TENSOR REMARK 3 L11: 4.6367 L22: 6.5521 REMARK 3 L33: 5.2913 L12: -0.8654 REMARK 3 L13: -4.0727 L23: 1.0479 REMARK 3 S TENSOR REMARK 3 S11: -0.0850 S12: -0.7764 S13: 0.0043 REMARK 3 S21: 0.0137 S22: 0.1403 S23: -0.6712 REMARK 3 S31: 0.2574 S32: 0.6707 S33: -0.0552 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 185 A 382 REMARK 3 ORIGIN FOR THE GROUP (A): 105.8387 -21.8928 5.3766 REMARK 3 T TENSOR REMARK 3 T11: 0.0209 T22: 0.0043 REMARK 3 T33: 0.0451 T12: 0.0023 REMARK 3 T13: 0.0069 T23: 0.0052 REMARK 3 L TENSOR REMARK 3 L11: 0.2121 L22: 0.3975 REMARK 3 L33: 0.3968 L12: 0.0223 REMARK 3 L13: 0.0158 L23: 0.1204 REMARK 3 S TENSOR REMARK 3 S11: -0.0064 S12: -0.0268 S13: -0.0549 REMARK 3 S21: 0.0577 S22: -0.0088 S23: 0.0026 REMARK 3 S31: 0.0762 S32: 0.0045 S33: 0.0152 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 383 A 394 REMARK 3 ORIGIN FOR THE GROUP (A): 101.0071 -18.2184 -31.7785 REMARK 3 T TENSOR REMARK 3 T11: 0.3901 T22: 0.2396 REMARK 3 T33: 0.1632 T12: 0.0619 REMARK 3 T13: -0.0253 T23: -0.0529 REMARK 3 L TENSOR REMARK 3 L11: 7.2997 L22: 1.8363 REMARK 3 L33: 13.0953 L12: 1.5653 REMARK 3 L13: 5.5941 L23: -2.4267 REMARK 3 S TENSOR REMARK 3 S11: -0.0821 S12: 0.4296 S13: -0.1170 REMARK 3 S21: -0.3593 S22: -0.0329 S23: -0.0838 REMARK 3 S31: 0.6557 S32: 0.6572 S33: 0.1150 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 395 A 442 REMARK 3 ORIGIN FOR THE GROUP (A): 107.4698 10.7010 -19.7008 REMARK 3 T TENSOR REMARK 3 T11: 0.0702 T22: 0.0828 REMARK 3 T33: 0.0757 T12: -0.0393 REMARK 3 T13: 0.0428 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 0.5552 L22: 2.6290 REMARK 3 L33: 2.3696 L12: 0.3248 REMARK 3 L13: 0.4462 L23: 1.0640 REMARK 3 S TENSOR REMARK 3 S11: -0.1052 S12: 0.1386 S13: 0.0416 REMARK 3 S21: -0.2952 S22: 0.1757 S23: -0.1982 REMARK 3 S31: -0.0374 S32: 0.1540 S33: -0.0705 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6E5Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1000235782. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : BE REMARK 200 OPTICS : C(111) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 72217 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : 0.06500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 24.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 0.82600 REMARK 200 R SYM FOR SHELL (I) : 0.82600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5US8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN: 12.0 MG/ML, 0.5M SODIUM REMARK 280 CHLORIDE, 0.01M TRIS HCL (PH 8.3), 0.01MM ATP, 0.1MM MAGNESIUM REMARK 280 CHLORIDE; SCREEN: CLASSICS II (A3), 2M AMMONIUM SULFATE, 0.1 BIS- REMARK 280 TRIS (PH 5.5); CRYO: RESERVOIR + 25% ETHYLENE GLYCOL, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 48.64350 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 48.64350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 46.60000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 48.64350 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 48.64350 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 46.60000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 48.64350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.64350 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 46.60000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 48.64350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.64350 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 46.60000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -219.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 97.28700 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 97.28700 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 42370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 57140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -478.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 194.57400 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 97.28700 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 -97.28700 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 -1.000000 0.000000 97.28700 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 97.28700 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 869 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 951 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1028 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1074 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1088 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 ALA A 433 REMARK 465 GLY A 434 REMARK 465 SER A 435 REMARK 465 GLY A 443 REMARK 465 LYS A 444 REMARK 465 LYS A 445 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 52 82.34 -161.36 REMARK 500 LEU A 166 47.43 -104.38 REMARK 500 ALA A 204 179.74 73.06 REMARK 500 LYS A 205 -126.13 50.12 REMARK 500 ALA A 294 66.03 -167.94 REMARK 500 ARG A 350 -74.38 -88.30 REMARK 500 ARG A 365 -113.81 -118.33 REMARK 500 SER A 377 135.44 -171.17 REMARK 500 ALA A 383 81.18 -164.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1095 DISTANCE = 6.12 ANGSTROMS REMARK 525 HOH A1096 DISTANCE = 6.17 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AMP A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 510 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MLA A 511 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5US8 RELATED DB: PDB REMARK 900 APO STRUCTURE REMARK 900 RELATED ID: CSGID-IDP07200 RELATED DB: TARGETTRACK DBREF 6E5Y A 1 445 UNP Q7VTJ9 ASSY_BORPE 1 445 SEQADV 6E5Y SER A -2 UNP Q7VTJ9 EXPRESSION TAG SEQADV 6E5Y ASN A -1 UNP Q7VTJ9 EXPRESSION TAG SEQADV 6E5Y ALA A 0 UNP Q7VTJ9 EXPRESSION TAG SEQRES 1 A 448 SER ASN ALA MET THR THR ILE LEU PRO ASN LEU PRO THR SEQRES 2 A 448 GLY GLN LYS VAL GLY ILE ALA PHE SER GLY GLY LEU ASP SEQRES 3 A 448 THR SER ALA ALA LEU LEU TRP MET ARG GLN LYS GLY ALA SEQRES 4 A 448 VAL PRO TYR ALA TYR THR ALA ASN LEU GLY GLN PRO ASP SEQRES 5 A 448 GLU PRO ASP TYR ASP GLU ILE PRO ARG ARG ALA MET GLN SEQRES 6 A 448 TYR GLY ALA GLU ALA ALA ARG LEU VAL ASP CYS ARG ALA SEQRES 7 A 448 GLN LEU VAL ALA GLU GLY ILE ALA ALA LEU GLN ALA GLY SEQRES 8 A 448 ALA PHE HIS ILE SER THR ALA GLY LEU THR TYR PHE ASN SEQRES 9 A 448 THR THR PRO ILE GLY ARG ALA VAL THR GLY THR MET LEU SEQRES 10 A 448 VAL ALA ALA MET LYS GLU ASP GLY VAL ASN ILE TRP GLY SEQRES 11 A 448 ASP GLY SER THR PHE LYS GLY ASN ASP ILE GLU ARG PHE SEQRES 12 A 448 TYR ARG TYR GLY LEU LEU THR ASN PRO ASP LEU LYS ILE SEQRES 13 A 448 TYR LYS PRO TRP LEU ASP GLN THR PHE ILE ASP GLU LEU SEQRES 14 A 448 GLY GLY ARG ALA GLU MET SER GLU TYR MET ARG GLN ALA SEQRES 15 A 448 GLY PHE ASP TYR LYS MET SER ALA GLU LYS ALA TYR SER SEQRES 16 A 448 THR ASP SER ASN MET LEU GLY ALA THR HIS GLU ALA LYS SEQRES 17 A 448 ASP LEU GLU LEU LEU SER ALA GLY ILE ARG ILE VAL GLN SEQRES 18 A 448 PRO ILE MET GLY VAL ALA PHE TRP GLN ASP SER VAL GLN SEQRES 19 A 448 ILE LYS ALA GLU GLU VAL THR VAL ARG PHE GLU GLU GLY SEQRES 20 A 448 GLN PRO VAL ALA LEU ASN GLY VAL GLU TYR ALA ASP PRO SEQRES 21 A 448 VAL GLU LEU LEU LEU GLU ALA ASN ARG ILE GLY GLY ARG SEQRES 22 A 448 HIS GLY LEU GLY MET SER ASP GLN ILE GLU ASN ARG ILE SEQRES 23 A 448 ILE GLU ALA LYS SER ARG GLY ILE TYR GLU ALA PRO GLY SEQRES 24 A 448 LEU ALA LEU LEU PHE ILE ALA TYR GLU ARG LEU VAL THR SEQRES 25 A 448 GLY ILE HIS ASN GLU ASP THR ILE GLU GLN TYR ARG GLU SEQRES 26 A 448 ASN GLY ARG LYS LEU GLY ARG LEU LEU TYR GLN GLY ARG SEQRES 27 A 448 TRP PHE ASP PRO GLN ALA ILE MET LEU ARG GLU THR ALA SEQRES 28 A 448 GLN ARG TRP VAL ALA ARG ALA ILE THR GLY GLU VAL THR SEQRES 29 A 448 LEU GLU LEU ARG ARG GLY ASN ASP TYR SER LEU LEU ASN SEQRES 30 A 448 THR GLU SER ALA ASN LEU THR TYR ALA PRO GLU ARG LEU SEQRES 31 A 448 SER MET GLU LYS VAL GLU ASN ALA PRO PHE THR PRO ALA SEQRES 32 A 448 ASP ARG ILE GLY GLN LEU THR MET ARG ASN LEU ASP ILE SEQRES 33 A 448 VAL ASP THR ARG GLU LYS LEU PHE THR TYR VAL LYS THR SEQRES 34 A 448 GLY LEU LEU ALA PRO SER ALA GLY SER ALA LEU PRO GLN SEQRES 35 A 448 ILE LYS ASP GLY LYS LYS HET AMP A 501 23 HET CL A 502 1 HET CL A 503 1 HET CL A 504 1 HET CL A 505 1 HET SO4 A 506 5 HET SO4 A 507 5 HET SO4 A 508 5 HET EDO A 509 4 HET EDO A 510 4 HET MLA A 511 7 HETNAM AMP ADENOSINE MONOPHOSPHATE HETNAM CL CHLORIDE ION HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM MLA MALONIC ACID HETSYN EDO ETHYLENE GLYCOL HETSYN MLA DICARBOXYLIC ACID C3; PROPANEDIOLIC ACID; HETSYN 2 MLA METHANEDICARBOXYLIC ACID FORMUL 2 AMP C10 H14 N5 O7 P FORMUL 3 CL 4(CL 1-) FORMUL 7 SO4 3(O4 S 2-) FORMUL 10 EDO 2(C2 H6 O2) FORMUL 12 MLA C3 H4 O4 FORMUL 13 HOH *496(H2 O) HELIX 1 AA1 GLY A 21 LYS A 34 1 14 HELIX 2 AA2 ASP A 54 GLY A 64 1 11 HELIX 3 AA3 CYS A 73 ALA A 87 1 15 HELIX 4 AA4 ASN A 101 ASP A 121 1 21 HELIX 5 AA5 ASN A 135 ASN A 148 1 14 HELIX 6 AA6 PRO A 156 LEU A 158 5 3 HELIX 7 AA7 ASP A 159 LEU A 166 1 8 HELIX 8 AA8 GLY A 168 ALA A 179 1 12 HELIX 9 AA9 LYS A 205 LEU A 209 5 5 HELIX 10 AB1 GLY A 213 VAL A 217 5 5 HELIX 11 AB2 ASP A 256 ARG A 270 1 15 HELIX 12 AB3 ALA A 294 HIS A 312 1 19 HELIX 13 AB4 ASN A 313 GLN A 333 1 21 HELIX 14 AB5 ASP A 338 VAL A 352 1 15 HELIX 15 AB6 ALA A 353 ILE A 356 5 4 HELIX 16 AB7 ALA A 383 SER A 388 5 6 HELIX 17 AB8 THR A 398 MET A 408 1 11 HELIX 18 AB9 ARG A 409 THR A 426 1 18 SHEET 1 AA1 3 ILE A 4 LEU A 5 0 SHEET 2 AA1 3 LYS A 152 TYR A 154 1 O ILE A 153 N LEU A 5 SHEET 3 AA1 3 ILE A 125 GLY A 127 1 N TRP A 126 O TYR A 154 SHEET 1 AA2 3 LYS A 13 ALA A 17 0 SHEET 2 AA2 3 VAL A 37 ASN A 44 1 O TYR A 39 N ILE A 16 SHEET 3 AA2 3 ALA A 68 ASP A 72 1 O VAL A 71 N ASN A 44 SHEET 1 AA3 2 SER A 93 THR A 94 0 SHEET 2 AA3 2 LEU A 97 THR A 98 -1 O LEU A 97 N THR A 94 SHEET 1 AA4 4 SER A 192 ASN A 196 0 SHEET 2 AA4 4 GLY A 199 GLU A 203 -1 O GLU A 203 N SER A 192 SHEET 3 AA4 4 LYS A 287 GLU A 293 -1 O GLU A 293 N ALA A 200 SHEET 4 AA4 4 SER A 276 ASN A 281 -1 N SER A 276 O TYR A 292 SHEET 1 AA5 5 VAL A 252 GLU A 253 0 SHEET 2 AA5 5 GLN A 245 LEU A 249 -1 N LEU A 249 O VAL A 252 SHEET 3 AA5 5 GLU A 235 GLU A 242 -1 N ARG A 240 O ALA A 248 SHEET 4 AA5 5 GLY A 358 LEU A 364 -1 O LEU A 364 N GLU A 235 SHEET 5 AA5 5 TYR A 370 GLU A 376 -1 O LEU A 373 N THR A 361 SHEET 1 AA6 2 LEU A 429 ALA A 430 0 SHEET 2 AA6 2 GLN A 439 ILE A 440 -1 O GLN A 439 N ALA A 430 SITE 1 AC1 16 ALA A 17 SER A 19 TYR A 41 THR A 42 SITE 2 AC1 16 ALA A 43 GLN A 47 ARG A 107 LEU A 114 SITE 3 AC1 16 ASP A 128 GLY A 129 ASP A 194 SO4 A 507 SITE 4 AC1 16 HOH A 607 HOH A 612 HOH A 868 HOH A1048 SITE 1 AC2 3 ALA A 378 HOH A1009 HOH A1045 SITE 1 AC3 4 GLY A 106 ASN A 196 HOH A 809 HOH A 829 SITE 1 AC4 3 THR A 131 ARG A 282 HOH A1001 SITE 1 AC5 1 ARG A 329 SITE 1 AC6 5 LEU A 22 ARG A 169 TYR A 183 MET A 185 SITE 2 AC6 5 SER A 186 SITE 1 AC7 6 SER A 19 GLY A 21 ASP A 23 THR A 24 SITE 2 AC7 6 AMP A 501 HOH A 897 SITE 1 AC8 4 LYS A 189 SER A 192 THR A 193 HOH A 654 SITE 1 AC9 6 ILE A 16 ASP A 23 ALA A 27 GLY A 127 SITE 2 AC9 6 PRO A 156 TRP A 157 SITE 1 AD1 6 VAL A 71 ASP A 72 HOH A 703 HOH A 728 SITE 2 AD1 6 HOH A 816 HOH A 863 SITE 1 AD2 10 TYR A 99 PRO A 104 ASN A 135 ARG A 139 SITE 2 AD2 10 GLU A 280 TYR A 292 TYR A 332 HOH A 629 SITE 3 AD2 10 HOH A 949 HOH A1007 CRYST1 97.287 97.287 93.200 90.00 90.00 90.00 P 42 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010279 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010279 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010730 0.00000