HEADER DNA BINDING PROTEIN/DNA/RNA 25-JUL-18 6E79 OBSLTE 27-FEB-19 6E79 6NY2 TITLE CASX-GRNA-DNA(45BP) STATE I CAVEAT 6E79 RESIDUES GLN Y 143 AND LEU Y 147 THAT ARE NEXT TO EACH OTHER CAVEAT 2 6E79 IN THE SAMPLE SEQUENCE ARE NOT PROPERLY LINKED: DISTANCE CAVEAT 3 6E79 BETWEEN C AND N IS 8.09. RESIDUES LEU Y 312 AND ASP Y 313 CAVEAT 4 6E79 ARE LINKED TOGETHER IN THE MODEL; HOWEVER, THERE ARE CAVEAT 5 6E79 RESIDUES BETWEEN THEM IN THE DEPOSITED POLYMERIC SEQUENCE. CAVEAT 6 6E79 RESIDUES VAL Y 334 AND ARG Y 335 ARE LINKED TOGETHER IN THE CAVEAT 7 6E79 MODEL; HOWEVER, THERE ARE RESIDUES BETWEEN THEM IN THE CAVEAT 8 6E79 DEPOSITED POLYMERIC SEQUENCE. RESIDUES THR Y 831 AND TYR Y CAVEAT 9 6E79 835 ARE LINKED TOGETHER IN THE MODEL; HOWEVER, THERE ARE CAVEAT 10 6E79 RESIDUES BETWEEN THEM IN THE DEPOSITED POLYMERIC SEQUENCE. CAVEAT 11 6E79 RESIDUES DA C 0 AND DT C 1 THAT ARE NEXT TO EACH OTHER IN CAVEAT 12 6E79 THE SAMPLE SEQUENCE ARE NOT PROPERLY LINKED: DISTANCE CAVEAT 13 6E79 BETWEEN O3' AND P IS 0.89. RESIDUES DC D 24 AND DC D 25 CAVEAT 14 6E79 THAT ARE NEXT TO EACH OTHER IN THE SAMPLE SEQUENCE ARE NOT CAVEAT 15 6E79 PROPERLY LINKED: DISTANCE BETWEEN O3' AND P IS 0.91. CAVEAT 16 6E79 RESIDUES DC D 25 AND DG D 26 THAT ARE NEXT TO EACH OTHER IN CAVEAT 17 6E79 THE SAMPLE SEQUENCE ARE NOT PROPERLY LINKED: DISTANCE CAVEAT 18 6E79 BETWEEN O3' AND P IS 1.30. RESIDUES DC D 28 AND DC D 29 CAVEAT 19 6E79 THAT ARE NEXT TO EACH OTHER IN THE SAMPLE SEQUENCE ARE NOT CAVEAT 20 6E79 PROPERLY LINKED: DISTANCE BETWEEN O3' AND P IS 1.24. CAVEAT 21 6E79 RESIDUES DC D 30 AND DG D 31 THAT ARE NEXT TO EACH OTHER IN CAVEAT 22 6E79 THE SAMPLE SEQUENCE ARE NOT PROPERLY LINKED: DISTANCE CAVEAT 23 6E79 BETWEEN O3' AND P IS 0.49. RESIDUES DT D 32 AND DA D 33 CAVEAT 24 6E79 THAT ARE NEXT TO EACH OTHER IN THE SAMPLE SEQUENCE ARE NOT CAVEAT 25 6E79 PROPERLY LINKED: DISTANCE BETWEEN O3' AND P IS 0.97. CAVEAT 26 6E79 RESIDUES DA D 33 AND DT D 34 THAT ARE NEXT TO EACH OTHER IN CAVEAT 27 6E79 THE SAMPLE SEQUENCE ARE NOT PROPERLY LINKED: DISTANCE CAVEAT 28 6E79 BETWEEN O3' AND P IS 1.33. RESIDUES U B 16 AND C B 19 THAT CAVEAT 29 6E79 ARE NEXT TO EACH OTHER IN THE SAMPLE SEQUENCE ARE NOT CAVEAT 30 6E79 PROPERLY LINKED: DISTANCE BETWEEN O3' AND P IS 14.18. CAVEAT 31 6E79 RESIDUES A B 42 AND U B 43 THAT ARE NEXT TO EACH OTHER IN CAVEAT 32 6E79 THE SAMPLE SEQUENCE ARE NOT PROPERLY LINKED: DISTANCE CAVEAT 33 6E79 BETWEEN O3' AND P IS 2.59. RESIDUES U B 43 AND G B 44 THAT CAVEAT 34 6E79 ARE NEXT TO EACH OTHER IN THE SAMPLE SEQUENCE ARE NOT CAVEAT 35 6E79 PROPERLY LINKED: DISTANCE BETWEEN O3' AND P IS 2.92. CAVEAT 36 6E79 RESIDUES G B 72 AND C B 80 THAT ARE NEXT TO EACH OTHER IN CAVEAT 37 6E79 THE SAMPLE SEQUENCE ARE NOT PROPERLY LINKED: DISTANCE CAVEAT 38 6E79 BETWEEN O3' AND P IS 18.57. RESIDUES A B 121 AND A B 122 CAVEAT 39 6E79 THAT ARE NEXT TO EACH OTHER IN THE SAMPLE SEQUENCE ARE NOT CAVEAT 40 6E79 PROPERLY LINKED: DISTANCE BETWEEN O3' AND P IS 1.31. COMPND MOL_ID: 1; COMPND 2 MOLECULE: CASX; COMPND 3 CHAIN: Y; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA (35-MER); COMPND 7 CHAIN: C; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: DNA (35-MER); COMPND 11 CHAIN: D; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: RNA (112-MER); COMPND 15 CHAIN: B; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DELTAPROTEOBACTERIA BACTERIUM SOURCE 3 RIFCSPLOWO2_12_FULL_43_16; SOURCE 4 ORGANISM_TAXID: 1797889; SOURCE 5 GENE: A3G39_04675; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: DELTAPROTEOBACTERIA; SOURCE 10 ORGANISM_TAXID: 28221; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: DELTAPROTEOBACTERIA; SOURCE 15 ORGANISM_TAXID: 28221; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 MOL_ID: 4; SOURCE 19 ORGANISM_SCIENTIFIC: DELTAPROTEOBACTERIA; SOURCE 20 ORGANISM_TAXID: 28221; SOURCE 21 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CASX, SGRNA, TARGET DNA, CRISPR, RNA BINDING PROTEIN, DNA BINDING KEYWDS 2 PROTEIN, DNA BINDING PROTEIN-DNA-RNA COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR J.J.LIU,N.ORLOVA,E.NOGALES,J.A.DOUDNA REVDAT 3 27-FEB-19 6E79 1 OBSLTE JRNL REVDAT 2 20-FEB-19 6E79 1 JRNL REVDAT 1 06-FEB-19 6E79 0 JRNL AUTH J.J.LIU,N.ORLOVA,B.L.OAKES,E.MA,H.B.SPINNER,K.L.M.BANEY, JRNL AUTH 2 J.CHUCK,D.TAN,G.J.KNOTT,L.B.HARRINGTON,B.AL-SHAYEB,A.WAGNER, JRNL AUTH 3 J.BROTZMANN,B.T.STAAHL,K.L.TAYLOR,J.DESMARAIS,E.NOGALES, JRNL AUTH 4 J.A.DOUDNA JRNL TITL CASX ENZYMES COMPRISE A DISTINCT FAMILY OF RNA-GUIDED GENOME JRNL TITL 2 EDITORS. JRNL REF NATURE V. 566 218 2019 JRNL REFN ESSN 1476-4687 JRNL PMID 30718774 JRNL DOI 10.1038/S41586-019-0908-X REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.200 REMARK 3 NUMBER OF PARTICLES : 149361 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6E79 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1000235844. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : CASX-GRNA-DNA(45BP) STATE I REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : UNSPECIFIED REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 46.00 REMARK 245 ILLUMINATION MODE : SPOT SCAN REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: Y, C, D, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET Y 1 REMARK 465 ASN Y 119A REMARK 465 LEU Y 119B REMARK 465 THR Y 119C REMARK 465 THR Y 119D REMARK 465 ALA Y 119E REMARK 465 GLY Y 119F REMARK 465 PHE Y 119G REMARK 465 ALA Y 119H REMARK 465 CYS Y 119I REMARK 465 SER Y 119J REMARK 465 GLN Y 119K REMARK 465 CYS Y 119L REMARK 465 GLY Y 119M REMARK 465 GLN Y 119N REMARK 465 PRO Y 119O REMARK 465 LEU Y 119P REMARK 465 PHE Y 119Q REMARK 465 VAL Y 119R REMARK 465 TYR Y 119S REMARK 465 LYS Y 119T REMARK 465 LEU Y 119U REMARK 465 GLU Y 119V REMARK 465 GLN Y 119W REMARK 465 VAL Y 119X REMARK 465 SER Y 119Y REMARK 465 GLU Y 119Z REMARK 465 LYS Y 120A REMARK 465 GLY Y 120B REMARK 465 LYS Y 120C REMARK 465 ALA Y 120D REMARK 465 LEU Y 267 REMARK 465 ALA Y 268 REMARK 465 GLY Y 269 REMARK 465 LYS Y 270 REMARK 465 GLU Y 271 REMARK 465 LYS Y 312A REMARK 465 LEU Y 312B REMARK 465 SER Y 312C REMARK 465 ARG Y 312D REMARK 465 GLU Y 334A REMARK 465 VAL Y 368 REMARK 465 THR Y 369 REMARK 465 ALA Y 370 REMARK 465 GLU Y 393 REMARK 465 GLY Y 394 REMARK 465 SER Y 395 REMARK 465 LEU Y 396 REMARK 465 ALA Y 419 REMARK 465 GLY Y 420 REMARK 465 ASP Y 421 REMARK 465 LEU Y 691 REMARK 465 PRO Y 692 REMARK 465 GLU Y 693 REMARK 465 PHE Y 694 REMARK 465 LYS Y 695 REMARK 465 ASP Y 696 REMARK 465 SER Y 697 REMARK 465 SER Y 698 REMARK 465 GLY Y 699 REMARK 465 GLY Y 700 REMARK 465 PRO Y 701 REMARK 465 THR Y 702 REMARK 465 ASP Y 703 REMARK 465 ILE Y 704 REMARK 465 THR Y 832 REMARK 465 ALA Y 833 REMARK 465 ASP Y 834 REMARK 465 LEU Y 879 REMARK 465 SER Y 880 REMARK 465 ALA Y 881 REMARK 465 GLU Y 882 REMARK 465 LEU Y 883 REMARK 465 ASP Y 884 REMARK 465 ARG Y 885 REMARK 465 LEU Y 886 REMARK 465 SER Y 887 REMARK 465 GLU Y 888 REMARK 465 GLU Y 889 REMARK 465 SER Y 890 REMARK 465 GLY Y 891 REMARK 465 ASN Y 892 REMARK 465 ASN Y 893 REMARK 465 ASP Y 894 REMARK 465 ILE Y 895 REMARK 465 PRO Y 984 REMARK 465 ASN Y 985 REMARK 465 ALA Y 986 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS Y 104 CG CD CE NZ REMARK 470 LYS Y 105 CG CD CE NZ REMARK 470 ILE Y 106 CG1 CG2 CD1 REMARK 470 ASP Y 107 CG OD1 OD2 REMARK 470 GLN Y 108 CG CD OE1 NE2 REMARK 470 ASN Y 109 CG OD1 ND2 REMARK 470 LYS Y 110 CG CD CE NZ REMARK 470 LEU Y 111 CG CD1 CD2 REMARK 470 LYS Y 112 CG CD CE NZ REMARK 470 PRO Y 113 CG CD REMARK 470 GLU Y 114 CG CD OE1 OE2 REMARK 470 MET Y 115 CG SD CE REMARK 470 ASP Y 116 CG OD1 OD2 REMARK 470 GLU Y 117 CG CD OE1 OE2 REMARK 470 LYS Y 118 CG CD CE NZ REMARK 470 TYR Y 123 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 THR Y 124 OG1 CG2 REMARK 470 ASN Y 125 CG OD1 ND2 REMARK 470 TYR Y 126 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 PHE Y 127 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG Y 129 CG CD NE CZ NH1 NH2 REMARK 470 CYS Y 130 SG REMARK 470 ASN Y 131 CG OD1 ND2 REMARK 470 VAL Y 132 CG1 CG2 REMARK 470 GLU Y 134 CG CD OE1 OE2 REMARK 470 HIS Y 135 CG ND1 CD2 CE1 NE2 REMARK 470 GLU Y 136 CG CD OE1 OE2 REMARK 470 LYS Y 137 CG CD CE NZ REMARK 470 LEU Y 138 CG CD1 CD2 REMARK 470 ILE Y 139 CG1 CG2 CD1 REMARK 470 LEU Y 140 CG CD1 CD2 REMARK 470 LEU Y 141 CG CD1 CD2 REMARK 470 GLN Y 143 CG CD OE1 NE2 REMARK 470 LEU Y 147 CG CD1 CD2 REMARK 470 LYS Y 148 CG CD CE NZ REMARK 470 PRO Y 149 CG CD REMARK 470 GLU Y 150 CG CD OE1 OE2 REMARK 470 LYS Y 151 CG CD CE NZ REMARK 470 ASP Y 152 CG OD1 OD2 REMARK 470 SER Y 153 OG REMARK 470 ASP Y 154 CG OD1 OD2 REMARK 470 GLU Y 155 CG CD OE1 OE2 REMARK 470 VAL Y 157 CG1 CG2 REMARK 470 THR Y 158 OG1 CG2 REMARK 470 TYR Y 159 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER Y 160 OG REMARK 470 LEU Y 161 CG CD1 CD2 REMARK 470 LYS Y 163 CG CD CE NZ REMARK 470 PHE Y 164 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN Y 166 CG CD OE1 NE2 REMARK 470 ARG Y 167 CG CD NE CZ NH1 NH2 REMARK 470 ASP Y 194 CG OD1 OD2 REMARK 470 SER Y 197 OG REMARK 470 HIS Y 199 CG ND1 CD2 CE1 NE2 REMARK 470 ASN Y 272 CG OD1 ND2 REMARK 470 LEU Y 273 CG CD1 CD2 REMARK 470 GLU Y 274 CG CD OE1 OE2 REMARK 470 TYR Y 275 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 PRO Y 276 CG CD REMARK 470 SER Y 277 OG REMARK 470 VAL Y 278 CG1 CG2 REMARK 470 GLN Y 310 CG CD OE1 NE2 REMARK 470 ASP Y 313 CG OD1 OD2 REMARK 470 ASP Y 314 CG OD1 OD2 REMARK 470 LYS Y 316 CG CD CE NZ REMARK 470 PRO Y 317 CG CD REMARK 470 ARG Y 335 CG CD NE CZ NH1 NH2 REMARK 470 GLU Y 340 CG CD OE1 OE2 REMARK 470 ARG Y 373 CG CD NE CZ NH1 NH2 REMARK 470 HIS Y 389 CG ND1 CD2 CE1 NE2 REMARK 470 LYS Y 390 CG CD CE NZ REMARK 470 LYS Y 391 CG CD CE NZ REMARK 470 ARG Y 392 CG CD NE CZ NH1 NH2 REMARK 470 GLU Y 397 CG CD OE1 OE2 REMARK 470 LYS Y 424 CG CD CE NZ REMARK 470 ASP Y 427 CG OD1 OD2 REMARK 470 GLU Y 428 CB CG CD OE1 OE2 REMARK 470 GLU Y 453 CG CD OE1 OE2 REMARK 470 ASP Y 454 CG OD1 OD2 REMARK 470 LEU Y 465 CG CD1 CD2 REMARK 470 SER Y 470 OG REMARK 470 LYS Y 477 CG CD CE NZ REMARK 470 GLU Y 478 CG CD OE1 OE2 REMARK 470 MET Y 479 CG SD CE REMARK 470 ASP Y 480 CG OD1 OD2 REMARK 470 GLU Y 481 CG CD OE1 OE2 REMARK 470 GLU Y 506 CG CD OE1 OE2 REMARK 470 GLU Y 508 CG CD OE1 OE2 REMARK 470 ASP Y 522 CG OD1 OD2 REMARK 470 LYS Y 535 CG CD CE NZ REMARK 470 GLU Y 538 CG CD OE1 OE2 REMARK 470 GLU Y 543 CG CD OE1 OE2 REMARK 470 THR Y 562 OG1 CG2 REMARK 470 ASP Y 563 CG OD1 OD2 REMARK 470 ILE Y 564 CG1 CG2 CD1 REMARK 470 LYS Y 566 CG CD CE NZ REMARK 470 LYS Y 569 CG CD CE NZ REMARK 470 LYS Y 579 CG CD CE NZ REMARK 470 ASP Y 584 CG OD1 OD2 REMARK 470 ASP Y 588 CG OD1 OD2 REMARK 470 GLU Y 592 CG CD OE1 OE2 REMARK 470 GLN Y 593 CG CD OE1 NE2 REMARK 470 GLU Y 608 CG CD OE1 OE2 REMARK 470 ASN Y 612 CG OD1 ND2 REMARK 470 ASP Y 613 CG OD1 OD2 REMARK 470 GLU Y 618 CG CD OE1 OE2 REMARK 470 GLU Y 631 CG CD OE1 OE2 REMARK 470 ARG Y 641 CG CD NE CZ NH1 NH2 REMARK 470 ASP Y 642 CG OD1 OD2 REMARK 470 GLU Y 643 CG CD OE1 OE2 REMARK 470 GLU Y 653 CG CD OE1 OE2 REMARK 470 GLU Y 656 CG CD OE1 OE2 REMARK 470 ASP Y 659 CG OD1 OD2 REMARK 470 LYS Y 664 CG CD CE NZ REMARK 470 ASN Y 667 CG OD1 ND2 REMARK 470 GLU Y 675 CG CD OE1 OE2 REMARK 470 ASN Y 676 CG OD1 ND2 REMARK 470 ASP Y 685 CG OD1 OD2 REMARK 470 GLU Y 687 CG CD OE1 OE2 REMARK 470 GLU Y 709 CG CD OE1 OE2 REMARK 470 GLU Y 713 CG CD OE1 OE2 REMARK 470 GLU Y 723 CG CD OE1 OE2 REMARK 470 GLU Y 725 CG CD OE1 OE2 REMARK 470 ASP Y 745 CG OD1 OD2 REMARK 470 ASP Y 746 CG OD1 OD2 REMARK 470 ASP Y 754 CG OD1 OD2 REMARK 470 GLU Y 803 CG CD OE1 OE2 REMARK 470 LYS Y 808 CG CD CE NZ REMARK 470 ASP Y 836 CG OD1 OD2 REMARK 470 ARG Y 841 CG CD NE CZ NH1 NH2 REMARK 470 LEU Y 842 CG CD1 CD2 REMARK 470 LYS Y 843 CG CD CE NZ REMARK 470 LYS Y 844 CG CD CE NZ REMARK 470 THR Y 845 OG1 CG2 REMARK 470 SER Y 846 OG REMARK 470 ASP Y 847 CG OD1 OD2 REMARK 470 TRP Y 849 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP Y 849 CZ3 CH2 REMARK 470 THR Y 851 OG1 CG2 REMARK 470 THR Y 852 OG1 CG2 REMARK 470 LEU Y 853 CG CD1 CD2 REMARK 470 ASN Y 854 CG OD1 ND2 REMARK 470 ASN Y 855 CG OD1 ND2 REMARK 470 LYS Y 856 CG CD CE NZ REMARK 470 GLU Y 857 CG CD OE1 OE2 REMARK 470 LEU Y 858 CG CD1 CD2 REMARK 470 LYS Y 859 CG CD CE NZ REMARK 470 GLU Y 861 CG CD OE1 OE2 REMARK 470 GLN Y 863 CG CD OE1 NE2 REMARK 470 ILE Y 864 CG1 CG2 CD1 REMARK 470 THR Y 865 OG1 CG2 REMARK 470 TYR Y 866 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 TYR Y 867 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASN Y 868 CG OD1 ND2 REMARK 470 ARG Y 869 CG CD NE CZ NH1 NH2 REMARK 470 TYR Y 870 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS Y 871 CG CD CE NZ REMARK 470 ARG Y 872 CG CD NE CZ NH1 NH2 REMARK 470 GLN Y 873 CG CD OE1 NE2 REMARK 470 THR Y 874 OG1 CG2 REMARK 470 VAL Y 875 CG1 CG2 REMARK 470 GLU Y 876 CG CD OE1 OE2 REMARK 470 LYS Y 877 CG CD CE NZ REMARK 470 GLU Y 878 CG CD OE1 OE2 REMARK 470 SER Y 896 OG REMARK 470 LYS Y 897 CG CD CE NZ REMARK 470 TRP Y 898 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP Y 898 CZ3 CH2 REMARK 470 THR Y 899 OG1 CG2 REMARK 470 LYS Y 900 CG CD CE NZ REMARK 470 ARG Y 902 CG CD NE CZ NH1 NH2 REMARK 470 ARG Y 903 CG CD NE CZ NH1 NH2 REMARK 470 ASP Y 904 CG OD1 OD2 REMARK 470 GLU Y 905 CG CD OE1 OE2 REMARK 470 LEU Y 907 CG CD1 CD2 REMARK 470 PHE Y 908 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU Y 909 CG CD1 CD2 REMARK 470 LEU Y 910 CG CD1 CD2 REMARK 470 LYS Y 911 CG CD CE NZ REMARK 470 LYS Y 912 CG CD CE NZ REMARK 470 GLU Y 921 CG CD OE1 OE2 REMARK 470 ASP Y 927 CG OD1 OD2 REMARK 470 GLU Y 936 CG CD OE1 OE2 REMARK 470 SER Y 951 OG REMARK 470 LEU Y 978 CG CD1 CD2 REMARK 470 GLU Y 980 CG CD OE1 OE2 REMARK 470 VAL Y 981 CG1 CG2 REMARK 470 LYS Y 983 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN Y 817 OP1 DC D 19 0.67 REMARK 500 NH1 ARG Y 604 N7 A B 101 0.85 REMARK 500 O2' U B 43 OP1 G B 44 0.92 REMARK 500 CZ3 TRP Y 611 O2 C B 14 0.94 REMARK 500 CD GLN Y 817 OP1 DC D 19 1.00 REMARK 500 NE2 GLN Y 817 P DC D 19 1.00 REMARK 500 O2' U B 43 P G B 44 1.10 REMARK 500 O3' U B 43 O4' G B 44 1.21 REMARK 500 O4 U B 20 N7 A B 101 1.25 REMARK 500 C2' DA D 27 C5' DC D 28 1.28 REMARK 500 O2' A B 42 OP1 U B 43 1.34 REMARK 500 NH1 ARG Y 604 O4 U B 20 1.43 REMARK 500 C3' DG D 31 OP2 DT D 32 1.44 REMARK 500 CG PHE Y 558 CD1 ILE Y 583 1.46 REMARK 500 C2' A B 42 P U B 43 1.47 REMARK 500 C3' DC D 30 OP1 DG D 31 1.52 REMARK 500 O3' DG D 31 C5' DT D 32 1.55 REMARK 500 CD1 PHE Y 558 CD1 ILE Y 583 1.56 REMARK 500 C3' DG D 31 O5' DT D 32 1.57 REMARK 500 CE3 TRP Y 611 O2 C B 14 1.59 REMARK 500 NH1 ARG Y 604 C5 A B 101 1.59 REMARK 500 C2' U B 43 P G B 44 1.60 REMARK 500 C4' DG D 31 P DT D 32 1.60 REMARK 500 C2' A B 42 OP1 U B 43 1.62 REMARK 500 O2 U B 103 C8 G B 104 1.65 REMARK 500 CG1 VAL Y 666 CD PRO Y 686 1.66 REMARK 500 C2' A B 121 C8 A B 122 1.66 REMARK 500 CG1 VAL Y 666 CG PRO Y 686 1.68 REMARK 500 C3' A B 121 OP2 A B 122 1.72 REMARK 500 NH1 ARG Y 604 C8 A B 101 1.75 REMARK 500 C5 DC D 28 N4 DC D 29 1.76 REMARK 500 O4' U B 43 N3 G B 44 1.77 REMARK 500 C5 DC D 28 C4 DC D 29 1.77 REMARK 500 O3' DC D 25 C5' DG D 26 1.79 REMARK 500 O GLY Y 606 NE1 TRP Y 611 1.86 REMARK 500 CB GLN Y 166 OE1 GLN Y 244 1.86 REMARK 500 CB GLN Y 166 NE2 GLN Y 244 1.86 REMARK 500 NE2 GLN Y 817 O3' DG D 18 1.88 REMARK 500 N3 DT C 2 N1 A B 121 1.88 REMARK 500 CG GLN Y 817 OP1 DC D 19 1.88 REMARK 500 C GLY Y 606 NE1 TRP Y 611 1.88 REMARK 500 N3 DT C 1 N6 A B 122 1.89 REMARK 500 CD2 PHE Y 558 CD1 ILE Y 583 1.90 REMARK 500 O GLY Y 606 CD1 TRP Y 611 1.92 REMARK 500 O GLU Y 150 CB ARG Y 167 1.92 REMARK 500 CE1 PHE Y 195 C5' DC C 19 1.95 REMARK 500 OD2 ASP Y 230 C7 DT C 21 1.97 REMARK 500 O4 U B 21 N7 A B 99 1.98 REMARK 500 CG2 VAL Y 350 CE3 TRP Y 494 1.98 REMARK 500 O4 U B 20 C5 A B 101 1.98 REMARK 500 REMARK 500 THIS ENTRY HAS 78 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DA C 0 O3' DT C 1 P -0.713 REMARK 500 DG C 6 O3' DG C 6 C3' -0.045 REMARK 500 DG C 8 O3' DG C 8 C3' -0.040 REMARK 500 DG C 8 C5 DG C 8 N7 -0.040 REMARK 500 DG C 8 N9 DG C 8 C4 -0.059 REMARK 500 DC C 9 O3' DC C 9 C3' -0.060 REMARK 500 DA C 10 O3' DA C 10 C3' -0.049 REMARK 500 DA C 10 C5 DA C 10 N7 -0.041 REMARK 500 DC C 12 O3' DC C 12 C3' -0.068 REMARK 500 DA C 14 O3' DA C 14 C3' -0.048 REMARK 500 DA C 14 N3 DA C 14 C4 -0.041 REMARK 500 DA C 14 C5 DA C 14 N7 -0.041 REMARK 500 DA C 14 N9 DA C 14 C4 -0.036 REMARK 500 DT C 17 N1 DT C 17 C2 -0.048 REMARK 500 DT C 17 N3 DT C 17 C4 -0.049 REMARK 500 DT C 18 O3' DT C 18 C3' -0.055 REMARK 500 DC C 20 O3' DC C 20 C3' -0.080 REMARK 500 DT C 21 O3' DT C 21 C3' -0.050 REMARK 500 DG C 22 O3' DG C 22 C3' -0.061 REMARK 500 DA C 25 O3' DA C 25 C3' -0.050 REMARK 500 DG D 4 O3' DG D 4 C3' -0.037 REMARK 500 DT D 6 O3' DT D 6 C3' -0.063 REMARK 500 DC D 24 O3' DC D 25 P -0.702 REMARK 500 DC D 25 O3' DG D 26 P -0.312 REMARK 500 DC D 28 O3' DC D 29 P -0.366 REMARK 500 DC D 29 O3' DC D 30 P -0.103 REMARK 500 DC D 30 O3' DG D 31 P -1.119 REMARK 500 DG D 31 O3' DT D 32 P -0.147 REMARK 500 DT D 32 O3' DA D 33 P -0.633 REMARK 500 DA D 33 O3' DT D 34 P -0.278 REMARK 500 A B 10 N9 A B 10 C4 -0.049 REMARK 500 U B 21 O3' U B 22 P 0.100 REMARK 500 A B 101 O3' G B 102 P -0.159 REMARK 500 G B 107 N9 G B 107 C4 -0.053 REMARK 500 A B 112 N9 A B 112 C4 -0.046 REMARK 500 G B 113 C5 G B 113 N7 -0.037 REMARK 500 A B 115 C5 A B 115 N7 -0.036 REMARK 500 A B 117 C5 A B 117 N7 -0.039 REMARK 500 A B 121 O3' A B 122 P -0.301 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO Y 113 N - CA - CB ANGL. DEV. = 7.4 DEGREES REMARK 500 LYS Y 202 C - N - CA ANGL. DEV. = 15.3 DEGREES REMARK 500 THR Y 205 CB - CA - C ANGL. DEV. = -20.4 DEGREES REMARK 500 THR Y 205 N - CA - CB ANGL. DEV. = 12.8 DEGREES REMARK 500 PRO Y 317 N - CA - CB ANGL. DEV. = 7.8 DEGREES REMARK 500 DA C 0 C3' - O3' - P ANGL. DEV. = 15.6 DEGREES REMARK 500 DT C 1 O3' - P - O5' ANGL. DEV. = 25.5 DEGREES REMARK 500 DT C 1 O3' - P - OP1 ANGL. DEV. = -35.1 DEGREES REMARK 500 DC C 19 O4' - C4' - C3' ANGL. DEV. = -2.7 DEGREES REMARK 500 DC C 19 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 DT C 21 C1' - O4' - C4' ANGL. DEV. = -6.5 DEGREES REMARK 500 DT C 21 O4' - C1' - N1 ANGL. DEV. = 3.9 DEGREES REMARK 500 DC D 1 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC D 24 C3' - O3' - P ANGL. DEV. = -37.9 DEGREES REMARK 500 DC D 25 O3' - P - OP2 ANGL. DEV. = 42.6 DEGREES REMARK 500 DC D 25 O3' - P - OP1 ANGL. DEV. = -53.7 DEGREES REMARK 500 DC D 25 C3' - O3' - P ANGL. DEV. = -33.5 DEGREES REMARK 500 DG D 26 O3' - P - O5' ANGL. DEV. = -38.0 DEGREES REMARK 500 DG D 26 O3' - P - OP2 ANGL. DEV. = 25.9 DEGREES REMARK 500 DG D 26 C3' - O3' - P ANGL. DEV. = -25.2 DEGREES REMARK 500 DA D 27 O3' - P - O5' ANGL. DEV. = -42.4 DEGREES REMARK 500 DA D 27 O3' - P - OP1 ANGL. DEV. = 23.6 DEGREES REMARK 500 DC D 28 C3' - O3' - P ANGL. DEV. = -28.6 DEGREES REMARK 500 DC D 29 O3' - P - O5' ANGL. DEV. = -43.2 DEGREES REMARK 500 DC D 29 O3' - P - OP1 ANGL. DEV. = 20.0 DEGREES REMARK 500 DC D 29 C3' - O3' - P ANGL. DEV. = -29.9 DEGREES REMARK 500 DC D 30 O3' - P - O5' ANGL. DEV. = -28.8 DEGREES REMARK 500 DC D 30 O3' - P - OP2 ANGL. DEV. = -35.6 DEGREES REMARK 500 DC D 30 O3' - P - OP1 ANGL. DEV. = 55.3 DEGREES REMARK 500 DC D 30 C3' - O3' - P ANGL. DEV. = -88.8 DEGREES REMARK 500 DG D 31 O3' - P - O5' ANGL. DEV. = -89.7 DEGREES REMARK 500 DG D 31 O3' - P - OP2 ANGL. DEV. = 7.8 DEGREES REMARK 500 DG D 31 C3' - O3' - P ANGL. DEV. = -91.2 DEGREES REMARK 500 DT D 32 O3' - P - O5' ANGL. DEV. = 100.0 DEGREES REMARK 500 DT D 32 C3' - O3' - P ANGL. DEV. = -47.2 DEGREES REMARK 500 DA D 33 O3' - P - O5' ANGL. DEV. = -37.7 DEGREES REMARK 500 DA D 33 O3' - P - OP2 ANGL. DEV. = 37.1 DEGREES REMARK 500 DA D 33 O3' - P - OP1 ANGL. DEV. = -14.3 DEGREES REMARK 500 DA D 33 C3' - O3' - P ANGL. DEV. = 27.6 DEGREES REMARK 500 DT D 34 O3' - P - O5' ANGL. DEV. = 16.1 DEGREES REMARK 500 DT D 34 O3' - P - OP2 ANGL. DEV. = -33.8 DEGREES REMARK 500 DT D 34 O3' - P - OP1 ANGL. DEV. = 12.2 DEGREES REMARK 500 C B 3 N3 - C4 - C5 ANGL. DEV. = 3.1 DEGREES REMARK 500 C B 3 C5 - C4 - N4 ANGL. DEV. = -4.5 DEGREES REMARK 500 C B 3 C6 - N1 - C1' ANGL. DEV. = -7.2 DEGREES REMARK 500 C B 3 C2 - N1 - C1' ANGL. DEV. = 6.7 DEGREES REMARK 500 U B 8 C5 - C6 - N1 ANGL. DEV. = -3.4 DEGREES REMARK 500 U B 8 C3' - O3' - P ANGL. DEV. = 7.8 DEGREES REMARK 500 U B 9 O3' - P - OP1 ANGL. DEV. = 7.4 DEGREES REMARK 500 U B 9 C5 - C6 - N1 ANGL. DEV. = -4.4 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 94 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG Y 4 -92.42 -88.87 REMARK 500 ILE Y 5 -140.49 -151.80 REMARK 500 ASN Y 6 -23.80 -15.35 REMARK 500 SER Y 22 -65.17 -91.58 REMARK 500 SER Y 24 -169.01 -117.34 REMARK 500 THR Y 36 -78.28 -80.54 REMARK 500 ASP Y 37 -42.20 -137.42 REMARK 500 GLU Y 44 44.61 -91.55 REMARK 500 PRO Y 54 -75.10 -64.78 REMARK 500 ASN Y 59 -12.63 65.94 REMARK 500 ALA Y 99 -75.12 -63.99 REMARK 500 GLN Y 100 146.97 146.48 REMARK 500 SER Y 103 -159.29 89.72 REMARK 500 LYS Y 105 -71.67 -112.68 REMARK 500 GLU Y 117 -174.24 -174.66 REMARK 500 ASN Y 125 84.54 -67.89 REMARK 500 TYR Y 126 -165.93 -79.03 REMARK 500 GLU Y 136 -163.67 -129.90 REMARK 500 SER Y 153 -160.37 -160.58 REMARK 500 ASP Y 154 69.78 61.60 REMARK 500 ALA Y 156 61.44 61.99 REMARK 500 LEU Y 161 59.84 -95.64 REMARK 500 ARG Y 167 -99.32 49.88 REMARK 500 TYR Y 196 47.20 -91.05 REMARK 500 HIS Y 199 88.45 62.78 REMARK 500 THR Y 201 91.83 -59.14 REMARK 500 LYS Y 202 34.16 151.76 REMARK 500 GLU Y 203 67.27 179.95 REMARK 500 SER Y 204 30.71 134.99 REMARK 500 PRO Y 210 -71.15 -76.44 REMARK 500 ALA Y 212 -132.78 -84.65 REMARK 500 ILE Y 214 56.76 -107.78 REMARK 500 HIS Y 285 -15.88 68.73 REMARK 500 THR Y 286 -84.36 -99.13 REMARK 500 LYS Y 287 -30.37 -157.50 REMARK 500 GLN Y 310 48.73 -92.14 REMARK 500 LYS Y 311 -163.51 -172.19 REMARK 500 LYS Y 316 73.77 61.45 REMARK 500 ARG Y 335 46.90 -99.09 REMARK 500 ASN Y 339 -75.18 -119.60 REMARK 500 ASN Y 385 -71.13 -76.53 REMARK 500 ASP Y 388 -8.33 -141.96 REMARK 500 ALA Y 403 -11.05 71.74 REMARK 500 LYS Y 417 -73.91 -79.92 REMARK 500 ALA Y 449 46.42 -92.64 REMARK 500 ARG Y 450 -67.91 -121.89 REMARK 500 ASN Y 451 -17.32 -145.42 REMARK 500 ALA Y 455 -20.25 69.73 REMARK 500 GLU Y 474 66.91 -17.49 REMARK 500 LYS Y 482 49.73 -146.00 REMARK 500 REMARK 500 THIS ENTRY HAS 116 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG Y 976 0.22 SIDE CHAIN REMARK 500 ARG Y 977 0.12 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-8996 RELATED DB: EMDB REMARK 900 CASX-GRNA-DNA(45BP) STATE I DBREF1 6E79 Y 1 986 UNP A0A1F9IMA1_9DELT DBREF2 6E79 Y A0A1F9IMA1 1 986 DBREF 6E79 C -4 30 PDB 6E79 6E79 -4 30 DBREF 6E79 D 1 35 PDB 6E79 6E79 1 35 DBREF 6E79 B 2 122 PDB 6E79 6E79 2 122 SEQADV 6E79 ALA Y 672 UNP A0A1F9IMA ASP 672 CONFLICT SEQADV 6E79 ALA Y 769 UNP A0A1F9IMA GLU 769 CONFLICT SEQADV 6E79 TYR Y 862 UNP A0A1F9IMA GLY 862 CONFLICT SEQADV 6E79 ALA Y 935 UNP A0A1F9IMA ASP 935 CONFLICT SEQRES 1 Y 986 MET GLU LYS ARG ILE ASN LYS ILE ARG LYS LYS LEU SER SEQRES 2 Y 986 ALA ASP ASN ALA THR LYS PRO VAL SER ARG SER GLY PRO SEQRES 3 Y 986 MET LYS THR LEU LEU VAL ARG VAL MET THR ASP ASP LEU SEQRES 4 Y 986 LYS LYS ARG LEU GLU LYS ARG ARG LYS LYS PRO GLU VAL SEQRES 5 Y 986 MET PRO GLN VAL ILE SER ASN ASN ALA ALA ASN ASN LEU SEQRES 6 Y 986 ARG MET LEU LEU ASP ASP TYR THR LYS MET LYS GLU ALA SEQRES 7 Y 986 ILE LEU GLN VAL TYR TRP GLN GLU PHE LYS ASP ASP HIS SEQRES 8 Y 986 VAL GLY LEU MET CYS LYS PHE ALA GLN PRO ALA SER LYS SEQRES 9 Y 986 LYS ILE ASP GLN ASN LYS LEU LYS PRO GLU MET ASP GLU SEQRES 10 Y 986 LYS GLY ASN LEU THR THR ALA GLY PHE ALA CYS SER GLN SEQRES 11 Y 986 CYS GLY GLN PRO LEU PHE VAL TYR LYS LEU GLU GLN VAL SEQRES 12 Y 986 SER GLU LYS GLY LYS ALA TYR THR ASN TYR PHE GLY ARG SEQRES 13 Y 986 CYS ASN VAL ALA GLU HIS GLU LYS LEU ILE LEU LEU ALA SEQRES 14 Y 986 GLN LEU LYS PRO GLU LYS ASP SER ASP GLU ALA VAL THR SEQRES 15 Y 986 TYR SER LEU GLY LYS PHE GLY GLN ARG ALA LEU ASP PHE SEQRES 16 Y 986 TYR SER ILE HIS VAL THR LYS GLU SER THR HIS PRO VAL SEQRES 17 Y 986 LYS PRO LEU ALA GLN ILE ALA GLY ASN ARG TYR ALA SER SEQRES 18 Y 986 GLY PRO VAL GLY LYS ALA LEU SER ASP ALA CYS MET GLY SEQRES 19 Y 986 THR ILE ALA SER PHE LEU SER LYS TYR GLN ASP ILE ILE SEQRES 20 Y 986 ILE GLU HIS GLN LYS VAL VAL LYS GLY ASN GLN LYS ARG SEQRES 21 Y 986 LEU GLU SER LEU ARG GLU LEU ALA GLY LYS GLU ASN LEU SEQRES 22 Y 986 GLU TYR PRO SER VAL THR LEU PRO PRO GLN PRO HIS THR SEQRES 23 Y 986 LYS GLU GLY VAL ASP ALA TYR ASN GLU VAL ILE ALA ARG SEQRES 24 Y 986 VAL ARG MET TRP VAL ASN LEU ASN LEU TRP GLN LYS LEU SEQRES 25 Y 986 LYS LEU SER ARG ASP ASP ALA LYS PRO LEU LEU ARG LEU SEQRES 26 Y 986 LYS GLY PHE PRO SER PHE PRO VAL VAL GLU ARG ARG GLU SEQRES 27 Y 986 ASN GLU VAL ASP TRP TRP ASN THR ILE ASN GLU VAL LYS SEQRES 28 Y 986 LYS LEU ILE ASP ALA LYS ARG ASP MET GLY ARG VAL PHE SEQRES 29 Y 986 TRP SER GLY VAL THR ALA GLU LYS ARG ASN THR ILE LEU SEQRES 30 Y 986 GLU GLY TYR ASN TYR LEU PRO ASN GLU ASN ASP HIS LYS SEQRES 31 Y 986 LYS ARG GLU GLY SER LEU GLU ASN PRO LYS LYS PRO ALA SEQRES 32 Y 986 LYS ARG GLN PHE GLY ASP LEU LEU LEU TYR LEU GLU LYS SEQRES 33 Y 986 LYS TYR ALA GLY ASP TRP GLY LYS VAL PHE ASP GLU ALA SEQRES 34 Y 986 TRP GLU ARG ILE ASP LYS LYS ILE ALA GLY LEU THR SER SEQRES 35 Y 986 HIS ILE GLU ARG GLU GLU ALA ARG ASN ALA GLU ASP ALA SEQRES 36 Y 986 GLN SER LYS ALA VAL LEU THR ASP TRP LEU ARG ALA LYS SEQRES 37 Y 986 ALA SER PHE VAL LEU GLU ARG LEU LYS GLU MET ASP GLU SEQRES 38 Y 986 LYS GLU PHE TYR ALA CYS GLU ILE GLN LEU GLN LYS TRP SEQRES 39 Y 986 TYR GLY ASP LEU ARG GLY ASN PRO PHE ALA VAL GLU ALA SEQRES 40 Y 986 GLU ASN ARG VAL VAL ASP ILE SER GLY PHE SER ILE GLY SEQRES 41 Y 986 SER ASP GLY HIS SER ILE GLN TYR ARG ASN LEU LEU ALA SEQRES 42 Y 986 TRP LYS TYR LEU GLU ASN GLY LYS ARG GLU PHE TYR LEU SEQRES 43 Y 986 LEU MET ASN TYR GLY LYS LYS GLY ARG ILE ARG PHE THR SEQRES 44 Y 986 ASP GLY THR ASP ILE LYS LYS SER GLY LYS TRP GLN GLY SEQRES 45 Y 986 LEU LEU TYR GLY GLY GLY LYS ALA LYS VAL ILE ASP LEU SEQRES 46 Y 986 THR PHE ASP PRO ASP ASP GLU GLN LEU ILE ILE LEU PRO SEQRES 47 Y 986 LEU ALA PHE GLY THR ARG GLN GLY ARG GLU PHE ILE TRP SEQRES 48 Y 986 ASN ASP LEU LEU SER LEU GLU THR GLY LEU ILE LYS LEU SEQRES 49 Y 986 ALA ASN GLY ARG VAL ILE GLU LYS THR ILE TYR ASN LYS SEQRES 50 Y 986 LYS ILE GLY ARG ASP GLU PRO ALA LEU PHE VAL ALA LEU SEQRES 51 Y 986 THR PHE GLU ARG ARG GLU VAL VAL ASP PRO SER ASN ILE SEQRES 52 Y 986 LYS PRO VAL ASN LEU ILE GLY VAL ALA ARG GLY GLU ASN SEQRES 53 Y 986 ILE PRO ALA VAL ILE ALA LEU THR ASP PRO GLU GLY CYS SEQRES 54 Y 986 PRO LEU PRO GLU PHE LYS ASP SER SER GLY GLY PRO THR SEQRES 55 Y 986 ASP ILE LEU ARG ILE GLY GLU GLY TYR LYS GLU LYS GLN SEQRES 56 Y 986 ARG ALA ILE GLN ALA ALA LYS GLU VAL GLU GLN ARG ARG SEQRES 57 Y 986 ALA GLY GLY TYR SER ARG LYS PHE ALA SER LYS SER ARG SEQRES 58 Y 986 ASN LEU ALA ASP ASP MET VAL ARG ASN SER ALA ARG ASP SEQRES 59 Y 986 LEU PHE TYR HIS ALA VAL THR HIS ASP ALA VAL LEU VAL SEQRES 60 Y 986 PHE ALA ASN LEU SER ARG GLY PHE GLY ARG GLN GLY LYS SEQRES 61 Y 986 ARG THR PHE MET THR GLU ARG GLN TYR THR LYS MET GLU SEQRES 62 Y 986 ASP TRP LEU THR ALA LYS LEU ALA TYR GLU GLY LEU THR SEQRES 63 Y 986 SER LYS THR TYR LEU SER LYS THR LEU ALA GLN TYR THR SEQRES 64 Y 986 SER LYS THR CYS SER ASN CYS GLY PHE THR ILE THR THR SEQRES 65 Y 986 ALA ASP TYR ASP GLY MET LEU VAL ARG LEU LYS LYS THR SEQRES 66 Y 986 SER ASP GLY TRP ALA THR THR LEU ASN ASN LYS GLU LEU SEQRES 67 Y 986 LYS ALA GLU TYR GLN ILE THR TYR TYR ASN ARG TYR LYS SEQRES 68 Y 986 ARG GLN THR VAL GLU LYS GLU LEU SER ALA GLU LEU ASP SEQRES 69 Y 986 ARG LEU SER GLU GLU SER GLY ASN ASN ASP ILE SER LYS SEQRES 70 Y 986 TRP THR LYS GLY ARG ARG ASP GLU ALA LEU PHE LEU LEU SEQRES 71 Y 986 LYS LYS ARG PHE SER HIS ARG PRO VAL GLN GLU GLN PHE SEQRES 72 Y 986 VAL CYS LEU ASP CYS GLY HIS GLU VAL HIS ALA ALA GLU SEQRES 73 Y 986 GLN ALA ALA LEU ASN ILE ALA ARG SER TRP LEU PHE LEU SEQRES 74 Y 986 ASN SER ASN SER THR GLU PHE LYS SER TYR LYS SER GLY SEQRES 75 Y 986 LYS GLN PRO PHE VAL GLY ALA TRP GLN ALA PHE TYR LYS SEQRES 76 Y 986 ARG ARG LEU LYS GLU VAL TRP LYS PRO ASN ALA SEQRES 1 C 35 DT DA DT DA DA DT DT DT DG DA DG DC DG SEQRES 2 C 35 DC DA DC DC DT DA DA DT DT DT DC DC DT SEQRES 3 C 35 DG DA DA DA DT DC DC DC DG SEQRES 1 D 35 DC DG DG DG DA DT DT DT DC DA DT DC DC SEQRES 2 D 35 DT DG DC DA DG DC DA DT DC DC DC DC DG SEQRES 3 D 35 DA DC DC DC DG DT DA DT DA SEQRES 1 B 112 G C G C G U U U A U U C C SEQRES 2 B 112 A U C U U U G G A G C C A SEQRES 3 B 112 G U C C C A G C G A C U A SEQRES 4 B 112 U G U C G U A U G G A C G SEQRES 5 B 112 A A G C G C U U A U U U A SEQRES 6 B 112 U C G G C C G A U A A G U SEQRES 7 B 112 A A A A C G C A U C A A A SEQRES 8 B 112 G U G C U G C A G C A G A SEQRES 9 B 112 A A A U C A A A HELIX 1 AA1 ILE Y 8 SER Y 13 1 6 HELIX 2 AA2 ASP Y 37 ARG Y 42 1 6 HELIX 3 AA3 ASN Y 60 ASP Y 90 1 31 HELIX 4 AA4 ASP Y 90 PHE Y 98 1 9 HELIX 5 AA5 GLY Y 222 LYS Y 259 1 38 HELIX 6 AA6 LYS Y 287 TRP Y 309 1 23 HELIX 7 AA7 ASP Y 342 LYS Y 357 1 16 HELIX 8 AA8 ASP Y 359 TRP Y 365 1 7 HELIX 9 AA9 LYS Y 372 TYR Y 380 1 9 HELIX 10 AB1 ARG Y 405 LYS Y 417 1 13 HELIX 11 AB2 LYS Y 424 ALA Y 449 1 26 HELIX 12 AB3 ALA Y 455 LEU Y 473 1 19 HELIX 13 AB4 TYR Y 485 ASN Y 501 1 17 HELIX 14 AB5 GLY Y 602 PHE Y 609 1 8 HELIX 15 AB6 TYR Y 711 ARG Y 728 1 18 HELIX 16 AB7 SER Y 738 HIS Y 762 1 25 HELIX 17 AB8 THR Y 790 TYR Y 802 1 13 HELIX 18 AB9 ARG Y 869 LYS Y 877 1 9 HELIX 19 AC1 LYS Y 897 GLY Y 901 5 5 HELIX 20 AC2 ALA Y 906 PHE Y 914 1 9 HELIX 21 AC3 ALA Y 935 LEU Y 940 1 6 HELIX 22 AC4 ASN Y 941 TRP Y 946 1 6 HELIX 23 AC5 THR Y 954 SER Y 958 5 5 HELIX 24 AC6 PRO Y 965 ALA Y 972 1 8 HELIX 25 AC7 TYR Y 974 TRP Y 982 1 9 SHEET 1 AA1 2 THR Y 18 PRO Y 20 0 SHEET 2 AA1 2 GLU Y 656 VAL Y 658 -1 O VAL Y 657 N LYS Y 19 SHEET 1 AA2 3 MET Y 27 LYS Y 28 0 SHEET 2 AA2 3 THR Y 651 ARG Y 654 -1 O PHE Y 652 N LYS Y 28 SHEET 3 AA2 3 ILE Y 622 ASN Y 626 -1 N LYS Y 623 O GLU Y 653 SHEET 1 AA3 2 VAL Y 511 ASP Y 513 0 SHEET 2 AA3 2 ARG Y 628 ILE Y 630 -1 O VAL Y 629 N VAL Y 512 SHEET 1 AA4 3 ASN Y 530 LEU Y 531 0 SHEET 2 AA4 3 LEU Y 547 MET Y 548 -1 O LEU Y 547 N LEU Y 531 SHEET 3 AA4 3 ILE Y 595 ILE Y 596 -1 O ILE Y 595 N MET Y 548 SHEET 1 AA5 2 ARG Y 557 PHE Y 558 0 SHEET 2 AA5 2 LEU Y 585 THR Y 586 -1 O THR Y 586 N ARG Y 557 SHEET 1 AA6 2 GLY Y 670 ALA Y 672 0 SHEET 2 AA6 2 VAL Y 680 ALA Y 682 -1 O VAL Y 680 N ALA Y 672 SHEET 1 AA7 2 LEU Y 766 ALA Y 769 0 SHEET 2 AA7 2 LEU Y 811 THR Y 814 1 O SER Y 812 N PHE Y 768 SHEET 1 AA8 2 PHE Y 923 VAL Y 924 0 SHEET 2 AA8 2 GLU Y 931 VAL Y 932 -1 O VAL Y 932 N PHE Y 923 SSBOND 1 CYS Y 826 CYS Y 928 1555 1555 2.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004340 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004340 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004340 0.00000